mm9_v1_chr8_+_56040211_56040342	224.941	HOX{A6,A7,B6,B7}.p2	BC043130|Gpm6a|234267|glycoprotein m6a	AK147245|Gpm6a|234267|glycoprotein m6a	AK147280|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_+_56040445_56040534	216.821	HOX{A6,A7,B6,B7}.p2	BC029683|Gpm6a|234267|glycoprotein m6a	BC033357|Gpm6a|234267|glycoprotein m6a	AK053538|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_+_56040553_56040581	199.388	HOX{A6,A7,B6,B7}.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_+_56040080_56040120	187.589	HOX{A6,A7,B6,B7}.p2	NM_153581|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_+_56040193_56040201	183.387	HOX{A6,A7,B6,B7}.p2	AK081877|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr13_+_42776161_42776182	131.633	HOX{A6,A7,B6,B7}.p2	AK047654|Phactr1|218194|phosphatase and actin regulator 1	AY993932|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr3_+_68376319_68376428	111.527	HOX{A6,A7,B6,B7}.p2	BC060529|Schip1|30953|schwannomin interacting protein 1	AK021361|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr10_+_69487700_69487703	110.8	HOX{A6,A7,B6,B7}.p2	AK033919|Ank3|11735|ankyrin 3, epithelial	AK036171|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr17_-_90487479_90487653	109.531	HOX{A6,A7,B6,B7}.p2	AK032032|Nrxn1|18189|neurexin I
mm9_v1_chr16_+_7069971_7070091	108.774	HOX{A6,A7,B6,B7}.p2	AY659956|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AY659957|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AY659958|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr11_-_30000031_30000152	101.099	HOX{A6,A7,B6,B7}.p2	AK079934|Spnb2|20742|spectrin beta 2
mm9_v1_chr3_+_67696141_67696177	100.219	HOX{A6,A7,B6,B7}.p2	AK052136|Iqcj|208426|IQ motif containing J	NM_001113419|Iqcj-schip1|100505386|IQ motif containing J-schwannomin interacting protein 1 read-through transcript	NM_177585|Iqcj|208426|IQ motif containing J	BC107305|Iqcj|208426|IQ motif containing J	BC107306|Iqcj|208426|IQ motif containing J
mm9_v1_chr3_+_17695743_17695745	99.0312	HOX{A6,A7,B6,B7}.p2	AK046405|6430547I21Rik|320521|RIKEN cDNA 6430547I21 gene	AK032443|6430547I21Rik|320521|RIKEN cDNA 6430547I21 gene
mm9_v1_chrX_+_10173557_10173565	98.9941	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_+_42775991_42775991	98.4174	HOX{A6,A7,B6,B7}.p2	NM_198419|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr9_-_91255831_91255857	95.0845	HOX{A6,A7,B6,B7}.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chrX_+_54032914_54032920	93.8257	HOX{A6,A7,B6,B7}.p2	BC029024|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chrX_+_132424640_132424733	93.6235	HOX{A6,A7,B6,B7}.p2	AK214737|Bhlhb9|70237|basic helix-loop-helix domain containing, class B9
mm9_v1_chr14_+_28689289_28689352	93.3423	HOX{A6,A7,B6,B7}.p2	AK122265|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2
mm9_v1_chr16_+_7069927_7069947	92.902	HOX{A6,A7,B6,B7}.p2	AF191501|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_183188|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr14_-_94287950_94288026	90.7676	HOX{A6,A7,B6,B7}.p2	NM_001081377|Pcdh9|211712|protocadherin 9	BC157952|Pcdh9|211712|protocadherin 9	BC172098|Pcdh9|211712|protocadherin 9	BC158114|Pcdh9|211712|protocadherin 9	BC158117|Pcdh9|211712|protocadherin 9
mm9_v1_chrX_+_54032858_54032889	89.5465	HOX{A6,A7,B6,B7}.p2	NM_001077362|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chrX_-_100381973_100382006	84.5475	HOX{A6,A7,B6,B7}.p2	X92352|Nap1l2|17954|nucleosome assembly protein 1-like 2	NM_008671|Nap1l2|17954|nucleosome assembly protein 1-like 2
mm9_v1_chr3_+_68376289_68376313	84.224	HOX{A6,A7,B6,B7}.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr12_+_30219769_30219800	83.1516	HOX{A6,A7,B6,B7}.p2	AK036205|Myt1l|17933|myelin transcription factor 1-like	NM_001093776|Myt1l|17933|myelin transcription factor 1-like	BC079651|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chrX_-_100381703_100381961	82.399	HOX{A6,A7,B6,B7}.p2	BC115708|Nap1l2|17954|nucleosome assembly protein 1-like 2	BC115761|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK051439|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK131621|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK077430|Nap1l2|17954|nucleosome assembly protein 1-like 2
mm9_v1_chr10_+_40657980_40658124	81.5234	HOX{A6,A7,B6,B7}.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr15_+_91991704_91991862	79.5348	HOX{A6,A7,B6,B7}.p2	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chr5_-_122907002_122907003	78.475	HOX{A6,A7,B6,B7}.p2	AK134659|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr15_-_90764873_90764944	77.8338	HOX{A6,A7,B6,B7}.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chr4_+_101180625_101180708	76.0787	HOX{A6,A7,B6,B7}.p2	AK147570|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK147637|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr3_+_13946371_13946410	75.9253	HOX{A6,A7,B6,B7}.p2	NM_001163329|Ralyl|76897|RALY RNA binding protein-like	NM_001163330|Ralyl|76897|RALY RNA binding protein-like	AK038465|Ralyl|76897|RALY RNA binding protein-like	BC052358|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr10_-_31410391_31410392	74.9163	HOX{A6,A7,B6,B7}.p2	AK018248|Nkain2|432450|Na+/K+ transporting ATPase interacting 2
mm9_v1_chr10_+_90038471_90038471	73.9301	HOX{A6,A7,B6,B7}.p2	BC098373|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177397|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr18_-_25637786_25637794	72.1732	HOX{A6,A7,B6,B7}.p2	AK078071|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr5_-_122906470_122906515	70.2162	HOX{A6,A7,B6,B7}.p2	AK081191|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr16_-_42340613_42340763	69.9439	HOX{A6,A7,B6,B7}.p2	AK031908|Gap43|14432|growth associated protein 43	BC080758|Gap43|14432|growth associated protein 43	BC028288|Gap43|14432|growth associated protein 43	NM_008083|Gap43|14432|growth associated protein 43
mm9_v1_chr1_-_79436564_79436664	69.9337	HOX{A6,A7,B6,B7}.p2	BC048249|Scg2|20254|secretogranin II	BC014717|Scg2|20254|secretogranin II	NM_009129|Scg2|20254|secretogranin II
mm9_v1_chr11_-_41814008_41814185	69.5505	HOX{A6,A7,B6,B7}.p2	M86572|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	BC031762|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	M62374|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_008073|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK034338|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr18_+_82754829_82754843	69.4128	HOX{A6,A7,B6,B7}.p2	AK193989|Mbp|17196|myelin basic protein	AK198113|Mbp|17196|myelin basic protein	AK200233|Mbp|17196|myelin basic protein	AK200632|Mbp|17196|myelin basic protein	AK201435|Mbp|17196|myelin basic protein	AK201834|Mbp|17196|myelin basic protein	AK202354|Mbp|17196|myelin basic protein	AK209511|Mbp|17196|myelin basic protein
mm9_v1_chr9_-_112090150_112090479	69.1364	HOX{A6,A7,B6,B7}.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr4_+_138012860_138012969	68.7537	HOX{A6,A7,B6,B7}.p2	AK021100|Camk2n1|66259|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm9_v1_chr8_+_56122680_56122847	68.5843	HOX{A6,A7,B6,B7}.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr6_-_13785233_13785235	67.3773	HOX{A6,A7,B6,B7}.p2	AK013598|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr14_-_109313298_109313300	67.3255	HOX{A6,A7,B6,B7}.p2	AK144290|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr18_-_42900793_42900846	66.9879	HOX{A6,A7,B6,B7}.p2	AF512670|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr18_+_82754586_82754645	66.9138	HOX{A6,A7,B6,B7}.p2	AK194642|Mbp|17196|myelin basic protein
mm9_v1_chr18_-_25637339_25637341	66.8427	HOX{A6,A7,B6,B7}.p2	AK038871|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr18_-_12914177_12914270	66.7851	HOX{A6,A7,B6,B7}.p2	AK209493|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr12_+_110782654_110782752	66.1776	HOX{A6,A7,B6,B7}.p2	BC024818|Meg3|17263|maternally expressed 3
mm9_v1_chr14_-_109313333_109313374	66.1364	HOX{A6,A7,B6,B7}.p2	AK173296|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr15_+_18750083_18750083	65.9407	HOX{A6,A7,B6,B7}.p2	AK138606|Cdh10|320873|cadherin 10	NM_009865|Cdh10|320873|cadherin 10
mm9_v1_chr2_-_140485267_140485302	65.6312	HOX{A6,A7,B6,B7}.p2	AK017456|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr16_-_84955086_84955166	65.2251	HOX{A6,A7,B6,B7}.p2	AK190928|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr9_-_29770699_29770842	64.1379	HOX{A6,A7,B6,B7}.p2	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr18_+_82754377_82754564	63.3672	HOX{A6,A7,B6,B7}.p2	AK002947|Mbp|17196|myelin basic protein	AK203705|Mbp|17196|myelin basic protein	AK194025|Mbp|17196|myelin basic protein
mm9_v1_chr11_-_41813792_41813857	62.9143	HOX{A6,A7,B6,B7}.p2	AK047085|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK136889|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_177408|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233775|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233776|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233777|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233778|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233779|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233780|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233781|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233782|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233783|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233784|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233785|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233786|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233787|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233788|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233789|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233790|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233791|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233792|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233793|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233794|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233795|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233796|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233797|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233798|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233799|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233800|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233801|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233802|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK141129|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK049857|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr1_-_170085342_170085390	61.0432	HOX{A6,A7,B6,B7}.p2	AK083616|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr19_+_23241546_23241602	60.9178	HOX{A6,A7,B6,B7}.p2	AK009928|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr6_-_13789847_13789902	57.8842	HOX{A6,A7,B6,B7}.p2	BC065154|Gpr85|64450|G protein-coupled receptor 85	NM_145066|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr5_+_19413335_19413335	55.7736	HOX{A6,A7,B6,B7}.p2	AK147530|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_001170745|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_015823|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm9_v1_chr5_-_49280703_49280795	55.494	HOX{A6,A7,B6,B7}.p2	AF453243|Kcnip4|80334|Kv channel interacting protein 4	AK165773|Kcnip4|80334|Kv channel interacting protein 4	AK049662|Kcnip4|80334|Kv channel interacting protein 4	DQ148503|Kcnip4|80334|Kv channel interacting protein 4	AK039048|Kcnip4|80334|Kv channel interacting protein 4	NM_030265|Kcnip4|80334|Kv channel interacting protein 4
mm9_v1_chr1_+_66368571_66368671	55.1936	HOX{A6,A7,B6,B7}.p2	AK046341|Mtap2|17756|microtubule-associated protein 2	AK086484|Mtap2|17756|microtubule-associated protein 2	M21041|Mtap2|17756|microtubule-associated protein 2	AK141458|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr3_+_17954324_17954405	55.1791	HOX{A6,A7,B6,B7}.p2	BC053007|Bhlhe22|59058|basic helix-loop-helix family, member e22	NM_021560|Bhlhe22|59058|basic helix-loop-helix family, member e22	AK076228|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr8_-_55804030_55804031	54.4128	HOX{A6,A7,B6,B7}.p2	NM_028220|Wdr17|244484|WD repeat domain 17	BC028268|Wdr17|244484|WD repeat domain 17
mm9_v1_chr9_-_55983967_55984081	54.1222	HOX{A6,A7,B6,B7}.p2	AK212733|Tspan3|56434|tetraspanin 3	AK206202|Tspan3|56434|tetraspanin 3	AK211000|Tspan3|56434|tetraspanin 3	AK216580|Tspan3|56434|tetraspanin 3	AK219763|Tspan3|56434|tetraspanin 3	AK219867|Tspan3|56434|tetraspanin 3	AK206891|Tspan3|56434|tetraspanin 3	AK219936|Tspan3|56434|tetraspanin 3
mm9_v1_chr4_-_109960078_109960115	53.7272	HOX{A6,A7,B6,B7}.p2	BC052451|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AF041342|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK079088|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001038698|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr3_+_8509479_8509599	52.9988	HOX{A6,A7,B6,B7}.p2	AK149212|Stmn2|20257|stathmin-like 2	AK043202|Stmn2|20257|stathmin-like 2	AK003659|Stmn2|20257|stathmin-like 2	AK013020|Stmn2|20257|stathmin-like 2	NM_025285|Stmn2|20257|stathmin-like 2	BC026538|Stmn2|20257|stathmin-like 2
mm9_v1_chr1_-_166368439_166368560	52.2874	HOX{A6,A7,B6,B7}.p2	EF437334|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr14_+_14286471_14286627	51.612	HOX{A6,A7,B6,B7}.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr3_-_83967952_83967954	51.6117	HOX{A6,A7,B6,B7}.p2	AK054540|Trim2|80890|tripartite motif-containing 2
mm9_v1_chr5_-_51848420_51848454	51.3474	HOX{A6,A7,B6,B7}.p2	AK032149|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK082685|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK043827|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr3_-_63654912_63654960	51.2395	HOX{A6,A7,B6,B7}.p2	AY691172|Plch1|269437|phospholipase C, eta 1	AY691173|Plch1|269437|phospholipase C, eta 1	AY691174|Plch1|269437|phospholipase C, eta 1	NM_001177732|Plch1|269437|phospholipase C, eta 1	NM_001177733|Plch1|269437|phospholipase C, eta 1	NM_183191|Plch1|269437|phospholipase C, eta 1	BC055005|Plch1|269437|phospholipase C, eta 1
mm9_v1_chr15_-_8660729_8660806	50.2049	HOX{A6,A7,B6,B7}.p2	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr15_-_37389073_37389150	49.865	HOX{A6,A7,B6,B7}.p2	BC026979|Ncald|52589|neurocalcin delta	AK167313|Ncald|52589|neurocalcin delta	AK034031|Ncald|52589|neurocalcin delta	NM_001170867|Ncald|52589|neurocalcin delta	NM_001170868|Ncald|52589|neurocalcin delta
mm9_v1_chrX_-_40627962_40627962	49.7332	HOX{A6,A7,B6,B7}.p2	AB025410|Odz1|23963|odd Oz/ten-m homolog 1 (Drosophila)	NM_011855|Odz1|23963|odd Oz/ten-m homolog 1 (Drosophila)
mm9_v1_chr2_-_57905140_57905276	49.5138	HOX{A6,A7,B6,B7}.p2	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr15_-_44584003_44584003	49.2436	HOX{A6,A7,B6,B7}.p2	AB232449|Sybu|319613|syntabulin (syntaxin-interacting)	BC065045|Sybu|319613|syntabulin (syntaxin-interacting)	NM_178765|Sybu|319613|syntabulin (syntaxin-interacting)
mm9_v1_chr11_-_97372344_97372370	49.0948	HOX{A6,A7,B6,B7}.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr8_-_47292973_47292977	49.0728	HOX{A6,A7,B6,B7}.p2	AK186988|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm9_v1_chr3_+_114783882_114783882	47.5046	HOX{A6,A7,B6,B7}.p2	AF442824|Olfm3|229759|olfactomedin 3	NM_153157|Olfm3|229759|olfactomedin 3
mm9_v1_chr12_+_118997623_118997625	47.4244	HOX{A6,A7,B6,B7}.p2	AK134824|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr19_+_38339167_38339370	47.2918	HOX{A6,A7,B6,B7}.p2	AK045443|Lgi1|56839|leucine-rich repeat LGI family, member 1	BC066090|Lgi1|56839|leucine-rich repeat LGI family, member 1	NM_020278|Lgi1|56839|leucine-rich repeat LGI family, member 1	AF246818|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK035873|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK031996|Lgi1|56839|leucine-rich repeat LGI family, member 1
mm9_v1_chr3_+_55265654_55265683	47.085	HOX{A6,A7,B6,B7}.p2	NM_001111051|Dclk1|13175|doublecortin-like kinase 1	NM_001111052|Dclk1|13175|doublecortin-like kinase 1	NM_001195539|Dclk1|13175|doublecortin-like kinase 1	NM_001195540|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr5_+_67067359_67067456	47.073	HOX{A6,A7,B6,B7}.p2	NM_011670|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr16_+_7409879_7410026	46.7888	HOX{A6,A7,B6,B7}.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr9_+_31923720_31923720	46.2888	HOX{A6,A7,B6,B7}.p2	NM_001195632|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr16_+_92086695_92086827	45.8079	HOX{A6,A7,B6,B7}.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr17_+_70871444_70871503	45.7434	HOX{A6,A7,B6,B7}.p2	NM_001128180|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK161941|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK163689|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr18_-_31606908_31607087	45.614	HOX{A6,A7,B6,B7}.p2	BC052738|Syt4|20983|synaptotagmin IV	BC058208|Syt4|20983|synaptotagmin IV	AK050515|Syt4|20983|synaptotagmin IV	AK220264|Syt4|20983|synaptotagmin IV	AK148681|Syt4|20983|synaptotagmin IV	AK043985|Syt4|20983|synaptotagmin IV	AK083960|Syt4|20983|synaptotagmin IV	AK032106|Syt4|20983|synaptotagmin IV	NM_009308|Syt4|20983|synaptotagmin IV
mm9_v1_chrX_+_102318792_102318798	45.5081	HOX{A6,A7,B6,B7}.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr10_+_4978808_4978917	45.1184	HOX{A6,A7,B6,B7}.p2	AK148504|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr2_+_109532592_109532697	44.907	HOX{A6,A7,B6,B7}.p2	AY057913|Bdnf|12064|brain derived neurotrophic factor	EF125673|Bdnf|12064|brain derived neurotrophic factor	NM_001048141|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr6_-_92431385_92431385	44.8915	HOX{A6,A7,B6,B7}.p2	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr12_+_110834872_110834878	44.8758	HOX{A6,A7,B6,B7}.p2	AK038654|1110006E14Rik|76286|RIKEN cDNA 1110006E14 gene
mm9_v1_chr8_+_115093942_115094124	44.6746	HOX{A6,A7,B6,B7}.p2	BC034628|Cntnap4|170571|contactin associated protein-like 4	NM_130457|Cntnap4|170571|contactin associated protein-like 4	AK142816|Cntnap4|170571|contactin associated protein-like 4	AK081891|Cntnap4|170571|contactin associated protein-like 4	AK053611|Cntnap4|170571|contactin associated protein-like 4	AK042607|Cntnap4|170571|contactin associated protein-like 4	AK173255|Cntnap4|170571|contactin associated protein-like 4	AF333770|Cntnap4|170571|contactin associated protein-like 4
mm9_v1_chr18_+_37925619_37925770	44.5065	HOX{A6,A7,B6,B7}.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr2_+_138104219_138104260	44.4894	HOX{A6,A7,B6,B7}.p2	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr19_-_37250472_37250552	44.4799	HOX{A6,A7,B6,B7}.p2	AK147243|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr12_+_110800212_110800261	44.4717	HOX{A6,A7,B6,B7}.p2	AK018142|Meg3|17263|maternally expressed 3
mm9_v1_chr12_+_91570569_91570694	44.2725	HOX{A6,A7,B6,B7}.p2	AJ006804|Nrxn3|18191|neurexin III
mm9_v1_chrX_+_139997806_139997811	44.0525	HOX{A6,A7,B6,B7}.p2	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr4_-_76240202_76240202	43.8973	HOX{A6,A7,B6,B7}.p2	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr2_+_61884596_61884650	43.8682	HOX{A6,A7,B6,B7}.p2	AK043017|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	NM_033552|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AK220501|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	HM149278|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	BC039226|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AB033759|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
mm9_v1_chr12_+_30213224_30213265	43.364	HOX{A6,A7,B6,B7}.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr8_-_87297283_87297318	42.9278	HOX{A6,A7,B6,B7}.p2	BC090626|Nfix|18032|nuclear factor I/X
mm9_v1_chr4_-_91066674_91066674	42.5999	HOX{A6,A7,B6,B7}.p2	BC049125|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	BC058393|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207685|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr12_+_39510297_39510297	42.5451	HOX{A6,A7,B6,B7}.p2	AK032224|Etv1|14009|ets variant gene 1	NM_001163154|Etv1|14009|ets variant gene 1
mm9_v1_chr15_+_81626455_81626512	42.5365	HOX{A6,A7,B6,B7}.p2	AJ223207|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr8_-_47292863_47292905	42.4651	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_107422781_107422864	42.369	HOX{A6,A7,B6,B7}.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr17_+_70871393_70871416	42.3266	HOX{A6,A7,B6,B7}.p2	AK036307|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr16_+_43247396_43247452	42.2948	HOX{A6,A7,B6,B7}.p2	AK005028|Zbtb20|56490|zinc finger and BTB domain containing 20	NM_019778|Zbtb20|56490|zinc finger and BTB domain containing 20	NM_181058|Zbtb20|56490|zinc finger and BTB domain containing 20	BC031114|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr16_-_84955488_84955582	42.1564	HOX{A6,A7,B6,B7}.p2	AK190067|App|11820|amyloid beta (A4) precursor protein	AK194558|App|11820|amyloid beta (A4) precursor protein	AK213784|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr3_+_55265811_55265928	42.1127	HOX{A6,A7,B6,B7}.p2	AF155821|Dclk1|13175|doublecortin-like kinase 1	AK032424|Dclk1|13175|doublecortin-like kinase 1	AK081200|Dclk1|13175|doublecortin-like kinase 1	AB073969|Dclk1|13175|doublecortin-like kinase 1	AK047716|Dclk1|13175|doublecortin-like kinase 1	AY968047|Dclk1|13175|doublecortin-like kinase 1	AY968048|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chrX_+_155897136_155897153	41.9849	HOX{A6,A7,B6,B7}.p2	AK005554|Mtap7d2|78283|MAP7 domain containing 2	AK030316|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr15_-_8660479_8660490	41.4944	HOX{A6,A7,B6,B7}.p2	AK045949|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK080879|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr10_+_98486068_98486102	41.1731	HOX{A6,A7,B6,B7}.p2	AK136761|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr14_+_13073221_13073222	41.0917	HOX{A6,A7,B6,B7}.p2	AK134814|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr13_+_59234737_59234835	40.272	HOX{A6,A7,B6,B7}.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr4_-_109959185_109959241	40.1144	HOX{A6,A7,B6,B7}.p2	D31953|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK014133|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	DQ437511|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr10_-_116782524_116782604	40.0514	HOX{A6,A7,B6,B7}.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr17_-_85461840_85461859	40.038	HOX{A6,A7,B6,B7}.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr3_-_122241909_122241984	39.9696	HOX{A6,A7,B6,B7}.p2	AK019185|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr3_+_136598184_136598389	39.9487	HOX{A6,A7,B6,B7}.p2	AK218972|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK179617|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK145309|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr10_+_69488049_69488073	39.7978	HOX{A6,A7,B6,B7}.p2	AK013684|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr11_-_73137838_73138062	39.7747	HOX{A6,A7,B6,B7}.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr8_-_67071497_67071512	39.7302	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_136598485_136598597	39.3495	HOX{A6,A7,B6,B7}.p2	AK053582|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr9_-_83003967_83004006	39.212	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_122907269_122907331	39.0209	HOX{A6,A7,B6,B7}.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr2_+_59192308_59192366	38.9512	HOX{A6,A7,B6,B7}.p2	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr1_-_42749940_42749978	38.8845	HOX{A6,A7,B6,B7}.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr18_+_37834003_37834149	38.8248	HOX{A6,A7,B6,B7}.p2	AY013797|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr11_-_79317471_79317554	38.5863	HOX{A6,A7,B6,B7}.p2	BC024757|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr14_-_109313447_109313461	38.554	HOX{A6,A7,B6,B7}.p2	NM_199065|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr11_-_79317583_79317590	38.0265	HOX{A6,A7,B6,B7}.p2	NM_019409|Omg|18377|oligodendrocyte myelin glycoprotein	AK136910|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr9_+_75159201_75159201	38.0254	HOX{A6,A7,B6,B7}.p2	NM_010313|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	U69145|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr3_-_126701367_126701380	37.7378	HOX{A6,A7,B6,B7}.p2	AK032060|Ank2|109676|ankyrin 2, brain	NM_178655|Ank2|109676|ankyrin 2, brain
mm9_v1_chr9_-_112134930_112134962	37.5064	HOX{A6,A7,B6,B7}.p2	AK032417|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr12_+_110783786_110783839	37.3902	HOX{A6,A7,B6,B7}.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr13_+_42961598_42961632	37.3775	HOX{A6,A7,B6,B7}.p2	AK139452|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr10_+_4978047_4978054	37.1344	HOX{A6,A7,B6,B7}.p2	AK122550|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr9_-_112134984_112135004	36.9817	HOX{A6,A7,B6,B7}.p2	NM_001177616|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr15_-_8660462_8660476	36.9797	HOX{A6,A7,B6,B7}.p2	AK031831|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK040798|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK049090|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK082736|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75377|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr11_-_69648350_69648356	36.8991	HOX{A6,A7,B6,B7}.p2	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr2_+_97307652_97307938	36.799	HOX{A6,A7,B6,B7}.p2	AK032467|Lrrc4c|241568|leucine rich repeat containing 4C	AK032088|Lrrc4c|241568|leucine rich repeat containing 4C	NM_178725|Lrrc4c|241568|leucine rich repeat containing 4C	BC094588|Lrrc4c|241568|leucine rich repeat containing 4C
mm9_v1_chr11_+_117623703_117623821	36.7484	HOX{A6,A7,B6,B7}.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr15_-_8660442_8660451	36.7435	HOX{A6,A7,B6,B7}.p2	AK084968|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr9_+_57810230_57810233	36.6351	HOX{A6,A7,B6,B7}.p2	AK019344|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm9_v1_chr19_+_10525829_10525836	36.5614	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr17_+_71168939_71168940	36.1437	HOX{A6,A7,B6,B7}.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr2_-_77357674_77357722	35.566	HOX{A6,A7,B6,B7}.p2	AK078551|Zfp385b|241494|zinc finger protein 385B	AK050293|Zfp385b|241494|zinc finger protein 385B	NM_001113400|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr18_+_57628139_57628180	35.2797	HOX{A6,A7,B6,B7}.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr7_+_107789414_107789679	35.0508	HOX{A6,A7,B6,B7}.p2	AK191812|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr1_-_134603848_134603902	34.9759	HOX{A6,A7,B6,B7}.p2	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr18_+_38476622_38476661	34.6313	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_82753560_82753917	34.5243	HOX{A6,A7,B6,B7}.p2	AK205832|Mbp|17196|myelin basic protein	AK195683|Mbp|17196|myelin basic protein	AK198099|Mbp|17196|myelin basic protein
mm9_v1_chr10_-_63552994_63553028	34.3352	HOX{A6,A7,B6,B7}.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chrX_+_162782484_162782852	34.0812	HOX{A6,A7,B6,B7}.p2	NM_001177955|Gpm6b|14758|glycoprotein m6b	NM_001177956|Gpm6b|14758|glycoprotein m6b	NM_001177957|Gpm6b|14758|glycoprotein m6b	NM_001177958|Gpm6b|14758|glycoprotein m6b	NM_001177959|Gpm6b|14758|glycoprotein m6b	NM_001177960|Gpm6b|14758|glycoprotein m6b	AF254869|Gpm6b|14758|glycoprotein m6b	AF254870|Gpm6b|14758|glycoprotein m6b	AF254872|Gpm6b|14758|glycoprotein m6b	AF254873|Gpm6b|14758|glycoprotein m6b	AF254874|Gpm6b|14758|glycoprotein m6b	AF254875|Gpm6b|14758|glycoprotein m6b	AF254878|Gpm6b|14758|glycoprotein m6b	AF254879|Gpm6b|14758|glycoprotein m6b	AK013660|Gpm6b|14758|glycoprotein m6b	AK140714|Gpm6b|14758|glycoprotein m6b	S65737|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr2_+_174171943_174171964	34.0766	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_87032504_87032509	33.9976	HOX{A6,A7,B6,B7}.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr14_+_120830603_120830641	33.8755	HOX{A6,A7,B6,B7}.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr4_+_101180580_101180604	33.6477	HOX{A6,A7,B6,B7}.p2	NM_001164584|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164585|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK030374|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK122293|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr1_+_34364633_34364780	33.4516	HOX{A6,A7,B6,B7}.p2	AK009079|Dst|13518|dystonin
mm9_v1_chr2_-_79969095_79969127	33.3828	HOX{A6,A7,B6,B7}.p2	BC090628|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK043647|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_016744|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr17_-_90436488_90436574	33.264	HOX{A6,A7,B6,B7}.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr17_+_17539832_17539856	33.2484	HOX{A6,A7,B6,B7}.p2	AK017685|Lix1|66643|limb expression 1 homolog (chicken)	AK012220|Lix1|66643|limb expression 1 homolog (chicken)	BC052700|Lix1|66643|limb expression 1 homolog (chicken)	BC063057|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr12_-_32398730_32398790	33.163	HOX{A6,A7,B6,B7}.p2	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr5_+_67067497_67067526	33.1283	HOX{A6,A7,B6,B7}.p2	BC039177|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AB025313|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AF172334|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr8_-_70342105_70342226	32.9494	HOX{A6,A7,B6,B7}.p2	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr3_+_55586431_55586482	32.728	HOX{A6,A7,B6,B7}.p2	NM_010750|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK043552|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF040945|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF228913|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK032114|Mab21l1|17116|mab-21-like 1 (C. elegans)	BC014750|Mab21l1|17116|mab-21-like 1 (C. elegans)
mm9_v1_chr5_+_67067477_67067482	32.4899	HOX{A6,A7,B6,B7}.p2	AK004066|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AK013729|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr18_+_37821598_37821598	32.3015	HOX{A6,A7,B6,B7}.p2	AY013792|Pcdhga1|93709|protocadherin gamma subfamily A, 1	NM_033584|Pcdhga1|93709|protocadherin gamma subfamily A, 1
mm9_v1_chr17_+_17539908_17539941	32.1398	HOX{A6,A7,B6,B7}.p2	AF351204|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr1_-_170085798_170085873	32.1123	HOX{A6,A7,B6,B7}.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr4_-_86873866_86873867	31.8837	HOX{A6,A7,B6,B7}.p2	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr19_-_7500486_7500496	31.8555	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_23573939_23573956	31.8192	HOX{A6,A7,B6,B7}.p2	BC040364|Dtna|13527|dystrobrevin alpha
mm9_v1_chr7_+_134094045_134094242	31.5283	HOX{A6,A7,B6,B7}.p2	AK034088|Sez6l2|233878|seizure related 6 homolog like 2	AK165738|Sez6l2|233878|seizure related 6 homolog like 2	BC096615|Sez6l2|233878|seizure related 6 homolog like 2	BC011475|Sez6l2|233878|seizure related 6 homolog like 2	NM_144926|Sez6l2|233878|seizure related 6 homolog like 2
mm9_v1_chr14_+_55506625_55506792	31.4949	HOX{A6,A7,B6,B7}.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr1_-_194677940_194677940	31.4348	HOX{A6,A7,B6,B7}.p2	NM_001177794|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr12_-_42212538_42212554	31.3268	HOX{A6,A7,B6,B7}.p2	AK036316|Lrrn3|16981|leucine rich repeat protein 3, neuronal	D49802|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chrM_+_11741_11742	31.0295	HOX{A6,A7,B6,B7}.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chr2_-_77541328_77541435	30.9854	HOX{A6,A7,B6,B7}.p2	BC048543|Zfp385b|241494|zinc finger protein 385B	NM_001113399|Zfp385b|241494|zinc finger protein 385B	AK047859|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr5_-_23012407_23012525	30.7523	HOX{A6,A7,B6,B7}.p2	AK044922|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK201776|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chrX_+_140100287_140100287	30.689	HOX{A6,A7,B6,B7}.p2	NM_001195049|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	U39738|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr2_-_115890747_115890848	30.6808	HOX{A6,A7,B6,B7}.p2	U68383|Meis2|17536|Meis homeobox 2	U68384|Meis2|17536|Meis homeobox 2	AJ000504|Meis2|17536|Meis homeobox 2	AJ000505|Meis2|17536|Meis homeobox 2	AJ000506|Meis2|17536|Meis homeobox 2	AJ000507|Meis2|17536|Meis homeobox 2	AK146633|Meis2|17536|Meis homeobox 2	NM_001136072|Meis2|17536|Meis homeobox 2	NM_001159567|Meis2|17536|Meis homeobox 2	NM_001159568|Meis2|17536|Meis homeobox 2	NM_010825|Meis2|17536|Meis homeobox 2	BC017375|Meis2|17536|Meis homeobox 2
mm9_v1_chrX_+_38754568_38754592	30.5898	HOX{A6,A7,B6,B7}.p2	AK138615|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr11_+_52202137_52202376	30.2905	HOX{A6,A7,B6,B7}.p2	AK217498|Vdac1|22333|voltage-dependent anion channel 1	AK210208|Vdac1|22333|voltage-dependent anion channel 1	AK215454|Vdac1|22333|voltage-dependent anion channel 1	AK207573|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr11_-_41996141_41996431	30.1266	HOX{A6,A7,B6,B7}.p2	AK141596|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK034095|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	NM_010250|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chrX_-_22797942_22797952	30.0487	HOX{A6,A7,B6,B7}.p2	AK013399|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chr8_-_37631532_37631612	29.7672	HOX{A6,A7,B6,B7}.p2	BC096052|Dlc1|50768|deleted in liver cancer 1	BC028562|Dlc1|50768|deleted in liver cancer 1	BC056230|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr3_-_146432922_146432972	29.673	HOX{A6,A7,B6,B7}.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr11_+_42234760_42234851	29.6469	HOX{A6,A7,B6,B7}.p2	U14419|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	AK034069|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	GU086167|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr10_+_90039435_90039495	29.5863	HOX{A6,A7,B6,B7}.p2	AK032211|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177396|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK163750|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK132228|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK019361|Ipw|16353|imprinted gene in the Prader-Willi syndrome region	AK049899|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr11_-_41995688_41995930	29.5099	HOX{A6,A7,B6,B7}.p2	X61430|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK039496|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	M86566|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr18_+_23573977_23574064	29.173	HOX{A6,A7,B6,B7}.p2	AF143543|Dtna|13527|dystrobrevin alpha	AK019477|Dtna|13527|dystrobrevin alpha	AK003829|Dtna|13527|dystrobrevin alpha	AF143542|Dtna|13527|dystrobrevin alpha	AF143544|Dtna|13527|dystrobrevin alpha
mm9_v1_chr4_-_109959366_109959438	29.1216	HOX{A6,A7,B6,B7}.p2	BC048159|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163399|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_010488|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr14_-_104213981_104213985	29.0746	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_-_100286521_100286556	28.9083	HOX{A6,A7,B6,B7}.p2	NM_008634|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr19_+_22767272_22767282	28.8476	HOX{A6,A7,B6,B7}.p2	AK053673|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK046908|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK077331|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK082141|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK142504|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK161909|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK163890|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr14_+_84933363_84933455	28.7758	HOX{A6,A7,B6,B7}.p2	AK045478|Pcdh17|219228|protocadherin 17	AK079626|Pcdh17|219228|protocadherin 17	AK046505|Pcdh17|219228|protocadherin 17	AK047338|Pcdh17|219228|protocadherin 17
mm9_v1_chr12_+_25741653_25741728	28.7119	HOX{A6,A7,B6,B7}.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr18_+_37866747_37866882	28.695	HOX{A6,A7,B6,B7}.p2	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr18_-_14002490_14002628	28.6885	HOX{A6,A7,B6,B7}.p2	BC023458|Zfp521|225207|zinc finger protein 521
mm9_v1_chr17_-_59130757_59130797	28.5682	HOX{A6,A7,B6,B7}.p2	BC034642|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene	BC033350|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene	NM_027001|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene
mm9_v1_chr18_+_23573908_23573935	28.4966	HOX{A6,A7,B6,B7}.p2	NM_010087|Dtna|13527|dystrobrevin alpha	NM_207650|Dtna|13527|dystrobrevin alpha
mm9_v1_chr3_-_95032039_95032230	28.3476	HOX{A6,A7,B6,B7}.p2	BC022963|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK046005|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	U95498|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AB000733|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK158495|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr7_-_107810868_107810907	28.2558	HOX{A6,A7,B6,B7}.p2	BC024756|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF000272|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF101053|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163182|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_013746|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr2_+_97306600_97306623	28.1946	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_29618531_29618569	28.1247	HOX{A6,A7,B6,B7}.p2	NM_024226|Rtn4|68585|reticulon 4	AY102283|Rtn4|68585|reticulon 4
mm9_v1_chr3_+_17954500_17954591	28.0816	HOX{A6,A7,B6,B7}.p2	AK047201|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr18_+_59222034_59222186	27.8978	HOX{A6,A7,B6,B7}.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chr13_-_115078961_115078988	27.819	HOX{A6,A7,B6,B7}.p2	AK035175|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr11_-_73138102_73138139	27.798	HOX{A6,A7,B6,B7}.p2	BC024934|Aspa|11484|aspartoacylase	AK002859|Aspa|11484|aspartoacylase	AK008354|Aspa|11484|aspartoacylase	NM_023113|Aspa|11484|aspartoacylase
mm9_v1_chr18_+_37663917_37664076	27.7106	HOX{A6,A7,B6,B7}.p2	AK045399|Pcdhb20|93891|protocadherin beta 20	NM_053145|Pcdhb20|93891|protocadherin beta 20	AK046137|Pcdhb20|93891|protocadherin beta 20	AF326313|Pcdhb20|93891|protocadherin beta 20	AK045527|Pcdhb20|93891|protocadherin beta 20	BC031895|Pcdhb20|93891|protocadherin beta 20	AY013782|Pcdhb20|93891|protocadherin beta 20
mm9_v1_chr2_+_131763454_131763725	27.5057	HOX{A6,A7,B6,B7}.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr3_-_80606500_80606592	27.4866	HOX{A6,A7,B6,B7}.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr9_-_26815760_26815835	27.274	HOX{A6,A7,B6,B7}.p2	AK210283|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr19_+_38598686_38598698	27.2085	HOX{A6,A7,B6,B7}.p2	AB076247|Plce1|74055|phospholipase C, epsilon 1	NM_019588|Plce1|74055|phospholipase C, epsilon 1	BC138349|Plce1|74055|phospholipase C, epsilon 1	BC138350|Plce1|74055|phospholipase C, epsilon 1	BC145246|Plce1|74055|phospholipase C, epsilon 1
mm9_v1_chr18_+_35966147_35966251	27.1354	HOX{A6,A7,B6,B7}.p2	AK075844|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr1_-_72905107_72905143	27.0791	HOX{A6,A7,B6,B7}.p2	AK011683|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr8_+_46593141_46593271	27.0722	HOX{A6,A7,B6,B7}.p2	AK171632|Sorbs2|234214|sorbin and SH3 domain containing 2	NM_172752|Sorbs2|234214|sorbin and SH3 domain containing 2	AK139388|Sorbs2|234214|sorbin and SH3 domain containing 2	BC151038|Sorbs2|234214|sorbin and SH3 domain containing 2	BC172140|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr9_+_72584532_72584702	27.0411	HOX{A6,A7,B6,B7}.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr9_+_111277323_111277357	26.9335	HOX{A6,A7,B6,B7}.p2	BC086653|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1
mm9_v1_chr10_+_20760625_20760625	26.9071	HOX{A6,A7,B6,B7}.p2	AK161335|Ahi1|52906|Abelson helper integration site 1	NM_001177776|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr6_+_104443037_104443047	26.8442	HOX{A6,A7,B6,B7}.p2	BC076594|Cntn6|53870|contactin 6	NM_017383|Cntn6|53870|contactin 6
mm9_v1_chr6_+_96063137_96063148	26.7852	HOX{A6,A7,B6,B7}.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr5_+_107926763_107926815	26.6647	HOX{A6,A7,B6,B7}.p2	AK043587|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001007574|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK043720|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK164388|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK169666|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001168557|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene
mm9_v1_chr7_+_31092787_31092817	26.5809	HOX{A6,A7,B6,B7}.p2	BC058124|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr8_-_70498472_70498472	26.5656	HOX{A6,A7,B6,B7}.p2	AB220685|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_177698|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr11_-_36757743_36757744	26.5074	HOX{A6,A7,B6,B7}.p2	BC141361|Odz2|23964|odd Oz/ten-m homolog 2 (Drosophila)	NM_011856|Odz2|23964|odd Oz/ten-m homolog 2 (Drosophila)
mm9_v1_chr3_+_5218545_5218658	26.449	HOX{A6,A7,B6,B7}.p2	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chrX_-_92853721_92853847	26.4431	HOX{A6,A7,B6,B7}.p2	AK129302|Zc4h2|245522|zinc finger, C4H2 domain containing	AK162005|Zc4h2|245522|zinc finger, C4H2 domain containing	AK086554|Zc4h2|245522|zinc finger, C4H2 domain containing	BC050850|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119285|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119311|Zc4h2|245522|zinc finger, C4H2 domain containing	BC079862|Zc4h2|245522|zinc finger, C4H2 domain containing	NM_001003916|Zc4h2|245522|zinc finger, C4H2 domain containing	AK155445|Zc4h2|245522|zinc finger, C4H2 domain containing
mm9_v1_chr8_+_46035561_46035561	26.441	HOX{A6,A7,B6,B7}.p2	AJ250768|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)	NM_001081286|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)
mm9_v1_chr17_+_3482314_3482460	26.3176	HOX{A6,A7,B6,B7}.p2	AK158489|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr8_-_48437701_48437701	26.1259	HOX{A6,A7,B6,B7}.p2	BC100572|Stox2|71069|storkhead box 2	BC100573|Stox2|71069|storkhead box 2	NM_175162|Stox2|71069|storkhead box 2
mm9_v1_chr5_+_72091188_72091254	26.1101	HOX{A6,A7,B6,B7}.p2	BC157920|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	BC130258|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	NM_008069|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm9_v1_chr12_+_110784600_110784655	25.7923	HOX{A6,A7,B6,B7}.p2	AK032021|Meg3|17263|maternally expressed 3	AK141629|Meg3|17263|maternally expressed 3
mm9_v1_chr9_+_74899844_74899963	25.7426	HOX{A6,A7,B6,B7}.p2	AK078740|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr4_-_91042997_91043190	25.5345	HOX{A6,A7,B6,B7}.p2	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr9_+_14135884_14136028	25.5289	HOX{A6,A7,B6,B7}.p2	AK033655|Sesn3|75747|sestrin 3
mm9_v1_chr11_+_28821585_28821724	25.4027	HOX{A6,A7,B6,B7}.p2	AK162532|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr2_+_65508501_65508501	25.1083	HOX{A6,A7,B6,B7}.p2	NM_001099298|Scn2a1|110876|sodium channel, voltage-gated, type II, alpha 1
mm9_v1_chr18_+_37885359_37885546	25.0403	HOX{A6,A7,B6,B7}.p2	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr3_-_80606641_80606686	24.9348	HOX{A6,A7,B6,B7}.p2	AK044574|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK134572|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK086614|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK043490|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK141525|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr17_+_17539635_17539669	24.919	HOX{A6,A7,B6,B7}.p2	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr14_-_122138082_122138150	24.8154	HOX{A6,A7,B6,B7}.p2	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr11_-_41996099_41996133	24.7549	HOX{A6,A7,B6,B7}.p2	M63436|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	BC132331|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	BC137733|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr18_+_37157533_37157533	24.739	HOX{A6,A7,B6,B7}.p2	AY013767|Pcdha9|192161|protocadherin alpha 9	NM_138661|Pcdha9|192161|protocadherin alpha 9
mm9_v1_chr13_-_105844882_105845009	24.4671	HOX{A6,A7,B6,B7}.p2	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr6_+_79968948_79969041	24.3779	HOX{A6,A7,B6,B7}.p2	BC037216|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4	AK038656|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr2_-_115890247_115890356	24.0708	HOX{A6,A7,B6,B7}.p2	AK158513|Meis2|17536|Meis homeobox 2	AK158839|Meis2|17536|Meis homeobox 2	NM_001159569|Meis2|17536|Meis homeobox 2	NM_001159570|Meis2|17536|Meis homeobox 2
mm9_v1_chr14_+_120724380_120724561	24.068	HOX{A6,A7,B6,B7}.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr3_-_132545879_132545884	23.9664	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_-_131343759_131343759	23.7864	HOX{A6,A7,B6,B7}.p2	AK172960|Armcx2|67416|armadillo repeat containing, X-linked 2	NM_001166397|Armcx2|67416|armadillo repeat containing, X-linked 2	NM_001166398|Armcx2|67416|armadillo repeat containing, X-linked 2	NM_026139|Armcx2|67416|armadillo repeat containing, X-linked 2
mm9_v1_chr1_-_89291303_89291307	23.7764	HOX{A6,A7,B6,B7}.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr18_+_37133455_37133703	23.7257	HOX{A6,A7,B6,B7}.p2	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr4_-_82666973_82667005	23.5611	HOX{A6,A7,B6,B7}.p2	BC138427|Frem1|329872|Fras1 related extracellular matrix protein 1	BC145274|Frem1|329872|Fras1 related extracellular matrix protein 1	AJ616838|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_177863|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr2_-_32942666_32942723	23.5414	HOX{A6,A7,B6,B7}.p2	BC132143|Garnl3|99326|GTPase activating RANGAP domain-like 3	AK034068|Garnl3|99326|GTPase activating RANGAP domain-like 3	NM_178888|Garnl3|99326|GTPase activating RANGAP domain-like 3
mm9_v1_chr18_+_20823908_20823925	23.5217	HOX{A6,A7,B6,B7}.p2	AK018701|Ttr|22139|transthyretin	AK014454|Ttr|22139|transthyretin	AK075588|Ttr|22139|transthyretin	BC086926|Ttr|22139|transthyretin	D89076|Ttr|22139|transthyretin	X03351|Ttr|22139|transthyretin	AK050155|Ttr|22139|transthyretin	BC032069|Ttr|22139|transthyretin
mm9_v1_chr2_-_160773804_160773823	23.2715	HOX{A6,A7,B6,B7}.p2	AK017414|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr17_+_44090222_44090252	23.2511	HOX{A6,A7,B6,B7}.p2	AK160865|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr3_-_38349112_38349206	23.2039	HOX{A6,A7,B6,B7}.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr14_+_102239673_102239864	23.1909	HOX{A6,A7,B6,B7}.p2	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr11_-_118162557_118162687	23.1388	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_50561315_50561342	23.125	HOX{A6,A7,B6,B7}.p2	AK168999|Cryab|12955|crystallin, alpha B
mm9_v1_chr3_-_146433544_146433656	23.1235	HOX{A6,A7,B6,B7}.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr11_+_28767772_28767889	23.0833	HOX{A6,A7,B6,B7}.p2	BC031184|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr9_-_49311823_49311910	22.8568	HOX{A6,A7,B6,B7}.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr2_-_7002287_7002310	22.7489	HOX{A6,A7,B6,B7}.p2	AK137292|Celf2|14007|CUGBP, Elav-like family member 2	AK164914|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr9_+_50561121_50561170	22.7329	HOX{A6,A7,B6,B7}.p2	BC010768|Cryab|12955|crystallin, alpha B
mm9_v1_chr9_+_50561092_50561116	22.647	HOX{A6,A7,B6,B7}.p2	AK146556|Cryab|12955|crystallin, alpha B
mm9_v1_chr13_+_94077988_94077988	22.5949	HOX{A6,A7,B6,B7}.p2	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr3_-_59024076_59024180	22.5389	HOX{A6,A7,B6,B7}.p2	AK014807|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chrM_+_12383_12506	22.5324	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_50561381_50561415	22.4333	HOX{A6,A7,B6,B7}.p2	CT010341|Cryab|12955|crystallin, alpha B	M63170|Cryab|12955|crystallin, alpha B
mm9_v1_chrM_+_13543_13577	22.4089	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_136384495_136384514	22.4041	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_195196423_195196475	22.3864	HOX{A6,A7,B6,B7}.p2	AF428262|Camk1g|215303|calcium/calmodulin-dependent protein kinase I gamma	BC021840|Camk1g|215303|calcium/calmodulin-dependent protein kinase I gamma	NM_144817|Camk1g|215303|calcium/calmodulin-dependent protein kinase I gamma
mm9_v1_chr12_+_53800369_53800393	22.3493	HOX{A6,A7,B6,B7}.p2	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr15_+_4325490_4325644	22.3394	HOX{A6,A7,B6,B7}.p2	AK038575|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_177355|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137637|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137639|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	AK044972|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm9_v1_chr18_+_64425037_64425080	22.2219	HOX{A6,A7,B6,B7}.p2	AK134678|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	BC075645|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK133780|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	X80502|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr6_+_77193078_77193105	22.1853	HOX{A6,A7,B6,B7}.p2	AK053364|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr7_+_129815257_129815287	22.1677	HOX{A6,A7,B6,B7}.p2	BC138673|Cacng3|54376|calcium channel, voltage-dependent, gamma subunit 3	BC145971|Cacng3|54376|calcium channel, voltage-dependent, gamma subunit 3	NM_019430|Cacng3|54376|calcium channel, voltage-dependent, gamma subunit 3	AJ272044|Cacng3|54376|calcium channel, voltage-dependent, gamma subunit 3
mm9_v1_chr2_+_155215225_155215281	22.1172	HOX{A6,A7,B6,B7}.p2	AK079304|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr13_-_100286446_100286519	22.0419	HOX{A6,A7,B6,B7}.p2	BC019183|Mtap1b|17755|microtubule-associated protein 1B	BC046287|Mtap1b|17755|microtubule-associated protein 1B	BC052016|Mtap1b|17755|microtubule-associated protein 1B	BC078457|Mtap1b|17755|microtubule-associated protein 1B	BC138033|Mtap1b|17755|microtubule-associated protein 1B	BC138034|Mtap1b|17755|microtubule-associated protein 1B	BC037105|Mtap1b|17755|microtubule-associated protein 1B	X51396|Mtap1b|17755|microtubule-associated protein 1B	AK158307|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr8_+_91116225_91116238	22.034	HOX{A6,A7,B6,B7}.p2	AK193660|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr6_-_36761360_36761360	21.9442	HOX{A6,A7,B6,B7}.p2	NM_008973|Ptn|19242|pleiotrophin
mm9_v1_chr2_+_70400179_70400352	21.891	HOX{A6,A7,B6,B7}.p2	AK054554|Gad1|14415|glutamic acid decarboxylase 1	NM_008077|Gad1|14415|glutamic acid decarboxylase 1	AK148497|Gad1|14415|glutamic acid decarboxylase 1	AK160868|Gad1|14415|glutamic acid decarboxylase 1	AK136801|Gad1|14415|glutamic acid decarboxylase 1	BC027059|Gad1|14415|glutamic acid decarboxylase 1	AF326547|Gad1|14415|glutamic acid decarboxylase 1	AF326548|Gad1|14415|glutamic acid decarboxylase 1	Z49976|Gad1|14415|glutamic acid decarboxylase 1
mm9_v1_chr12_-_4344470_4344503	21.8629	HOX{A6,A7,B6,B7}.p2	U64606|Ncoa1|17977|nuclear receptor coactivator 1	BC068177|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chrX_+_160528118_160528196	21.7793	HOX{A6,A7,B6,B7}.p2	AF178085|Tmem27|57394|transmembrane protein 27	NM_020626|Tmem27|57394|transmembrane protein 27	AK148534|Tmem27|57394|transmembrane protein 27	AK002337|Tmem27|57394|transmembrane protein 27	BC049912|Tmem27|57394|transmembrane protein 27
mm9_v1_chrM_+_13320_13486	21.7324	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_54043764_54043779	21.6895	HOX{A6,A7,B6,B7}.p2	BC055725|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr11_-_30098163_30098286	21.5728	HOX{A6,A7,B6,B7}.p2	AF017112|Spnb2|20742|spectrin beta 2	AF016040|Spnb2|20742|spectrin beta 2	AK079842|Spnb2|20742|spectrin beta 2	AK157727|Spnb2|20742|spectrin beta 2	AK169544|Spnb2|20742|spectrin beta 2	NM_009260|Spnb2|20742|spectrin beta 2
mm9_v1_chr18_+_23468585_23468619	21.4056	HOX{A6,A7,B6,B7}.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr18_+_37112301_37112419	21.3655	HOX{A6,A7,B6,B7}.p2	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chr10_-_108448003_108448027	21.3627	HOX{A6,A7,B6,B7}.p2	BC048187|Syt1|20979|synaptotagmin I	AK019304|Syt1|20979|synaptotagmin I	AK048973|Syt1|20979|synaptotagmin I	AK133578|Syt1|20979|synaptotagmin I
mm9_v1_chr1_+_9591347_9591354	21.2725	HOX{A6,A7,B6,B7}.p2	AK043759|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene	NM_178399|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr2_-_73463725_73463796	21.2692	HOX{A6,A7,B6,B7}.p2	AB264774|Chn1|108699|chimerin (chimaerin) 1	AK007182|Chn1|108699|chimerin (chimaerin) 1	NM_029716|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr8_-_37631772_37631789	21.2455	HOX{A6,A7,B6,B7}.p2	BC048730|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr14_+_76362274_76362304	21.2434	HOX{A6,A7,B6,B7}.p2	AK032624|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK017592|Kctd4|67516|potassium channel tetramerisation domain containing 4	BC028748|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK032314|Kctd4|67516|potassium channel tetramerisation domain containing 4
mm9_v1_chr11_-_55208276_55208319	21.2396	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_34659440_34659540	21.2358	HOX{A6,A7,B6,B7}.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr9_+_32072243_32072249	21.199	HOX{A6,A7,B6,B7}.p2	AK014385|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr18_+_20823750_20823857	21.1979	HOX{A6,A7,B6,B7}.p2	NM_013697|Ttr|22139|transthyretin	BC024702|Ttr|22139|transthyretin
mm9_v1_chr9_+_50560862_50561082	21.1791	HOX{A6,A7,B6,B7}.p2	NM_009964|Cryab|12955|crystallin, alpha B
mm9_v1_chr7_+_94732677_94732677	21.1603	HOX{A6,A7,B6,B7}.p2	NM_001081414|Grm5|108071|glutamate receptor, metabotropic 5	NM_001143834|Grm5|108071|glutamate receptor, metabotropic 5
mm9_v1_chr13_+_49704471_49704523	21.1193	HOX{A6,A7,B6,B7}.p2	AK075638|Ogn|18295|osteoglycin	AK163772|Ogn|18295|osteoglycin	D31951|Ogn|18295|osteoglycin	BC021939|Ogn|18295|osteoglycin
mm9_v1_chr5_-_23122181_23122418	21.008	HOX{A6,A7,B6,B7}.p2	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr10_+_3366075_3366075	21.0056	HOX{A6,A7,B6,B7}.p2	AK157384|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170800|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170801|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170802|Ipcef1|320495|interaction protein for cytohesin exchange factors 1
mm9_v1_chr17_+_44090341_44090399	20.9809	HOX{A6,A7,B6,B7}.p2	BC047153|Rcan2|53901|regulator of calcineurin 2	AF237887|Rcan2|53901|regulator of calcineurin 2	AF237791|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr10_+_115614313_115614481	20.9335	HOX{A6,A7,B6,B7}.p2	NM_001161839|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_001161838|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_001161840|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AF041866|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AF129509|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr4_+_104829963_104829965	20.9321	HOX{A6,A7,B6,B7}.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr14_+_66963139_66963219	20.928	HOX{A6,A7,B6,B7}.p2	BC014707|Stmn4|56471|stathmin-like 4	BC046752|Stmn4|56471|stathmin-like 4	NM_019675|Stmn4|56471|stathmin-like 4
mm9_v1_chr18_+_69753035_69753127	20.9014	HOX{A6,A7,B6,B7}.p2	AK014343|Tcf4|21413|transcription factor 4	U16321|Tcf4|21413|transcription factor 4	AK132140|Tcf4|21413|transcription factor 4	BC014293|Tcf4|21413|transcription factor 4
mm9_v1_chr2_+_177876635_177876639	20.7007	HOX{A6,A7,B6,B7}.p2	AK135144|Phactr3|74189|phosphatase and actin regulator 3	NM_028806|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr4_+_104829867_104829919	20.6559	HOX{A6,A7,B6,B7}.p2	AK159136|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr2_+_143768541_143768569	20.5516	HOX{A6,A7,B6,B7}.p2	AK011761|Dstn|56431|destrin
mm9_v1_chr4_+_34841027_34841057	20.5099	HOX{A6,A7,B6,B7}.p2	NM_009889|Cga|12640|glycoprotein hormones, alpha subunit	BC087926|Cga|12640|glycoprotein hormones, alpha subunit	J00643|Cga|12640|glycoprotein hormones, alpha subunit
mm9_v1_chr5_-_143665305_143665346	20.4333	HOX{A6,A7,B6,B7}.p2	AK151514|Actb|11461|actin, beta
mm9_v1_chr10_+_69388242_69388279	20.4137	HOX{A6,A7,B6,B7}.p2	L40631|Ank3|11735|ankyrin 3, epithelial	NM_009670|Ank3|11735|ankyrin 3, epithelial	NM_170687|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr3_-_151856766_151856837	20.3746	HOX{A6,A7,B6,B7}.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr1_-_170362388_170362504	20.3328	HOX{A6,A7,B6,B7}.p2	NM_008783|Pbx1|18514|pre B-cell leukemia transcription factor 1	NM_183355|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr3_-_88576415_88576522	20.2805	HOX{A6,A7,B6,B7}.p2	AK158745|Syt11|229521|synaptotagmin XI	AK144169|Syt11|229521|synaptotagmin XI	AK164082|Syt11|229521|synaptotagmin XI	BC054526|Syt11|229521|synaptotagmin XI	AK164368|Syt11|229521|synaptotagmin XI	NM_018804|Syt11|229521|synaptotagmin XI
mm9_v1_chr6_-_102414660_102414660	20.2734	HOX{A6,A7,B6,B7}.p2	NM_008779|Cntn3|18488|contactin 3
mm9_v1_chr2_-_79296732_79296799	20.263	HOX{A6,A7,B6,B7}.p2	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr13_+_27149438_27149473	20.238	HOX{A6,A7,B6,B7}.p2	NM_001163530|Prl|19109|prolactin	NM_011164|Prl|19109|prolactin	AK017547|Prl|19109|prolactin	AK161619|Prl|19109|prolactin	AK077493|Prl|19109|prolactin	AK017520|Prl|19109|prolactin	X04418|Prl|19109|prolactin	AK017521|Prl|19109|prolactin	AK017579|Prl|19109|prolactin	AK017584|Prl|19109|prolactin	AK133645|Prl|19109|prolactin	AK133736|Prl|19109|prolactin	AK133752|Prl|19109|prolactin	AK161553|Prl|19109|prolactin	AK161557|Prl|19109|prolactin	AK161565|Prl|19109|prolactin	AK161594|Prl|19109|prolactin	BC061141|Prl|19109|prolactin	X02892|Prl|19109|prolactin	AK017562|Prl|19109|prolactin
mm9_v1_chr11_-_74491006_74491182	20.2008	HOX{A6,A7,B6,B7}.p2	AK152284|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	AK164276|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr7_+_98239427_98239516	20.1849	HOX{A6,A7,B6,B7}.p2	AF388675|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr2_+_121183509_121183535	20.1369	HOX{A6,A7,B6,B7}.p2	BC025976|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr3_+_121160714_121160815	20.0576	HOX{A6,A7,B6,B7}.p2	AK181356|Cnn3|71994|calponin 3, acidic
mm9_v1_chr5_-_75098910_75098927	20.0099	HOX{A6,A7,B6,B7}.p2	AF034745|Lnx1|16924|ligand of numb-protein X 1	NM_001159577|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr14_+_102237708_102237728	19.9905	HOX{A6,A7,B6,B7}.p2	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chr3_-_141645214_141645214	19.9413	HOX{A6,A7,B6,B7}.p2	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr6_-_137519272_137519292	19.9244	HOX{A6,A7,B6,B7}.p2	AK155022|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr2_+_174171525_174171529	19.8506	HOX{A6,A7,B6,B7}.p2	AK187312|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK215851|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr7_+_98239230_98239295	19.8299	HOX{A6,A7,B6,B7}.p2	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr11_+_87391881_87392001	19.8243	HOX{A6,A7,B6,B7}.p2	AK133933|Sept4|18952|septin 4	AK137299|Sept4|18952|septin 4	AK039859|Sept4|18952|septin 4
mm9_v1_chr9_-_49607164_49607185	19.814	HOX{A6,A7,B6,B7}.p2	NM_001081445|Ncam1|17967|neural cell adhesion molecule 1	NM_001113204|Ncam1|17967|neural cell adhesion molecule 1	NM_010875|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr10_-_108447894_108447956	19.6826	HOX{A6,A7,B6,B7}.p2	D37792|Syt1|20979|synaptotagmin I	AK164153|Syt1|20979|synaptotagmin I	AK018163|Syt1|20979|synaptotagmin I
mm9_v1_chr15_-_58614642_58614788	19.6324	HOX{A6,A7,B6,B7}.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chrX_+_137212566_137212566	19.6032	HOX{A6,A7,B6,B7}.p2	AF196480|Mid2|23947|midline 2	NM_011845|Mid2|23947|midline 2
mm9_v1_chr10_-_108447996_108448001	19.5359	HOX{A6,A7,B6,B7}.p2	AK013798|Syt1|20979|synaptotagmin I	AK078790|Syt1|20979|synaptotagmin I
mm9_v1_chr19_+_56798916_56798947	19.4517	HOX{A6,A7,B6,B7}.p2	AK039569|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr12_+_90191833_90191842	19.3573	HOX{A6,A7,B6,B7}.p2	NM_172544|Nrxn3|18191|neurexin III	AK032126|Nrxn3|18191|neurexin III
mm9_v1_chr11_+_31901708_31901737	19.3295	HOX{A6,A7,B6,B7}.p2	AK011563|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr4_-_116944199_116944220	19.2965	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_92502076_92502169	19.2778	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_38554642_38554770	19.2452	HOX{A6,A7,B6,B7}.p2	AK122270|Zfp536|243937|zinc finger protein 536	AK030633|Zfp536|243937|zinc finger protein 536	NM_172385|Zfp536|243937|zinc finger protein 536
mm9_v1_chr7_+_58877199_58877199	19.2379	HOX{A6,A7,B6,B7}.p2	NM_080853|Slc17a6|140919|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm9_v1_chr4_+_8534378_8534506	19.2347	HOX{A6,A7,B6,B7}.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr6_+_79969636_79969636	19.1951	HOX{A6,A7,B6,B7}.p2	NM_178731|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr11_+_29618696_29618843	19.1535	HOX{A6,A7,B6,B7}.p2	AF326337|Rtn4|68585|reticulon 4
mm9_v1_chr15_+_39491073_39491119	19.0479	HOX{A6,A7,B6,B7}.p2	AK054553|Rims2|116838|regulating synaptic membrane exocytosis 2	AK032619|Rims2|116838|regulating synaptic membrane exocytosis 2
mm9_v1_chr2_-_73498303_73498483	19.0468	HOX{A6,A7,B6,B7}.p2	AB264771|Chn1|108699|chimerin (chimaerin) 1	BC025023|Chn1|108699|chimerin (chimaerin) 1	AK049943|Chn1|108699|chimerin (chimaerin) 1	AK147686|Chn1|108699|chimerin (chimaerin) 1	BC010825|Chn1|108699|chimerin (chimaerin) 1	BC024796|Chn1|108699|chimerin (chimaerin) 1	AK032630|Chn1|108699|chimerin (chimaerin) 1	AK075606|Chn1|108699|chimerin (chimaerin) 1	NM_001166604|Chn1|108699|chimerin (chimaerin) 1	NM_175752|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr1_+_181891219_181891219	19.0422	HOX{A6,A7,B6,B7}.p2	BC158017|Cdc42bpa|226751|CDC42 binding protein kinase alpha	BC158095|Cdc42bpa|226751|CDC42 binding protein kinase alpha	NM_001033285|Cdc42bpa|226751|CDC42 binding protein kinase alpha
mm9_v1_chr4_+_104830022_104830255	18.9942	HOX{A6,A7,B6,B7}.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chrX_+_131252456_131252527	18.9313	HOX{A6,A7,B6,B7}.p2	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr2_-_65405546_65405588	18.8673	HOX{A6,A7,B6,B7}.p2	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr3_+_121747377_121747377	18.8618	HOX{A6,A7,B6,B7}.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr15_+_92427539_92427556	18.8362	HOX{A6,A7,B6,B7}.p2	NM_001164594|Pdzrn4|239618|PDZ domain containing RING finger 4	AK135524|Pdzrn4|239618|PDZ domain containing RING finger 4
mm9_v1_chr15_-_48623520_48623540	18.7813	HOX{A6,A7,B6,B7}.p2	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr18_-_33623069_33623089	18.7776	HOX{A6,A7,B6,B7}.p2	BC054762|D0H4S114|27528|DNA segment, human D4S114	NM_001109990|D0H4S114|27528|DNA segment, human D4S114	X70398|D0H4S114|27528|DNA segment, human D4S114	AK048361|D0H4S114|27528|DNA segment, human D4S114	AK081502|D0H4S114|27528|DNA segment, human D4S114	AK133769|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr8_+_46744023_46744252	18.7704	HOX{A6,A7,B6,B7}.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr18_+_69843588_69843609	18.7202	HOX{A6,A7,B6,B7}.p2	AK017365|Tcf4|21413|transcription factor 4
mm9_v1_chr5_+_89012596_89012599	18.6551	HOX{A6,A7,B6,B7}.p2	BC049127|Rufy3|52822|RUN and FYVE domain containing 3	NM_027530|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr6_-_148937854_148937926	18.6302	HOX{A6,A7,B6,B7}.p2	AK143126|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr19_+_26822892_26822948	18.5878	HOX{A6,A7,B6,B7}.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr11_-_33893151_33893192	18.5604	HOX{A6,A7,B6,B7}.p2	AK048178|Kcnip1|70357|Kv channel-interacting protein 1	AK081845|Kcnip1|70357|Kv channel-interacting protein 1	DQ148494|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190886|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr14_-_125076242_125076348	18.5391	HOX{A6,A7,B6,B7}.p2	BC107003|Fgf14|14169|fibroblast growth factor 14	BC107004|Fgf14|14169|fibroblast growth factor 14	AK079100|Fgf14|14169|fibroblast growth factor 14	NM_207667|Fgf14|14169|fibroblast growth factor 14
mm9_v1_chr4_+_102432879_102432915	18.5061	HOX{A6,A7,B6,B7}.p2	AK043018|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr6_-_38077491_38077509	18.5009	HOX{A6,A7,B6,B7}.p2	BC059853|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene	BC042666|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr12_+_101447480_101447584	18.4059	HOX{A6,A7,B6,B7}.p2	BC021618|Calm1|12313|calmodulin 1
mm9_v1_chr1_+_34356614_34356645	18.3865	HOX{A6,A7,B6,B7}.p2	BC048929|Dst|13518|dystonin
mm9_v1_chr2_-_52414072_52414117	18.3668	HOX{A6,A7,B6,B7}.p2	AK043850|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK079616|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK038633|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_146123|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr14_+_119187092_119187139	18.3426	HOX{A6,A7,B6,B7}.p2	NM_001160096|Cldn10|58187|claudin 10	NM_001160097|Cldn10|58187|claudin 10	NM_001160098|Cldn10|58187|claudin 10	NM_023878|Cldn10|58187|claudin 10	AK020131|Cldn10|58187|claudin 10	BC021770|Cldn10|58187|claudin 10
mm9_v1_chr2_+_14310024_14310041	18.3221	HOX{A6,A7,B6,B7}.p2	NM_001012305|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	AK134622|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC089362|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113764|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113765|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12
mm9_v1_chr18_+_37854011_37854154	18.2609	HOX{A6,A7,B6,B7}.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr9_-_117539030_117539030	18.2114	HOX{A6,A7,B6,B7}.p2	AK046197|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172121|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr4_-_126430511_126430686	18.1412	HOX{A6,A7,B6,B7}.p2	BC017126|Ncdn|26562|neurochondrin	AK154889|Ncdn|26562|neurochondrin	AK170502|Ncdn|26562|neurochondrin	NM_011986|Ncdn|26562|neurochondrin
mm9_v1_chr15_-_54670878_54670918	18.0901	HOX{A6,A7,B6,B7}.p2	AK046689|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr12_-_42212337_42212337	18.0338	HOX{A6,A7,B6,B7}.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr5_+_89012547_89012592	18.0253	HOX{A6,A7,B6,B7}.p2	AK018184|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr12_+_71008808_71008844	17.9614	HOX{A6,A7,B6,B7}.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chr11_+_29607599_29607721	17.8996	HOX{A6,A7,B6,B7}.p2	AB073672|Rtn4|68585|reticulon 4
mm9_v1_chr18_-_15309939_15309954	17.8836	HOX{A6,A7,B6,B7}.p2	AY899808|Kctd1|106931|potassium channel tetramerisation domain containing 1	NM_134112|Kctd1|106931|potassium channel tetramerisation domain containing 1
mm9_v1_chr8_-_70434808_70434844	17.8491	HOX{A6,A7,B6,B7}.p2	BC052365|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK161498|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_030263|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr19_+_22767090_22767108	17.7965	HOX{A6,A7,B6,B7}.p2	AK086143|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK085182|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035244|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035245|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035246|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chrX_+_130829929_130829942	17.7554	HOX{A6,A7,B6,B7}.p2	AK005180|Tmem35|67564|transmembrane protein 35	AK018535|Tmem35|67564|transmembrane protein 35	AK043881|Tmem35|67564|transmembrane protein 35	AK042538|Tmem35|67564|transmembrane protein 35
mm9_v1_chr19_-_57290515_57290521	17.6721	HOX{A6,A7,B6,B7}.p2	BC141083|Ablim1|226251|actin-binding LIM protein 1	AF404774|Ablim1|226251|actin-binding LIM protein 1	NM_178688|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr19_+_23240506_23240595	17.6621	HOX{A6,A7,B6,B7}.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr11_+_52202706_52202713	17.6055	HOX{A6,A7,B6,B7}.p2	AK183628|Vdac1|22333|voltage-dependent anion channel 1	AK195288|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr5_-_51945054_51945159	17.5901	HOX{A6,A7,B6,B7}.p2	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr18_-_43219062_43219124	17.4717	HOX{A6,A7,B6,B7}.p2	BC026686|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK148956|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK013600|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	NM_028392|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr6_-_92517359_92517359	17.4255	HOX{A6,A7,B6,B7}.p2	BC050793|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134461|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chrX_+_130829763_130829919	17.4203	HOX{A6,A7,B6,B7}.p2	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr12_+_101447413_101447431	17.3865	HOX{A6,A7,B6,B7}.p2	BC048752|Calm1|12313|calmodulin 1
mm9_v1_chr14_-_57744057_57744057	17.3632	HOX{A6,A7,B6,B7}.p2	BC063762|Gjb6|14623|gap junction protein, beta 6	NM_008128|Gjb6|14623|gap junction protein, beta 6
mm9_v1_chr19_+_30020236_30020283	17.343	HOX{A6,A7,B6,B7}.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chrX_-_161764912_161765057	17.3101	HOX{A6,A7,B6,B7}.p2	BC056342|Glra2|237213|glycine receptor, alpha 2 subunit	BC068987|Glra2|237213|glycine receptor, alpha 2 subunit	NM_183427|Glra2|237213|glycine receptor, alpha 2 subunit	AK135134|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr19_+_4711220_4711230	17.31	HOX{A6,A7,B6,B7}.p2	BC079860|Spnb3|20743|spectrin beta 3	NM_021287|Spnb3|20743|spectrin beta 3
mm9_v1_chr19_+_4711207_4711210	17.2375	HOX{A6,A7,B6,B7}.p2	AK147671|Spnb3|20743|spectrin beta 3
mm9_v1_chrX_-_161765324_161765332	17.159	HOX{A6,A7,B6,B7}.p2	AK139335|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr3_+_34549057_34549104	17.0323	HOX{A6,A7,B6,B7}.p2	BC057574|Sox2|20674|SRY-box containing gene 2
mm9_v1_chr6_+_54251485_54251608	17.0246	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_114881393_114881398	17.0117	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_23468655_23468725	16.9301	HOX{A6,A7,B6,B7}.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chr1_-_180259336_180259529	16.9264	HOX{A6,A7,B6,B7}.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr1_-_38878059_38878110	16.8796	HOX{A6,A7,B6,B7}.p2	NM_001029878|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2	BC139127|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2	BC139130|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2
mm9_v1_chr8_+_81552335_81552485	16.8636	HOX{A6,A7,B6,B7}.p2	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr7_-_116313821_116313821	16.7798	HOX{A6,A7,B6,B7}.p2	BC053074|Lmo1|109594|LIM domain only 1	NM_057173|Lmo1|109594|LIM domain only 1
mm9_v1_chr5_+_89012537_89012542	16.7617	HOX{A6,A7,B6,B7}.p2	AK013185|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr9_+_46721685_46721730	16.7522	HOX{A6,A7,B6,B7}.p2	AK038437|2900052N01Rik|73040|RIKEN cDNA 2900052N01 gene	AK049847|2900052N01Rik|73040|RIKEN cDNA 2900052N01 gene	AK013669|2900052N01Rik|73040|RIKEN cDNA 2900052N01 gene	BC054400|2900052N01Rik|73040|RIKEN cDNA 2900052N01 gene	AK140089|2900052N01Rik|73040|RIKEN cDNA 2900052N01 gene
mm9_v1_chr6_+_90424727_90424917	16.7309	HOX{A6,A7,B6,B7}.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr14_+_47621014_47621039	16.6962	HOX{A6,A7,B6,B7}.p2	AK006299|Samd4|74480|sterile alpha motif domain containing 4	NM_001163433|Samd4|74480|sterile alpha motif domain containing 4	AK161277|Samd4|74480|sterile alpha motif domain containing 4	AK018954|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr2_+_135883662_135883710	16.6819	HOX{A6,A7,B6,B7}.p2	NM_029530|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr14_-_118450875_118451546	16.6616	HOX{A6,A7,B6,B7}.p2	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr12_+_39506844_39506916	16.6388	HOX{A6,A7,B6,B7}.p2	NM_007960|Etv1|14009|ets variant gene 1	L10426|Etv1|14009|ets variant gene 1	AK144713|Etv1|14009|ets variant gene 1	BC005645|Etv1|14009|ets variant gene 1
mm9_v1_chr7_+_138087002_138087002	16.5796	HOX{A6,A7,B6,B7}.p2	AK167667|Htra1|56213|HtrA serine peptidase 1
mm9_v1_chr3_+_108163704_108163812	16.5483	HOX{A6,A7,B6,B7}.p2	AK013673|Sort1|20661|sortilin 1
mm9_v1_chr3_-_148617598_148617598	16.526	HOX{A6,A7,B6,B7}.p2	NM_001081298|Lphn2|99633|latrophilin 2
mm9_v1_chr4_+_55093796_55093934	16.5197	HOX{A6,A7,B6,B7}.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr12_+_73889998_73890039	16.4802	HOX{A6,A7,B6,B7}.p2	AK009105|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform
mm9_v1_chr3_-_102586596_102586636	16.474	HOX{A6,A7,B6,B7}.p2	M35719|Tshb|22094|thyroid stimulating hormone, beta subunit	M35720|Tshb|22094|thyroid stimulating hormone, beta subunit	M35721|Tshb|22094|thyroid stimulating hormone, beta subunit	M35723|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165939|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165940|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_009432|Tshb|22094|thyroid stimulating hormone, beta subunit
mm9_v1_chrX_+_38754480_38754557	16.4326	HOX{A6,A7,B6,B7}.p2	NM_016886|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC086678|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr18_+_23656024_23656160	16.4243	HOX{A6,A7,B6,B7}.p2	AK147359|Dtna|13527|dystrobrevin alpha	BC050765|Dtna|13527|dystrobrevin alpha	AK131649|Dtna|13527|dystrobrevin alpha	X95226|Dtna|13527|dystrobrevin alpha
mm9_v1_chr2_-_140497116_140497135	16.3882	HOX{A6,A7,B6,B7}.p2	AK129369|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr2_+_135883963_135884022	16.2503	HOX{A6,A7,B6,B7}.p2	AK018222|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene	AK045946|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chrX_+_80194208_80194241	16.2053	HOX{A6,A7,B6,B7}.p2	AK052856|Dmd|13405|dystrophin, muscular dystrophy	NM_007868|Dmd|13405|dystrophin, muscular dystrophy	M68859|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr16_+_57152994_57153228	16.186	HOX{A6,A7,B6,B7}.p2	BC025450|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK011763|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr2_-_140497183_140497200	16.1598	HOX{A6,A7,B6,B7}.p2	AK045146|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	AK021255|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	BC052043|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr9_-_49607017_49607038	16.1011	HOX{A6,A7,B6,B7}.p2	AK011804|Ncam1|17967|neural cell adhesion molecule 1	AK011905|Ncam1|17967|neural cell adhesion molecule 1	AK082621|Ncam1|17967|neural cell adhesion molecule 1	AK051197|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr15_-_8660393_8660418	16.0986	HOX{A6,A7,B6,B7}.p2	BC028638|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC066154|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK045716|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chrX_+_38754605_38754612	16.0557	HOX{A6,A7,B6,B7}.p2	BC076584|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr3_-_151856716_151856729	16.0547	HOX{A6,A7,B6,B7}.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr2_+_35413977_35414092	16.0033	HOX{A6,A7,B6,B7}.p2	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr1_+_12708582_12708625	15.9849	HOX{A6,A7,B6,B7}.p2	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr2_+_177876858_177876930	15.9826	HOX{A6,A7,B6,B7}.p2	BC059869|Phactr3|74189|phosphatase and actin regulator 3	AK032242|Phactr3|74189|phosphatase and actin regulator 3	AY501387|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr18_+_63158808_63158850	15.9809	HOX{A6,A7,B6,B7}.p2	AK217399|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr5_+_75548337_75548416	15.9555	HOX{A6,A7,B6,B7}.p2	AK136490|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK035501|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK147267|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	BC020405|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	BC037467|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	M57683|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide
mm9_v1_chr2_-_122420914_122421005	15.9376	HOX{A6,A7,B6,B7}.p2	AK167378|Gatm|67092|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
mm9_v1_chr7_-_77511607_77511666	15.9247	HOX{A6,A7,B6,B7}.p2	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr3_-_146433200_146433208	15.9025	HOX{A6,A7,B6,B7}.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr1_+_155756310_155756313	15.8372	HOX{A6,A7,B6,B7}.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr15_-_76983985_76984241	15.8081	HOX{A6,A7,B6,B7}.p2	AF387322|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659951|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659952|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659953|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017388|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017389|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	BC002124|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AF229055|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AK044929|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110828|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110829|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110830|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr4_+_15808409_15808487	15.6854	HOX{A6,A7,B6,B7}.p2	AK002635|Calb1|12307|calbindin 1	AK005081|Calb1|12307|calbindin 1	AK005243|Calb1|12307|calbindin 1	AK028050|Calb1|12307|calbindin 1	AK038856|Calb1|12307|calbindin 1	AK048517|Calb1|12307|calbindin 1	AK077499|Calb1|12307|calbindin 1	NM_009788|Calb1|12307|calbindin 1	AK028327|Calb1|12307|calbindin 1	AK078358|Calb1|12307|calbindin 1	M21531|Calb1|12307|calbindin 1	BC016421|Calb1|12307|calbindin 1
mm9_v1_chr19_+_26679649_26679686	15.6826	HOX{A6,A7,B6,B7}.p2	BC075641|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	NM_011416|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK020092|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr4_+_104829951_104829954	15.6824	HOX{A6,A7,B6,B7}.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr3_+_84756090_84756352	15.6587	HOX{A6,A7,B6,B7}.p2	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr18_+_37127284_37127409	15.6238	HOX{A6,A7,B6,B7}.p2	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr18_+_37915375_37915594	15.5969	HOX{A6,A7,B6,B7}.p2	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr17_+_44090192_44090211	15.5861	HOX{A6,A7,B6,B7}.p2	AB061524|Rcan2|53901|regulator of calcineurin 2	AK049006|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chrX_-_147091911_147092125	15.5682	HOX{A6,A7,B6,B7}.p2	AK047777|Tro|56191|trophinin	AB036783|Tro|56191|trophinin	AF288605|Tro|56191|trophinin	AF288606|Tro|56191|trophinin	NM_001002272|Tro|56191|trophinin	NM_019548|Tro|56191|trophinin	BC075630|Tro|56191|trophinin
mm9_v1_chr11_-_76322920_76322935	15.5222	HOX{A6,A7,B6,B7}.p2	BC058708|Abr|109934|active BCR-related gene	NM_198018|Abr|109934|active BCR-related gene
mm9_v1_chr17_+_3397206_3397287	15.4395	HOX{A6,A7,B6,B7}.p2	AB022915|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	NM_011878|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK158137|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK129474|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr15_+_97923019_97923019	15.4311	HOX{A6,A7,B6,B7}.p2	NM_001163488|Pfkm|18642|phosphofructokinase, muscle
mm9_v1_chr14_+_76904316_76904371	15.372	HOX{A6,A7,B6,B7}.p2	AK147039|Tsc22d1|21807|TSC22 domain family, member 1	NM_009366|Tsc22d1|21807|TSC22 domain family, member 1	AK145204|Tsc22d1|21807|TSC22 domain family, member 1	AK135277|Tsc22d1|21807|TSC22 domain family, member 1	AK135282|Tsc22d1|21807|TSC22 domain family, member 1	AK135514|Tsc22d1|21807|TSC22 domain family, member 1	AK148732|Tsc22d1|21807|TSC22 domain family, member 1	X62940|Tsc22d1|21807|TSC22 domain family, member 1	AK179000|Tsc22d1|21807|TSC22 domain family, member 1	BC026703|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr2_+_136539202_136539314	15.3623	HOX{A6,A7,B6,B7}.p2	AK138653|Snap25|20614|synaptosomal-associated protein 25	AK161896|Snap25|20614|synaptosomal-associated protein 25	M22012|Snap25|20614|synaptosomal-associated protein 25	BC018249|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr18_+_37925233_37925233	15.3514	HOX{A6,A7,B6,B7}.p2	BC056998|Pcdhga12|93724|protocadherin gamma subfamily A, 12	NM_033595|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr3_-_152645206_152645210	15.3495	HOX{A6,A7,B6,B7}.p2	AK042683|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr4_-_136891931_136891995	15.3015	HOX{A6,A7,B6,B7}.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr18_+_37105758_37105860	15.2969	HOX{A6,A7,B6,B7}.p2	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr18_-_33623287_33623340	15.2803	HOX{A6,A7,B6,B7}.p2	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr19_-_19075535_19075606	15.153	HOX{A6,A7,B6,B7}.p2	DQ779924|Rorb|225998|RAR-related orphan receptor beta	BC024768|Rorb|225998|RAR-related orphan receptor beta	AK044421|Rorb|225998|RAR-related orphan receptor beta	BC024842|Rorb|225998|RAR-related orphan receptor beta	NM_146095|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr11_+_16157685_16157805	15.1083	HOX{A6,A7,B6,B7}.p2	AK033048|Vstm2a|211739|V-set and transmembrane domain containing 2A	NM_145967|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK032473|Vstm2a|211739|V-set and transmembrane domain containing 2A	BC027127|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK079096|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK137363|Vstm2a|211739|V-set and transmembrane domain containing 2A
mm9_v1_chr12_+_62625477_62625618	15.1015	HOX{A6,A7,B6,B7}.p2	AK048443|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5	AK034245|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5	NM_178714|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr2_-_170232008_170232013	15.0814	HOX{A6,A7,B6,B7}.p2	AK008957|Bcas1|76960|breast carcinoma amplified sequence 1	AK031825|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr3_+_34548916_34548976	15.0642	HOX{A6,A7,B6,B7}.p2	NM_011443|Sox2|20674|SRY-box containing gene 2	U31967|Sox2|20674|SRY-box containing gene 2
mm9_v1_chr2_+_136539143_136539198	14.9711	HOX{A6,A7,B6,B7}.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr18_+_37874471_37874595	14.9328	HOX{A6,A7,B6,B7}.p2	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr6_-_55631256_55631256	14.9222	HOX{A6,A7,B6,B7}.p2	AK144360|Neurod6|11922|neurogenic differentiation 6	NM_009717|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr6_+_77192839_77192971	14.9064	HOX{A6,A7,B6,B7}.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr8_-_38001686_38001686	14.8987	HOX{A6,A7,B6,B7}.p2	HM008381|Dlc1|50768|deleted in liver cancer 1	NM_001194940|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr18_-_31476721_31476786	14.7818	HOX{A6,A7,B6,B7}.p2	U71202|Rit2|19762|Ras-like without CAAX 2	AK162953|Rit2|19762|Ras-like without CAAX 2	AK040743|Rit2|19762|Ras-like without CAAX 2	AK041418|Rit2|19762|Ras-like without CAAX 2	BC018267|Rit2|19762|Ras-like without CAAX 2	NM_009065|Rit2|19762|Ras-like without CAAX 2	AK140726|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr3_-_152645143_152645180	14.7526	HOX{A6,A7,B6,B7}.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr9_+_54452124_54452126	14.7337	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_126626878_126627109	14.6939	HOX{A6,A7,B6,B7}.p2	AK158684|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_001166413|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AF487515|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AK010452|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	BC041113|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_028027|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25
mm9_v1_chr3_-_26052228_26052228	14.6914	HOX{A6,A7,B6,B7}.p2	BC098461|Nlgn1|192167|neuroligin 1	NM_001163387|Nlgn1|192167|neuroligin 1
mm9_v1_chr19_+_8665743_8665780	14.6727	HOX{A6,A7,B6,B7}.p2	NM_001164634|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	NM_031194|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK031962|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8
mm9_v1_chr9_-_103595136_103595138	14.5564	HOX{A6,A7,B6,B7}.p2	AK132350|Tmem108|81907|transmembrane protein 108
mm9_v1_chr18_+_37560490_37560542	14.5072	HOX{A6,A7,B6,B7}.p2	AK032626|Pcdhb9|93880|protocadherin beta 9	NM_053134|Pcdhb9|93880|protocadherin beta 9	BC055319|Pcdhb9|93880|protocadherin beta 9	BC062640|Pcdhb9|93880|protocadherin beta 9
mm9_v1_chr18_+_37974732_37974732	14.4617	HOX{A6,A7,B6,B7}.p2	BC064808|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	NM_033582|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr9_+_36640268_36640432	14.4453	HOX{A6,A7,B6,B7}.p2	AK138656|Fez1|235180|fasciculation and elongation protein zeta 1 (zygin I)	BC029629|Fez1|235180|fasciculation and elongation protein zeta 1 (zygin I)
mm9_v1_chr2_-_7002344_7002370	14.435	HOX{A6,A7,B6,B7}.p2	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr11_-_20729367_20729429	14.4209	HOX{A6,A7,B6,B7}.p2	AK081513|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr1_+_129702056_129702170	14.4089	HOX{A6,A7,B6,B7}.p2	AK033697|Ccnt2|72949|cyclin T2
mm9_v1_chr18_+_37849488_37849707	14.3968	HOX{A6,A7,B6,B7}.p2	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr2_+_177876710_177876721	14.2844	HOX{A6,A7,B6,B7}.p2	BC058621|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr2_+_20211539_20211581	14.2835	HOX{A6,A7,B6,B7}.p2	NM_001081006|Etl4|208618|enhancer trap locus 4
mm9_v1_chr12_-_73337707_73337756	14.2318	HOX{A6,A7,B6,B7}.p2	AK002997|Rtn1|104001|reticulon 1	NM_001007596|Rtn1|104001|reticulon 1
mm9_v1_chr2_+_109516053_109516053	14.2251	HOX{A6,A7,B6,B7}.p2	AY057909|Bdnf|12064|brain derived neurotrophic factor	AY057910|Bdnf|12064|brain derived neurotrophic factor	AY057911|Bdnf|12064|brain derived neurotrophic factor	EF125670|Bdnf|12064|brain derived neurotrophic factor	EF125671|Bdnf|12064|brain derived neurotrophic factor	EF125672|Bdnf|12064|brain derived neurotrophic factor	NM_001048139|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr8_-_85982247_85982289	14.1795	HOX{A6,A7,B6,B7}.p2	AK002521|Scoc|56367|short coiled-coil protein	BC147069|Scoc|56367|short coiled-coil protein	NM_001039137|Scoc|56367|short coiled-coil protein
mm9_v1_chr7_-_140179678_140180024	14.1133	HOX{A6,A7,B6,B7}.p2	AK187460|Ctbp2|13017|C-terminal binding protein 2	AK161077|Ctbp2|13017|C-terminal binding protein 2	AK198744|Ctbp2|13017|C-terminal binding protein 2	AK199198|Ctbp2|13017|C-terminal binding protein 2	AK201071|Ctbp2|13017|C-terminal binding protein 2	AK217772|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr18_-_39026347_39026400	14.0313	HOX{A6,A7,B6,B7}.p2	BC027001|Fgf1|14164|fibroblast growth factor 1	BC037601|Fgf1|14164|fibroblast growth factor 1	AF012926|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr11_+_31900378_31900504	13.9541	HOX{A6,A7,B6,B7}.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr6_+_17290478_17290486	13.9426	HOX{A6,A7,B6,B7}.p2	AK010839|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr18_+_37833939_37833988	13.9305	HOX{A6,A7,B6,B7}.p2	BC060691|Pcdhga3|93711|protocadherin gamma subfamily A, 3	NM_033586|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr9_+_34296315_34296391	13.8897	HOX{A6,A7,B6,B7}.p2	NM_001190911|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190912|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190913|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190914|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_026324|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK013621|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AY169782|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK034142|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK079332|Kirrel3|67703|kin of IRRE like 3 (Drosophila)
mm9_v1_chr10_+_18189773_18189786	13.8606	HOX{A6,A7,B6,B7}.p2	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr7_+_97535516_97535523	13.796	HOX{A6,A7,B6,B7}.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr9_-_42062436_42062522	13.7801	HOX{A6,A7,B6,B7}.p2	AK050439|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK165139|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chrX_-_7000037_7000113	13.7656	HOX{A6,A7,B6,B7}.p2	BC072610|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AF038507|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AK008437|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene
mm9_v1_chr9_-_123587923_123587963	13.7623	HOX{A6,A7,B6,B7}.p2	AJ964961|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	BC118933|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	NM_139142|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK160468|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK043297|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK080979|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AK140445|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A	AJ428067|Slc6a20a|102680|solute carrier family 6 (neurotransmitter transporter), member 20A
mm9_v1_chr18_+_69843730_69844096	13.7417	HOX{A6,A7,B6,B7}.p2	AK021032|Tcf4|21413|transcription factor 4	AK047926|Tcf4|21413|transcription factor 4	AK045400|Tcf4|21413|transcription factor 4	AK083152|Tcf4|21413|transcription factor 4	AK039181|Tcf4|21413|transcription factor 4	AK040346|Tcf4|21413|transcription factor 4	AK032345|Tcf4|21413|transcription factor 4
mm9_v1_chr6_-_137519312_137519326	13.7145	HOX{A6,A7,B6,B7}.p2	AK149683|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chrX_+_150158113_150158178	13.6973	HOX{A6,A7,B6,B7}.p2	AK008724|2210013O21Rik|70123|RIKEN cDNA 2210013O21 gene
mm9_v1_chr17_-_14831233_14831243	13.6898	HOX{A6,A7,B6,B7}.p2	AK142552|Thbs2|21826|thrombospondin 2
mm9_v1_chrX_-_147241307_147241451	13.6414	HOX{A6,A7,B6,B7}.p2	AK179193|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr9_+_34296412_34296564	13.6351	HOX{A6,A7,B6,B7}.p2	AK045373|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	BC063072|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK038385|Kirrel3|67703|kin of IRRE like 3 (Drosophila)
mm9_v1_chrX_+_157205944_157206093	13.6117	HOX{A6,A7,B6,B7}.p2	BC046422|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	NM_011302|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF084561|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF073780|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AJ011381|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)
mm9_v1_chr10_+_90564953_90564975	13.6002	HOX{A6,A7,B6,B7}.p2	AK209988|Ikbip|67454|IKBKB interacting protein
mm9_v1_chr18_+_35750406_35750586	13.5994	HOX{A6,A7,B6,B7}.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr1_+_135142673_135142702	13.5261	HOX{A6,A7,B6,B7}.p2	NM_001160268|Plekha6|240753|pleckstrin homology domain containing, family A member 6	NM_182930|Plekha6|240753|pleckstrin homology domain containing, family A member 6	BC054547|Plekha6|240753|pleckstrin homology domain containing, family A member 6	AK173074|Plekha6|240753|pleckstrin homology domain containing, family A member 6
mm9_v1_chr13_-_16115192_16115259	13.484	HOX{A6,A7,B6,B7}.p2	AK045681|B230303A05Rik|328191|RIKEN cDNA B230303A05 gene
mm9_v1_chr13_+_58909254_58909275	13.4151	HOX{A6,A7,B6,B7}.p2	AK147391|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr5_-_5265981_5266073	13.4077	HOX{A6,A7,B6,B7}.p2	AK083269|Cdk14|18647|cyclin-dependent kinase 14	AK139386|Cdk14|18647|cyclin-dependent kinase 14	BC068134|Cdk14|18647|cyclin-dependent kinase 14	AK138437|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr12_+_50484907_50484951	13.3529	HOX{A6,A7,B6,B7}.p2	BC064449|Foxg1|15228|forkhead box G1
mm9_v1_chr13_-_36826104_36826206	13.2813	HOX{A6,A7,B6,B7}.p2	AK003046|Nrn1|68404|neuritin 1
mm9_v1_chr2_+_124962427_124962427	13.278	HOX{A6,A7,B6,B7}.p2	AK141570|Ctxn2|381418|cortexin 2	NM_001162934|Ctxn2|381418|cortexin 2
mm9_v1_chr6_+_7505070_7505199	13.2269	HOX{A6,A7,B6,B7}.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chr7_-_125587065_125587075	13.1999	HOX{A6,A7,B6,B7}.p2	AB069667|Syt17|110058|synaptotagmin XVII	NM_138649|Syt17|110058|synaptotagmin XVII
mm9_v1_chr9_+_43877511_43877533	13.1312	HOX{A6,A7,B6,B7}.p2	NM_016808|Usp2|53376|ubiquitin specific peptidase 2	BC017517|Usp2|53376|ubiquitin specific peptidase 2	AY255640|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr6_-_54543167_54543172	13.1007	HOX{A6,A7,B6,B7}.p2	AK030620|Fkbp14|231997|FK506 binding protein 14
mm9_v1_chr12_+_45412878_45412942	13.0942	HOX{A6,A7,B6,B7}.p2	AK033938|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr16_-_45724422_45724643	13.0541	HOX{A6,A7,B6,B7}.p2	BC043027|Tagln3|56370|transgelin 3	AB031291|Tagln3|56370|transgelin 3	AK013484|Tagln3|56370|transgelin 3	BC055338|Tagln3|56370|transgelin 3	NM_019754|Tagln3|56370|transgelin 3
mm9_v1_chr10_+_28863801_28863929	13.0474	HOX{A6,A7,B6,B7}.p2	NM_026138|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene	AK030682|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene
mm9_v1_chr3_+_133903056_133903111	13.0119	HOX{A6,A7,B6,B7}.p2	NM_001004367|Cxxc4|319478|CXXC finger 4
mm9_v1_chr2_-_101469101_101469106	12.8731	HOX{A6,A7,B6,B7}.p2	AK010820|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene
mm9_v1_chr4_-_82151590_82151637	12.8586	HOX{A6,A7,B6,B7}.p2	Y07685|Nfib|18028|nuclear factor I/B
mm9_v1_chr4_+_9196439_9196508	12.8437	HOX{A6,A7,B6,B7}.p2	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr3_+_133899454_133899460	12.8229	HOX{A6,A7,B6,B7}.p2	BC065149|Cxxc4|319478|CXXC finger 4
mm9_v1_chr5_-_5265598_5265717	12.7684	HOX{A6,A7,B6,B7}.p2	AK087398|Cdk14|18647|cyclin-dependent kinase 14	AK165149|Cdk14|18647|cyclin-dependent kinase 14	U62391|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr1_+_66515003_66515020	12.751	HOX{A6,A7,B6,B7}.p2	AK043914|Unc80|329178|unc-80 homolog (C. elegans)	FJ210934|Unc80|329178|unc-80 homolog (C. elegans)	NM_175510|Unc80|329178|unc-80 homolog (C. elegans)
mm9_v1_chr18_-_33623400_33623430	12.7042	HOX{A6,A7,B6,B7}.p2	NM_001109989|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr6_-_54543121_54543160	12.7031	HOX{A6,A7,B6,B7}.p2	BC029109|Fkbp14|231997|FK506 binding protein 14	NM_153573|Fkbp14|231997|FK506 binding protein 14	BC034313|Fkbp14|231997|FK506 binding protein 14	AK081692|Fkbp14|231997|FK506 binding protein 14	AK044876|Fkbp14|231997|FK506 binding protein 14
mm9_v1_chrX_-_73088288_73088302	12.6552	HOX{A6,A7,B6,B7}.p2	AK146087|Pls3|102866|plastin 3 (T-isoform)	NM_001166454|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr11_+_16951805_16951896	12.6205	HOX{A6,A7,B6,B7}.p2	AK087090|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK148349|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK171947|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr9_-_64799413_64799413	12.5857	HOX{A6,A7,B6,B7}.p2	BC016094|Slc24a1|214111|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_144813|Slc24a1|214111|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
mm9_v1_chr6_+_3944011_3944021	12.5647	HOX{A6,A7,B6,B7}.p2	AK020863|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	AK020903|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_010314|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	BC023064|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm9_v1_chr1_+_9591550_9591585	12.5449	HOX{A6,A7,B6,B7}.p2	BC066997|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr11_-_106642684_106642809	12.5062	HOX{A6,A7,B6,B7}.p2	AK149022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr16_-_45724720_45724763	12.5028	HOX{A6,A7,B6,B7}.p2	AK012333|Tagln3|56370|transgelin 3
mm9_v1_chr11_+_78640103_78640114	12.4946	HOX{A6,A7,B6,B7}.p2	BC130224|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene	AK009070|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene
mm9_v1_chr14_-_31304341_31304341	12.4865	HOX{A6,A7,B6,B7}.p2	AJ437292|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_028981|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr11_-_99105293_99105435	12.4827	HOX{A6,A7,B6,B7}.p2	BC079890|Krt222|268481|keratin 222	AK031954|Krt222|268481|keratin 222	NM_172946|Krt222|268481|keratin 222	AK044068|Krt222|268481|keratin 222	AK138778|Krt222|268481|keratin 222
mm9_v1_chr18_-_35374531_35374610	12.4608	HOX{A6,A7,B6,B7}.p2	AK043173|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046818|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK049920|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK043784|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr1_+_74589461_74589571	12.4479	HOX{A6,A7,B6,B7}.p2	NM_001081456|Plcd4|18802|phospholipase C, delta 4	AK140231|Plcd4|18802|phospholipase C, delta 4	AK039149|Plcd4|18802|phospholipase C, delta 4	BC066156|Plcd4|18802|phospholipase C, delta 4
mm9_v1_chr14_+_120724163_120724175	12.4145	HOX{A6,A7,B6,B7}.p2	BC075665|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr5_-_124028994_124029065	12.4017	HOX{A6,A7,B6,B7}.p2	AK003546|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr12_-_73509537_73509656	12.3754	HOX{A6,A7,B6,B7}.p2	AB074899|Rtn1|104001|reticulon 1	CT010392|Rtn1|104001|reticulon 1	BC030455|Rtn1|104001|reticulon 1
mm9_v1_chr18_-_15562126_15562266	12.3673	HOX{A6,A7,B6,B7}.p2	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr1_+_179375951_179375951	12.3636	HOX{A6,A7,B6,B7}.p2	AF140224|Zfp238|30928|zinc finger protein 238	NM_013915|Zfp238|30928|zinc finger protein 238
mm9_v1_chr10_+_115580947_115580958	12.3583	HOX{A6,A7,B6,B7}.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr10_+_87553816_87553819	12.3536	HOX{A6,A7,B6,B7}.p2	AK138363|Pmch|110312|pro-melanin-concentrating hormone	BC048534|Pmch|110312|pro-melanin-concentrating hormone	NM_029971|Pmch|110312|pro-melanin-concentrating hormone	AK020723|Pmch|110312|pro-melanin-concentrating hormone
mm9_v1_chr12_+_62624880_62624934	12.3281	HOX{A6,A7,B6,B7}.p2	AK220546|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr3_-_115956312_115956401	12.2943	HOX{A6,A7,B6,B7}.p2	BC029939|Gpr88|64378|G-protein coupled receptor 88	AB042408|Gpr88|64378|G-protein coupled receptor 88	NM_022427|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr19_-_5799376_5799434	12.2689	HOX{A6,A7,B6,B7}.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr1_+_97230610_97230736	12.2365	HOX{A6,A7,B6,B7}.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr8_-_108092197_108092197	12.2123	HOX{A6,A7,B6,B7}.p2	BC079902|Agrp|11604|agouti related protein	NM_007427|Agrp|11604|agouti related protein
mm9_v1_chr18_+_37460452_37460636	12.1982	HOX{A6,A7,B6,B7}.p2	AK030570|Pcdhb3|93874|protocadherin beta 3	NM_053128|Pcdhb3|93874|protocadherin beta 3	BC079557|Pcdhb3|93874|protocadherin beta 3	AF326296|Pcdhb3|93874|protocadherin beta 3	AY013785|Pcdhb3|93874|protocadherin beta 3
mm9_v1_chr4_-_11892848_11892892	12.1603	HOX{A6,A7,B6,B7}.p2	BC048372|Pdp1|381511|pyruvate dehyrogenase phosphatase catalytic subunit 1	NM_001098231|Pdp1|381511|pyruvate dehyrogenase phosphatase catalytic subunit 1
mm9_v1_chr5_-_89886732_89886828	12.1509	HOX{A6,A7,B6,B7}.p2	M55413|Gc|14473|group specific component	AK010965|Gc|14473|group specific component	BC010762|Gc|14473|group specific component	BC051395|Gc|14473|group specific component	NM_008096|Gc|14473|group specific component
mm9_v1_chr19_-_46387052_46387173	12.1446	HOX{A6,A7,B6,B7}.p2	BC069847|Psd|73728|pleckstrin and Sec7 domain containing
mm9_v1_chr14_-_52948344_52948436	12.1336	HOX{A6,A7,B6,B7}.p2	NM_015772|Sall2|50524|sal-like 2 (Drosophila)	AJ007396|Sall2|50524|sal-like 2 (Drosophila)
mm9_v1_chr7_+_128089656_128089684	12.1172	HOX{A6,A7,B6,B7}.p2	AK162059|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr15_+_83622380_83622428	12.0983	HOX{A6,A7,B6,B7}.p2	BC057550|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chr5_-_84846256_84846332	12.0755	HOX{A6,A7,B6,B7}.p2	AK089143|Epha5|13839|Eph receptor A5
mm9_v1_chr13_+_55802874_55802961	12.0625	HOX{A6,A7,B6,B7}.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr4_+_102262447_102262471	12.0625	HOX{A6,A7,B6,B7}.p2	AK051102|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177981|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC071259|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr1_+_9591492_9591529	12.0602	HOX{A6,A7,B6,B7}.p2	AK043576|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr4_+_106721017_106721031	12.0599	HOX{A6,A7,B6,B7}.p2	AK144320|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr10_-_40021983_40022002	12.0121	HOX{A6,A7,B6,B7}.p2	AK146840|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK166187|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK168165|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK171238|Amd1|11702|S-adenosylmethionine decarboxylase 1	D12780|Amd1|11702|S-adenosylmethionine decarboxylase 1	NM_007444|Amd2|100041585|S-adenosylmethionine decarboxylase 2	NM_009665|Amd1|11702|S-adenosylmethionine decarboxylase 1
mm9_v1_chr9_-_40184005_40184028	11.9797	HOX{A6,A7,B6,B7}.p2	AK122465|Gramd1b|235283|GRAM domain containing 1B
mm9_v1_chr7_+_97535490_97535508	11.9687	HOX{A6,A7,B6,B7}.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr15_-_77949709_77949709	11.9327	HOX{A6,A7,B6,B7}.p2	AF077739|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2	NM_007583|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2
mm9_v1_chr19_-_14672540_14672588	11.9299	HOX{A6,A7,B6,B7}.p2	AK134989|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	BC086631|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr18_+_35750071_35750097	11.9183	HOX{A6,A7,B6,B7}.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr6_-_28781687_28781746	11.8949	HOX{A6,A7,B6,B7}.p2	BC117833|Lrrc4|192198|leucine rich repeat containing 4	BC117834|Lrrc4|192198|leucine rich repeat containing 4	AF300458|Lrrc4|192198|leucine rich repeat containing 4	BC012209|Lrrc4|192198|leucine rich repeat containing 4	DQ177325|Lrrc4|192198|leucine rich repeat containing 4	NM_138682|Lrrc4|192198|leucine rich repeat containing 4
mm9_v1_chr3_+_129235336_129235458	11.8564	HOX{A6,A7,B6,B7}.p2	AK167373|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AB072039|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC040097|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC100576|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AF480860|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK165847|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC098492|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr10_+_99950922_99950922	11.8219	HOX{A6,A7,B6,B7}.p2	NM_146009|Cep290|216274|centrosomal protein 290
mm9_v1_chr9_+_85739048_85739158	11.8217	HOX{A6,A7,B6,B7}.p2	AK050794|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr2_+_109514856_109514856	11.8086	HOX{A6,A7,B6,B7}.p2	AY057908|Bdnf|12064|brain derived neurotrophic factor	EF125669|Bdnf|12064|brain derived neurotrophic factor	NM_007540|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr14_-_37911383_37911496	11.7756	HOX{A6,A7,B6,B7}.p2	AF426393|Cdhr1|170677|cadherin-related family member 1	BC042454|Cdhr1|170677|cadherin-related family member 1	AK143151|Cdhr1|170677|cadherin-related family member 1	BC058270|Cdhr1|170677|cadherin-related family member 1	NM_130878|Cdhr1|170677|cadherin-related family member 1
mm9_v1_chr6_-_13788453_13788525	11.764	HOX{A6,A7,B6,B7}.p2	AK043090|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr6_+_106068758_106068758	11.7482	HOX{A6,A7,B6,B7}.p2	AK043507|Cntn4|269784|contactin 4	NM_001109751|Cntn4|269784|contactin 4
mm9_v1_chr18_+_37828606_37828758	11.6943	HOX{A6,A7,B6,B7}.p2	AB093250|Pcdhga2|93710|protocadherin gamma subfamily A, 2	BC139178|Pcdhga2|93710|protocadherin gamma subfamily A, 2	AY013796|Pcdhga2|93710|protocadherin gamma subfamily A, 2	NM_033585|Pcdhga2|93710|protocadherin gamma subfamily A, 2
mm9_v1_chr4_+_126850123_126850181	11.6588	HOX{A6,A7,B6,B7}.p2	AK158868|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3
mm9_v1_chr4_-_75779379_75779379	11.6487	HOX{A6,A7,B6,B7}.p2	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr1_-_4350323_4350394	11.5941	HOX{A6,A7,B6,B7}.p2	BC038794|Rp1|19888|retinitis pigmentosa 1 (human)	BC120927|Rp1|19888|retinitis pigmentosa 1 (human)	BC120928|Rp1|19888|retinitis pigmentosa 1 (human)	AF155141|Rp1|19888|retinitis pigmentosa 1 (human)	AK044413|Rp1|19888|retinitis pigmentosa 1 (human)	BC096607|Rp1|19888|retinitis pigmentosa 1 (human)	NM_011283|Rp1|19888|retinitis pigmentosa 1 (human)
mm9_v1_chr6_-_55631085_55631098	11.587	HOX{A6,A7,B6,B7}.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr15_+_34167908_34168078	11.5619	HOX{A6,A7,B6,B7}.p2	AK077269|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK079581|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	BC019120|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AF317418|Laptm4b|114128|lysosomal-associated protein transmembrane 4B
mm9_v1_chr15_+_34167780_34167904	11.5521	HOX{A6,A7,B6,B7}.p2	NM_033521|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK077933|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	EU561010|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK166014|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK082807|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK146868|Laptm4b|114128|lysosomal-associated protein transmembrane 4B
mm9_v1_chr9_-_16182674_16182674	11.5469	HOX{A6,A7,B6,B7}.p2	NM_001080814|Fat3|270120|FAT tumor suppressor homolog 3 (Drosophila)
mm9_v1_chr15_-_98780503_98780728	11.5347	HOX{A6,A7,B6,B7}.p2	AK199768|Tuba1a|22142|tubulin, alpha 1A	AK216974|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr5_-_103640272_103640352	11.5333	HOX{A6,A7,B6,B7}.p2	AK036275|Mapk10|26414|mitogen-activated protein kinase 10	BC046625|Mapk10|26414|mitogen-activated protein kinase 10	AK163206|Mapk10|26414|mitogen-activated protein kinase 10	AK076990|Mapk10|26414|mitogen-activated protein kinase 10	BC026697|Mapk10|26414|mitogen-activated protein kinase 10	AK082242|Mapk10|26414|mitogen-activated protein kinase 10	NM_001081567|Mapk10|26414|mitogen-activated protein kinase 10	NM_009158|Mapk10|26414|mitogen-activated protein kinase 10
mm9_v1_chr10_-_40021920_40021980	11.4996	HOX{A6,A7,B6,B7}.p2	Z14986|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC092072|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC011110|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC071220|Amd1|11702|S-adenosylmethionine decarboxylase 1
mm9_v1_chr2_-_79748552_79748555	11.4773	HOX{A6,A7,B6,B7}.p2	AK014810|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AF159298|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AY845863|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AY845864|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001009978|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001009979|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr17_-_65929913_65929945	11.4735	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_89700245_89700254	11.4529	HOX{A6,A7,B6,B7}.p2	AK149299|Sag|20215|retinal S-antigen	NM_009118|Sag|20215|retinal S-antigen
mm9_v1_chr9_+_72596925_72596929	11.4522	HOX{A6,A7,B6,B7}.p2	AK195685|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr16_+_43619057_43619100	11.4408	HOX{A6,A7,B6,B7}.p2	AK178854|Zbtb20|56490|zinc finger and BTB domain containing 20	AK013698|Zbtb20|56490|zinc finger and BTB domain containing 20	AK036125|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr6_+_143156520_143156614	11.4257	HOX{A6,A7,B6,B7}.p2	AK004338|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr8_+_61390551_61390637	11.4156	HOX{A6,A7,B6,B7}.p2	BC030500|BC030500|234290|cDNA sequence BC030500	NM_173411|BC030500|234290|cDNA sequence BC030500
mm9_v1_chr2_+_124978315_124978357	11.3633	HOX{A6,A7,B6,B7}.p2	AK052750|Slc12a1|20495|solute carrier family 12, member 1	AK085455|Slc12a1|20495|solute carrier family 12, member 1	AK128928|Slc12a1|20495|solute carrier family 12, member 1	NM_001079690|Slc12a1|20495|solute carrier family 12, member 1	NM_183354|Slc12a1|20495|solute carrier family 12, member 1	U20973|Slc12a1|20495|solute carrier family 12, member 1	U20974|Slc12a1|20495|solute carrier family 12, member 1	U20975|Slc12a1|20495|solute carrier family 12, member 1	BC016888|Slc12a1|20495|solute carrier family 12, member 1
mm9_v1_chr13_+_58909236_58909250	11.3534	HOX{A6,A7,B6,B7}.p2	AK028827|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr16_-_92400226_92400324	11.3292	HOX{A6,A7,B6,B7}.p2	AF237790|Rcan1|54720|regulator of calcineurin 1	AF263239|Rcan1|54720|regulator of calcineurin 1	BC013551|Rcan1|54720|regulator of calcineurin 1	AK077283|Rcan1|54720|regulator of calcineurin 1	NM_019466|Rcan1|54720|regulator of calcineurin 1
mm9_v1_chr19_+_10271150_10271263	11.2958	HOX{A6,A7,B6,B7}.p2	AK191356|Fads1|76267|fatty acid desaturase 1	AK199659|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr16_+_43640198_43640217	11.2249	HOX{A6,A7,B6,B7}.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr15_-_54751515_54751700	11.109	HOX{A6,A7,B6,B7}.p2	EU131009|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	EU131010|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_001136077|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC003264|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AF123542|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK088491|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK161144|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK163881|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC058759|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK038940|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_015744|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr6_-_90611092_90611239	11.0752	HOX{A6,A7,B6,B7}.p2	BC043918|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr2_-_66278870_66278908	11.065	HOX{A6,A7,B6,B7}.p2	AK046001|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	AK134744|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	NM_018733|Scn1a|20265|sodium channel, voltage-gated, type I, alpha
mm9_v1_chr4_-_109125244_109125254	11.0629	HOX{A6,A7,B6,B7}.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr16_-_29541568_29541568	11.0512	HOX{A6,A7,B6,B7}.p2	BC048410|Atp13a4|224079|ATPase type 13A4	NM_001164612|Atp13a4|224079|ATPase type 13A4	NM_172613|Atp13a4|224079|ATPase type 13A4
mm9_v1_chr9_-_52484889_52484906	10.9551	HOX{A6,A7,B6,B7}.p2	AK053489|AI593442|330941|expressed sequence AI593442
mm9_v1_chr3_-_32981940_32981960	10.9234	HOX{A6,A7,B6,B7}.p2	AB032591|Pex5l|58869|peroxisomal biogenesis factor 5-like	AK039764|Pex5l|58869|peroxisomal biogenesis factor 5-like	NM_021483|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr10_+_110929965_110929972	10.894	HOX{A6,A7,B6,B7}.p2	AK216281|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr17_-_46155601_46155620	10.8916	HOX{A6,A7,B6,B7}.p2	AK031905|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr1_-_167523348_167523717	10.8316	HOX{A6,A7,B6,B7}.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr2_-_91284827_91284865	10.7656	HOX{A6,A7,B6,B7}.p2	AK018339|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC049648|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr14_+_120696834_120696895	10.7193	HOX{A6,A7,B6,B7}.p2	AK167479|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr4_-_108311676_108311740	10.6956	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_74150754_74150876	10.6003	HOX{A6,A7,B6,B7}.p2	AK141620|Unc13a|382018|unc-13 homolog A (C. elegans)	AK048697|Unc13a|382018|unc-13 homolog A (C. elegans)	AK039579|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr4_-_4065585_4065591	10.5739	HOX{A6,A7,B6,B7}.p2	M55181|Penk|18619|preproenkephalin	BC049766|Penk|18619|preproenkephalin	NM_001002927|Penk|18619|preproenkephalin
mm9_v1_chr15_-_12479631_12479703	10.571	HOX{A6,A7,B6,B7}.p2	AK021207|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr1_+_12682572_12682637	10.5435	HOX{A6,A7,B6,B7}.p2	AK028285|Sulf1|240725|sulfatase 1	AK045002|Sulf1|240725|sulfatase 1
mm9_v1_chr11_+_100442602_100442668	10.4742	HOX{A6,A7,B6,B7}.p2	AK190081|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	AK211066|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr8_-_89996089_89996284	10.4739	HOX{A6,A7,B6,B7}.p2	AK161846|Cbln1|12404|cerebellin 1 precursor protein	BC051956|Cbln1|12404|cerebellin 1 precursor protein	BC055730|Cbln1|12404|cerebellin 1 precursor protein	BC132120|Cbln1|12404|cerebellin 1 precursor protein	BC132122|Cbln1|12404|cerebellin 1 precursor protein
mm9_v1_chr2_-_7317513_7317626	10.4479	HOX{A6,A7,B6,B7}.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr7_+_104840013_104840128	10.4419	HOX{A6,A7,B6,B7}.p2	AK021117|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr6_-_93628981_93629110	10.3992	HOX{A6,A7,B6,B7}.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr3_-_32884000_32884000	10.3985	HOX{A6,A7,B6,B7}.p2	AK006035|Pex5l|58869|peroxisomal biogenesis factor 5-like	NM_001163517|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr2_-_121176719_121176752	10.3847	HOX{A6,A7,B6,B7}.p2	AK122264|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	AK083140|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	NM_178795|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	BC065138|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	AF502585|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1
mm9_v1_chr6_+_29820210_29820288	10.3697	HOX{A6,A7,B6,B7}.p2	AK122382|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2
mm9_v1_chr10_-_87937335_87937390	10.3453	HOX{A6,A7,B6,B7}.p2	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr9_-_101101334_101101402	10.3293	HOX{A6,A7,B6,B7}.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr3_+_87973934_87974022	10.3245	HOX{A6,A7,B6,B7}.p2	AK032042|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr8_-_3625251_3625286	10.3102	HOX{A6,A7,B6,B7}.p2	M21532|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_008790|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr9_+_120058842_120058868	10.3076	HOX{A6,A7,B6,B7}.p2	AK013799|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK019323|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK028057|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK083103|Mobp|17433|myelin-associated oligodendrocytic basic protein	AK140055|Mobp|17433|myelin-associated oligodendrocytic basic protein	BC048492|Mobp|17433|myelin-associated oligodendrocytic basic protein	NM_001039364|Mobp|17433|myelin-associated oligodendrocytic basic protein	NM_001039365|Mobp|17433|myelin-associated oligodendrocytic basic protein	NM_008614|Mobp|17433|myelin-associated oligodendrocytic basic protein
mm9_v1_chr1_-_89283173_89283296	10.3065	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_-_66129715_66129836	10.278	HOX{A6,A7,B6,B7}.p2	AY264291|Cplx4|225644|complexin 4	BC016082|Cplx4|225644|complexin 4	NM_145493|Cplx4|225644|complexin 4	AK044262|Cplx4|225644|complexin 4
mm9_v1_chr17_-_72102224_72102233	10.2616	HOX{A6,A7,B6,B7}.p2	BC046516|BC027072|225004|cDNA sequence BC027072	NM_146082|BC027072|225004|cDNA sequence BC027072	BC060373|BC027072|225004|cDNA sequence BC027072
mm9_v1_chr11_+_29641691_29641734	10.2446	HOX{A6,A7,B6,B7}.p2	AK003859|Rtn4|68585|reticulon 4
mm9_v1_chr6_+_4483741_4483796	10.1937	HOX{A6,A7,B6,B7}.p2	BC012438|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr13_+_49703402_49703439	10.1794	HOX{A6,A7,B6,B7}.p2	AK028300|Ogn|18295|osteoglycin	AK160760|Ogn|18295|osteoglycin	AK053650|Ogn|18295|osteoglycin	NM_008760|Ogn|18295|osteoglycin
mm9_v1_chr3_-_57098670_57098869	10.1704	HOX{A6,A7,B6,B7}.p2	L15429|Tm4sf1|17112|transmembrane 4 superfamily member 1	L15443|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK133556|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK077326|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK164718|Tm4sf1|17112|transmembrane 4 superfamily member 1
mm9_v1_chr1_+_12682510_12682540	10.1294	HOX{A6,A7,B6,B7}.p2	NM_001198565|Sulf1|240725|sulfatase 1	NM_001198566|Sulf1|240725|sulfatase 1	AK078756|Sulf1|240725|sulfatase 1
mm9_v1_chr13_+_58909168_58909217	10.0849	HOX{A6,A7,B6,B7}.p2	NM_001025074|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	X17647|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr1_-_132586370_132586494	10.0718	HOX{A6,A7,B6,B7}.p2	BC065379|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr3_+_17954689_17954736	10.0624	HOX{A6,A7,B6,B7}.p2	AF218865|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr14_-_88871202_88871202	10.0609	HOX{A6,A7,B6,B7}.p2	AK083114|Pcdh20|219257|protocadherin 20	NM_178685|Pcdh20|219257|protocadherin 20
mm9_v1_chrX_-_35605626_35605657	10.0252	HOX{A6,A7,B6,B7}.p2	NM_172930|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chrX_-_49034548_49034559	10.0236	HOX{A6,A7,B6,B7}.p2	BC047151|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	AK052348|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr18_+_69753146_69753168	9.93308	HOX{A6,A7,B6,B7}.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr11_+_19879583_19879598	9.91337	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_35002066_35002125	9.90613	HOX{A6,A7,B6,B7}.p2	BC062265|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr7_+_129776837_129777102	9.86697	HOX{A6,A7,B6,B7}.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr19_+_20676453_20676504	9.8563	HOX{A6,A7,B6,B7}.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr15_-_93426312_93426402	9.81261	HOX{A6,A7,B6,B7}.p2	AK153711|Prickle1|106042|prickle homolog 1 (Drosophila)	NM_001033217|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr1_-_175266945_175266952	9.811	HOX{A6,A7,B6,B7}.p2	AK031927|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr11_-_115940157_115940300	9.79762	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr17_+_70911084_70911126	9.7937	HOX{A6,A7,B6,B7}.p2	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr17_+_78907402_78907511	9.7761	HOX{A6,A7,B6,B7}.p2	AK158117|Vit|74199|vitrin	NM_001197028|Vit|74199|vitrin	NM_028813|Vit|74199|vitrin	BC034120|Vit|74199|vitrin	AF454755|Vit|74199|vitrin	AK013193|Vit|74199|vitrin	AK051606|Vit|74199|vitrin
mm9_v1_chr8_+_96335202_96335227	9.73201	HOX{A6,A7,B6,B7}.p2	M36778|Gnao1|14681|guanine nucleotide binding protein, alpha O	M36777|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr4_+_154932761_154932805	9.72715	HOX{A6,A7,B6,B7}.p2	AK194739|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK203879|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK205062|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr9_+_37175190_37175276	9.72688	HOX{A6,A7,B6,B7}.p2	AK013637|Hepacam|72927|hepatocyte cell adhesion molecule	NM_175189|Hepacam|72927|hepatocyte cell adhesion molecule	BC139057|Hepacam|72927|hepatocyte cell adhesion molecule	BC139058|Hepacam|72927|hepatocyte cell adhesion molecule	AK081154|Hepacam|72927|hepatocyte cell adhesion molecule	BC082537|Hepacam|72927|hepatocyte cell adhesion molecule
mm9_v1_chr6_-_55631039_55631067	9.71237	HOX{A6,A7,B6,B7}.p2	AK144303|Neurod6|11922|neurogenic differentiation 6	BC087831|Neurod6|11922|neurogenic differentiation 6	U29086|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr18_+_25224729_25224737	9.69545	HOX{A6,A7,B6,B7}.p2	BC060607|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr18_-_31476626_31476690	9.69279	HOX{A6,A7,B6,B7}.p2	AK140133|Rit2|19762|Ras-like without CAAX 2	AK046425|Rit2|19762|Ras-like without CAAX 2	AK139394|Rit2|19762|Ras-like without CAAX 2	AF084463|Rit2|19762|Ras-like without CAAX 2	AK162862|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr3_-_103541868_103541874	9.6886	HOX{A6,A7,B6,B7}.p2	BC005485|Olfml3|99543|olfactomedin-like 3
mm9_v1_chrX_-_35605544_35605615	9.68853	HOX{A6,A7,B6,B7}.p2	BC062956|Fam70a|245386|family with sequence similarity 70, member A	AK077178|Fam70a|245386|family with sequence similarity 70, member A	AK078264|Fam70a|245386|family with sequence similarity 70, member A	AK041985|Fam70a|245386|family with sequence similarity 70, member A	AK045375|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr3_+_84668066_84668066	9.68848	HOX{A6,A7,B6,B7}.p2	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr16_+_13358513_13358556	9.68571	HOX{A6,A7,B6,B7}.p2	NM_153588|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr13_-_36826245_36826363	9.68425	HOX{A6,A7,B6,B7}.p2	AK161859|Nrn1|68404|neuritin 1	BC035531|Nrn1|68404|neuritin 1	NM_153529|Nrn1|68404|neuritin 1
mm9_v1_chr11_+_110829346_110829387	9.6825	HOX{A6,A7,B6,B7}.p2	AK078905|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK128942|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	NM_010604|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	BC033442|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16
mm9_v1_chrX_+_90920450_90920749	9.68187	HOX{A6,A7,B6,B7}.p2	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr17_-_14831262_14831287	9.68148	HOX{A6,A7,B6,B7}.p2	NM_011581|Thbs2|21826|thrombospondin 2
mm9_v1_chr13_+_75227306_75227456	9.67505	HOX{A6,A7,B6,B7}.p2	X57088|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1	M69196|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1	AK043742|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1	M58589|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1	NM_013628|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1	BC108982|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1	BC108983|Pcsk1|18548|proprotein convertase subtilisin/kexin type 1
mm9_v1_chr18_+_37880036_37880207	9.63748	HOX{A6,A7,B6,B7}.p2	AK083581|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	BC138701|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	AY013806|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	NM_033576|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr14_-_111154292_111154370	9.63608	HOX{A6,A7,B6,B7}.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr1_-_52714729_52714742	9.6334	HOX{A6,A7,B6,B7}.p2	BC016598|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chrX_+_20276894_20276951	9.53433	HOX{A6,A7,B6,B7}.p2	AK191787|Cdk16|18555|cyclin-dependent kinase 16	AK206138|Cdk16|18555|cyclin-dependent kinase 16	AK208421|Cdk16|18555|cyclin-dependent kinase 16	AK215824|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr12_-_21396339_21396369	9.51908	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_34548512_34548642	9.50668	HOX{A6,A7,B6,B7}.p2	AK032849|Cald1|109624|caldesmon 1	AK050642|Cald1|109624|caldesmon 1	BC055908|Cald1|109624|caldesmon 1
mm9_v1_chr18_+_37966157_37966201	9.47711	HOX{A6,A7,B6,B7}.p2	AY013811|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr6_+_54222814_54222856	9.45116	HOX{A6,A7,B6,B7}.p2	BC051139|Chn2|69993|chimerin (chimaerin) 2	NM_023543|Chn2|69993|chimerin (chimaerin) 2	BC141060|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr9_+_72859850_72859978	9.44145	HOX{A6,A7,B6,B7}.p2	BC006717|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr10_-_4707228_4707322	9.40601	HOX{A6,A7,B6,B7}.p2	BC089511|Vip|22353|vasoactive intestinal polypeptide	AK018599|Vip|22353|vasoactive intestinal polypeptide	NM_011702|Vip|22353|vasoactive intestinal polypeptide
mm9_v1_chr3_-_69663781_69663817	9.40033	HOX{A6,A7,B6,B7}.p2	AK009973|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	BC022628|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AF365876|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK004017|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK010117|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_001164210|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_133675|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene
mm9_v1_chr11_+_78640059_78640096	9.39813	HOX{A6,A7,B6,B7}.p2	AK007467|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene	AK144380|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene	NM_001076681|1810012P15Rik|66274|RIKEN cDNA 1810012P15 gene
mm9_v1_chr18_-_6202199_6202203	9.38756	HOX{A6,A7,B6,B7}.p2	AK038217|Kif5b|16573|kinesin family member 5B
mm9_v1_chr12_-_102988596_102988615	9.37026	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_-_146444377_146444386	9.34877	HOX{A6,A7,B6,B7}.p2	AK150122|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK150134|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164200|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr4_+_126800830_126800906	9.33622	HOX{A6,A7,B6,B7}.p2	BC060297|Zmym6|100177|zinc finger, MYM-type 6
mm9_v1_chr12_+_118896501_118896507	9.31287	HOX{A6,A7,B6,B7}.p2	AK083591|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr18_-_67712374_67712430	9.29655	HOX{A6,A7,B6,B7}.p2	BC058669|Spire1|68166|spire homolog 1 (Drosophila)	NM_194355|Spire1|68166|spire homolog 1 (Drosophila)	BC094375|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr3_-_117063317_117063389	9.2462	HOX{A6,A7,B6,B7}.p2	BC082323|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137701|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137702|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK129149|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr2_+_106533281_106533425	9.23082	HOX{A6,A7,B6,B7}.p2	AK165186|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr4_+_5726856_5726857	9.21281	HOX{A6,A7,B6,B7}.p2	AK049898|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr7_-_91520991_91521040	9.21113	HOX{A6,A7,B6,B7}.p2	AK032628|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2
mm9_v1_chr2_-_140497204_140497211	9.20903	HOX{A6,A7,B6,B7}.p2	AK028252|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	AK031464|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	AK161100|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	NM_001172160|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	NM_178382|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr4_+_101223198_101223198	9.18751	HOX{A6,A7,B6,B7}.p2	BC060734|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164583|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr4_-_33010429_33010479	9.15911	HOX{A6,A7,B6,B7}.p2	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr4_-_82151657_82151695	9.15244	HOX{A6,A7,B6,B7}.p2	AK148573|Nfib|18028|nuclear factor I/B	Y07687|Nfib|18028|nuclear factor I/B	AK047576|Nfib|18028|nuclear factor I/B
mm9_v1_chr11_-_50108981_50109027	9.14061	HOX{A6,A7,B6,B7}.p2	AK004422|Canx|12330|calnexin
mm9_v1_chr11_+_93905557_93905590	9.13946	HOX{A6,A7,B6,B7}.p2	BC052058|Spag9|70834|sperm associated antigen 9	BC060100|Spag9|70834|sperm associated antigen 9	BC094670|Spag9|70834|sperm associated antigen 9
mm9_v1_chr8_-_47209499_47209499	9.0827	HOX{A6,A7,B6,B7}.p2	NM_207213|Snx25|102141|sorting nexin 25
mm9_v1_chr10_+_119256444_119256567	9.06431	HOX{A6,A7,B6,B7}.p2	BC067398|Grip1|74053|glutamate receptor interacting protein 1	AK039673|Grip1|74053|glutamate receptor interacting protein 1	AB051560|Grip1|74053|glutamate receptor interacting protein 1	AB051561|Grip1|74053|glutamate receptor interacting protein 1	NM_028736|Grip1|74053|glutamate receptor interacting protein 1	NM_130891|Grip1|74053|glutamate receptor interacting protein 1
mm9_v1_chr9_+_109954534_109954609	9.05226	HOX{A6,A7,B6,B7}.p2	AK138416|Mtap4|17758|microtubule-associated protein 4	AK146790|Mtap4|17758|microtubule-associated protein 4	BC042645|Mtap4|17758|microtubule-associated protein 4	AK134996|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chr5_-_115636064_115636129	9.04918	HOX{A6,A7,B6,B7}.p2	AB079604|Cabp1|29867|calcium binding protein 1	AF169152|Cabp1|29867|calcium binding protein 1	AF169153|Cabp1|29867|calcium binding protein 1	NM_013879|Cabp1|29867|calcium binding protein 1
mm9_v1_chr9_+_113721698_113721717	9.04563	HOX{A6,A7,B6,B7}.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr9_-_96978102_96978110	9.03642	HOX{A6,A7,B6,B7}.p2	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr7_-_127345462_127345501	9.02767	HOX{A6,A7,B6,B7}.p2	BC045159|Crym|12971|crystallin, mu	AK138422|Crym|12971|crystallin, mu	AK163781|Crym|12971|crystallin, mu	AK143116|Crym|12971|crystallin, mu	AK163801|Crym|12971|crystallin, mu	AF039391|Crym|12971|crystallin, mu	NM_016669|Crym|12971|crystallin, mu
mm9_v1_chr8_+_24780132_24780145	8.96139	HOX{A6,A7,B6,B7}.p2	AK140391|Zmat4|320158|zinc finger, matrin type 4	AK140413|Zmat4|320158|zinc finger, matrin type 4	NM_177086|Zmat4|320158|zinc finger, matrin type 4	AK036254|Zmat4|320158|zinc finger, matrin type 4	AK134793|Zmat4|320158|zinc finger, matrin type 4	BC065110|Zmat4|320158|zinc finger, matrin type 4	BC079657|Zmat4|320158|zinc finger, matrin type 4
mm9_v1_chr6_-_135664978_135664993	8.96073	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_-_35374663_35374683	8.94391	HOX{A6,A7,B6,B7}.p2	AK122278|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK036155|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK044705|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046774|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	NM_178005|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr7_-_126622690_126622768	8.91716	HOX{A6,A7,B6,B7}.p2	AK144065|Umod|22242|uromodulin	AK164688|Umod|22242|uromodulin	L33406|Umod|22242|uromodulin	AK165507|Umod|22242|uromodulin	AK085460|Umod|22242|uromodulin	NM_009470|Umod|22242|uromodulin
mm9_v1_chr19_-_36994088_36994132	8.88458	HOX{A6,A7,B6,B7}.p2	BC055778|Fgfbp3|72514|fibroblast growth factor binding protein 3	NM_028263|Fgfbp3|72514|fibroblast growth factor binding protein 3	AK167949|Fgfbp3|72514|fibroblast growth factor binding protein 3
mm9_v1_chr12_-_102988510_102988573	8.87999	HOX{A6,A7,B6,B7}.p2	AK203388|Fbln5|23876|fibulin 5	AK212054|Fbln5|23876|fibulin 5
mm9_v1_chr7_-_151622848_151622956	8.84216	HOX{A6,A7,B6,B7}.p2	AK184845|Cttn|13043|cortactin
mm9_v1_chr17_-_45797425_45797512	8.80152	HOX{A6,A7,B6,B7}.p2	AK216465|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chrX_-_149078963_149079085	8.7907	HOX{A6,A7,B6,B7}.p2	AK029338|Shroom2|110380|shroom family member 2	AK032256|Shroom2|110380|shroom family member 2	AK049850|Shroom2|110380|shroom family member 2	BC092373|Shroom2|110380|shroom family member 2
mm9_v1_chr5_-_93611701_93611836	8.7755	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_-_73033990_73033990	8.72853	HOX{A6,A7,B6,B7}.p2	NM_007723|Cnga1|12788|cyclic nucleotide gated channel alpha 1
mm9_v1_chr9_+_54442900_54442929	8.70819	HOX{A6,A7,B6,B7}.p2	AK003393|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK146717|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha
mm9_v1_chr5_-_23835349_23835431	8.66915	HOX{A6,A7,B6,B7}.p2	AF012869|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2	AF034762|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2
mm9_v1_chr15_-_77950450_77950459	8.63239	HOX{A6,A7,B6,B7}.p2	AK045362|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2
mm9_v1_chr2_-_71384748_71384810	8.62951	HOX{A6,A7,B6,B7}.p2	M80540|Dlx2|13392|distal-less homeobox 2	AK144652|Dlx2|13392|distal-less homeobox 2	NM_010054|Dlx2|13392|distal-less homeobox 2
mm9_v1_chr18_+_65048630_65048682	8.62347	HOX{A6,A7,B6,B7}.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr18_+_37906739_37906841	8.60221	HOX{A6,A7,B6,B7}.p2	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr12_-_103057112_103057240	8.59689	HOX{A6,A7,B6,B7}.p2	AK165018|Fbln5|23876|fibulin 5	AK085170|Fbln5|23876|fibulin 5	AK084895|Fbln5|23876|fibulin 5
mm9_v1_chr6_+_54553140_54553140	8.55299	HOX{A6,A7,B6,B7}.p2	BC052360|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001001335|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr11_+_116518421_116518421	8.54629	HOX{A6,A7,B6,B7}.p2	DQ390337|Gm11744|100038570|predicted gene 11744	NM_001163318|Gm11744|100038570|predicted gene 11744
mm9_v1_chr11_-_86517662_86517713	8.5148	HOX{A6,A7,B6,B7}.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr16_-_29544883_29544949	8.50421	HOX{A6,A7,B6,B7}.p2	AK029367|Atp13a4|224079|ATPase type 13A4	AK014520|Atp13a4|224079|ATPase type 13A4	AK029303|Atp13a4|224079|ATPase type 13A4	AK028776|Atp13a4|224079|ATPase type 13A4	NM_001164613|Atp13a4|224079|ATPase type 13A4
mm9_v1_chr2_+_121134843_121134847	8.46505	HOX{A6,A7,B6,B7}.p2	AK018185|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr5_+_34185760_34185844	8.44903	HOX{A6,A7,B6,B7}.p2	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr11_+_100442831_100442963	8.42202	HOX{A6,A7,B6,B7}.p2	AK217119|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr11_-_59025422_59025528	8.41739	HOX{A6,A7,B6,B7}.p2	AK211704|Arf1|11840|ADP-ribosylation factor 1	AK195749|Arf1|11840|ADP-ribosylation factor 1
mm9_v1_chr4_+_150227911_150228027	8.40164	HOX{A6,A7,B6,B7}.p2	BC057646|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr15_+_16707855_16707855	8.36627	HOX{A6,A7,B6,B7}.p2	NM_009869|Cdh9|12565|cadherin 9
mm9_v1_chr18_-_33623668_33623692	8.34281	HOX{A6,A7,B6,B7}.p2	NM_001109988|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chrX_+_160578411_160578593	8.30696	HOX{A6,A7,B6,B7}.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr12_-_111932287_111932415	8.29901	HOX{A6,A7,B6,B7}.p2	BC090391|Gm12346|544800|heat shock protein 1, alpha pseudogene
mm9_v1_chr5_+_130263548_130263603	8.28731	HOX{A6,A7,B6,B7}.p2	AK199226|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr15_-_101616888_101616888	8.27129	HOX{A6,A7,B6,B7}.p2	NM_213728|Krt72-ps|105866|keratin 72, pseudogene
mm9_v1_chr16_+_37884098_37884244	8.24698	HOX{A6,A7,B6,B7}.p2	AK052834|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr3_-_109946095_109946180	8.24141	HOX{A6,A7,B6,B7}.p2	AB038667|Ntng1|80883|netrin G1	AK173075|Ntng1|80883|netrin G1
mm9_v1_chr19_-_44624857_44624862	8.20234	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_110798661_110798666	8.19799	HOX{A6,A7,B6,B7}.p2	AK019916|Meg3|17263|maternally expressed 3
mm9_v1_chrX_-_9793824_9794045	8.18074	HOX{A6,A7,B6,B7}.p2	AJ238396|Rpgr|19893|retinitis pigmentosa GTPase regulator	AF044677|Rpgr|19893|retinitis pigmentosa GTPase regulator	BC012661|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK136298|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK017192|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK081631|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK038652|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177950|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177951|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177953|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177954|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_011285|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK029864|Rpgr|19893|retinitis pigmentosa GTPase regulator
mm9_v1_chr14_-_119322244_119322388	8.16418	HOX{A6,A7,B6,B7}.p2	AK129256|Dzip1|66573|DAZ interacting protein 1	NM_025943|Dzip1|66573|DAZ interacting protein 1
mm9_v1_chr18_+_23912225_23912225	8.15743	HOX{A6,A7,B6,B7}.p2	AK028823|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162941|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr10_+_85763267_85763281	8.1536	HOX{A6,A7,B6,B7}.p2	Z30970|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr12_-_103056971_103057106	8.15287	HOX{A6,A7,B6,B7}.p2	AK208765|Fbln5|23876|fibulin 5	AK178699|Fbln5|23876|fibulin 5	BC006636|Fbln5|23876|fibulin 5	AK159189|Fbln5|23876|fibulin 5
mm9_v1_chr8_+_91115856_91115922	8.15231	HOX{A6,A7,B6,B7}.p2	AK192443|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AK193874|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr10_-_12581443_12581532	8.10843	HOX{A6,A7,B6,B7}.p2	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr1_-_162133574_162133640	8.09303	HOX{A6,A7,B6,B7}.p2	AK164472|Cacybp|12301|calcyclin binding protein
mm9_v1_chr1_-_170362298_170362315	8.06917	HOX{A6,A7,B6,B7}.p2	AK045252|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144346|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144446|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr1_+_152166546_152166560	8.0619	HOX{A6,A7,B6,B7}.p2	AK020798|Pdc|20028|phosducin	L08075|Pdc|20028|phosducin	NM_001159730|Pdc|20028|phosducin	NM_024458|Pdc|20028|phosducin	BC021920|Pdc|20028|phosducin	BC037176|Pdc|20028|phosducin	BC012507|Pdc|20028|phosducin
mm9_v1_chr6_-_25639812_25639825	8.06156	HOX{A6,A7,B6,B7}.p2	AK032525|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr10_+_85763156_85763226	8.04406	HOX{A6,A7,B6,B7}.p2	NM_011595|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr1_-_172040621_172040689	8.01508	HOX{A6,A7,B6,B7}.p2	BC138826|Ddr2|18214|discoidin domain receptor family, member 2	BC138827|Ddr2|18214|discoidin domain receptor family, member 2	X76505|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr1_+_196446006_196446022	8.01275	HOX{A6,A7,B6,B7}.p2	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr12_+_110783593_110783620	8.01158	HOX{A6,A7,B6,B7}.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr11_+_92960603_92960762	8.01066	HOX{A6,A7,B6,B7}.p2	AK036003|Car10|72605|carbonic anhydrase 10	NM_028296|Car10|72605|carbonic anhydrase 10	AK132222|Car10|72605|carbonic anhydrase 10
mm9_v1_chr19_-_14672472_14672537	7.96672	HOX{A6,A7,B6,B7}.p2	AK017548|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	NM_011600|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr1_+_44200032_44200079	7.95107	HOX{A6,A7,B6,B7}.p2	AK088931|Bivm|246229|basic, immunoglobulin-like variable motif containing
mm9_v1_chr13_-_98786061_98786107	7.92808	HOX{A6,A7,B6,B7}.p2	AK048676|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr10_+_98478207_98478246	7.91781	HOX{A6,A7,B6,B7}.p2	BC025199|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr2_+_78710638_78710757	7.91051	HOX{A6,A7,B6,B7}.p2	AF003346|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr17_-_14831095_14831102	7.90163	HOX{A6,A7,B6,B7}.p2	L07803|Thbs2|21826|thrombospondin 2	M64866|Thbs2|21826|thrombospondin 2	AK132508|Thbs2|21826|thrombospondin 2
mm9_v1_chr1_+_148342795_148342819	7.8834	HOX{A6,A7,B6,B7}.p2	AK046878|Fam5c|215378|family with sequence similarity 5, member C	NM_153539|Fam5c|215378|family with sequence similarity 5, member C	BC099956|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr13_+_55827167_55827225	7.8494	HOX{A6,A7,B6,B7}.p2	AK209800|Txndc15|69672|thioredoxin domain containing 15	AK213704|Txndc15|69672|thioredoxin domain containing 15	AK206830|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chrX_+_20276404_20276539	7.83961	HOX{A6,A7,B6,B7}.p2	AK177013|Cdk16|18555|cyclin-dependent kinase 16	AK212751|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr2_-_13413502_13413502	7.83917	HOX{A6,A7,B6,B7}.p2	NM_001081084|Cubn|65969|cubilin (intrinsic factor-cobalamin receptor)
mm9_v1_chr9_-_83040061_83040223	7.82212	HOX{A6,A7,B6,B7}.p2	AK002970|Hmgn3|94353|high mobility group nucleosomal binding domain 3	BC005693|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK003272|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK153223|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_026122|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_175074|Hmgn3|94353|high mobility group nucleosomal binding domain 3
mm9_v1_chrX_+_135751704_135751704	7.79661	HOX{A6,A7,B6,B7}.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr3_+_66023884_66023904	7.78045	HOX{A6,A7,B6,B7}.p2	X83601|Ptx3|19288|pentraxin related gene
mm9_v1_chr1_-_132625829_132625829	7.77208	HOX{A6,A7,B6,B7}.p2	AK029659|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_001162415|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr18_+_37673305_37673473	7.74387	HOX{A6,A7,B6,B7}.p2	AK134846|Pcdhb21|93892|protocadherin beta 21	NM_053146|Pcdhb21|93892|protocadherin beta 21	BC138121|Pcdhb21|93892|protocadherin beta 21	BC138122|Pcdhb21|93892|protocadherin beta 21	AF326314|Pcdhb21|93892|protocadherin beta 21	AY013783|Pcdhb21|93892|protocadherin beta 21
mm9_v1_chr17_-_14831058_14831092	7.7217	HOX{A6,A7,B6,B7}.p2	BC053702|Thbs2|21826|thrombospondin 2
mm9_v1_chr6_+_30758582_30758676	7.71591	HOX{A6,A7,B6,B7}.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr5_+_27231234_27231317	7.70427	HOX{A6,A7,B6,B7}.p2	AK051708|Dpp6|13483|dipeptidylpeptidase 6	BC085154|Dpp6|13483|dipeptidylpeptidase 6	NM_001198886|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr18_+_65237084_65237096	7.68454	HOX{A6,A7,B6,B7}.p2	AK163497|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr16_+_17045125_17045167	7.68074	HOX{A6,A7,B6,B7}.p2	AK163692|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr11_+_3230733_3230843	7.6781	HOX{A6,A7,B6,B7}.p2	NM_178149|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK028419|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK029304|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK154842|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK005141|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK160300|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528081|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC055920|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC079641|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528078|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC028479|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1
mm9_v1_chrX_-_49034778_49034778	7.66873	HOX{A6,A7,B6,B7}.p2	NM_001077202|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr12_-_82434150_82434166	7.65713	HOX{A6,A7,B6,B7}.p2	AK139260|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AF453257|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AK044636|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_001167920|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_080440|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3
mm9_v1_chr11_-_68635236_68635451	7.65457	HOX{A6,A7,B6,B7}.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr9_+_47338255_47338425	7.6289	HOX{A6,A7,B6,B7}.p2	BC090970|Cadm1|54725|cell adhesion molecule 1	AF434663|Cadm1|54725|cell adhesion molecule 1	AK013911|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr5_-_92872646_92872657	7.62214	HOX{A6,A7,B6,B7}.p2	AK034388|Scarb2|12492|scavenger receptor class B, member 2
mm9_v1_chr14_-_13178341_13178378	7.60606	HOX{A6,A7,B6,B7}.p2	AK019996|Fezf2|54713|Fez family zinc finger 2	BC055718|Fezf2|54713|Fez family zinc finger 2	NM_080433|Fezf2|54713|Fez family zinc finger 2
mm9_v1_chr4_-_126540249_126540348	7.60504	HOX{A6,A7,B6,B7}.p2	AK018207|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr8_+_119984482_119984512	7.57879	HOX{A6,A7,B6,B7}.p2	AK020023|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr11_-_87172419_87172533	7.55063	HOX{A6,A7,B6,B7}.p2	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr4_-_82151180_82151288	7.54489	HOX{A6,A7,B6,B7}.p2	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr12_+_37040755_37040991	7.5421	HOX{A6,A7,B6,B7}.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr4_+_28740314_28740475	7.53226	HOX{A6,A7,B6,B7}.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr15_+_12808445_12808493	7.5322	HOX{A6,A7,B6,B7}.p2	BC040801|Drosha|14000|drosha, ribonuclease type III
mm9_v1_chr11_-_106642357_106642481	7.52032	HOX{A6,A7,B6,B7}.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr11_-_51799215_51799347	7.50604	HOX{A6,A7,B6,B7}.p2	AK190260|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr17_+_44090139_44090183	7.49419	HOX{A6,A7,B6,B7}.p2	BC049096|Rcan2|53901|regulator of calcineurin 2	NM_030598|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr9_+_108698323_108698461	7.4828	HOX{A6,A7,B6,B7}.p2	BC039922|Ip6k2|76500|inositol hexaphosphate kinase 2	NM_029634|Ip6k2|76500|inositol hexaphosphate kinase 2	BC060059|Ip6k2|76500|inositol hexaphosphate kinase 2
mm9_v1_chr5_+_89012600_89012641	7.4666	HOX{A6,A7,B6,B7}.p2	AK045610|Rufy3|52822|RUN and FYVE domain containing 3	AK083242|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr3_-_109946355_109946392	7.46224	HOX{A6,A7,B6,B7}.p2	BC079881|Ntng1|80883|netrin G1	NM_001163348|Ntng1|80883|netrin G1	NM_001163349|Ntng1|80883|netrin G1	NM_001163350|Ntng1|80883|netrin G1	NM_001163351|Ntng1|80883|netrin G1	NM_030699|Ntng1|80883|netrin G1	NM_133488|Ntng1|80883|netrin G1	AK134467|Ntng1|80883|netrin G1
mm9_v1_chr11_-_3995299_3995466	7.44874	HOX{A6,A7,B6,B7}.p2	AK167990|Mtfp1|67900|mitochondrial fission process 1	AK006148|Mtfp1|67900|mitochondrial fission process 1	BC058737|Mtfp1|67900|mitochondrial fission process 1	AK010971|Mtfp1|67900|mitochondrial fission process 1	AK012058|Mtfp1|67900|mitochondrial fission process 1	AK078381|Mtfp1|67900|mitochondrial fission process 1	NM_026443|Mtfp1|67900|mitochondrial fission process 1
mm9_v1_chr15_-_98783909_98783984	7.4358	HOX{A6,A7,B6,B7}.p2	M13445|Tuba1a|22142|tubulin, alpha 1A	NM_011653|Tuba1a|22142|tubulin, alpha 1A	AK077529|Tuba1a|22142|tubulin, alpha 1A	BC056169|Tuba1a|22142|tubulin, alpha 1A	BC083344|Tuba1a|22142|tubulin, alpha 1A	BC083343|Tuba1a|22142|tubulin, alpha 1A	BC085256|Tuba1a|22142|tubulin, alpha 1A	BC083345|Tuba1a|22142|tubulin, alpha 1A	AK145404|Tuba1a|22142|tubulin, alpha 1A	AK146983|Tuba1a|22142|tubulin, alpha 1A	AK167687|Tuba1a|22142|tubulin, alpha 1A	AK168762|Tuba1a|22142|tubulin, alpha 1A	AK169610|Tuba1a|22142|tubulin, alpha 1A	AK164335|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr1_-_160286359_160286472	7.42634	HOX{A6,A7,B6,B7}.p2	BC067038|Fam5b|240843|family with sequence similarity 5, member B	BC076572|Fam5b|240843|family with sequence similarity 5, member B	NM_207583|Fam5b|240843|family with sequence similarity 5, member B	AK032297|Fam5b|240843|family with sequence similarity 5, member B	AK047824|Fam5b|240843|family with sequence similarity 5, member B	AK122549|Fam5b|240843|family with sequence similarity 5, member B
mm9_v1_chr11_+_89891661_89891661	7.40861	HOX{A6,A7,B6,B7}.p2	AK007878|Tmem100|67888|transmembrane protein 100	NM_026433|Tmem100|67888|transmembrane protein 100
mm9_v1_chr15_+_12082671_12082674	7.39595	HOX{A6,A7,B6,B7}.p2	AK158938|Zfr|22763|zinc finger RNA binding protein
mm9_v1_chr3_-_27795287_27795289	7.38947	HOX{A6,A7,B6,B7}.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr2_-_151458256_151458277	7.38333	HOX{A6,A7,B6,B7}.p2	AK032279|Snph|241727|syntaphilin	AK122262|Snph|241727|syntaphilin	NM_198214|Snph|241727|syntaphilin
mm9_v1_chr8_+_112465553_112465555	7.37649	HOX{A6,A7,B6,B7}.p2	AK146878|Phlpp2|244650|PH domain and leucine rich repeat protein phosphatase 2
mm9_v1_chr3_-_80606704_80606756	7.34216	HOX{A6,A7,B6,B7}.p2	AK163941|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK046861|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001039195|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001083806|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_013540|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK014389|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr7_-_117509277_117509385	7.32765	HOX{A6,A7,B6,B7}.p2	BC015069|Sbf2|319934|SET binding factor 2
mm9_v1_chr14_+_80400057_80400108	7.32213	HOX{A6,A7,B6,B7}.p2	BC141127|Olfm4|380924|olfactomedin 4	BC145436|Olfm4|380924|olfactomedin 4	AK133536|Olfm4|380924|olfactomedin 4	NM_001030294|Olfm4|380924|olfactomedin 4
mm9_v1_chr11_+_94871620_94871635	7.30852	HOX{A6,A7,B6,B7}.p2	BC049954|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr19_-_5797749_5797761	7.29495	HOX{A6,A7,B6,B7}.p2	AK141413|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr18_-_75857207_75857349	7.274	HOX{A6,A7,B6,B7}.p2	BC058104|Ctif|269037|CBP80/20-dependent translation initiation factor	NM_201354|Ctif|269037|CBP80/20-dependent translation initiation factor
mm9_v1_chr3_+_51299153_51299205	7.26414	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_75169426_75169445	7.25479	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_74346853_74346867	7.20505	HOX{A6,A7,B6,B7}.p2	AK147600|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr5_+_27588579_27588623	7.19283	HOX{A6,A7,B6,B7}.p2	BC048383|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr3_+_90341208_90341304	7.19235	HOX{A6,A7,B6,B7}.p2	AK160178|S100a16|67860|S100 calcium binding protein A16	AK009762|S100a16|67860|S100 calcium binding protein A16	AK160512|S100a16|67860|S100 calcium binding protein A16	AK167006|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr2_-_151458299_151458319	7.17438	HOX{A6,A7,B6,B7}.p2	AK047595|Snph|241727|syntaphilin	AK138230|Snph|241727|syntaphilin	AK047568|Snph|241727|syntaphilin
mm9_v1_chr10_+_73284612_73284690	7.17382	HOX{A6,A7,B6,B7}.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr6_-_116666759_116666930	7.16993	HOX{A6,A7,B6,B7}.p2	BC116440|Tmem72|319776|transmembrane protein 72	BC116441|Tmem72|319776|transmembrane protein 72	AK085603|Tmem72|319776|transmembrane protein 72	NM_178768|Tmem72|319776|transmembrane protein 72	AK049938|Tmem72|319776|transmembrane protein 72	AK033856|Tmem72|319776|transmembrane protein 72	BC093486|Tmem72|319776|transmembrane protein 72	AK049048|Tmem72|319776|transmembrane protein 72	AK141578|Tmem72|319776|transmembrane protein 72
mm9_v1_chr3_-_95032589_95032623	7.16181	HOX{A6,A7,B6,B7}.p2	AK152708|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	NM_019914|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr11_-_120489993_120490076	7.15112	HOX{A6,A7,B6,B7}.p2	AK038934|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	AK083165|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chrX_+_16196823_16196987	7.14516	HOX{A6,A7,B6,B7}.p2	AK146612|Maoa|17161|monoamine oxidase A	NM_173740|Maoa|17161|monoamine oxidase A	BC029100|Maoa|17161|monoamine oxidase A	AK004337|Maoa|17161|monoamine oxidase A	AK155052|Maoa|17161|monoamine oxidase A	AK164457|Maoa|17161|monoamine oxidase A
mm9_v1_chr8_-_9771020_9771022	7.14187	HOX{A6,A7,B6,B7}.p2	BC117535|Fam155a|270028|family with sequence similarity 155, member A	AK032202|Fam155a|270028|family with sequence similarity 155, member A	NM_173446|Fam155a|270028|family with sequence similarity 155, member A
mm9_v1_chr2_+_143371807_143372226	7.1395	HOX{A6,A7,B6,B7}.p2	AK158598|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK133620|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	NM_008792|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC057348|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK158493|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK161585|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC052013|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK039783|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	M55669|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483512|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483513|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2
mm9_v1_chr14_+_34767188_34767245	7.12823	HOX{A6,A7,B6,B7}.p2	BC083133|Rbp3|19661|retinol binding protein 3, interstitial	BC017610|Rbp3|19661|retinol binding protein 3, interstitial	NM_015745|Rbp3|19661|retinol binding protein 3, interstitial	BC040282|Rbp3|19661|retinol binding protein 3, interstitial	BC042480|Rbp3|19661|retinol binding protein 3, interstitial
mm9_v1_chr3_+_51299646_51299685	7.12124	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_+_48283430_48283453	7.11489	HOX{A6,A7,B6,B7}.p2	NM_008477|Ktn1|16709|kinectin 1	L43326|Ktn1|16709|kinectin 1
mm9_v1_chr11_-_55233354_55233357	7.10705	HOX{A6,A7,B6,B7}.p2	BC004638|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr9_+_47338431_47338446	7.07887	HOX{A6,A7,B6,B7}.p2	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr11_+_77744280_77744540	7.06947	HOX{A6,A7,B6,B7}.p2	AK165757|Sez6|20370|seizure related gene 6	BC055345|Sez6|20370|seizure related gene 6	AK220513|Sez6|20370|seizure related gene 6	AB206791|Sez6|20370|seizure related gene 6	AK032277|Sez6|20370|seizure related gene 6	AK147705|Sez6|20370|seizure related gene 6	BC053011|Sez6|20370|seizure related gene 6	NM_021286|Sez6|20370|seizure related gene 6	D29763|Sez6|20370|seizure related gene 6	D64009|Sez6|20370|seizure related gene 6	D64010|Sez6|20370|seizure related gene 6
mm9_v1_chr1_-_59220232_59220232	7.06889	HOX{A6,A7,B6,B7}.p2	AK044682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	NM_001164682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm9_v1_chr9_-_53823107_53823121	7.0564	HOX{A6,A7,B6,B7}.p2	AK132239|Elmod1|270162|ELMO domain containing 1	NM_177769|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr9_+_56266618_56266679	7.05557	HOX{A6,A7,B6,B7}.p2	AK088542|Hmg20a|66867|high mobility group 20A	AK032790|Hmg20a|66867|high mobility group 20A	AK039222|Hmg20a|66867|high mobility group 20A	AK004596|Hmg20a|66867|high mobility group 20A	AK086346|Hmg20a|66867|high mobility group 20A	AK154075|Hmg20a|66867|high mobility group 20A	BC013804|Hmg20a|66867|high mobility group 20A	DQ182735|Hmg20a|66867|high mobility group 20A	NM_025812|Hmg20a|66867|high mobility group 20A	AL355705|Hmg20a|66867|high mobility group 20A
mm9_v1_chr4_+_149022081_149022141	7.04659	HOX{A6,A7,B6,B7}.p2	AK007691|Clstn1|65945|calsyntenin 1
mm9_v1_chr11_+_56825258_56825293	7.03651	HOX{A6,A7,B6,B7}.p2	X57497|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr4_+_149022266_149022381	7.03443	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_99250663_99250679	7.03175	HOX{A6,A7,B6,B7}.p2	AK014360|Krt10|16661|keratin 10	V00830|Krt10|16661|keratin 10	AK076508|Krt10|16661|keratin 10	AK081914|Krt10|16661|keratin 10	AK081402|Krt10|16661|keratin 10	NM_010660|Krt10|16661|keratin 10
mm9_v1_chr3_+_66023808_66023844	7.01602	HOX{A6,A7,B6,B7}.p2	NM_008987|Ptx3|19288|pentraxin related gene	BC022176|Ptx3|19288|pentraxin related gene
mm9_v1_chr16_-_22811458_22811482	7.01015	HOX{A6,A7,B6,B7}.p2	BC056452|Crygs|12970|crystallin, gamma S	AF032995|Crygs|12970|crystallin, gamma S	AK143060|Crygs|12970|crystallin, gamma S	NM_009967|Crygs|12970|crystallin, gamma S
mm9_v1_chr15_+_101042440_101042460	7.00728	HOX{A6,A7,B6,B7}.p2	AK078525|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr7_+_53339469_53339531	7.00034	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_72330942_72330988	6.99842	HOX{A6,A7,B6,B7}.p2	AK034935|Tmem169|271711|transmembrane protein 169	AK043681|Tmem169|271711|transmembrane protein 169	NM_175564|Tmem169|271711|transmembrane protein 169	AK084021|Tmem169|271711|transmembrane protein 169
mm9_v1_chr9_+_62705890_62705945	6.99358	HOX{A6,A7,B6,B7}.p2	AY061807|Calml4|75600|calmodulin-like 4	NM_001102468|Calml4|75600|calmodulin-like 4	NM_138304|Calml4|75600|calmodulin-like 4	AK008039|Calml4|75600|calmodulin-like 4	BC013541|Calml4|75600|calmodulin-like 4	AK146656|Calml4|75600|calmodulin-like 4	BC023475|Calml4|75600|calmodulin-like 4
mm9_v1_chr18_+_37637421_37637642	6.99208	HOX{A6,A7,B6,B7}.p2	NM_053141|Pcdhb16|93887|protocadherin beta 16	AK030612|Pcdhb16|93887|protocadherin beta 16	AK036829|Pcdhb16|93887|protocadherin beta 16	BC115720|Pcdhb16|93887|protocadherin beta 16	BC116625|Pcdhb16|93887|protocadherin beta 16	AY013777|Pcdhb16|93887|protocadherin beta 16
mm9_v1_chr11_+_100182042_100182059	6.98219	HOX{A6,A7,B6,B7}.p2	Z50159|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr11_+_94871643_94871672	6.95836	HOX{A6,A7,B6,B7}.p2	AK044765|Samd14|217125|sterile alpha motif domain containing 14	BC034054|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr11_+_56825307_56825536	6.94994	HOX{A6,A7,B6,B7}.p2	AK049958|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC056397|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102773|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102774|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC060702|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr15_+_74346835_74346839	6.94767	HOX{A6,A7,B6,B7}.p2	AK147494|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr11_+_34214821_34214821	6.93573	HOX{A6,A7,B6,B7}.p2	BC072605|Fam196b|574403|family with sequence similarity 196, member B	NM_001025382|Fam196b|574403|family with sequence similarity 196, member B
mm9_v1_chr7_-_77511242_77511282	6.92517	HOX{A6,A7,B6,B7}.p2	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr5_-_100407805_100407989	6.89838	HOX{A6,A7,B6,B7}.p2	U11273|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	AK135733|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	AK077409|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	BC049098|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_001077265|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_001077266|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_001077267|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D	NM_007516|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr6_+_121586190_121586250	6.88174	HOX{A6,A7,B6,B7}.p2	NM_175628|A2m|232345|alpha-2-macroglobulin	AY185125|A2m|232345|alpha-2-macroglobulin	BC072642|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr6_-_120745390_120745474	6.87716	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_17045284_17045304	6.8769	HOX{A6,A7,B6,B7}.p2	AK018549|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr15_+_74346624_74346672	6.86065	HOX{A6,A7,B6,B7}.p2	AK147607|Bai1|107831|brain-specific angiogenesis inhibitor 1	NM_174991|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147456|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147459|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr11_-_109919796_109919831	6.81295	HOX{A6,A7,B6,B7}.p2	AK148846|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a	BC026496|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr15_+_99543952_99544029	6.80373	HOX{A6,A7,B6,B7}.p2	AK190322|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr13_-_58456221_58456222	6.80091	HOX{A6,A7,B6,B7}.p2	BC116646|Kif27|75050|kinesin family member 27	NM_175214|Kif27|75050|kinesin family member 27
mm9_v1_chr14_-_73762933_73762949	6.78984	HOX{A6,A7,B6,B7}.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr6_-_93863547_93863683	6.76922	HOX{A6,A7,B6,B7}.p2	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr19_-_44470218_44470225	6.76732	HOX{A6,A7,B6,B7}.p2	AK163960|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr7_-_88638789_88638810	6.75664	HOX{A6,A7,B6,B7}.p2	NM_021492|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit
mm9_v1_chr5_-_108304062_108304125	6.73234	HOX{A6,A7,B6,B7}.p2	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr7_+_62090867_62091039	6.71032	HOX{A6,A7,B6,B7}.p2	AK082126|Luzp2|233271|leucine zipper protein 2	AK032204|Luzp2|233271|leucine zipper protein 2	AK034240|Luzp2|233271|leucine zipper protein 2	BC075646|Luzp2|233271|leucine zipper protein 2	AK034077|Luzp2|233271|leucine zipper protein 2
mm9_v1_chrX_+_132779615_132779721	6.70534	HOX{A6,A7,B6,B7}.p2	NM_011712|Wbp5|22381|WW domain binding protein 5	AY459189|Wbp5|22381|WW domain binding protein 5	AK017717|Wbp5|22381|WW domain binding protein 5	AK002214|Wbp5|22381|WW domain binding protein 5	BC020289|Wbp5|22381|WW domain binding protein 5	BC007478|Wbp5|22381|WW domain binding protein 5
mm9_v1_chr18_-_23197156_23197163	6.6684	HOX{A6,A7,B6,B7}.p2	BC056377|Nol4|319211|nucleolar protein 4	NM_001161483|Nol4|319211|nucleolar protein 4
mm9_v1_chr7_+_112706171_112706777	6.65343	HOX{A6,A7,B6,B7}.p2	AK205297|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK206661|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK214733|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK212303|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK182658|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK205584|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK190375|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK195882|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK180590|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK205699|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal
mm9_v1_chr14_-_94289847_94289904	6.64525	HOX{A6,A7,B6,B7}.p2	BC060736|Pcdh9|211712|protocadherin 9	AK147451|Pcdh9|211712|protocadherin 9
mm9_v1_chr18_-_34738725_34738759	6.64462	HOX{A6,A7,B6,B7}.p2	AK006111|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC049625|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK131722|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_080637|Nme5|75533|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr5_-_45190857_45190945	6.63785	HOX{A6,A7,B6,B7}.p2	U89487|Ldb2|16826|LIM domain binding 2	U89489|Ldb2|16826|LIM domain binding 2	BC079611|Ldb2|16826|LIM domain binding 2	AK147160|Ldb2|16826|LIM domain binding 2	AK146860|Ldb2|16826|LIM domain binding 2	NM_001077398|Ldb2|16826|LIM domain binding 2	NM_010698|Ldb2|16826|LIM domain binding 2
mm9_v1_chrX_-_47141382_47141419	6.63376	HOX{A6,A7,B6,B7}.p2	BC119264|Igsf1|209268|immunoglobulin superfamily, member 1	BC119266|Igsf1|209268|immunoglobulin superfamily, member 1	BC144762|Igsf1|209268|immunoglobulin superfamily, member 1	AK076427|Igsf1|209268|immunoglobulin superfamily, member 1	AY227774|Igsf1|209268|immunoglobulin superfamily, member 1	AK030701|Igsf1|209268|immunoglobulin superfamily, member 1	NM_183336|Igsf1|209268|immunoglobulin superfamily, member 1
mm9_v1_chr7_+_31278675_31278685	6.62871	HOX{A6,A7,B6,B7}.p2	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr6_-_120745648_120745709	6.60796	HOX{A6,A7,B6,B7}.p2	AK201997|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK196381|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1
mm9_v1_chr6_-_112896894_112896953	6.60676	HOX{A6,A7,B6,B7}.p2	AK122276|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr2_+_177910053_177910084	6.58728	HOX{A6,A7,B6,B7}.p2	AJ632221|Phactr3|74189|phosphatase and actin regulator 3	NM_001177791|Phactr3|74189|phosphatase and actin regulator 3	AK005136|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr10_-_126495351_126495372	6.56761	HOX{A6,A7,B6,B7}.p2	BC019560|March9|216438|membrane-associated ring finger (C3HC4) 9
mm9_v1_chr11_+_56825192_56825257	6.55407	HOX{A6,A7,B6,B7}.p2	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr16_-_5013596_5013670	6.54097	HOX{A6,A7,B6,B7}.p2	AK046477|Rogdi|66049|rogdi homolog (Drosophila)	AK170144|Rogdi|66049|rogdi homolog (Drosophila)	AY036117|Rogdi|66049|rogdi homolog (Drosophila)	BC006914|Rogdi|66049|rogdi homolog (Drosophila)	AK002523|Rogdi|66049|rogdi homolog (Drosophila)	NM_133185|Rogdi|66049|rogdi homolog (Drosophila)
mm9_v1_chr4_+_57907600_57907648	6.52869	HOX{A6,A7,B6,B7}.p2	BC034188|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chrX_-_153853209_153853243	6.52555	HOX{A6,A7,B6,B7}.p2	U49908|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	NM_011077|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	U73910|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	AK158481|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
mm9_v1_chr4_+_21775172_21775224	6.52457	HOX{A6,A7,B6,B7}.p2	AK162695|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK012036|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK031964|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK017507|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK020035|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK081407|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK083021|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK160288|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC060111|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chrX_+_155897056_155897081	6.51494	HOX{A6,A7,B6,B7}.p2	AK019929|Mtap7d2|78283|MAP7 domain containing 2	AK031868|Mtap7d2|78283|MAP7 domain containing 2	AK043342|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr1_-_55283618_55283625	6.48976	HOX{A6,A7,B6,B7}.p2	AK012229|Rftn2|74013|raftlin family member 2	AK031158|Rftn2|74013|raftlin family member 2	BC038341|Rftn2|74013|raftlin family member 2	NM_028713|Rftn2|74013|raftlin family member 2
mm9_v1_chr13_+_83663817_83664004	6.43387	HOX{A6,A7,B6,B7}.p2	AK036940|Mef2c|17260|myocyte enhancer factor 2C	AK077603|Mef2c|17260|myocyte enhancer factor 2C	AK172512|Mef2c|17260|myocyte enhancer factor 2C	AK172537|Mef2c|17260|myocyte enhancer factor 2C	AK047994|Mef2c|17260|myocyte enhancer factor 2C	AK043267|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr14_-_49282546_49282546	6.42897	HOX{A6,A7,B6,B7}.p2	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr4_+_88495990_88495990	6.41805	HOX{A6,A7,B6,B7}.p2	NM_010502|Ifna1|15962|interferon alpha 1
mm9_v1_chr9_-_49606959_49607009	6.41479	HOX{A6,A7,B6,B7}.p2	AK053403|Ncam1|17967|neural cell adhesion molecule 1	BC062942|Ncam1|17967|neural cell adhesion molecule 1	X15049|Ncam1|17967|neural cell adhesion molecule 1	Y00051|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr6_+_83115900_83115968	6.41291	HOX{A6,A7,B6,B7}.p2	NM_001198866|Dctn1|13191|dynactin 1	NM_001198867|Dctn1|13191|dynactin 1	AK171376|Dctn1|13191|dynactin 1	BC066061|Dctn1|13191|dynactin 1	AK172261|Dctn1|13191|dynactin 1
mm9_v1_chr9_+_109905895_109906037	6.40682	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_-_129525375_129525422	6.40167	HOX{A6,A7,B6,B7}.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr3_+_68272097_68272120	6.39476	HOX{A6,A7,B6,B7}.p2	AK083464|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr5_+_117827904_117828056	6.38629	HOX{A6,A7,B6,B7}.p2	AK195234|Wsb2|59043|WD repeat and SOCS box-containing 2	AK198504|Wsb2|59043|WD repeat and SOCS box-containing 2	AK206996|Wsb2|59043|WD repeat and SOCS box-containing 2	AK210681|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chr19_+_8667671_8667730	6.38447	HOX{A6,A7,B6,B7}.p2	NM_001164635|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK157891|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	BC014762|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK044336|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AF078869|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8
mm9_v1_chr5_+_14514906_14514924	6.38271	HOX{A6,A7,B6,B7}.p2	NM_001110796|Pclo|26875|piccolo (presynaptic cytomatrix protein)	NM_011995|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19185|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19186|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr3_+_129235284_129235325	6.37559	HOX{A6,A7,B6,B7}.p2	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr2_+_163843294_163843512	6.37148	HOX{A6,A7,B6,B7}.p2	AK206846|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK207996|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK212148|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK214843|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK215126|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK219468|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr10_+_126827366_126827366	6.34326	HOX{A6,A7,B6,B7}.p2	NM_001168292|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr2_+_177927788_177927833	6.33328	HOX{A6,A7,B6,B7}.p2	AJ632222|Phactr3|74189|phosphatase and actin regulator 3	NM_001007154|Phactr3|74189|phosphatase and actin regulator 3	AK038449|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chrX_+_131252542_131252558	6.33119	HOX{A6,A7,B6,B7}.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chrX_+_166123130_166123181	6.32858	HOX{A6,A7,B6,B7}.p2	AK160120|Mid1|17318|midline 1	NM_010797|Mid1|17318|midline 1	Y14848|Mid1|17318|midline 1
mm9_v1_chr9_-_21820860_21820861	6.32627	HOX{A6,A7,B6,B7}.p2	AK134781|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr18_+_37678006_37678134	6.3242	HOX{A6,A7,B6,B7}.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chr19_-_12840121_12840121	6.30465	HOX{A6,A7,B6,B7}.p2	BC027539|Cntf|12803|ciliary neurotrophic factor	NM_170786|Cntf|12803|ciliary neurotrophic factor
mm9_v1_chr7_-_140206929_140206929	6.29653	HOX{A6,A7,B6,B7}.p2	NM_001170744|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr7_+_31278689_31278695	6.28519	HOX{A6,A7,B6,B7}.p2	AF222851|Prodh2|56189|proline dehydrogenase (oxidase) 2	BC018182|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr19_-_34952328_34952347	6.27948	HOX{A6,A7,B6,B7}.p2	BC023496|Pank1|75735|pantothenate kinase 1
mm9_v1_chr10_+_21712008_21712034	6.27222	HOX{A6,A7,B6,B7}.p2	NM_001161849|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr5_+_81450617_81450617	6.26732	HOX{A6,A7,B6,B7}.p2	BC088989|Lphn3|319387|latrophilin 3	NM_198702|Lphn3|319387|latrophilin 3
mm9_v1_chr13_+_42804911_42805054	6.25738	HOX{A6,A7,B6,B7}.p2	BC048407|Phactr1|218194|phosphatase and actin regulator 1	BC061691|Phactr1|218194|phosphatase and actin regulator 1	NM_001005740|Phactr1|218194|phosphatase and actin regulator 1	AK048208|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr2_+_90858663_90858815	6.21653	HOX{A6,A7,B6,B7}.p2	AK080832|Celf1|13046|CUGBP, Elav-like family member 1	AK160135|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr11_-_81781897_81781910	6.19528	HOX{A6,A7,B6,B7}.p2	NM_001034013|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	AK134778|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	AF348465|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)
mm9_v1_chr6_-_119058206_119058206	6.1922	HOX{A6,A7,B6,B7}.p2	BC138031|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145103|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145104|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC145105|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159533|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159534|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001159535|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr9_-_110018085_110018088	6.19194	HOX{A6,A7,B6,B7}.p2	AB047557|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_133347|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC058331|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr11_-_11798101_11798104	6.19059	HOX{A6,A7,B6,B7}.p2	BC060989|Ddc|13195|dopa decarboxylase
mm9_v1_chr12_+_56937357_56937396	6.18677	HOX{A6,A7,B6,B7}.p2	BC034885|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr1_-_173165051_173165079	6.16992	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_83880574_83880586	6.16394	HOX{A6,A7,B6,B7}.p2	AK009744|Dusp14|56405|dual specificity phosphatase 14
mm9_v1_chr18_+_37890662_37890807	6.15505	HOX{A6,A7,B6,B7}.p2	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr11_+_115168476_115168476	6.14991	HOX{A6,A7,B6,B7}.p2	AK028866|Otop2|237987|otopetrin 2	NM_172801|Otop2|237987|otopetrin 2
mm9_v1_chr18_+_37179802_37179999	6.13961	HOX{A6,A7,B6,B7}.p2	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr3_+_66789587_66789619	6.1337	HOX{A6,A7,B6,B7}.p2	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr11_-_98590680_98590748	6.12985	HOX{A6,A7,B6,B7}.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr10_+_85763287_85763288	6.11378	HOX{A6,A7,B6,B7}.p2	L27424|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr14_-_37862119_37862149	6.0925	HOX{A6,A7,B6,B7}.p2	AF076930|Rgr|57811|retinal G protein coupled receptor	BC086689|Rgr|57811|retinal G protein coupled receptor	BC119055|Rgr|57811|retinal G protein coupled receptor	BC082611|Rgr|57811|retinal G protein coupled receptor	AK044450|Rgr|57811|retinal G protein coupled receptor	AK044649|Rgr|57811|retinal G protein coupled receptor	AK149272|Rgr|57811|retinal G protein coupled receptor	NM_021340|Rgr|57811|retinal G protein coupled receptor
mm9_v1_chr3_+_133902563_133902608	6.06388	HOX{A6,A7,B6,B7}.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr1_+_42752608_42752622	6.06339	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_7162595_7162622	6.06241	HOX{A6,A7,B6,B7}.p2	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr17_+_86567003_86567165	6.05959	HOX{A6,A7,B6,B7}.p2	AK082438|Prkce|18754|protein kinase C, epsilon	NM_011104|Prkce|18754|protein kinase C, epsilon	AK042994|Prkce|18754|protein kinase C, epsilon
mm9_v1_chr4_-_42541768_42541768	6.0329	HOX{A6,A7,B6,B7}.p2	NM_001085530|Gm13298|545611|predicted gene 13298
mm9_v1_chr1_-_39708086_39708119	6.02668	HOX{A6,A7,B6,B7}.p2	AK134861|Creg2|263764|cellular repressor of E1A-stimulated genes 2
mm9_v1_chr11_-_11832366_11832461	6.02537	HOX{A6,A7,B6,B7}.p2	BC033917|Grb10|14783|growth factor receptor bound protein 10	BC036389|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chrX_+_133357268_133357438	6.01601	HOX{A6,A7,B6,B7}.p2	AK160872|Plp1|18823|proteolipid protein (myelin) 1	AK134554|Plp1|18823|proteolipid protein (myelin) 1	M15442|Plp1|18823|proteolipid protein (myelin) 1	AK077564|Plp1|18823|proteolipid protein (myelin) 1	BC027010|Plp1|18823|proteolipid protein (myelin) 1	NM_011123|Plp1|18823|proteolipid protein (myelin) 1	AK192772|Plp1|18823|proteolipid protein (myelin) 1	AK203421|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr7_-_86531587_86531645	6.01463	HOX{A6,A7,B6,B7}.p2	BC016268|Rlbp1|19771|retinaldehyde binding protein 1	AK014227|Rlbp1|19771|retinaldehyde binding protein 1
mm9_v1_chr12_-_87419813_87420026	6.0026	HOX{A6,A7,B6,B7}.p2	AK148385|Tgfb3|21809|transforming growth factor, beta 3	BC094591|Tgfb3|21809|transforming growth factor, beta 3	BC089347|Tgfb3|21809|transforming growth factor, beta 3	AK132519|Tgfb3|21809|transforming growth factor, beta 3	AK145304|Tgfb3|21809|transforming growth factor, beta 3	BC108426|Tgfb3|21809|transforming growth factor, beta 3	NM_009368|Tgfb3|21809|transforming growth factor, beta 3
mm9_v1_chr14_+_65885454_65885579	5.98387	HOX{A6,A7,B6,B7}.p2	AK164657|Fbxo16|50759|F-box protein 16	AK081947|Fbxo16|50759|F-box protein 16	AF176531|Fbxo16|50759|F-box protein 16	NM_015795|Fbxo16|50759|F-box protein 16	AK043554|Fbxo16|50759|F-box protein 16	BC086690|Fbxo16|50759|F-box protein 16	BC115890|Fbxo16|50759|F-box protein 16
mm9_v1_chr10_+_85763294_85763302	5.97438	HOX{A6,A7,B6,B7}.p2	AK082483|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK128943|Timp3|21859|tissue inhibitor of metalloproteinase 3	AB041611|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK083905|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK147847|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr3_+_28162135_28162218	5.9638	HOX{A6,A7,B6,B7}.p2	BC050866|Tnik|665113|TRAF2 and NCK interacting kinase	BC050868|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163007|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163008|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163009|Tnik|665113|TRAF2 and NCK interacting kinase	NM_026910|Tnik|665113|TRAF2 and NCK interacting kinase	AK041777|Tnik|665113|TRAF2 and NCK interacting kinase	AK133568|Tnik|665113|TRAF2 and NCK interacting kinase	AK039113|Tnik|665113|TRAF2 and NCK interacting kinase
mm9_v1_chr4_+_80480116_80480211	5.94371	HOX{A6,A7,B6,B7}.p2	AK148332|Tyrp1|22178|tyrosinase-related protein 1	BC076598|Tyrp1|22178|tyrosinase-related protein 1	NM_031202|Tyrp1|22178|tyrosinase-related protein 1	X03687|Tyrp1|22178|tyrosinase-related protein 1	AK148370|Tyrp1|22178|tyrosinase-related protein 1	AK148441|Tyrp1|22178|tyrosinase-related protein 1
mm9_v1_chr13_+_49600158_49600323	5.92968	HOX{A6,A7,B6,B7}.p2	AK040995|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC089559|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	NM_001012324|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK134746|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK163501|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC056468|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC065151|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK038812|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific
mm9_v1_chr8_-_3624988_3625048	5.92622	HOX{A6,A7,B6,B7}.p2	AK003002|Pcp2|18545|Purkinje cell protein 2 (L7)	AK160398|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_001129804|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr8_+_120807674_120807696	5.91887	HOX{A6,A7,B6,B7}.p2	AK034995|Cdh13|12554|cadherin 13	AK085939|Cdh13|12554|cadherin 13	AK029195|Cdh13|12554|cadherin 13	AK134649|Cdh13|12554|cadherin 13
mm9_v1_chr1_-_142079842_142079987	5.91533	HOX{A6,A7,B6,B7}.p2	M31979|Cfh|12628|complement component factor h	BC066092|Cfh|12628|complement component factor h	AK087707|Cfh|12628|complement component factor h	M12660|Cfh|12628|complement component factor h	AK052688|Cfh|12628|complement component factor h	NM_009888|Cfh|12628|complement component factor h
mm9_v1_chr8_-_98412302_98412339	5.91406	HOX{A6,A7,B6,B7}.p2	BC089341|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK147953|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr10_+_34018323_34018472	5.89714	HOX{A6,A7,B6,B7}.p2	AK028517|Tspyl4|72480|TSPY-like 4
mm9_v1_chr3_-_126701320_126701358	5.88409	HOX{A6,A7,B6,B7}.p2	BC059251|Ank2|109676|ankyrin 2, brain	AK082352|Ank2|109676|ankyrin 2, brain
mm9_v1_chr6_+_121596815_121596927	5.8835	HOX{A6,A7,B6,B7}.p2	BC023844|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr13_-_54652983_54653158	5.87747	HOX{A6,A7,B6,B7}.p2	AK216925|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK206564|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK215484|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK216083|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK218676|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr18_+_37120093_37120209	5.87669	HOX{A6,A7,B6,B7}.p2	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr13_-_117099629_117099895	5.85858	HOX{A6,A7,B6,B7}.p2	AB104633|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AJ132765|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132609|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK044406|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK090263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK143052|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	NM_021459|Isl1|16392|ISL1 transcription factor, LIM/homeodomain
mm9_v1_chr16_+_91225794_91225820	5.84485	HOX{A6,A7,B6,B7}.p2	BC051967|Olig2|50913|oligodendrocyte transcription factor 2	NM_016967|Olig2|50913|oligodendrocyte transcription factor 2	AB038697|Olig2|50913|oligodendrocyte transcription factor 2	AK080615|Olig2|50913|oligodendrocyte transcription factor 2
mm9_v1_chr17_-_24210402_24210430	5.83402	HOX{A6,A7,B6,B7}.p2	BC021777|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK129077|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK143644|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chrX_+_91881454_91881500	5.80937	HOX{A6,A7,B6,B7}.p2	BC117825|Gspt2|14853|G1 to S phase transition 2	BC117826|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr2_-_121282428_121282516	5.80531	HOX{A6,A7,B6,B7}.p2	BC026459|Serinc4|574418|serine incorporator 4	BC083132|Serinc4|574418|serine incorporator 4	NM_001025371|Serinc4|574418|serine incorporator 4	AK044479|Serinc4|574418|serine incorporator 4
mm9_v1_chr3_-_84024766_84024812	5.78437	HOX{A6,A7,B6,B7}.p2	BC058668|Trim2|80890|tripartite motif-containing 2	AB043550|Trim2|80890|tripartite motif-containing 2	AK046887|Trim2|80890|tripartite motif-containing 2	AK147395|Trim2|80890|tripartite motif-containing 2	AK039741|Trim2|80890|tripartite motif-containing 2	AK045410|Trim2|80890|tripartite motif-containing 2	AK083057|Trim2|80890|tripartite motif-containing 2	NM_030706|Trim2|80890|tripartite motif-containing 2
mm9_v1_chr9_+_37015872_37015947	5.78311	HOX{A6,A7,B6,B7}.p2	AK161115|Tmem218|66279|transmembrane protein 218	BC034160|Tmem218|66279|transmembrane protein 218	NM_025464|Tmem218|66279|transmembrane protein 218	AK003010|Tmem218|66279|transmembrane protein 218	AK007575|Tmem218|66279|transmembrane protein 218	AK008902|Tmem218|66279|transmembrane protein 218
mm9_v1_chr11_+_79391766_79391883	5.77889	HOX{A6,A7,B6,B7}.p2	AK053047|Nf1|18015|neurofibromatosis 1
mm9_v1_chr17_-_37712365_37712392	5.76726	HOX{A6,A7,B6,B7}.p2	NM_146289|Olfr113|258286|olfactory receptor 113	BC132178|Olfr113|258286|olfactory receptor 113	BC132180|Olfr113|258286|olfactory receptor 113
mm9_v1_chr11_-_99283568_99283572	5.75956	HOX{A6,A7,B6,B7}.p2	BC131911|Krt12|268482|keratin 12	AK143182|Krt12|268482|keratin 12	U02880|Krt12|268482|keratin 12	AK053362|Krt12|268482|keratin 12	NM_010661|Krt12|268482|keratin 12
mm9_v1_chr18_-_77870871_77870990	5.75118	HOX{A6,A7,B6,B7}.p2	AK009215|2310007O11Rik|74177|RIKEN cDNA 2310007O11 gene
mm9_v1_chr8_-_89996474_89996540	5.74693	HOX{A6,A7,B6,B7}.p2	AK158818|Cbln1|12404|cerebellin 1 precursor protein	NM_019626|Cbln1|12404|cerebellin 1 precursor protein	AK158885|Cbln1|12404|cerebellin 1 precursor protein
mm9_v1_chr11_-_18918923_18918971	5.7344	HOX{A6,A7,B6,B7}.p2	AK032947|Meis1|17268|Meis homeobox 1	AK049720|Meis1|17268|Meis homeobox 1	BC023689|Meis1|17268|Meis homeobox 1	AK168684|Meis1|17268|Meis homeobox 1	AK134321|Meis1|17268|Meis homeobox 1	AK140748|Meis1|17268|Meis homeobox 1	NM_001193271|Meis1|17268|Meis homeobox 1	NM_010789|Meis1|17268|Meis homeobox 1
mm9_v1_chrX_-_72823345_72823551	5.73345	HOX{A6,A7,B6,B7}.p2	AB232636|Rab39b|67790|RAB39B, member RAS oncogene family	BC052472|Rab39b|67790|RAB39B, member RAS oncogene family	AK039013|Rab39b|67790|RAB39B, member RAS oncogene family	AK048981|Rab39b|67790|RAB39B, member RAS oncogene family	AK160737|Rab39b|67790|RAB39B, member RAS oncogene family	NM_175122|Rab39b|67790|RAB39B, member RAS oncogene family	AK018257|Rab39b|67790|RAB39B, member RAS oncogene family	AK020665|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr7_-_86531912_86531912	5.73203	HOX{A6,A7,B6,B7}.p2	AK140622|Rlbp1|19771|retinaldehyde binding protein 1	NM_001173483|Rlbp1|19771|retinaldehyde binding protein 1	NM_020599|Rlbp1|19771|retinaldehyde binding protein 1
mm9_v1_chr11_-_53293580_53293677	5.73079	HOX{A6,A7,B6,B7}.p2	AK043538|Ankrd43|237761|ankyrin repeat domain 43
mm9_v1_chr17_+_6138147_6138147	5.70696	HOX{A6,A7,B6,B7}.p2	AK173165|Tulp4|68842|tubby like protein 4	NM_054040|Tulp4|68842|tubby like protein 4
mm9_v1_chr16_+_96689322_96689354	5.68396	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_92232506_92232632	5.68126	HOX{A6,A7,B6,B7}.p2	AF109769|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	AF109770|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	AF109771|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1
mm9_v1_chr14_-_73762840_73762848	5.67965	HOX{A6,A7,B6,B7}.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr1_-_20608010_20608144	5.67681	HOX{A6,A7,B6,B7}.p2	AY438374|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK143992|Pkhd1|241035|polycystic kidney and hepatic disease 1	AY130764|Pkhd1|241035|polycystic kidney and hepatic disease 1	NM_153179|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK052698|Pkhd1|241035|polycystic kidney and hepatic disease 1
mm9_v1_chr5_+_75548309_75548318	5.67518	HOX{A6,A7,B6,B7}.p2	NM_011058|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK081664|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide
mm9_v1_chr9_+_45214037_45214172	5.66895	HOX{A6,A7,B6,B7}.p2	AY626243|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	AY626245|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	AK002228|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	NM_007503|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	BC024614|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	AK002215|Fxyd2|11936|FXYD domain-containing ion transport regulator 2
mm9_v1_chr15_-_79664645_79664773	5.66683	HOX{A6,A7,B6,B7}.p2	BC011199|Cbx6|494448|chromobox homolog 6	BC048240|Cbx6|494448|chromobox homolog 6	AK004679|Cbx6|494448|chromobox homolog 6	AK090253|Cbx6|494448|chromobox homolog 6	AK146048|Cbx6|494448|chromobox homolog 6	AK146103|Cbx6|494448|chromobox homolog 6	AY394488|Npcd|504193|neuronal pentraxin chromo domain	AY394489|Npcd|504193|neuronal pentraxin chromo domain	AY395907|Npcd|504193|neuronal pentraxin chromo domain	AK035250|Cbx6|494448|chromobox homolog 6	NM_001013360|Npcd|504193|neuronal pentraxin chromo domain	NM_001013362|Npcd|504193|neuronal pentraxin chromo domain	NM_028763|Cbx6|494448|chromobox homolog 6
mm9_v1_chr11_-_55233581_55233646	5.65851	HOX{A6,A7,B6,B7}.p2	NM_009242|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr19_-_8913619_8913779	5.65258	HOX{A6,A7,B6,B7}.p2	BC029680|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK032646|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK004459|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	NM_010316|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3
mm9_v1_chr14_-_46149660_46149750	5.65074	HOX{A6,A7,B6,B7}.p2	BC033436|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK079588|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK166552|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK145030|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK165608|Fermt2|218952|fermitin family homolog 2 (Drosophila)	NM_146054|Fermt2|218952|fermitin family homolog 2 (Drosophila)
mm9_v1_chr11_-_22185840_22185840	5.643	HOX{A6,A7,B6,B7}.p2	AF424697|Ehbp1|216565|EH domain binding protein 1	NM_153078|Ehbp1|216565|EH domain binding protein 1
mm9_v1_chr5_+_21049296_21049344	5.6386	HOX{A6,A7,B6,B7}.p2	NM_028977|Lrrc17|74511|leucine rich repeat containing 17
mm9_v1_chr12_+_37968225_37968446	5.62853	HOX{A6,A7,B6,B7}.p2	AK040702|Tmem195|319660|transmembrane protein 195	NM_178767|Tmem195|319660|transmembrane protein 195	BC038044|Tmem195|319660|transmembrane protein 195	AK050246|Tmem195|319660|transmembrane protein 195	AK163155|Tmem195|319660|transmembrane protein 195
mm9_v1_chr16_-_85862579_85862641	5.62459	HOX{A6,A7,B6,B7}.p2	AK046558|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)	AK164560|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr6_-_13788580_13788612	5.61967	HOX{A6,A7,B6,B7}.p2	AK047740|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr5_+_29972960_29973052	5.61284	HOX{A6,A7,B6,B7}.p2	AK185151|Ube3c|100763|ubiquitin protein ligase E3C	AK203997|Ube3c|100763|ubiquitin protein ligase E3C	AK049125|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr15_-_101947088_101947134	5.61279	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_+_31754808_31754902	5.6047	HOX{A6,A7,B6,B7}.p2	NM_172993|Zfp512|269639|zinc finger protein 512	AK173267|Zfp512|269639|zinc finger protein 512	AK146353|Zfp512|269639|zinc finger protein 512	AK084205|Zfp512|269639|zinc finger protein 512	AK149921|Zfp512|269639|zinc finger protein 512	AK154918|Zfp512|269639|zinc finger protein 512	BC089160|Zfp512|269639|zinc finger protein 512	BC066136|Zfp512|269639|zinc finger protein 512
mm9_v1_chr4_+_102432943_102433069	5.60075	HOX{A6,A7,B6,B7}.p2	AK032439|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	AK148302|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	BC017596|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_144906|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	AK014022|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chrX_+_45976982_45977308	5.59505	HOX{A6,A7,B6,B7}.p2	NM_001166450|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	BC048692|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155812|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155813|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr10_+_85763303_85763334	5.59004	HOX{A6,A7,B6,B7}.p2	BC014713|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr6_-_92484838_92484854	5.58546	HOX{A6,A7,B6,B7}.p2	AK147576|Prickle2|243548|prickle homolog 2 (Drosophila)	AK147628|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134459|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr10_+_127662893_127662937	5.58072	HOX{A6,A7,B6,B7}.p2	AK053490|Mip|17339|major intrinsic protein of eye lens fiber	AK136287|Mip|17339|major intrinsic protein of eye lens fiber	NM_008600|Mip|17339|major intrinsic protein of eye lens fiber	BC082567|Mip|17339|major intrinsic protein of eye lens fiber	AK053494|Mip|17339|major intrinsic protein of eye lens fiber	U27502|Mip|17339|major intrinsic protein of eye lens fiber
mm9_v1_chr13_-_60278859_60278952	5.57287	HOX{A6,A7,B6,B7}.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr1_+_108068405_108068445	5.56438	HOX{A6,A7,B6,B7}.p2	NM_133821|Phlpp1|98432|PH domain and leucine rich repeat protein phosphatase 1
mm9_v1_chr11_-_96688959_96689060	5.55362	HOX{A6,A7,B6,B7}.p2	BC047283|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AF071084|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	X78709|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr10_+_84218792_84218938	5.54876	HOX{A6,A7,B6,B7}.p2	NM_001024918|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AK034131|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AK090309|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AY102010|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AY342003|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AB086957|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)
mm9_v1_chr16_+_23107828_23107844	5.54061	HOX{A6,A7,B6,B7}.p2	X12507|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK076509|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK132969|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK165898|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK088669|Eif4a2|13682|eukaryotic translation initiation factor 4A2	BC094422|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr11_+_89894863_89894903	5.53914	HOX{A6,A7,B6,B7}.p2	BC034841|Tmem100|67888|transmembrane protein 100
mm9_v1_chr5_-_104543106_104543114	5.53613	HOX{A6,A7,B6,B7}.p2	NM_010097|Sparcl1|13602|SPARC-like 1
mm9_v1_chr18_-_13100228_13100349	5.51585	HOX{A6,A7,B6,B7}.p2	AY536214|Osbpl1a|64291|oxysterol binding protein-like 1A	NM_207530|Osbpl1a|64291|oxysterol binding protein-like 1A	BC031735|Osbpl1a|64291|oxysterol binding protein-like 1A	AK090069|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr14_+_124059330_124059403	5.50695	HOX{A6,A7,B6,B7}.p2	AK051773|Itgbl1|223272|integrin, beta-like 1	NM_145467|Itgbl1|223272|integrin, beta-like 1	BC020152|Itgbl1|223272|integrin, beta-like 1	AK029068|Itgbl1|223272|integrin, beta-like 1
mm9_v1_chr6_-_141804691_141804757	5.47777	HOX{A6,A7,B6,B7}.p2	AB031814|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4	NM_030687|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4
mm9_v1_chr11_+_102465839_102465846	5.4766	HOX{A6,A7,B6,B7}.p2	BC049774|Fzd2|57265|frizzled homolog 2 (Drosophila)
mm9_v1_chr11_-_42134548_42134554	5.47297	HOX{A6,A7,B6,B7}.p2	AK135145|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	AK137331|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	NM_001099641|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	NM_008068|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr2_+_135885126_135885166	5.4563	HOX{A6,A7,B6,B7}.p2	AK014127|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr3_-_117063793_117063793	5.43472	HOX{A6,A7,B6,B7}.p2	AF541279|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK046782|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266266|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266267|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	NM_177664|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr11_+_46049058_46049084	5.42452	HOX{A6,A7,B6,B7}.p2	AK081240|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	NM_177075|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	BC104394|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	BC104395|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene
mm9_v1_chr12_-_73509668_73509745	5.42354	HOX{A6,A7,B6,B7}.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chrX_-_149471740_149472145	5.42221	HOX{A6,A7,B6,B7}.p2	AK008349|Mageh1|75625|melanoma antigen, family H, 1	AF319981|Mageh1|75625|melanoma antigen, family H, 1	BC058380|Mageh1|75625|melanoma antigen, family H, 1	BC051935|Mageh1|75625|melanoma antigen, family H, 1	BC060080|Mageh1|75625|melanoma antigen, family H, 1	AK145866|Mageh1|75625|melanoma antigen, family H, 1	NM_023788|Mageh1|75625|melanoma antigen, family H, 1	AK000896|Mageh1|75625|melanoma antigen, family H, 1
mm9_v1_chr11_-_90252208_90252214	5.40779	HOX{A6,A7,B6,B7}.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr3_-_19595395_19595395	5.40039	HOX{A6,A7,B6,B7}.p2	NM_205769|Crh|12918|corticotropin releasing hormone
mm9_v1_chr11_-_11798035_11798088	5.40013	HOX{A6,A7,B6,B7}.p2	AF012881|Ddc|13195|dopa decarboxylase	BC089594|Ddc|13195|dopa decarboxylase
mm9_v1_chr8_+_120807621_120807654	5.39387	HOX{A6,A7,B6,B7}.p2	AK032409|Cdh13|12554|cadherin 13	AK039438|Cdh13|12554|cadherin 13	AB022100|Cdh13|12554|cadherin 13	BC021628|Cdh13|12554|cadherin 13	AK045201|Cdh13|12554|cadherin 13	AK048724|Cdh13|12554|cadherin 13	NM_019707|Cdh13|12554|cadherin 13
mm9_v1_chr6_-_58857000_58857134	5.37994	HOX{A6,A7,B6,B7}.p2	AB041556|Nap1l5|58243|nucleosome assembly protein 1-like 5	BC046332|Nap1l5|58243|nucleosome assembly protein 1-like 5	NM_021432|Nap1l5|58243|nucleosome assembly protein 1-like 5
mm9_v1_chr2_+_102498798_102498825	5.37876	HOX{A6,A7,B6,B7}.p2	U75372|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr3_+_66789621_66789657	5.37105	HOX{A6,A7,B6,B7}.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr17_+_26793311_26793343	5.36807	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_41836783_41836783	5.36414	HOX{A6,A7,B6,B7}.p2	NM_001085530|Gm13298|545611|predicted gene 13298
mm9_v1_chrX_+_38754658_38754822	5.36132	HOX{A6,A7,B6,B7}.p2	AK161163|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB022342|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129855|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129856|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK220530|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK135043|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB079072|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102775|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102776|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483494|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483495|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK046158|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr5_-_104542598_104542621	5.35931	HOX{A6,A7,B6,B7}.p2	AK158725|Sparcl1|13602|SPARC-like 1
mm9_v1_chr1_+_137904795_137904795	5.35741	HOX{A6,A7,B6,B7}.p2	NM_001160145|Tmem9|66241|transmembrane protein 9
mm9_v1_chr7_-_107805466_107805495	5.33266	HOX{A6,A7,B6,B7}.p2	AF071000|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF100613|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163186|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163187|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr17_+_74154214_74154436	5.33221	HOX{A6,A7,B6,B7}.p2	AK051717|Ehd3|57440|EH-domain containing 3	AF506002|Ehd3|57440|EH-domain containing 3	BC046596|Ehd3|57440|EH-domain containing 3
mm9_v1_chr10_+_96942181_96942256	5.31522	HOX{A6,A7,B6,B7}.p2	X53929|Dcn|13179|decorin	AK135287|Dcn|13179|decorin	AK145905|Dcn|13179|decorin	AK161788|Dcn|13179|decorin	AK165408|Dcn|13179|decorin
mm9_v1_chr5_+_35341726_35341726	5.30778	HOX{A6,A7,B6,B7}.p2	AK014569|Rgs12|71729|regulator of G-protein signaling 12	AK161129|Rgs12|71729|regulator of G-protein signaling 12	NM_001163512|Rgs12|71729|regulator of G-protein signaling 12
mm9_v1_chr2_-_173053287_173053316	5.30777	HOX{A6,A7,B6,B7}.p2	AK077382|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chr14_-_69151731_69151797	5.29155	HOX{A6,A7,B6,B7}.p2	AF013107|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK136692|Adam7|11500|a disintegrin and metallopeptidase domain 7	NM_007402|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK020312|Adam7|11500|a disintegrin and metallopeptidase domain 7
mm9_v1_chr17_-_46817800_46817900	5.26254	HOX{A6,A7,B6,B7}.p2	BC018154|Klhdc3|71765|kelch domain containing 3	AK004964|Klhdc3|71765|kelch domain containing 3	AK141673|Klhdc3|71765|kelch domain containing 3	NM_001163729|Klhdc3|71765|kelch domain containing 3	NM_027910|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr9_-_40153864_40153891	5.25508	HOX{A6,A7,B6,B7}.p2	BC070451|Gramd1b|235283|GRAM domain containing 1B
mm9_v1_chr2_+_162760216_162760271	5.23078	HOX{A6,A7,B6,B7}.p2	BC029312|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr2_-_42509117_42509117	5.21114	HOX{A6,A7,B6,B7}.p2	AF270884|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	NM_053011|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr10_+_105907394_105907408	5.193	HOX{A6,A7,B6,B7}.p2	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr14_-_17407701_17408109	5.17841	HOX{A6,A7,B6,B7}.p2	AK078471|Rarb|218772|retinoic acid receptor, beta	NM_011243|Rarb|218772|retinoic acid receptor, beta	S92180|Rarb|218772|retinoic acid receptor, beta	S56660|Rarb|218772|retinoic acid receptor, beta	AK054178|Rarb|218772|retinoic acid receptor, beta	BC076597|Rarb|218772|retinoic acid receptor, beta	X56573|Rarb|218772|retinoic acid receptor, beta
mm9_v1_chr6_+_141472906_141473070	5.17401	HOX{A6,A7,B6,B7}.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr1_-_137268058_137268336	5.16318	HOX{A6,A7,B6,B7}.p2	AK199485|Shisa4|77552|shisa homolog 4 (Xenopus laevis)	AK212908|Shisa4|77552|shisa homolog 4 (Xenopus laevis)
mm9_v1_chr1_-_180259089_180259120	5.15691	HOX{A6,A7,B6,B7}.p2	AK049600|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr8_-_42140113_42140147	5.15292	HOX{A6,A7,B6,B7}.p2	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr18_+_37839910_37840111	5.15155	HOX{A6,A7,B6,B7}.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr11_+_98626169_98626302	5.13235	HOX{A6,A7,B6,B7}.p2	AK165172|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr2_-_32286633_32286688	5.11889	HOX{A6,A7,B6,B7}.p2	BC066998|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164358|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr8_-_98412220_98412268	5.11249	HOX{A6,A7,B6,B7}.p2	U82470|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	J02622|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	NM_010325|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chrX_+_100551808_100551914	5.11133	HOX{A6,A7,B6,B7}.p2	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr11_-_53293696_53293735	5.10624	HOX{A6,A7,B6,B7}.p2	NM_183173|Ankrd43|237761|ankyrin repeat domain 43
mm9_v1_chr12_+_111805938_111806039	5.10545	HOX{A6,A7,B6,B7}.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr13_+_83803830_83803849	5.04711	HOX{A6,A7,B6,B7}.p2	AK044589|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr15_+_97962651_97962722	5.04082	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_75398460_75398460	5.0349	HOX{A6,A7,B6,B7}.p2	NM_198866|Dbpht2|386753|DNA binding protein with his-thr domain
mm9_v1_chr5_-_134713853_134713859	5.03182	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_-_37748753_37748753	5.01968	HOX{A6,A7,B6,B7}.p2	AK005931|Gcap14|72972|granule cell antiserum positive 14	BC048641|Gcap14|72972|granule cell antiserum positive 14	BC060947|Gcap14|72972|granule cell antiserum positive 14	NM_028407|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr5_-_5694325_5694567	4.99149	HOX{A6,A7,B6,B7}.p2	BC043459|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150881|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150889|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK166162|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK052981|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_028734|Steap2|74051|six transmembrane epithelial antigen of prostate 2
mm9_v1_chr10_+_42550365_42550378	4.98693	HOX{A6,A7,B6,B7}.p2	AK017703|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr1_+_196446049_196446240	4.98443	HOX{A6,A7,B6,B7}.p2	D86949|Plxna2|18845|plexin A2	BC068155|Plxna2|18845|plexin A2
mm9_v1_chr2_-_92232731_92232888	4.9827	HOX{A6,A7,B6,B7}.p2	BC072578|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	AK147033|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	AK053819|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1
mm9_v1_chr11_-_55233366_55233456	4.9818	HOX{A6,A7,B6,B7}.p2	AK049692|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK082283|Sparc|20692|secreted acidic cysteine rich glycoprotein	X04017|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK148670|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK161229|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK089114|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK159249|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr9_+_92502908_92503003	4.96693	HOX{A6,A7,B6,B7}.p2	AK218100|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr1_-_93829376_93829378	4.96429	HOX{A6,A7,B6,B7}.p2	AK170461|Hdac4|208727|histone deacetylase 4
mm9_v1_chr16_-_52268571_52268603	4.96179	HOX{A6,A7,B6,B7}.p2	AK161090|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chrX_-_131543723_131543772	4.95923	HOX{A6,A7,B6,B7}.p2	BC067022|Zmat1|215693|zinc finger, matrin type 1	NM_175446|Zmat1|215693|zinc finger, matrin type 1
mm9_v1_chr4_-_36665923_36665995	4.95217	HOX{A6,A7,B6,B7}.p2	BC090619|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166000|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr13_+_114584715_114584832	4.94207	HOX{A6,A7,B6,B7}.p2	NM_172595|Arl15|218639|ADP-ribosylation factor-like 15	AK039965|Arl15|218639|ADP-ribosylation factor-like 15	AK052164|Arl15|218639|ADP-ribosylation factor-like 15	AK053953|Arl15|218639|ADP-ribosylation factor-like 15	AK050979|Arl15|218639|ADP-ribosylation factor-like 15	BC120664|Arl15|218639|ADP-ribosylation factor-like 15	BC120666|Arl15|218639|ADP-ribosylation factor-like 15	BC144993|Arl15|218639|ADP-ribosylation factor-like 15	AK048736|Arl15|218639|ADP-ribosylation factor-like 15
mm9_v1_chr8_+_12984287_12984308	4.92985	HOX{A6,A7,B6,B7}.p2	AK147252|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr4_-_14548903_14548926	4.91311	HOX{A6,A7,B6,B7}.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr17_-_28502087_28502126	4.89978	HOX{A6,A7,B6,B7}.p2	NM_021478|Tulp1|22157|tubby like protein 1	BC014820|Tulp1|22157|tubby like protein 1	BC029222|Tulp1|22157|tubby like protein 1
mm9_v1_chr11_+_16951911_16951955	4.89765	HOX{A6,A7,B6,B7}.p2	AK019934|Cnrip1|380686|cannabinoid receptor interacting protein 1	BC087946|Cnrip1|380686|cannabinoid receptor interacting protein 1	NM_029861|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr7_+_127821167_127821282	4.89401	HOX{A6,A7,B6,B7}.p2	BC030336|BC030336|233812|cDNA sequence BC030336	AK052350|BC030336|233812|cDNA sequence BC030336
mm9_v1_chrX_+_131291100_131291196	4.89365	HOX{A6,A7,B6,B7}.p2	NM_027870|Armcx3|71703|armadillo repeat containing, X-linked 3	AK030729|Armcx3|71703|armadillo repeat containing, X-linked 3	AK004598|Armcx3|71703|armadillo repeat containing, X-linked 3	BC051113|Armcx3|71703|armadillo repeat containing, X-linked 3	BC108360|Armcx3|71703|armadillo repeat containing, X-linked 3
mm9_v1_chr5_-_134932407_134932628	4.8672	HOX{A6,A7,B6,B7}.p2	BC057091|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC058964|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF247161|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497637|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497638|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497639|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343348|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343351|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497640|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK078488|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343350|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497642|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343349|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497641|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK051310|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF260133|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030287|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030288|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030289|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF257475|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK147196|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC050822|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081462|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081463|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081464|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081466|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081467|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081468|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081469|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081470|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_020331|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1
mm9_v1_chr13_+_43218207_43218244	4.86257	HOX{A6,A7,B6,B7}.p2	NM_001005748|Phactr1|218194|phosphatase and actin regulator 1	AK166463|Phactr1|218194|phosphatase and actin regulator 1	BC025873|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr2_+_118489457_118489505	4.86159	HOX{A6,A7,B6,B7}.p2	BC059912|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr5_+_31167731_31167889	4.85562	HOX{A6,A7,B6,B7}.p2	AK210919|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr3_+_137004089_137004128	4.85216	HOX{A6,A7,B6,B7}.p2	AB034693|Emcn|59308|endomucin	AF060883|Emcn|59308|endomucin	AK164422|Emcn|59308|endomucin
mm9_v1_chr16_+_37887639_37887665	4.84621	HOX{A6,A7,B6,B7}.p2	AK007464|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr9_-_121404750_121404785	4.84382	HOX{A6,A7,B6,B7}.p2	BC028487|Cck|12424|cholecystokinin	AK002677|Cck|12424|cholecystokinin
mm9_v1_chr4_+_54960816_54960816	4.8358	HOX{A6,A7,B6,B7}.p2	NM_172867|Zfp462|242466|zinc finger protein 462
mm9_v1_chr6_+_77192615_77192722	4.82934	HOX{A6,A7,B6,B7}.p2	AK080836|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	NM_028880|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK014545|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK053345|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr9_+_26559146_26559146	4.81842	HOX{A6,A7,B6,B7}.p2	BC034655|B3gat1|76898|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_029792|B3gat1|76898|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
mm9_v1_chr5_-_144266956_144266980	4.81401	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_53693190_53693196	4.81238	HOX{A6,A7,B6,B7}.p2	AK079373|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr1_-_170361525_170361683	4.80888	HOX{A6,A7,B6,B7}.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr10_-_108447674_108447736	4.80663	HOX{A6,A7,B6,B7}.p2	BC042519|Syt1|20979|synaptotagmin I	NM_009306|Syt1|20979|synaptotagmin I
mm9_v1_chr7_+_99968402_99968500	4.8033	HOX{A6,A7,B6,B7}.p2	AK017185|Rab30|75985|RAB30, member RAS oncogene family	AB232626|Rab30|75985|RAB30, member RAS oncogene family	AF399756|Rab30|75985|RAB30, member RAS oncogene family
mm9_v1_chr8_+_123640069_123640092	4.79191	HOX{A6,A7,B6,B7}.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr2_-_165710128_165710217	4.78703	HOX{A6,A7,B6,B7}.p2	AK038961|Zmynd8|228880|zinc finger, MYND-type containing 8	AK155864|Zmynd8|228880|zinc finger, MYND-type containing 8	BC048186|Zmynd8|228880|zinc finger, MYND-type containing 8	NM_027230|Zmynd8|228880|zinc finger, MYND-type containing 8
mm9_v1_chr1_-_166371638_166371729	4.78665	HOX{A6,A7,B6,B7}.p2	AK162938|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chrX_+_50911075_50911243	4.78477	HOX{A6,A7,B6,B7}.p2	NM_028375|Cxx1c|72865|CAAX box 1 homolog C (human)	AK013603|Cxx1c|72865|CAAX box 1 homolog C (human)	BC031701|Cxx1c|72865|CAAX box 1 homolog C (human)
mm9_v1_chr9_-_59797747_59797916	4.76887	HOX{A6,A7,B6,B7}.p2	AF148129|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	BC047150|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	AK053560|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	BC017521|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	BC057958|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	AF204053|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	NM_013708|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3	AK044718|Nr2e3|23958|nuclear receptor subfamily 2, group E, member 3
mm9_v1_chr14_-_71029960_71029960	4.75364	HOX{A6,A7,B6,B7}.p2	BC016897|Epb4.9|13829|erythrocyte protein band 4.9	NM_013514|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr10_-_12897796_12897828	4.7496	HOX{A6,A7,B6,B7}.p2	AK015837|Fam164b|75122|family with sequence similarity 164, member B	BC137685|Fam164b|75122|family with sequence similarity 164, member B	BC144830|Fam164b|75122|family with sequence similarity 164, member B	NM_029172|Fam164b|75122|family with sequence similarity 164, member B
mm9_v1_chr9_-_121404799_121404856	4.74896	HOX{A6,A7,B6,B7}.p2	NM_031161|Cck|12424|cholecystokinin
mm9_v1_chr16_-_88290458_88290613	4.74509	HOX{A6,A7,B6,B7}.p2	AK044420|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK044250|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK043737|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK048634|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK043542|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK133667|Grik1|14805|glutamate receptor, ionotropic, kainate 1	X66118|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK042635|Grik1|14805|glutamate receptor, ionotropic, kainate 1	NM_010348|Grik1|14805|glutamate receptor, ionotropic, kainate 1	NM_146072|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK046122|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK148296|Grik1|14805|glutamate receptor, ionotropic, kainate 1
mm9_v1_chr19_+_27291897_27291921	4.74204	HOX{A6,A7,B6,B7}.p2	U06670|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr17_-_46817717_46817797	4.73314	HOX{A6,A7,B6,B7}.p2	AJ278127|Klhdc3|71765|kelch domain containing 3	AK170623|Klhdc3|71765|kelch domain containing 3	AB053465|Klhdc3|71765|kelch domain containing 3	AK079082|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr18_-_31476527_31476591	4.72409	HOX{A6,A7,B6,B7}.p2	AK046484|Rit2|19762|Ras-like without CAAX 2	AK138206|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr2_-_66512442_66512445	4.71852	HOX{A6,A7,B6,B7}.p2	AK004093|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr2_+_81893814_81893814	4.71681	HOX{A6,A7,B6,B7}.p2	AK049881|Zfp804a|241514|zinc finger protein 804A	NM_175513|Zfp804a|241514|zinc finger protein 804A
mm9_v1_chr17_-_34136726_34136785	4.71664	HOX{A6,A7,B6,B7}.p2	BC011306|H2-K1|14972|histocompatibility 2, K1, K region	J00400|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr2_-_156754104_156754212	4.71096	HOX{A6,A7,B6,B7}.p2	AK183588|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr14_-_71107810_71107841	4.70548	HOX{A6,A7,B6,B7}.p2	AY550930|Xpo7|65246|exportin 7	AK143729|Xpo7|65246|exportin 7
mm9_v1_chr5_+_13399301_13399308	4.70001	HOX{A6,A7,B6,B7}.p2	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr12_+_53955707_53955717	4.69348	HOX{A6,A7,B6,B7}.p2	DQ233646|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr11_+_102465684_102465793	4.69018	HOX{A6,A7,B6,B7}.p2	NM_020510|Fzd2|57265|frizzled homolog 2 (Drosophila)	BC055727|Fzd2|57265|frizzled homolog 2 (Drosophila)	AK048420|Fzd2|57265|frizzled homolog 2 (Drosophila)	AK135363|Fzd2|57265|frizzled homolog 2 (Drosophila)
mm9_v1_chr6_+_30491641_30491643	4.68727	HOX{A6,A7,B6,B7}.p2	NM_001024698|Cpa2|232680|carboxypeptidase A2, pancreatic
mm9_v1_chr5_+_27588462_27588514	4.67147	HOX{A6,A7,B6,B7}.p2	NM_001136060|Dpp6|13483|dipeptidylpeptidase 6	AK031903|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr15_-_102019443_102019495	4.67044	HOX{A6,A7,B6,B7}.p2	AK005015|Csad|246277|cysteine sulfinic acid decarboxylase	NM_144942|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr12_-_77811533_77811533	4.66732	HOX{A6,A7,B6,B7}.p2	AK147299|Spnb1|20741|spectrin beta 1	NM_013675|Spnb1|20741|spectrin beta 1
mm9_v1_chr3_-_127111968_127111977	4.64976	HOX{A6,A7,B6,B7}.p2	AK036018|Ank2|109676|ankyrin 2, brain
mm9_v1_chr11_-_62542594_62542594	4.64362	HOX{A6,A7,B6,B7}.p2	AF281141|Zfp287|170740|zinc finger protein 287	NM_133208|Zfp287|170740|zinc finger protein 287
mm9_v1_chr7_+_140175699_140175731	4.63321	HOX{A6,A7,B6,B7}.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr17_-_34324234_34324335	4.6269	HOX{A6,A7,B6,B7}.p2	CT010227|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	U22447|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	U22448|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	U22919|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	U22920|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	AK008429|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	S58203|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	BC116364|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	D44454|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	D44456|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	D44457|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	D44458|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	D44461|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	NM_013585|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	S59862|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	AK171670|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	BC032210|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	AK152743|Psmb9|16912|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
mm9_v1_chr5_+_115685856_115685859	4.62428	HOX{A6,A7,B6,B7}.p2	BC022670|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)	NM_026398|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm9_v1_chr1_+_169528492_169528646	4.62248	HOX{A6,A7,B6,B7}.p2	NM_009107|Rxrg|20183|retinoid X receptor gamma	BC058401|Rxrg|20183|retinoid X receptor gamma	S62948|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr1_-_175263540_175263633	4.62135	HOX{A6,A7,B6,B7}.p2	AY289754|Darc|13349|Duffy blood group, chemokine receptor	AY291295|Darc|13349|Duffy blood group, chemokine receptor	AF016584|Darc|13349|Duffy blood group, chemokine receptor	BC005583|Darc|13349|Duffy blood group, chemokine receptor	AF109159|Darc|13349|Duffy blood group, chemokine receptor	NM_010045|Darc|13349|Duffy blood group, chemokine receptor
mm9_v1_chr2_+_32483909_32483988	4.61801	HOX{A6,A7,B6,B7}.p2	NM_001198792|Ak1|11636|adenylate kinase 1	AJ010108|Ak1|11636|adenylate kinase 1
mm9_v1_chr16_+_6349108_6349144	4.58384	HOX{A6,A7,B6,B7}.p2	AK134833|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr4_+_57906588_57906598	4.58155	HOX{A6,A7,B6,B7}.p2	AK081365|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr9_-_115152261_115152330	4.58099	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_29642059_29642120	4.57861	HOX{A6,A7,B6,B7}.p2	AK213159|Rtn4|68585|reticulon 4	AK218108|Rtn4|68585|reticulon 4
mm9_v1_chr9_-_21571635_21571709	4.56187	HOX{A6,A7,B6,B7}.p2	AK189211|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr9_+_44287171_44287176	4.56072	HOX{A6,A7,B6,B7}.p2	AK078316|C030014I23Rik|77381|RIKEN cDNA C030014I23 gene
mm9_v1_chr6_-_38238095_38238171	4.54737	HOX{A6,A7,B6,B7}.p2	AK045178|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr1_-_170361985_170362027	4.54476	HOX{A6,A7,B6,B7}.p2	AF020196|Pbx1|18514|pre B-cell leukemia transcription factor 1	BC058390|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr7_-_151621960_151622035	4.53521	HOX{A6,A7,B6,B7}.p2	AK195592|Cttn|13043|cortactin
mm9_v1_chr2_-_42508486_42508592	4.52313	HOX{A6,A7,B6,B7}.p2	BC064765|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	AK080989|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	AK039425|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr14_-_96918064_96918252	4.5056	HOX{A6,A7,B6,B7}.p2	AK031932|Klhl1|93688|kelch-like 1 (Drosophila)	AF252281|Klhl1|93688|kelch-like 1 (Drosophila)	BC094584|Klhl1|93688|kelch-like 1 (Drosophila)	NM_053105|Klhl1|93688|kelch-like 1 (Drosophila)
mm9_v1_chr4_-_42039325_42039326	4.50059	HOX{A6,A7,B6,B7}.p2	NM_001099348|Gm13305|100042555|predicted gene 13305	NM_001100596|Gm2002|100038993|predicted gene 2002	NM_010550|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	U69491|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	X98519|Il11ra2|16158|interleukin 11 receptor, alpha chain 2
mm9_v1_chr6_+_136903029_136903071	4.48395	HOX{A6,A7,B6,B7}.p2	AK080696|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	AK020922|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	NM_023898|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC058192|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC115671|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC115672|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC057290|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm9_v1_chr8_+_84239098_84239098	4.48311	HOX{A6,A7,B6,B7}.p2	BC064813|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II	NM_001024617|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II
mm9_v1_chr12_+_96933566_96933571	4.48309	HOX{A6,A7,B6,B7}.p2	AK140831|Flrt2|399558|fibronectin leucine rich transmembrane protein 2
mm9_v1_chr16_-_56690646_56690662	4.48121	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_126595818_126595818	4.48051	HOX{A6,A7,B6,B7}.p2	NM_010595|Kcna1|16485|potassium voltage-gated channel, shaker-related subfamily, member 1
mm9_v1_chr4_-_102699296_102699446	4.48001	HOX{A6,A7,B6,B7}.p2	AF054843|Insl5|23919|insulin-like 5	BC010968|Insl5|23919|insulin-like 5	AF076971|Insl5|23919|insulin-like 5	AF133817|Insl5|23919|insulin-like 5	NM_011831|Insl5|23919|insulin-like 5	AF054842|Insl5|23919|insulin-like 5
mm9_v1_chr11_-_96678887_96679011	4.47923	HOX{A6,A7,B6,B7}.p2	AK193504|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK201206|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr14_-_80171003_80171120	4.47901	HOX{A6,A7,B6,B7}.p2	AK140407|Pcdh8|18530|protocadherin 8	AF231125|Pcdh8|18530|protocadherin 8	BC052388|Pcdh8|18530|protocadherin 8	BC053008|Pcdh8|18530|protocadherin 8	AK048638|Pcdh8|18530|protocadherin 8	AK049982|Pcdh8|18530|protocadherin 8	NM_001042726|Pcdh8|18530|protocadherin 8	NM_021543|Pcdh8|18530|protocadherin 8
mm9_v1_chr3_+_137004041_137004080	4.47482	HOX{A6,A7,B6,B7}.p2	NM_001163522|Emcn|59308|endomucin	NM_016885|Emcn|59308|endomucin	AK145825|Emcn|59308|endomucin	AK002616|Emcn|59308|endomucin	AK029348|Emcn|59308|endomucin	BC003706|Emcn|59308|endomucin
mm9_v1_chr11_-_31571811_31571918	4.47408	HOX{A6,A7,B6,B7}.p2	NM_001024919|Bod1|69556|biorientation of chromosomes in cell division 1	BC116435|Bod1|69556|biorientation of chromosomes in cell division 1	BC116436|Bod1|69556|biorientation of chromosomes in cell division 1	BC128508|Bod1|69556|biorientation of chromosomes in cell division 1	BC128509|Bod1|69556|biorientation of chromosomes in cell division 1
mm9_v1_chr10_+_126857922_126857922	4.46067	HOX{A6,A7,B6,B7}.p2	AK043545|R3hdm2|71750|R3H domain containing 2	NM_001168293|R3hdm2|71750|R3H domain containing 2	NM_027900|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr9_-_96371668_96371747	4.44779	HOX{A6,A7,B6,B7}.p2	AK208401|Rnf7|19823|ring finger protein 7
mm9_v1_chr14_-_21437545_21437583	4.43883	HOX{A6,A7,B6,B7}.p2	AK047620|Usp54|78787|ubiquitin specific peptidase 54	NM_030180|Usp54|78787|ubiquitin specific peptidase 54
mm9_v1_chrX_+_98877684_98877720	4.43254	HOX{A6,A7,B6,B7}.p2	AK041765|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr1_+_17135421_17135611	4.41802	HOX{A6,A7,B6,B7}.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr2_+_163843744_163843775	4.41294	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_94914273_94914275	4.41294	HOX{A6,A7,B6,B7}.p2	AK165966|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	AK163136|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr2_-_35972131_35972337	4.40994	HOX{A6,A7,B6,B7}.p2	AK220096|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr16_+_5884885_5884885	4.40269	HOX{A6,A7,B6,B7}.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr18_+_37424591_37424651	4.39573	HOX{A6,A7,B6,B7}.p2	BC132112|Pcdhb1|93872|protocadherin beta 1	BC132296|Pcdhb1|93872|protocadherin beta 1	AY013770|Pcdhb1|93872|protocadherin beta 1	NM_053126|Pcdhb1|93872|protocadherin beta 1
mm9_v1_chr11_+_98629709_98629729	4.3925	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_34263272_34263285	4.38783	HOX{A6,A7,B6,B7}.p2	AK158544|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr18_+_37844927_37845053	4.37121	HOX{A6,A7,B6,B7}.p2	BC049814|Pcdhga4|93712|protocadherin gamma subfamily A, 4	AY013798|Pcdhga4|93712|protocadherin gamma subfamily A, 4	NM_033587|Pcdhga4|93712|protocadherin gamma subfamily A, 4
mm9_v1_chr18_+_34932278_34932429	4.3685	HOX{A6,A7,B6,B7}.p2	AK012724|Fam53c|66306|family with sequence similarity 53, member C	AK205811|Fam53c|66306|family with sequence similarity 53, member C
mm9_v1_chr9_+_40076800_40077017	4.35882	HOX{A6,A7,B6,B7}.p2	NM_001083917|Scn3b|235281|sodium channel, voltage-gated, type III, beta	NM_153522|Scn3b|235281|sodium channel, voltage-gated, type III, beta	NM_178227|Scn3b|235281|sodium channel, voltage-gated, type III, beta	BC058636|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK049286|Scn3b|235281|sodium channel, voltage-gated, type III, beta	BC058083|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK051805|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK173115|Scn3b|235281|sodium channel, voltage-gated, type III, beta	AK049747|Scn3b|235281|sodium channel, voltage-gated, type III, beta
mm9_v1_chr2_-_23904343_23904369	4.34671	HOX{A6,A7,B6,B7}.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr2_+_121184334_121184455	4.3345	HOX{A6,A7,B6,B7}.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr15_+_44027680_44027795	4.33437	HOX{A6,A7,B6,B7}.p2	AK134591|Trhr|22045|thyrotropin releasing hormone receptor	NM_013696|Trhr|22045|thyrotropin releasing hormone receptor	M59811|Trhr|22045|thyrotropin releasing hormone receptor	M94384|Trhr|22045|thyrotropin releasing hormone receptor	BC109005|Trhr|22045|thyrotropin releasing hormone receptor	BC109006|Trhr|22045|thyrotropin releasing hormone receptor	BC128269|Trhr|22045|thyrotropin releasing hormone receptor
mm9_v1_chr4_+_44943967_44944033	4.32887	HOX{A6,A7,B6,B7}.p2	AK013088|Zcchc7|319885|zinc finger, CCHC domain containing 7
mm9_v1_chr3_-_103541882_103541927	4.31921	HOX{A6,A7,B6,B7}.p2	AK002518|Olfml3|99543|olfactomedin-like 3	AK131879|Olfml3|99543|olfactomedin-like 3	AK076084|Olfml3|99543|olfactomedin-like 3	AK143728|Olfml3|99543|olfactomedin-like 3	NM_133859|Olfml3|99543|olfactomedin-like 3
mm9_v1_chr10_+_5277477_5277627	4.30166	HOX{A6,A7,B6,B7}.p2	BC054456|Syne1|64009|synaptic nuclear envelope 1	NM_022027|Syne1|64009|synaptic nuclear envelope 1	AK036828|Syne1|64009|synaptic nuclear envelope 1	BC110428|Syne1|64009|synaptic nuclear envelope 1	AF281869|Syne1|64009|synaptic nuclear envelope 1	AK164813|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr1_+_111880313_111880391	4.29934	HOX{A6,A7,B6,B7}.p2	AK034096|Cdh7|241201|cadherin 7, type 2	NM_172853|Cdh7|241201|cadherin 7, type 2	AK137369|Cdh7|241201|cadherin 7, type 2
mm9_v1_chr5_-_44162032_44162072	4.28696	HOX{A6,A7,B6,B7}.p2	BC023291|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr19_-_31839462_31839522	4.28367	HOX{A6,A7,B6,B7}.p2	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr9_-_77195596_77195676	4.2818	HOX{A6,A7,B6,B7}.p2	AK009836|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	BC089626|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	AK081830|2810047F03Rik|72689|RIKEN cDNA 2810047F03 gene	BC131903|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	BC144730|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	NM_027150|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene
mm9_v1_chr19_-_40588193_40588218	4.28013	HOX{A6,A7,B6,B7}.p2	AK122487|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr14_-_76956445_76956583	4.27751	HOX{A6,A7,B6,B7}.p2	AY425619|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	NM_001160326|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	AK012850|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2
mm9_v1_chr2_-_77008655_77008700	4.25225	HOX{A6,A7,B6,B7}.p2	AK045498|Ccdc141|545428|coiled-coil domain containing 141	AK011952|Ccdc141|545428|coiled-coil domain containing 141	AK053175|Ccdc141|545428|coiled-coil domain containing 141	NM_001025576|Ccdc141|545428|coiled-coil domain containing 141	AK041121|Ccdc141|545428|coiled-coil domain containing 141
mm9_v1_chr3_-_97628441_97628543	4.24641	HOX{A6,A7,B6,B7}.p2	AK031066|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_001110163|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr9_+_53109774_53109787	4.2264	HOX{A6,A7,B6,B7}.p2	AB098163|Exph5|320051|exophilin 5	NM_176846|Exph5|320051|exophilin 5	BC120905|Exph5|320051|exophilin 5
mm9_v1_chr9_+_85735986_85736016	4.22016	HOX{A6,A7,B6,B7}.p2	AK165597|Tpbg|21983|trophoblast glycoprotein	NM_011627|Tpbg|21983|trophoblast glycoprotein	AK051162|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr13_+_58909632_58909641	4.20838	HOX{A6,A7,B6,B7}.p2	AK147441|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr5_+_29524545_29524545	4.20506	HOX{A6,A7,B6,B7}.p2	AF190664|Rnf32|56874|ring finger protein 32	NM_021470|Rnf32|56874|ring finger protein 32
mm9_v1_chr1_+_106665395_106665416	4.20216	HOX{A6,A7,B6,B7}.p2	AK034475|Cdh20|23836|cadherin 20	NM_011800|Cdh20|23836|cadherin 20	BC119606|Cdh20|23836|cadherin 20	BC119607|Cdh20|23836|cadherin 20
mm9_v1_chr9_+_45178485_45178507	4.1998	HOX{A6,A7,B6,B7}.p2	BC051127|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK003888|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr5_+_130845319_130845359	4.19806	HOX{A6,A7,B6,B7}.p2	NM_181045|Caln1|140904|calneuron 1	AF282251|Caln1|140904|calneuron 1	AK035865|Caln1|140904|calneuron 1
mm9_v1_chr15_-_103045710_103045798	4.19803	HOX{A6,A7,B6,B7}.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr2_+_110437454_110437527	4.19742	HOX{A6,A7,B6,B7}.p2	AF529222|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_001003915|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_001177624|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK085356|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK128951|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK143967|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK165419|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK085335|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK144004|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	BC141255|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm9_v1_chr11_-_118163704_118163735	4.18998	HOX{A6,A7,B6,B7}.p2	AK217225|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr10_-_24919916_24919967	4.18573	HOX{A6,A7,B6,B7}.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr1_+_34068669_34068669	4.17615	HOX{A6,A7,B6,B7}.p2	AF396878|Dst|13518|dystonin	AF396879|Dst|13518|dystonin	NM_133833|Dst|13518|dystonin	NM_134448|Dst|13518|dystonin	U22452|Dst|13518|dystonin
mm9_v1_chr4_+_42965965_42965965	4.17546	HOX{A6,A7,B6,B7}.p2	BC057087|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5	NM_019874|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5
mm9_v1_chr1_-_65109982_65110015	4.17508	HOX{A6,A7,B6,B7}.p2	K02583|Crygd|12967|crystallin, gamma D	BC057013|Crygd|12967|crystallin, gamma D	AK136286|Crygd|12967|crystallin, gamma D	BC132116|Crygd|12967|crystallin, gamma D	BC132118|Crygd|12967|crystallin, gamma D	NM_007776|Crygd|12967|crystallin, gamma D
mm9_v1_chr18_+_37975071_37975186	4.17372	HOX{A6,A7,B6,B7}.p2	AK139465|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	AY013812|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr7_-_149838254_149838314	4.16994	HOX{A6,A7,B6,B7}.p2	AK146531|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr7_+_97497207_97497237	4.16805	HOX{A6,A7,B6,B7}.p2	BC052915|Sytl2|83671|synaptotagmin-like 2	AB057754|Sytl2|83671|synaptotagmin-like 2	AB057760|Sytl2|83671|synaptotagmin-like 2	AB057761|Sytl2|83671|synaptotagmin-like 2	AB057762|Sytl2|83671|synaptotagmin-like 2	NM_001040085|Sytl2|83671|synaptotagmin-like 2	NM_031394|Sytl2|83671|synaptotagmin-like 2	BC064769|Sytl2|83671|synaptotagmin-like 2	BC138714|Sytl2|83671|synaptotagmin-like 2	BC145398|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr9_+_32031833_32031859	4.15633	HOX{A6,A7,B6,B7}.p2	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr6_+_142246944_142246973	4.13664	HOX{A6,A7,B6,B7}.p2	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr2_+_72018059_72018093	4.13387	HOX{A6,A7,B6,B7}.p2	AK004874|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr7_+_104991480_104991524	4.1321	HOX{A6,A7,B6,B7}.p2	AK077497|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC145698|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr3_-_107877121_107877254	4.12764	HOX{A6,A7,B6,B7}.p2	AK196006|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr11_+_67508827_67508834	4.11976	HOX{A6,A7,B6,B7}.p2	NM_009038|Rcvrn|19674|recoverin	X66196|Rcvrn|19674|recoverin	BC110564|Rcvrn|19674|recoverin
mm9_v1_chr4_+_130225132_130225155	4.11744	HOX{A6,A7,B6,B7}.p2	AK154059|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr12_-_60305853_60305917	4.11394	HOX{A6,A7,B6,B7}.p2	BC006669|Fbxo33|70611|F-box protein 33
mm9_v1_chr2_-_35892046_35892111	4.10778	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_33343965_33344073	4.10625	HOX{A6,A7,B6,B7}.p2	AK049896|Clvs2|215890|clavesin 2	AK049988|Clvs2|215890|clavesin 2
mm9_v1_chr11_-_62206116_62206160	4.10535	HOX{A6,A7,B6,B7}.p2	AK137695|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr4_-_41720928_41721082	4.10451	HOX{A6,A7,B6,B7}.p2	BC099574|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001164045|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001048179|Ccl27a|20301|chemokine (C-C motif) ligand 27A	NM_001164044|Ccl27a|20301|chemokine (C-C motif) ligand 27A
mm9_v1_chr4_+_28740280_28740313	4.10077	HOX{A6,A7,B6,B7}.p2	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chrX_+_91881407_91881417	4.08602	HOX{A6,A7,B6,B7}.p2	NM_008179|Gspt2|14853|G1 to S phase transition 2	AK050859|Gspt2|14853|G1 to S phase transition 2	AK019241|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr7_+_104991443_104991474	4.08568	HOX{A6,A7,B6,B7}.p2	BC055740|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC060157|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	NM_011035|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC079838|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr1_+_135934035_135934119	4.08474	HOX{A6,A7,B6,B7}.p2	AK054183|Fmod|14264|fibromodulin	AK080601|Fmod|14264|fibromodulin	AK082593|Fmod|14264|fibromodulin	BC052673|Fmod|14264|fibromodulin	AK032302|Fmod|14264|fibromodulin	AK053317|Fmod|14264|fibromodulin	NM_021355|Fmod|14264|fibromodulin	BC064779|Fmod|14264|fibromodulin	X94998|Fmod|14264|fibromodulin
mm9_v1_chr7_+_25292375_25292405	4.08169	HOX{A6,A7,B6,B7}.p2	AK139174|Zfp428|232969|zinc finger protein 428
mm9_v1_chr18_+_37089837_37089938	4.08133	HOX{A6,A7,B6,B7}.p2	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chr10_+_40199817_40199881	4.07589	HOX{A6,A7,B6,B7}.p2	AK030146|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr9_+_45178521_45178551	4.07457	HOX{A6,A7,B6,B7}.p2	BC042579|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK042808|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK018354|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AB032010|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr7_+_52955569_52955641	4.06267	HOX{A6,A7,B6,B7}.p2	AB079601|Car11|12348|carbonic anhydrase 11
mm9_v1_chr5_+_13399492_13399661	4.05415	HOX{A6,A7,B6,B7}.p2	AK053115|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	BC057588|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr7_+_120909625_120909653	4.0414	HOX{A6,A7,B6,B7}.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr10_+_20059547_20059574	4.01322	HOX{A6,A7,B6,B7}.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr4_+_57907032_57907040	4.01262	HOX{A6,A7,B6,B7}.p2	AK086796|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr12_+_89961317_89961336	4.0036	HOX{A6,A7,B6,B7}.p2	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr11_+_93905443_93905464	3.98029	HOX{A6,A7,B6,B7}.p2	AK147537|Spag9|70834|sperm associated antigen 9	AK147431|Spag9|70834|sperm associated antigen 9
mm9_v1_chr8_+_116729508_116729539	3.9755	HOX{A6,A7,B6,B7}.p2	BC056927|Vat1l|270097|vesicle amine transport protein 1 homolog-like (T. californica)	AK122527|Vat1l|270097|vesicle amine transport protein 1 homolog-like (T. californica)	NM_173016|Vat1l|270097|vesicle amine transport protein 1 homolog-like (T. californica)
mm9_v1_chr12_+_60196786_60196786	3.96053	HOX{A6,A7,B6,B7}.p2	AF390177|Mia2|338320|melanoma inhibitory activity 2	NM_177321|Mia2|338320|melanoma inhibitory activity 2
mm9_v1_chr1_+_169528838_169528848	3.95354	HOX{A6,A7,B6,B7}.p2	M84819|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr16_-_85056592_85056771	3.94066	HOX{A6,A7,B6,B7}.p2	M24397|App|11820|amyloid beta (A4) precursor protein	AK161854|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr18_+_61123204_61123218	3.93624	HOX{A6,A7,B6,B7}.p2	NM_009792|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X87142|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr1_-_82232392_82232507	3.93595	HOX{A6,A7,B6,B7}.p2	AK141842|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr11_-_55209320_55209338	3.93425	HOX{A6,A7,B6,B7}.p2	AK192259|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr9_-_76893529_76893587	3.92885	HOX{A6,A7,B6,B7}.p2	AF153366|Tinag|26944|tubulointerstitial nephritis antigen	BC010745|Tinag|26944|tubulointerstitial nephritis antigen	AK008374|Tinag|26944|tubulointerstitial nephritis antigen	NM_012033|Tinag|26944|tubulointerstitial nephritis antigen
mm9_v1_chr4_-_140609574_140609606	3.91081	HOX{A6,A7,B6,B7}.p2	AF527975|Crocc|230872|ciliary rootlet coiled-coil, rootletin	NM_172122|Crocc|230872|ciliary rootlet coiled-coil, rootletin
mm9_v1_chr10_-_30375572_30375672	3.9024	HOX{A6,A7,B6,B7}.p2	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr3_-_59066744_59066767	3.89864	HOX{A6,A7,B6,B7}.p2	BC025428|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	AK013804|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	NM_027571|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr7_+_62090614_62090614	3.88989	HOX{A6,A7,B6,B7}.p2	AY164459|Luzp2|233271|leucine zipper protein 2	NM_178705|Luzp2|233271|leucine zipper protein 2
mm9_v1_chr15_-_79359998_79360114	3.88647	HOX{A6,A7,B6,B7}.p2	AK079294|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK011338|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK079442|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK164451|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr12_+_72932132_72932152	3.88318	HOX{A6,A7,B6,B7}.p2	BC047431|Daam1|208846|dishevelled associated activator of morphogenesis 1	AK053785|Daam1|208846|dishevelled associated activator of morphogenesis 1	AY426535|Daam1|208846|dishevelled associated activator of morphogenesis 1
mm9_v1_chr15_+_78860623_78860757	3.88117	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_160292665_160292848	3.8703	HOX{A6,A7,B6,B7}.p2	AK147450|Astn1|11899|astrotactin 1	AK138576|Astn1|11899|astrotactin 1	AK045561|Astn1|11899|astrotactin 1	AK165200|Astn1|11899|astrotactin 1	U48797|Astn1|11899|astrotactin 1	AB093222|Astn1|11899|astrotactin 1
mm9_v1_chr9_+_106366204_106366267	3.86975	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_42300477_42300498	3.86523	HOX{A6,A7,B6,B7}.p2	BC021946|Fgl1|234199|fibrinogen-like protein 1	BC029734|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr19_-_44472087_44472105	3.85948	HOX{A6,A7,B6,B7}.p2	AK078704|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr6_+_129483238_129483284	3.85921	HOX{A6,A7,B6,B7}.p2	BC004602|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr9_-_29219306_29219337	3.84422	HOX{A6,A7,B6,B7}.p2	AF282980|Ntm|235106|neurotrimin	BC023307|Ntm|235106|neurotrimin
mm9_v1_chr17_+_71553920_71554003	3.83454	HOX{A6,A7,B6,B7}.p2	AK165218|Lpin2|64898|lipin 2	AK050018|Lpin2|64898|lipin 2	NM_001164885|Lpin2|64898|lipin 2
mm9_v1_chr8_+_96334879_96334940	3.82975	HOX{A6,A7,B6,B7}.p2	BC051989|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr3_+_146067763_146067821	3.82839	HOX{A6,A7,B6,B7}.p2	AK077112|Ssx2ip|99167|synovial sarcoma, X breakpoint 2 interacting protein
mm9_v1_chr5_-_84846348_84846408	3.82415	HOX{A6,A7,B6,B7}.p2	BC057401|Epha5|13839|Eph receptor A5	AK133698|Epha5|13839|Eph receptor A5	AK034289|Epha5|13839|Eph receptor A5	AK049740|Epha5|13839|Eph receptor A5	NM_007937|Epha5|13839|Eph receptor A5
mm9_v1_chr11_-_106062079_106062107	3.81574	HOX{A6,A7,B6,B7}.p2	AK011721|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr2_+_71892681_71892690	3.80626	HOX{A6,A7,B6,B7}.p2	AB445011|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr14_+_37881214_37881259	3.80417	HOX{A6,A7,B6,B7}.p2	BC037728|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	AK044611|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	AK044383|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	NM_173418|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	BC057628|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
mm9_v1_chrX_-_18038399_18038522	3.80161	HOX{A6,A7,B6,B7}.p2	AK085770|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	BC118515|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	NM_175228|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	AK016298|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	AK163928|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene
mm9_v1_chr12_-_13227172_13227259	3.78287	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_142904128_142904227	3.76538	HOX{A6,A7,B6,B7}.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr6_-_53770687_53770818	3.76489	HOX{A6,A7,B6,B7}.p2	BC043099|Tril|66873|TLR4 interactor with leucine-rich repeats	BC059224|Tril|66873|TLR4 interactor with leucine-rich repeats	NM_025817|Tril|66873|TLR4 interactor with leucine-rich repeats
mm9_v1_chr2_+_69588414_69588564	3.76087	HOX{A6,A7,B6,B7}.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr6_-_25639835_25639849	3.7545	HOX{A6,A7,B6,B7}.p2	BC031918|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr2_+_102498839_102498845	3.74891	HOX{A6,A7,B6,B7}.p2	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr16_-_31314534_31314685	3.74861	HOX{A6,A7,B6,B7}.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr6_-_52859613_52859613	3.7403	HOX{A6,A7,B6,B7}.p2	BC048577|Jazf1|231986|JAZF zinc finger 1	NM_001168277|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr9_-_29219382_29219527	3.72919	HOX{A6,A7,B6,B7}.p2	AK158752|Ntm|235106|neurotrimin
mm9_v1_chr18_-_15222079_15222098	3.72589	HOX{A6,A7,B6,B7}.p2	NM_001142731|Kctd1|106931|potassium channel tetramerisation domain containing 1
mm9_v1_chr5_-_86947601_86947624	3.71712	HOX{A6,A7,B6,B7}.p2	BC118660|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	BC118611|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	AK036981|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	NM_177162|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene
mm9_v1_chr18_+_65210574_65210693	3.71686	HOX{A6,A7,B6,B7}.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr8_-_46467524_46467644	3.71433	HOX{A6,A7,B6,B7}.p2	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr12_-_91976586_91976877	3.71023	HOX{A6,A7,B6,B7}.p2	AK032038|Dio2|13371|deiodinase, iodothyronine, type II	AK045607|Dio2|13371|deiodinase, iodothyronine, type II	AF177196|Dio2|13371|deiodinase, iodothyronine, type II	AF177197|Dio2|13371|deiodinase, iodothyronine, type II	AF093137|Dio2|13371|deiodinase, iodothyronine, type II	BC125383|Dio2|13371|deiodinase, iodothyronine, type II	BC125385|Dio2|13371|deiodinase, iodothyronine, type II	AF096875|Dio2|13371|deiodinase, iodothyronine, type II	NM_010050|Dio2|13371|deiodinase, iodothyronine, type II
mm9_v1_chr7_+_135409196_135409210	3.70096	HOX{A6,A7,B6,B7}.p2	AK128900|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2	AY033886|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2	BC022226|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_133254|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2
mm9_v1_chr8_-_42300504_42300520	3.69843	HOX{A6,A7,B6,B7}.p2	AF478470|Fgl1|234199|fibrinogen-like protein 1	AK083397|Fgl1|234199|fibrinogen-like protein 1	NM_145594|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr2_+_112307393_112307430	3.68537	HOX{A6,A7,B6,B7}.p2	AK045622|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene
mm9_v1_chr15_+_27396405_27396728	3.68529	HOX{A6,A7,B6,B7}.p2	AK083135|Ank|11732|progressive ankylosis	DQ832285|Ank|11732|progressive ankylosis	NM_020332|Ank|11732|progressive ankylosis	BC042644|Ank|11732|progressive ankylosis	BC054379|Ank|11732|progressive ankylosis	AK148070|Ank|11732|progressive ankylosis	AF001532|Ank|11732|progressive ankylosis	AF274752|Ank|11732|progressive ankylosis
mm9_v1_chr2_+_83564553_83564598	3.67323	HOX{A6,A7,B6,B7}.p2	NM_008402|Itgav|16410|integrin alpha V
mm9_v1_chr18_+_61380149_61380152	3.66962	HOX{A6,A7,B6,B7}.p2	X60664|Pde6a|225600|phosphodiesterase 6A, cGMP-specific, rod, alpha	BC031925|Pde6a|225600|phosphodiesterase 6A, cGMP-specific, rod, alpha	BC044892|Pde6a|225600|phosphodiesterase 6A, cGMP-specific, rod, alpha	NM_146086|Pde6a|225600|phosphodiesterase 6A, cGMP-specific, rod, alpha
mm9_v1_chr5_-_74464390_74464465	3.65174	HOX{A6,A7,B6,B7}.p2	BC039916|Usp46|69727|ubiquitin specific peptidase 46	NM_177561|Usp46|69727|ubiquitin specific peptidase 46	AK145298|Usp46|69727|ubiquitin specific peptidase 46
mm9_v1_chr11_+_75570397_75570437	3.64723	HOX{A6,A7,B6,B7}.p2	AK011612|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr3_-_66100663_66100758	3.6468	HOX{A6,A7,B6,B7}.p2	AK164725|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB085187|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_145820|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC075649|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)
mm9_v1_chr4_-_148800321_148800361	3.6372	HOX{A6,A7,B6,B7}.p2	AK083409|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	AK029914|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr5_-_121459496_121459582	3.63697	HOX{A6,A7,B6,B7}.p2	BC042585|Rph3a|19894|rabphilin 3A	NM_011286|Rph3a|19894|rabphilin 3A
mm9_v1_chr16_+_88729106_88729106	3.6133	HOX{A6,A7,B6,B7}.p2	BC027551|Krtap13-1|268905|keratin associated protein 13-1	NM_183189|Krtap13-1|268905|keratin associated protein 13-1
mm9_v1_chr15_+_89164891_89164933	3.61229	HOX{A6,A7,B6,B7}.p2	AK165481|Miox|56727|myo-inositol oxygenase	AK002406|Miox|56727|myo-inositol oxygenase	BC013543|Miox|56727|myo-inositol oxygenase	NM_019977|Miox|56727|myo-inositol oxygenase	AF197127|Miox|56727|myo-inositol oxygenase	AY738257|Miox|56727|myo-inositol oxygenase
mm9_v1_chr3_-_30799013_30799120	3.6014	HOX{A6,A7,B6,B7}.p2	AK050678|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr12_-_73509925_73510040	3.59681	HOX{A6,A7,B6,B7}.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr12_+_3365295_3365555	3.58704	HOX{A6,A7,B6,B7}.p2	AK147572|Kif3c|16570|kinesin family member 3C	BC062648|Kif3c|16570|kinesin family member 3C	AF013116|Kif3c|16570|kinesin family member 3C
mm9_v1_chr6_+_115881925_115881944	3.58212	HOX{A6,A7,B6,B7}.p2	AK044333|Rho|212541|rhodopsin	AK044412|Rho|212541|rhodopsin	BC094460|Rho|212541|rhodopsin	BC031766|Rho|212541|rhodopsin	BC013125|Rho|212541|rhodopsin	NM_145383|Rho|212541|rhodopsin
mm9_v1_chr8_-_107995252_107995266	3.56782	HOX{A6,A7,B6,B7}.p2	BC010788|Tppp3|67971|tubulin polymerization-promoting protein family member 3
mm9_v1_chr11_-_55233339_55233353	3.56701	HOX{A6,A7,B6,B7}.p2	AK003162|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK133377|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK139473|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK146935|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr9_+_40590943_40591093	3.56525	HOX{A6,A7,B6,B7}.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr15_+_8918001_8918118	3.56392	HOX{A6,A7,B6,B7}.p2	AK048152|Ranbp3l|223332|RAN binding protein 3-like	AK132406|Ranbp3l|223332|RAN binding protein 3-like	BC058706|Ranbp3l|223332|RAN binding protein 3-like	NM_198024|Ranbp3l|223332|RAN binding protein 3-like
mm9_v1_chr2_-_79294977_79295122	3.56057	HOX{A6,A7,B6,B7}.p2	U28068|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr7_+_25292201_25292230	3.55826	HOX{A6,A7,B6,B7}.p2	BC096675|Zfp428|232969|zinc finger protein 428	BC024802|Zfp428|232969|zinc finger protein 428	AK010415|Zfp428|232969|zinc finger protein 428
mm9_v1_chr9_-_108363229_108363406	3.55519	HOX{A6,A7,B6,B7}.p2	AK157991|Klhdc8b|78267|kelch domain containing 8B	AK087143|Klhdc8b|78267|kelch domain containing 8B	AK154428|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr6_+_129483206_129483210	3.55389	HOX{A6,A7,B6,B7}.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_-_98904692_98904727	3.54589	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_120314753_120314796	3.54508	HOX{A6,A7,B6,B7}.p2	BC082288|Pde6g|18588|phosphodiesterase 6G, cGMP-specific, rod, gamma	BC014723|Pde6g|18588|phosphodiesterase 6G, cGMP-specific, rod, gamma	AK080735|Pde6g|18588|phosphodiesterase 6G, cGMP-specific, rod, gamma	NM_012065|Pde6g|18588|phosphodiesterase 6G, cGMP-specific, rod, gamma
mm9_v1_chr5_+_14025270_14025485	3.54456	HOX{A6,A7,B6,B7}.p2	AK141295|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_011348|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	Z93947|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	Z93948|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	BC057956|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	AK142340|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	AK159214|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm9_v1_chr18_+_69504145_69504185	3.54183	HOX{A6,A7,B6,B7}.p2	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr19_-_5800268_5800325	3.53315	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_99873795_99873812	3.52589	HOX{A6,A7,B6,B7}.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr2_+_123915670_123915704	3.50719	HOX{A6,A7,B6,B7}.p2	AK122515|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr11_+_100924916_100924968	3.49962	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_109533772_109533792	3.49409	HOX{A6,A7,B6,B7}.p2	AK033127|Bdnf|12064|brain derived neurotrophic factor	AK017559|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr17_+_75578120_75578285	3.47342	HOX{A6,A7,B6,B7}.p2	AK036047|Ltbp1|268977|latent transforming growth factor beta binding protein 1	NM_206958|Ltbp1|268977|latent transforming growth factor beta binding protein 1	AF280604|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr6_-_50250316_50250352	3.47148	HOX{A6,A7,B6,B7}.p2	AK042104|Osbpl3|71720|oxysterol binding protein-like 3
mm9_v1_chr1_+_10983542_10983609	3.4683	HOX{A6,A7,B6,B7}.p2	AK138884|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	AM109952|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	NM_029525|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm9_v1_chr9_-_73781373_73781373	3.4622	HOX{A6,A7,B6,B7}.p2	NM_001081153|Unc13c|208898|unc-13 homolog C (C. elegans)
mm9_v1_chr6_-_145167481_145167570	3.46208	HOX{A6,A7,B6,B7}.p2	BC014700|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC031623|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm9_v1_chr3_+_102538692_102538692	3.46105	HOX{A6,A7,B6,B7}.p2	NM_027533|Tspan2|70747|tetraspanin 2
mm9_v1_chr6_-_101266541_101266557	3.45938	HOX{A6,A7,B6,B7}.p2	AK020657|9530086O07Rik|78741|RIKEN cDNA 9530086O07 gene
mm9_v1_chr11_-_99997241_99997264	3.45652	HOX{A6,A7,B6,B7}.p2	BC057934|Krt15|16665|keratin 15	NM_008469|Krt15|16665|keratin 15
mm9_v1_chr5_-_33590505_33590587	3.45496	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_+_53214934_53215104	3.45227	HOX{A6,A7,B6,B7}.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr2_-_144376513_144376606	3.45138	HOX{A6,A7,B6,B7}.p2	AF039563|Rbbp9|26450|retinoblastoma binding protein 9	BC050201|Rbbp9|26450|retinoblastoma binding protein 9	AK017606|Rbbp9|26450|retinoblastoma binding protein 9	BC011107|Rbbp9|26450|retinoblastoma binding protein 9	BC147814|Rbbp9|26450|retinoblastoma binding protein 9	BC147815|Rbbp9|26450|retinoblastoma binding protein 9	AK076944|Rbbp9|26450|retinoblastoma binding protein 9	NM_015754|Rbbp9|26450|retinoblastoma binding protein 9
mm9_v1_chr13_-_56397521_56397792	3.44489	HOX{A6,A7,B6,B7}.p2	AF352784|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AF352785|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	BC147274|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	BC147275|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AF152377|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	BC079661|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AK014351|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AF144754|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AK155356|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AK076112|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AK004615|Cxcl14|57266|chemokine (C-X-C motif) ligand 14
mm9_v1_chr17_-_27717411_27717581	3.44146	HOX{A6,A7,B6,B7}.p2	AK195385|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	AK205576|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	AK003601|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	AK211644|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm9_v1_chr7_-_16465217_16465303	3.43997	HOX{A6,A7,B6,B7}.p2	BC016502|Crx|12951|cone-rod homeobox containing gene	AK053533|Crx|12951|cone-rod homeobox containing gene	U77615|Crx|12951|cone-rod homeobox containing gene	NM_007770|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr5_-_71233855_71233855	3.43688	HOX{A6,A7,B6,B7}.p2	AK034332|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1	NM_010252|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm9_v1_chr19_-_34952377_34952406	3.43622	HOX{A6,A7,B6,B7}.p2	AF200357|Pank1|75735|pantothenate kinase 1	AK050222|Pank1|75735|pantothenate kinase 1	NM_023792|Pank1|75735|pantothenate kinase 1
mm9_v1_chr18_+_23910833_23910892	3.43057	HOX{A6,A7,B6,B7}.p2	AK158570|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162942|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK168834|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr11_-_68787314_68787359	3.42108	HOX{A6,A7,B6,B7}.p2	BC087921|Rangrf|57785|RAN guanine nucleotide release factor	NM_001101644|Gm4535|100043585|predicted gene 4535	NM_021329|Rangrf|57785|RAN guanine nucleotide release factor	AF243512|Rangrf|57785|RAN guanine nucleotide release factor	BC038470|Rangrf|57785|RAN guanine nucleotide release factor	AK010288|Rangrf|57785|RAN guanine nucleotide release factor
mm9_v1_chr16_-_85030543_85030555	3.40951	HOX{A6,A7,B6,B7}.p2	AK076506|App|11820|amyloid beta (A4) precursor protein	AK200287|App|11820|amyloid beta (A4) precursor protein	AK203089|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_+_174271397_174271531	3.40929	HOX{A6,A7,B6,B7}.p2	BC099932|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AK044640|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AB039879|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	BC141088|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	AF322631|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr6_-_115201846_115201865	3.40664	HOX{A6,A7,B6,B7}.p2	BC064046|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK038820|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK040814|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr5_+_136363810_136363893	3.40491	HOX{A6,A7,B6,B7}.p2	BC018257|Hspb1|15507|heat shock protein 1	AK003119|Hspb1|15507|heat shock protein 1	AK168927|Hspb1|15507|heat shock protein 1	AK010663|Hspb1|15507|heat shock protein 1	X14686|Hspb1|15507|heat shock protein 1	BC090388|Hspb1|15507|heat shock protein 1	BC099463|Hspb1|15507|heat shock protein 1
mm9_v1_chr11_-_90252228_90252237	3.40064	HOX{A6,A7,B6,B7}.p2	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr7_-_108025317_108025394	3.39843	HOX{A6,A7,B6,B7}.p2	AK033211|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr5_-_87174825_87174839	3.39292	HOX{A6,A7,B6,B7}.p2	BC115432|Tmprss11e|243084|transmembrane protease, serine 11e	BC115433|Tmprss11e|243084|transmembrane protease, serine 11e	AK162701|Tmprss11e|243084|transmembrane protease, serine 11e	AK037235|Tmprss11e|243084|transmembrane protease, serine 11e	NM_172880|Tmprss11e|243084|transmembrane protease, serine 11e	AY787860|Tmprss11e|243084|transmembrane protease, serine 11e
mm9_v1_chr1_+_109319264_109319272	3.38847	HOX{A6,A7,B6,B7}.p2	AK014524|Serpinb7|116872|serine (or cysteine) peptidase inhibitor, clade B, member 7	NM_027548|Serpinb7|116872|serine (or cysteine) peptidase inhibitor, clade B, member 7	BC064004|Serpinb7|116872|serine (or cysteine) peptidase inhibitor, clade B, member 7
mm9_v1_chr6_+_71657791_71657963	3.38314	HOX{A6,A7,B6,B7}.p2	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr9_+_47970096_47970197	3.38251	HOX{A6,A7,B6,B7}.p2	AK021362|Fam55d|244853|family with sequence similarity 55, member D	AK048132|Fam55d|244853|family with sequence similarity 55, member D	BC094249|Fam55d|244853|family with sequence similarity 55, member D	NM_172921|Fam55d|244853|family with sequence similarity 55, member D
mm9_v1_chr6_-_124790292_124790292	3.38063	HOX{A6,A7,B6,B7}.p2	BC018239|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3	NM_013530|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3
mm9_v1_chr4_+_98213324_98213424	3.37989	HOX{A6,A7,B6,B7}.p2	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr10_-_94879369_94879430	3.37939	HOX{A6,A7,B6,B7}.p2	AK137403|Socs2|216233|suppressor of cytokine signaling 2	AK144810|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr13_-_74945368_74945386	3.37611	HOX{A6,A7,B6,B7}.p2	AK028843|Cast|12380|calpastatin	NM_009817|Cast|12380|calpastatin	AK028841|Cast|12380|calpastatin
mm9_v1_chr1_-_137064124_137064257	3.37062	HOX{A6,A7,B6,B7}.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr19_+_38207270_38207270	3.36663	HOX{A6,A7,B6,B7}.p2	BC027050|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime	NM_001170959|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime	NM_033614|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime
mm9_v1_chr3_+_51298674_51298675	3.36475	HOX{A6,A7,B6,B7}.p2	AK038231|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chrX_+_98572571_98572682	3.35897	HOX{A6,A7,B6,B7}.p2	BC026833|Gjb1|14618|gap junction protein, beta 1	NM_008124|Gjb1|14618|gap junction protein, beta 1
mm9_v1_chr1_-_24594228_24594275	3.34721	HOX{A6,A7,B6,B7}.p2	BC118970|Col19a1|12823|collagen, type XIX, alpha 1	AB000636|Col19a1|12823|collagen, type XIX, alpha 1	AK149136|Col19a1|12823|collagen, type XIX, alpha 1	NM_007733|Col19a1|12823|collagen, type XIX, alpha 1
mm9_v1_chr18_-_43847367_43847426	3.33944	HOX{A6,A7,B6,B7}.p2	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr7_-_116879475_116879535	3.3348	HOX{A6,A7,B6,B7}.p2	AK194605|Tmem9b|56786|TMEM9 domain family, member B
mm9_v1_chr5_-_101083995_101084232	3.33205	HOX{A6,A7,B6,B7}.p2	AK213124|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK209340|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK211081|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK213346|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr7_-_30290470_30290595	3.32661	HOX{A6,A7,B6,B7}.p2	AK171182|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	AK154121|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	NM_001081028|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3
mm9_v1_chr11_+_104189978_104190032	3.32443	HOX{A6,A7,B6,B7}.p2	AK135147|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr16_-_23890909_23890942	3.3212	HOX{A6,A7,B6,B7}.p2	BC010770|Sst|20604|somatostatin	AK003014|Sst|20604|somatostatin	NM_009215|Sst|20604|somatostatin
mm9_v1_chr13_-_111070225_111070335	3.31976	HOX{A6,A7,B6,B7}.p2	AB232589|Rab3c|67295|RAB3C, member RAS oncogene family	AF312037|Rab3c|67295|RAB3C, member RAS oncogene family	AJ310532|Rab3c|67295|RAB3C, member RAS oncogene family	BC114335|Rab3c|67295|RAB3C, member RAS oncogene family	AY026947|Rab3c|67295|RAB3C, member RAS oncogene family	AK079574|Rab3c|67295|RAB3C, member RAS oncogene family	AK148904|Rab3c|67295|RAB3C, member RAS oncogene family	AK014132|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr6_+_145882641_145882808	3.31852	HOX{A6,A7,B6,B7}.p2	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chr10_+_5151833_5151833	3.31685	HOX{A6,A7,B6,B7}.p2	AK041626|Syne1|64009|synaptic nuclear envelope 1	NM_001079686|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr19_+_43514902_43514932	3.31372	HOX{A6,A7,B6,B7}.p2	NM_031396|Cnnm1|83674|cyclin M1
mm9_v1_chr19_-_40588235_40588251	3.30898	HOX{A6,A7,B6,B7}.p2	U58883|Sorbs1|20411|sorbin and SH3 domain containing 1	AK035212|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr17_+_71554015_71554025	3.29954	HOX{A6,A7,B6,B7}.p2	BC039698|Lpin2|64898|lipin 2
mm9_v1_chr12_-_77811119_77811130	3.2995	HOX{A6,A7,B6,B7}.p2	AK147684|Spnb1|20741|spectrin beta 1	AK147704|Spnb1|20741|spectrin beta 1
mm9_v1_chr19_+_29999624_29999626	3.29047	HOX{A6,A7,B6,B7}.p2	BC003847|Il33|77125|interleukin 33
mm9_v1_chr3_-_72861724_72861729	3.29018	HOX{A6,A7,B6,B7}.p2	AK158856|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chrX_-_69901382_69901584	3.28097	HOX{A6,A7,B6,B7}.p2	BC119317|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	BC120686|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	M86568|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK134760|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK039144|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	NM_008067|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm9_v1_chr9_+_43901941_43901990	3.28089	HOX{A6,A7,B6,B7}.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr14_+_34754224_34754255	3.28043	HOX{A6,A7,B6,B7}.p2	AF156890|Gdf2|12165|growth differentiation factor 2	AK147029|Gdf2|12165|growth differentiation factor 2	NM_019506|Gdf2|12165|growth differentiation factor 2	BC103625|Gdf2|12165|growth differentiation factor 2	BC103679|Gdf2|12165|growth differentiation factor 2	BC103680|Gdf2|12165|growth differentiation factor 2	BC103681|Gdf2|12165|growth differentiation factor 2
mm9_v1_chr16_+_78931190_78931192	3.27756	HOX{A6,A7,B6,B7}.p2	AK031063|Chodl|246048|chondrolectin	AK076523|Chodl|246048|chondrolectin	AK140910|Chodl|246048|chondrolectin	NM_139134|Chodl|246048|chondrolectin
mm9_v1_chr10_+_115455342_115455485	3.26883	HOX{A6,A7,B6,B7}.p2	AK051719|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AK028054|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_011217|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	D31898|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	BC119230|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	BC120547|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr5_-_87919883_87919895	3.26765	HOX{A6,A7,B6,B7}.p2	BC048926|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1	AK140757|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1	NM_053184|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1
mm9_v1_chr10_+_4795808_4795848	3.26475	HOX{A6,A7,B6,B7}.p2	AF535143|Syne1|64009|synaptic nuclear envelope 1	NM_153399|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr18_-_23200150_23200199	3.26282	HOX{A6,A7,B6,B7}.p2	AK006244|Nol4|319211|nucleolar protein 4	AK031008|Nol4|319211|nucleolar protein 4	NM_199024|Nol4|319211|nucleolar protein 4	AK005959|Nol4|319211|nucleolar protein 4
mm9_v1_chr7_-_89079168_89079313	3.26161	HOX{A6,A7,B6,B7}.p2	AK014849|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK044858|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK051401|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK135495|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr11_+_3883638_3883715	3.26136	HOX{A6,A7,B6,B7}.p2	AK007645|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_001177703|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_016922|Gal3st1|53897|galactose-3-O-sulfotransferase 1	BC026806|Gal3st1|53897|galactose-3-O-sulfotransferase 1
mm9_v1_chr10_+_34203204_34203369	3.25879	HOX{A6,A7,B6,B7}.p2	BC007137|Frk|14302|fyn-related kinase	AK166379|Frk|14302|fyn-related kinase	NM_001159544|Frk|14302|fyn-related kinase	NM_010237|Frk|14302|fyn-related kinase	AK028855|Frk|14302|fyn-related kinase	L36132|Frk|14302|fyn-related kinase	AK052614|Frk|14302|fyn-related kinase	AK077264|Frk|14302|fyn-related kinase	Z48757|Frk|14302|fyn-related kinase	AK085191|Frk|14302|fyn-related kinase
mm9_v1_chr6_-_24905939_24906124	3.25501	HOX{A6,A7,B6,B7}.p2	BC147241|Tmem229a|319832|transmembrane protein 229A	BC147242|Tmem229a|319832|transmembrane protein 229A	AK140056|Tmem229a|319832|transmembrane protein 229A	AK087465|Tmem229a|319832|transmembrane protein 229A	NM_177013|Tmem229a|319832|transmembrane protein 229A
mm9_v1_chr2_+_118489312_118489451	3.25494	HOX{A6,A7,B6,B7}.p2	BC079572|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	NM_001033254|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	BC150754|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr12_-_57714253_57714270	3.24967	HOX{A6,A7,B6,B7}.p2	BC150762|Nkx2-9|18094|NK2 transcription factor related, locus 9 (Drosophila)	Y15741|Nkx2-9|18094|NK2 transcription factor related, locus 9 (Drosophila)	NM_008701|Nkx2-9|18094|NK2 transcription factor related, locus 9 (Drosophila)
mm9_v1_chr5_+_7304126_7304163	3.24326	HOX{A6,A7,B6,B7}.p2	BC049718|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK133311|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK014870|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK076678|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	NM_027603|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene
mm9_v1_chr6_+_88674821_88674926	3.24043	HOX{A6,A7,B6,B7}.p2	AJ316580|Mgll|23945|monoglyceride lipase
mm9_v1_chr6_+_129483154_129483185	3.23047	HOX{A6,A7,B6,B7}.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr13_+_40955500_40955723	3.22842	HOX{A6,A7,B6,B7}.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr9_-_110649625_110649648	3.22809	HOX{A6,A7,B6,B7}.p2	BC013446|Pth1r|19228|parathyroid hormone 1 receptor	NM_011199|Pth1r|19228|parathyroid hormone 1 receptor
mm9_v1_chr10_-_33344405_33344571	3.21994	HOX{A6,A7,B6,B7}.p2	AK039308|Clvs2|215890|clavesin 2	NM_175448|Clvs2|215890|clavesin 2	BC058539|Clvs2|215890|clavesin 2	AK163214|Clvs2|215890|clavesin 2	AK053797|Clvs2|215890|clavesin 2	AK139868|Clvs2|215890|clavesin 2	AK139409|Clvs2|215890|clavesin 2	AK169009|Clvs2|215890|clavesin 2
mm9_v1_chr9_-_112088452_112088452	3.21454	HOX{A6,A7,B6,B7}.p2	NM_001177618|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr6_+_55967487_55967494	3.20832	HOX{A6,A7,B6,B7}.p2	AK078335|Gsbs|19051|G substrate	AF500906|Gsbs|19051|G substrate
mm9_v1_chr18_+_37979242_37979328	3.19983	HOX{A6,A7,B6,B7}.p2	BC138677|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464160|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AY013813|Pcdhgc5|93708|protocadherin gamma subfamily C, 5
mm9_v1_chr1_+_160292470_160292548	3.19731	HOX{A6,A7,B6,B7}.p2	AK164117|Astn1|11899|astrotactin 1	NM_007495|Astn1|11899|astrotactin 1	BC094666|Astn1|11899|astrotactin 1
mm9_v1_chr9_-_117160916_117161040	3.19487	HOX{A6,A7,B6,B7}.p2	BC117840|Rbms3|207181|RNA binding motif, single stranded interacting protein	BC117841|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr11_+_87394647_87394667	3.19304	HOX{A6,A7,B6,B7}.p2	AB078010|Sept4|18952|septin 4
mm9_v1_chr8_-_107995282_107995321	3.19249	HOX{A6,A7,B6,B7}.p2	AK009771|Tppp3|67971|tubulin polymerization-promoting protein family member 3	AK012437|Tppp3|67971|tubulin polymerization-promoting protein family member 3	AK155018|Tppp3|67971|tubulin polymerization-promoting protein family member 3	AK160507|Tppp3|67971|tubulin polymerization-promoting protein family member 3	NM_026481|Tppp3|67971|tubulin polymerization-promoting protein family member 3
mm9_v1_chr9_-_80359017_80359087	3.19215	HOX{A6,A7,B6,B7}.p2	AF229929|Impg1|63859|interphotoreceptor matrix proteoglycan 1	BC022970|Impg1|63859|interphotoreceptor matrix proteoglycan 1	AK020862|Impg1|63859|interphotoreceptor matrix proteoglycan 1	NM_022016|Impg1|63859|interphotoreceptor matrix proteoglycan 1	AF266478|Impg1|63859|interphotoreceptor matrix proteoglycan 1
mm9_v1_chr17_+_88840048_88840164	3.18033	HOX{A6,A7,B6,B7}.p2	NM_180974|Foxn2|14236|forkhead box N2	AK154401|Foxn2|14236|forkhead box N2	AK030735|Foxn2|14236|forkhead box N2	AK031639|Foxn2|14236|forkhead box N2	BC138824|Foxn2|14236|forkhead box N2	BC138825|Foxn2|14236|forkhead box N2
mm9_v1_chr3_-_129035406_129035666	3.17713	HOX{A6,A7,B6,B7}.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr18_-_43059156_43059171	3.17084	HOX{A6,A7,B6,B7}.p2	AK079059|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr3_-_88636411_88636470	3.16645	HOX{A6,A7,B6,B7}.p2	AK141588|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK014401|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK033977|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK078122|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene
mm9_v1_chr3_-_116671869_116671896	3.16525	HOX{A6,A7,B6,B7}.p2	NM_023245|Palmd|114301|palmdelphin
mm9_v1_chr17_-_85463965_85464074	3.16145	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_69831951_69832106	3.15786	HOX{A6,A7,B6,B7}.p2	NM_001109752|Dlg4|13385|discs, large homolog 4 (Drosophila)	NM_007864|Dlg4|13385|discs, large homolog 4 (Drosophila)
mm9_v1_chr8_-_55809700_55809720	3.1571	HOX{A6,A7,B6,B7}.p2	AK013889|Wdr17|244484|WD repeat domain 17	AK020995|Wdr17|244484|WD repeat domain 17	AK044241|Wdr17|244484|WD repeat domain 17	NM_001172152|Wdr17|244484|WD repeat domain 17
mm9_v1_chr5_+_108817391_108817466	3.14006	HOX{A6,A7,B6,B7}.p2	NM_008806|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC048247|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC058803|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	AK044364|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	X60133|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	X87952|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	X55968|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC129923|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC129924|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
mm9_v1_chr5_-_123064483_123064536	3.13483	HOX{A6,A7,B6,B7}.p2	BC055721|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK161375|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK013424|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AF354757|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	NM_009879|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	Y10495|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)
mm9_v1_chr17_+_74898763_74898780	3.13152	HOX{A6,A7,B6,B7}.p2	AK086213|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr17_+_74154180_74154211	3.12176	HOX{A6,A7,B6,B7}.p2	AK141265|Ehd3|57440|EH-domain containing 3	NM_020578|Ehd3|57440|EH-domain containing 3	AK128964|Ehd3|57440|EH-domain containing 3	AF155883|Ehd3|57440|EH-domain containing 3
mm9_v1_chr3_-_86352170_86352368	3.11483	HOX{A6,A7,B6,B7}.p2	BC046628|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK053645|Mab21l2|23937|mab-21-like 2 (C. elegans)	NM_011839|Mab21l2|23937|mab-21-like 2 (C. elegans)	BC058730|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK144373|Mab21l2|23937|mab-21-like 2 (C. elegans)
mm9_v1_chr7_+_125856066_125856131	3.1019	HOX{A6,A7,B6,B7}.p2	BC053103|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene	NM_182995|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene	AK141641|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene
mm9_v1_chr11_+_85322997_85323115	3.0981	HOX{A6,A7,B6,B7}.p2	AK192083|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr7_+_25292105_25292148	3.09294	HOX{A6,A7,B6,B7}.p2	NM_146183|Zfp428|232969|zinc finger protein 428	AK080517|Zfp428|232969|zinc finger protein 428
mm9_v1_chr11_+_51085400_51085500	3.09208	HOX{A6,A7,B6,B7}.p2	AF005423|Clk4|12750|CDC like kinase 4	AK161739|Clk4|12750|CDC like kinase 4
mm9_v1_chr13_+_94073701_94073756	3.08907	HOX{A6,A7,B6,B7}.p2	AK137151|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr15_-_98781060_98781163	3.08763	HOX{A6,A7,B6,B7}.p2	M28729|Tuba1a|22142|tubulin, alpha 1A	AK201449|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr18_+_65739883_65739883	3.08596	HOX{A6,A7,B6,B7}.p2	BC067032|Zfp532|328977|zinc finger protein 532	NM_207255|Zfp532|328977|zinc finger protein 532
mm9_v1_chr6_-_52168571_52168571	3.08188	HOX{A6,A7,B6,B7}.p2	NM_010455|Hoxa7|15404|homeobox A7
mm9_v1_chr7_+_104991475_104991479	3.08034	HOX{A6,A7,B6,B7}.p2	AF082077|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr11_+_66725482_66725594	3.07462	HOX{A6,A7,B6,B7}.p2	AK051285|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK041182|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK051645|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	NM_178656|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK084056|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK051158|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	BC147296|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	BC147297|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels
mm9_v1_chr18_+_37921454_37921532	3.07093	HOX{A6,A7,B6,B7}.p2	BC139099|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	BC139100|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	NM_033580|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	AY013810|Pcdhgb8|93705|protocadherin gamma subfamily B, 8
mm9_v1_chr4_-_148500769_148500849	3.05638	HOX{A6,A7,B6,B7}.p2	AF013253|Cort|12854|cortistatin	AK013496|Cort|12854|cortistatin	NM_007745|Cort|12854|cortistatin
mm9_v1_chr3_-_95708543_95708565	3.04211	HOX{A6,A7,B6,B7}.p2	BC046995|Car14|23831|carbonic anhydrase 14	AK157764|Car14|23831|carbonic anhydrase 14	AB005450|Car14|23831|carbonic anhydrase 14	NM_011797|Car14|23831|carbonic anhydrase 14
mm9_v1_chr18_+_37979199_37979219	3.04178	HOX{A6,A7,B6,B7}.p2	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr18_+_38456280_38456312	3.03751	HOX{A6,A7,B6,B7}.p2	NM_001164622|Rnf14|56736|ring finger protein 14	NM_020012|Rnf14|56736|ring finger protein 14
mm9_v1_chr3_-_57496415_57496458	3.03411	HOX{A6,A7,B6,B7}.p2	AK134766|Gm410|242037|predicted gene 410	AK138483|Gm410|242037|predicted gene 410	NM_001033349|Gm410|242037|predicted gene 410
mm9_v1_chr14_-_56143799_56143817	3.02807	HOX{A6,A7,B6,B7}.p2	AK044316|Nrl|18185|neural retina leucine zipper gene	BC031440|Nrl|18185|neural retina leucine zipper gene	NM_001136074|Nrl|18185|neural retina leucine zipper gene	AK044244|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr1_-_97564139_97564174	3.02451	HOX{A6,A7,B6,B7}.p2	BC060112|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AJ223956|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_001159745|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_009183|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	X86000|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr6_-_148719426_148719561	3.02206	HOX{A6,A7,B6,B7}.p2	X67534|Ipo8|320727|importin 8
mm9_v1_chr15_-_72886239_72886241	3.02056	HOX{A6,A7,B6,B7}.p2	AY630620|Trappc9|76510|trafficking protein particle complex 9	BC034590|Trappc9|76510|trafficking protein particle complex 9	NM_029640|Trappc9|76510|trafficking protein particle complex 9
mm9_v1_chr1_-_134638361_134638397	3.01802	HOX{A6,A7,B6,B7}.p2	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr12_+_78576551_78576710	3.0031	HOX{A6,A7,B6,B7}.p2	AK188352|Fut8|53618|fucosyltransferase 8	AK210295|Fut8|53618|fucosyltransferase 8	AK216622|Fut8|53618|fucosyltransferase 8
mm9_v1_chr1_-_42724504_42724516	2.99312	HOX{A6,A7,B6,B7}.p2	BC049671|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr12_-_99816091_99816149	2.99303	HOX{A6,A7,B6,B7}.p2	BC132487|Kcnk10|72258|potassium channel, subfamily K, member 10	BC137869|Kcnk10|72258|potassium channel, subfamily K, member 10	AK082153|Kcnk10|72258|potassium channel, subfamily K, member 10	NM_029911|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr19_-_41151561_41151602	2.99162	HOX{A6,A7,B6,B7}.p2	BC060980|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	AK140031|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	NM_153520|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein
mm9_v1_chr13_-_96214609_96214785	2.99096	HOX{A6,A7,B6,B7}.p2	AK139404|Crhbp|12919|corticotropin releasing hormone binding protein	AK157912|Crhbp|12919|corticotropin releasing hormone binding protein	BC061247|Crhbp|12919|corticotropin releasing hormone binding protein	AK135067|Crhbp|12919|corticotropin releasing hormone binding protein	NM_198408|Crhbp|12919|corticotropin releasing hormone binding protein
mm9_v1_chr14_-_47006944_47006954	2.98876	HOX{A6,A7,B6,B7}.p2	BC052846|Bmp4|12159|bone morphogenetic protein 4
mm9_v1_chr15_+_65703468_65703625	2.98434	HOX{A6,A7,B6,B7}.p2	AK039483|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr2_+_51893618_51893676	2.98252	HOX{A6,A7,B6,B7}.p2	AK139985|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	NM_009398|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	U83903|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	BC021155|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6
mm9_v1_chr9_-_53475610_53475616	2.97903	HOX{A6,A7,B6,B7}.p2	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chrX_+_20427050_20427089	2.97227	HOX{A6,A7,B6,B7}.p2	AB158252|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr4_-_4065927_4065977	2.96804	HOX{A6,A7,B6,B7}.p2	AK047709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK161272|Penk|18619|preproenkephalin	AK135111|Penk|18619|preproenkephalin
mm9_v1_chr11_-_120823366_120823479	2.96167	HOX{A6,A7,B6,B7}.p2	AK178709|Csnk1d|104318|casein kinase 1, delta	AK199847|Csnk1d|104318|casein kinase 1, delta	AK210543|Csnk1d|104318|casein kinase 1, delta
mm9_v1_chrX_+_82293610_82293751	2.95929	HOX{A6,A7,B6,B7}.p2	AK045257|Dmd|13405|dystrophin, muscular dystrophy	AK013510|Dmd|13405|dystrophin, muscular dystrophy	AK075809|Dmd|13405|dystrophin, muscular dystrophy	AK087829|Dmd|13405|dystrophin, muscular dystrophy	AK036936|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chrX_+_104115963_104116162	2.95881	HOX{A6,A7,B6,B7}.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr18_-_32109233_32109289	2.94717	HOX{A6,A7,B6,B7}.p2	BC070439|Gpr17|574402|G protein-coupled receptor 17	NM_001025381|Gpr17|574402|G protein-coupled receptor 17
mm9_v1_chr11_-_95936914_95937007	2.94152	HOX{A6,A7,B6,B7}.p2	BC003854|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008191|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK009883|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_001161419|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011432|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008998|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011054|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK167884|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK010868|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_007506|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
mm9_v1_chr12_-_110099368_110099538	2.94125	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_24258538_24258666	2.9354	HOX{A6,A7,B6,B7}.p2	AK017395|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr9_+_20467843_20467946	2.92249	HOX{A6,A7,B6,B7}.p2	AK185654|Pin1|23988|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm9_v1_chr18_+_37966017_37966102	2.91037	HOX{A6,A7,B6,B7}.p2	AK089310|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC059175|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	NM_033581|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC098457|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr14_-_19071459_19071620	2.90811	HOX{A6,A7,B6,B7}.p2	BC096461|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK079075|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK054522|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	U12142|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	NM_011584|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2
mm9_v1_chr18_+_22503589_22503589	2.9062	HOX{A6,A7,B6,B7}.p2	AK082659|Asxl3|211961|additional sex combs like 3 (Drosophila)	NM_001167777|Asxl3|211961|additional sex combs like 3 (Drosophila)
mm9_v1_chr4_+_135699733_135699741	2.90025	HOX{A6,A7,B6,B7}.p2	BC145871|Id3|15903|inhibitor of DNA binding 3	BC145873|Id3|15903|inhibitor of DNA binding 3	M60523|Id3|15903|inhibitor of DNA binding 3	NM_008321|Id3|15903|inhibitor of DNA binding 3	AK002820|Id3|15903|inhibitor of DNA binding 3	AK031499|Id3|15903|inhibitor of DNA binding 3
mm9_v1_chr9_-_82826139_82826181	2.89998	HOX{A6,A7,B6,B7}.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr2_+_91386476_91386497	2.89787	HOX{A6,A7,B6,B7}.p2	BC017140|Ckap5|75786|cytoskeleton associated protein 5	BC089032|Ckap5|75786|cytoskeleton associated protein 5	NM_001165989|Ckap5|75786|cytoskeleton associated protein 5	NM_029437|Ckap5|75786|cytoskeleton associated protein 5	BC138334|Ckap5|75786|cytoskeleton associated protein 5	BC096422|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr17_-_24211852_24211965	2.88518	HOX{A6,A7,B6,B7}.p2	AK079579|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr11_-_59025711_59025721	2.8826	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_67868723_67868723	2.87679	HOX{A6,A7,B6,B7}.p2	EU163407|Schip1|30953|schwannomin interacting protein 1	EU163408|Schip1|30953|schwannomin interacting protein 1	NM_001113420|Schip1|30953|schwannomin interacting protein 1	NM_001113421|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr5_-_124053691_124053818	2.86815	HOX{A6,A7,B6,B7}.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chrX_+_90900201_90900217	2.86543	HOX{A6,A7,B6,B7}.p2	AK149304|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189950|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	NM_177546|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK053577|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr5_-_116858596_116858671	2.86369	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_92100572_92100639	2.86325	HOX{A6,A7,B6,B7}.p2	AK031100|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	NM_007722|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	AF000236|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	BC015254|Cxcr7|12778|chemokine (C-X-C motif) receptor 7
mm9_v1_chr7_+_119253816_119253899	2.85412	HOX{A6,A7,B6,B7}.p2	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr5_-_134718500_134718616	2.84769	HOX{A6,A7,B6,B7}.p2	AK183312|Gtf2i|14886|general transcription factor II I	AK211276|Gtf2i|14886|general transcription factor II I
mm9_v1_chr2_+_125860507_125860527	2.84352	HOX{A6,A7,B6,B7}.p2	AK086639|Fgf7|14178|fibroblast growth factor 7	BC052847|Fgf7|14178|fibroblast growth factor 7
mm9_v1_chrX_-_147248815_147248863	2.83825	HOX{A6,A7,B6,B7}.p2	AJ277114|Maged2|80884|melanoma antigen, family D, 2	NM_030700|Maged2|80884|melanoma antigen, family D, 2	AK169006|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr1_+_174242554_174242688	2.82827	HOX{A6,A7,B6,B7}.p2	AF439263|Igsf8|140559|immunoglobulin superfamily, member 8	AF411055|Igsf8|140559|immunoglobulin superfamily, member 8	AK213338|Igsf8|140559|immunoglobulin superfamily, member 8
mm9_v1_chr16_-_38433223_38433224	2.81869	HOX{A6,A7,B6,B7}.p2	BC030670|Pla1a|85031|phospholipase A1 member A	AF063498|Pla1a|85031|phospholipase A1 member A	NM_134102|Pla1a|85031|phospholipase A1 member A
mm9_v1_chr6_-_24118065_24118091	2.81673	HOX{A6,A7,B6,B7}.p2	BC040789|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	BC049981|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK019876|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199365|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199366|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK128899|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_019481|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1
mm9_v1_chr13_-_56583606_56583606	2.81585	HOX{A6,A7,B6,B7}.p2	NM_008373|Il9|16198|interleukin 9	X14045|Il9|16198|interleukin 9
mm9_v1_chr4_-_154385090_154385092	2.81437	HOX{A6,A7,B6,B7}.p2	AK044619|Plch2|269615|phospholipase C, eta 2	AK078731|Plch2|269615|phospholipase C, eta 2	DQ176851|Plch2|269615|phospholipase C, eta 2	NM_001113360|Plch2|269615|phospholipase C, eta 2	NM_175556|Plch2|269615|phospholipase C, eta 2
mm9_v1_chr13_+_104899869_104899979	2.81436	HOX{A6,A7,B6,B7}.p2	BC017611|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	NM_144838|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	AK082080|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm9_v1_chr2_-_147011990_147012137	2.81017	HOX{A6,A7,B6,B7}.p2	AK043561|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138159|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138160|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	U31566|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	AK141002|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_001077632|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_010919|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr10_+_56097078_56097350	2.80971	HOX{A6,A7,B6,B7}.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr19_-_40588219_40588234	2.8074	HOX{A6,A7,B6,B7}.p2	AK087553|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_178362|Sorbs1|20411|sorbin and SH3 domain containing 1	BC012703|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr1_+_174271338_174271373	2.80265	HOX{A6,A7,B6,B7}.p2	AK048864|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10	NM_001039484|Kcnj10|16513|potassium inwardly-rectifying channel, subfamily J, member 10
mm9_v1_chr15_-_83263181_83263279	2.80206	HOX{A6,A7,B6,B7}.p2	AK191560|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK198672|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK198717|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK199099|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK199784|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK202155|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK170299|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AF128535|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	AK154785|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	NM_001159510|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2	NM_011862|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2
mm9_v1_chr7_-_89079335_89079355	2.80046	HOX{A6,A7,B6,B7}.p2	AK045542|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	NM_013886|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr13_-_58227306_58227430	2.79451	HOX{A6,A7,B6,B7}.p2	BC048746|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr2_-_165709697_165709718	2.78778	HOX{A6,A7,B6,B7}.p2	AK003657|Zmynd8|228880|zinc finger, MYND-type containing 8
mm9_v1_chr10_+_5057034_5057137	2.7834	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_-_72929166_72929248	2.77752	HOX{A6,A7,B6,B7}.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr15_-_102993757_102993775	2.77563	HOX{A6,A7,B6,B7}.p2	AK045411|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK172510|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK004735|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chrX_-_133277456_133277461	2.76858	HOX{A6,A7,B6,B7}.p2	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr12_+_118754951_118754998	2.76333	HOX{A6,A7,B6,B7}.p2	AK029995|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5	NM_175930|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5	AK030016|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr1_-_97564064_97564129	2.75635	HOX{A6,A7,B6,B7}.p2	AK041723|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK003690|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr4_+_42339258_42339259	2.74966	HOX{A6,A7,B6,B7}.p2	NM_001100596|Gm2002|100038993|predicted gene 2002	NM_010550|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	U69491|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	X98519|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	NM_001099348|Gm13305|100042555|predicted gene 13305
mm9_v1_chr2_-_68310324_68310350	2.74815	HOX{A6,A7,B6,B7}.p2	BC051964|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr14_+_58691522_58691522	2.74617	HOX{A6,A7,B6,B7}.p2	AK158782|Fgf9|14180|fibroblast growth factor 9	NM_013518|Fgf9|14180|fibroblast growth factor 9
mm9_v1_chr19_+_44368557_44368575	2.73962	HOX{A6,A7,B6,B7}.p2	AK083922|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr1_+_74438182_74438368	2.73765	HOX{A6,A7,B6,B7}.p2	NM_153088|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AK089478|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC049184|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC058085|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr18_+_37164856_37165092	2.73164	HOX{A6,A7,B6,B7}.p2	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr2_-_101469142_101469167	2.73145	HOX{A6,A7,B6,B7}.p2	AK020980|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	AK051679|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_026592|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	BC025075|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	AK158171|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene
mm9_v1_chr18_+_24762433_24762495	2.72975	HOX{A6,A7,B6,B7}.p2	AK050960|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK147826|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK168370|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	NM_021448|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK033246|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK034457|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK167725|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK167853|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	BC015284|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	BC051943|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK044699|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AF291064|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)
mm9_v1_chr9_+_44925922_44925963	2.72636	HOX{A6,A7,B6,B7}.p2	NM_001014761|Scn2b|72821|sodium channel, voltage-gated, type II, beta	AB118947|Scn2b|72821|sodium channel, voltage-gated, type II, beta	BC092225|Scn2b|72821|sodium channel, voltage-gated, type II, beta
mm9_v1_chr6_-_56319574_56319627	2.72633	HOX{A6,A7,B6,B7}.p2	AK077123|Pde1c|18575|phosphodiesterase 1C	AK015375|Pde1c|18575|phosphodiesterase 1C	AK014887|Pde1c|18575|phosphodiesterase 1C	AK133243|Pde1c|18575|phosphodiesterase 1C	AK029531|Pde1c|18575|phosphodiesterase 1C	NM_001159955|Pde1c|18575|phosphodiesterase 1C	NM_001159956|Pde1c|18575|phosphodiesterase 1C	NM_001159957|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chr11_-_87800086_87800086	2.72272	HOX{A6,A7,B6,B7}.p2	NM_001168472|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr4_-_44723311_44723311	2.71847	HOX{A6,A7,B6,B7}.p2	M97013|Pax5|18507|paired box gene 5	NM_008782|Pax5|18507|paired box gene 5
mm9_v1_chr2_+_120393393_120393485	2.71634	HOX{A6,A7,B6,B7}.p2	AK019162|Snap23|20619|synaptosomal-associated protein 23	NM_001177792|Snap23|20619|synaptosomal-associated protein 23	NM_001177793|Snap23|20619|synaptosomal-associated protein 23	NM_009222|Snap23|20619|synaptosomal-associated protein 23	AK171763|Snap23|20619|synaptosomal-associated protein 23	AK017311|Snap23|20619|synaptosomal-associated protein 23	BC070456|Snap23|20619|synaptosomal-associated protein 23	AB007444|Snap23|20619|synaptosomal-associated protein 23
mm9_v1_chr15_-_102019373_102019395	2.71153	HOX{A6,A7,B6,B7}.p2	AY033912|Csad|246277|cysteine sulfinic acid decarboxylase	AK186014|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr12_-_11443284_11443537	2.6964	HOX{A6,A7,B6,B7}.p2	BC046226|Vsnl1|26950|visinin-like 1	AK144454|Vsnl1|26950|visinin-like 1	AK160224|Vsnl1|26950|visinin-like 1	AJ489331|Vsnl1|26950|visinin-like 1	NM_012038|Vsnl1|26950|visinin-like 1
mm9_v1_chr1_-_175297778_175297829	2.6894	HOX{A6,A7,B6,B7}.p2	AK036352|Cadm3|94332|cell adhesion molecule 3	AK053077|Cadm3|94332|cell adhesion molecule 3	AK038917|Cadm3|94332|cell adhesion molecule 3	NM_053199|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr11_+_75565381_75565439	2.6838	HOX{A6,A7,B6,B7}.p2	AX775993|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK192964|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK202856|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr3_+_151100845_151100914	2.68377	HOX{A6,A7,B6,B7}.p2	NM_133222|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	AF385682|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	BC017134|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1
mm9_v1_chr11_+_53534295_53534310	2.67378	HOX{A6,A7,B6,B7}.p2	NM_010558|Il5|16191|interleukin 5	X04601|Il5|16191|interleukin 5	X06270|Il5|16191|interleukin 5	BC125366|Il5|16191|interleukin 5	BC132066|Il5|16191|interleukin 5
mm9_v1_chr5_+_136363769_136363791	2.67061	HOX{A6,A7,B6,B7}.p2	NM_013560|Hspb1|15507|heat shock protein 1
mm9_v1_chr2_-_35973217_35973333	2.66489	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_126978704_126978744	2.65341	HOX{A6,A7,B6,B7}.p2	BC043675|Lrp1|16971|low density lipoprotein receptor-related protein 1
mm9_v1_chrX_+_50144260_50144428	2.63999	HOX{A6,A7,B6,B7}.p2	AK134708|Ccdc160|434778|coiled-coil domain containing 160	NM_001034059|Ccdc160|434778|coiled-coil domain containing 160	BC138946|Ccdc160|434778|coiled-coil domain containing 160	BC138947|Ccdc160|434778|coiled-coil domain containing 160
mm9_v1_chr11_-_78510874_78510941	2.62994	HOX{A6,A7,B6,B7}.p2	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr3_-_37623250_37623411	2.62791	HOX{A6,A7,B6,B7}.p2	AK039231|Gm5148|381438|predicted gene 5148	AK039519|Gm5148|381438|predicted gene 5148	AK039710|Gm5148|381438|predicted gene 5148	NM_198657|Gm5148|381438|predicted gene 5148	AK045832|Gm5148|381438|predicted gene 5148
mm9_v1_chr7_-_129235182_129235275	2.61965	HOX{A6,A7,B6,B7}.p2	AK003696|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr9_-_107581922_107581964	2.61933	HOX{A6,A7,B6,B7}.p2	BC022793|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	NM_008140|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	BC051412|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	BC058810|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	AK149254|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1
mm9_v1_chr14_+_55502200_55502231	2.61338	HOX{A6,A7,B6,B7}.p2	AK004680|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr18_-_55149819_55149833	2.61194	HOX{A6,A7,B6,B7}.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr19_+_44368578_44368583	2.61145	HOX{A6,A7,B6,B7}.p2	AK083085|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr3_+_75878452_75878519	2.61035	HOX{A6,A7,B6,B7}.p2	AK140611|Fstl5|213262|follistatin-like 5	AK033652|Fstl5|213262|follistatin-like 5	AK081152|Fstl5|213262|follistatin-like 5	AF374460|Fstl5|213262|follistatin-like 5	BC075640|Fstl5|213262|follistatin-like 5	NM_178673|Fstl5|213262|follistatin-like 5
mm9_v1_chrX_-_91787353_91787369	2.59982	HOX{A6,A7,B6,B7}.p2	AK135452|Maged1|94275|melanoma antigen, family D, 1	AK146867|Maged1|94275|melanoma antigen, family D, 1	AK146908|Maged1|94275|melanoma antigen, family D, 1	AK049660|Maged1|94275|melanoma antigen, family D, 1	AK087937|Maged1|94275|melanoma antigen, family D, 1
mm9_v1_chr2_+_55288297_55288380	2.59951	HOX{A6,A7,B6,B7}.p2	BC068167|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3
mm9_v1_chr18_+_40416615_40416659	2.59608	HOX{A6,A7,B6,B7}.p2	AK013700|2900055J20Rik|73001|RIKEN cDNA 2900055J20 gene
mm9_v1_chr10_+_68996455_68996596	2.59392	HOX{A6,A7,B6,B7}.p2	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr5_+_136363914_136364012	2.5834	HOX{A6,A7,B6,B7}.p2	U03560|Hspb1|15507|heat shock protein 1	U03561|Hspb1|15507|heat shock protein 1	U03562|Hspb1|15507|heat shock protein 1	AF047377|Hspb1|15507|heat shock protein 1
mm9_v1_chr9_+_56266415_56266485	2.58209	HOX{A6,A7,B6,B7}.p2	AK017716|Hmg20a|66867|high mobility group 20A	AK129010|Hmg20a|66867|high mobility group 20A	AK134213|Hmg20a|66867|high mobility group 20A
mm9_v1_chr14_+_84843366_84843370	2.57895	HOX{A6,A7,B6,B7}.p2	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr9_-_53475563_53475590	2.57868	HOX{A6,A7,B6,B7}.p2	BC019661|Cul5|75717|cullin 5	AK046030|Cul5|75717|cullin 5
mm9_v1_chr5_-_24348170_24348237	2.57662	HOX{A6,A7,B6,B7}.p2	AY197373|Rheb|19744|Ras homolog enriched in brain	NM_053075|Rheb|19744|Ras homolog enriched in brain	BC012273|Rheb|19744|Ras homolog enriched in brain	AK151213|Rheb|19744|Ras homolog enriched in brain	AB039919|Rheb|19744|Ras homolog enriched in brain
mm9_v1_chr7_-_110962416_110962439	2.56987	HOX{A6,A7,B6,B7}.p2	BC027434|Hbb-b2|15130|hemoglobin, beta adult minor chain	BC032264|Hbb-b2|15130|hemoglobin, beta adult minor chain	NM_016956|Hbb-b2|15130|hemoglobin, beta adult minor chain	AK168412|Hbb-b1|15129|hemoglobin, beta adult major chain	AK002394|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005496|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011033|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011050|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011052|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011057|Hbb-b1|15129|hemoglobin, beta adult major chain	AK012551|Hbb-b1|15129|hemoglobin, beta adult major chain	AK167615|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168477|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168584|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168819|Hbb-b1|15129|hemoglobin, beta adult major chain	AK028067|Hbb-b1|15129|hemoglobin, beta adult major chain	NM_008220|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr2_+_120967876_120967876	2.56862	HOX{A6,A7,B6,B7}.p2	BC050879|Adal|75894|adenosine deaminase-like	BC052048|Adal|75894|adenosine deaminase-like	NM_029475|Adal|75894|adenosine deaminase-like
mm9_v1_chr11_+_89892027_89892040	2.56358	HOX{A6,A7,B6,B7}.p2	AK003574|Tmem100|67888|transmembrane protein 100	AK033406|Tmem100|67888|transmembrane protein 100
mm9_v1_chr12_-_32017267_32017279	2.56031	HOX{A6,A7,B6,B7}.p2	AK209175|Dld|13382|dihydrolipoamide dehydrogenase
mm9_v1_chr9_-_53475591_53475593	2.55653	HOX{A6,A7,B6,B7}.p2	AK018437|Cul5|75717|cullin 5
mm9_v1_chr2_-_120365581_120365597	2.55311	HOX{A6,A7,B6,B7}.p2	U59739|Zfp106|20402|zinc finger protein 106
mm9_v1_chrX_+_139952975_139953253	2.54913	HOX{A6,A7,B6,B7}.p2	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr5_-_116872852_116872877	2.54854	HOX{A6,A7,B6,B7}.p2	AF273453|Hspb8|80888|heat shock protein 8	BC011219|Hspb8|80888|heat shock protein 8	BC003971|Hspb8|80888|heat shock protein 8	AK005052|Hspb8|80888|heat shock protein 8	NM_030704|Hspb8|80888|heat shock protein 8
mm9_v1_chr9_-_53475519_53475552	2.54575	HOX{A6,A7,B6,B7}.p2	BC075710|Cul5|75717|cullin 5
mm9_v1_chr13_+_89680393_89680435	2.53378	HOX{A6,A7,B6,B7}.p2	BC066853|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr15_+_91668756_91668786	2.52485	HOX{A6,A7,B6,B7}.p2	AY570293|Muc19|239611|mucin 19	EU089957|Muc19|239611|mucin 19	NM_207243|Muc19|239611|mucin 19	AK009287|Smgc|223809|submandibular gland protein C	AK017450|Smgc|223809|submandibular gland protein C	AK132579|Smgc|223809|submandibular gland protein C	AY459348|Smgc|223809|submandibular gland protein C	BC138091|Smgc|223809|submandibular gland protein C	BC145136|Smgc|223809|submandibular gland protein C	NM_198927|Smgc|223809|submandibular gland protein C	HM132022|Muc19|239611|mucin 19	EU089956|Muc19|239611|mucin 19	EU089958|Smgc|223809|submandibular gland protein C	BC055490|Smgc|223809|submandibular gland protein C	EU089959|Muc19|239611|mucin 19
mm9_v1_chr11_+_69832336_69832365	2.51987	HOX{A6,A7,B6,B7}.p2	BC014807|Dlg4|13385|discs, large homolog 4 (Drosophila)	D50621|Dlg4|13385|discs, large homolog 4 (Drosophila)
mm9_v1_chr5_-_134713923_134714158	2.51947	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_91263809_91263809	2.51487	HOX{A6,A7,B6,B7}.p2	AK046913|Zic4|22774|zinc finger protein of the cerebellum 4	NM_009576|Zic4|22774|zinc finger protein of the cerebellum 4
mm9_v1_chr5_+_150480804_150480876	2.51049	HOX{A6,A7,B6,B7}.p2	NM_001081204|B3galtl|381694|beta 1,3-galactosyltransferase-like	AK089440|B3galtl|381694|beta 1,3-galactosyltransferase-like	AK145082|B3galtl|381694|beta 1,3-galactosyltransferase-like	AB253762|B3galtl|381694|beta 1,3-galactosyltransferase-like
mm9_v1_chr8_-_3625510_3625544	2.50666	HOX{A6,A7,B6,B7}.p2	BC014694|Pcp2|18545|Purkinje cell protein 2 (L7)	BC028982|Pcp2|18545|Purkinje cell protein 2 (L7)	BC024853|Pcp2|18545|Purkinje cell protein 2 (L7)	EU164759|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_001129803|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr7_+_121184667_121184743	2.50536	HOX{A6,A7,B6,B7}.p2	AK084717|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr19_+_44368576_44368577	2.50279	HOX{A6,A7,B6,B7}.p2	M26270|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr3_-_116671573_116671671	2.5014	HOX{A6,A7,B6,B7}.p2	AF263246|Palmd|114301|palmdelphin	AL391037|Palmd|114301|palmdelphin	AJ312215|Palmd|114301|palmdelphin	AK171869|Palmd|114301|palmdelphin	BC010193|Palmd|114301|palmdelphin	AK043695|Palmd|114301|palmdelphin	AK014531|Palmd|114301|palmdelphin
mm9_v1_chr16_+_44370127_44370136	2.50029	HOX{A6,A7,B6,B7}.p2	BC024956|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr4_+_102242664_102242699	2.49772	HOX{A6,A7,B6,B7}.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr8_+_97197870_97198051	2.49135	HOX{A6,A7,B6,B7}.p2	AK185594|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK195499|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK205549|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK207967|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK212239|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK214075|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK216087|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK218146|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK220110|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK206178|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK190102|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK205025|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK005851|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr19_+_44368588_44368593	2.49048	HOX{A6,A7,B6,B7}.p2	BC040384|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr3_+_159502646_159502709	2.48479	HOX{A6,A7,B6,B7}.p2	BC075615|Wls|68151|wntless homolog (Drosophila)	NM_026582|Wls|68151|wntless homolog (Drosophila)	AK029053|Wls|68151|wntless homolog (Drosophila)	AK044810|Wls|68151|wntless homolog (Drosophila)	AK019886|Wls|68151|wntless homolog (Drosophila)	AK029104|Wls|68151|wntless homolog (Drosophila)	AK029315|Wls|68151|wntless homolog (Drosophila)	AK031444|Wls|68151|wntless homolog (Drosophila)	AK049842|Wls|68151|wntless homolog (Drosophila)	AK128912|Wls|68151|wntless homolog (Drosophila)	AK159207|Wls|68151|wntless homolog (Drosophila)	AK159977|Wls|68151|wntless homolog (Drosophila)	AK077407|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr17_+_47047407_47047438	2.48161	HOX{A6,A7,B6,B7}.p2	AK136280|Prph2|19133|peripherin 2	AK044549|Prph2|19133|peripherin 2	NM_008938|Prph2|19133|peripherin 2	X14770|Prph2|19133|peripherin 2	BC085266|Prph2|19133|peripherin 2	BC028958|Prph2|19133|peripherin 2
mm9_v1_chr19_-_4793740_4793908	2.47891	HOX{A6,A7,B6,B7}.p2	BC130256|Rbm4|19653|RNA binding motif protein 4	BC144949|Rbm4|19653|RNA binding motif protein 4	BC144950|Rbm4|19653|RNA binding motif protein 4	BC090633|Rbm4|19653|RNA binding motif protein 4	AK182573|Rbm4|19653|RNA binding motif protein 4	U89506|Rbm4|19653|RNA binding motif protein 4	AK049659|Rbm4|19653|RNA binding motif protein 4	AK158962|Rbm4|19653|RNA binding motif protein 4	NM_009032|Rbm4|19653|RNA binding motif protein 4	AK032454|Rbm4|19653|RNA binding motif protein 4
mm9_v1_chr14_+_76354807_76354815	2.4765	HOX{A6,A7,B6,B7}.p2	AK004465|Kctd4|67516|potassium channel tetramerisation domain containing 4	NM_026214|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK008741|Kctd4|67516|potassium channel tetramerisation domain containing 4
mm9_v1_chr2_+_109533719_109533771	2.47236	HOX{A6,A7,B6,B7}.p2	AY057914|Bdnf|12064|brain derived neurotrophic factor	EF125674|Bdnf|12064|brain derived neurotrophic factor	NM_001048142|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr5_+_73398142_73398230	2.46602	HOX{A6,A7,B6,B7}.p2	AK087479|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AK149202|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_173403|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC132529|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC138048|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
mm9_v1_chr6_+_8900018_8900018	2.4658	HOX{A6,A7,B6,B7}.p2	BC145953|Nxph1|18231|neurexophilin 1	BC145955|Nxph1|18231|neurexophilin 1	NM_008751|Nxph1|18231|neurexophilin 1
mm9_v1_chr14_+_19103655_19103798	2.46394	HOX{A6,A7,B6,B7}.p2	NM_023526|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK028539|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK148040|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK010285|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	BC061092|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK167340|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AF225707|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1
mm9_v1_chr5_-_66542161_66542216	2.45018	HOX{A6,A7,B6,B7}.p2	AK035620|Rbm47|245945|RNA binding motif protein 47	AK142584|Rbm47|245945|RNA binding motif protein 47	AK085733|Rbm47|245945|RNA binding motif protein 47	NM_178446|Rbm47|245945|RNA binding motif protein 47	BC112902|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr7_-_110976439_110976454	2.44833	HOX{A6,A7,B6,B7}.p2	AK002258|Hbb-b1|15129|hemoglobin, beta adult major chain	AK003096|Hbb-b1|15129|hemoglobin, beta adult major chain	AK003472|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005442|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010902|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010980|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010981|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010991|Hbb-b1|15129|hemoglobin, beta adult major chain	AK010993|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011006|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011013|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011016|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011027|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011067|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011077|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011083|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011102|Hbb-b1|15129|hemoglobin, beta adult major chain	AK027904|Hbb-b1|15129|hemoglobin, beta adult major chain	AK088149|Hbb-b1|15129|hemoglobin, beta adult major chain	AK133714|Hbb-b1|15129|hemoglobin, beta adult major chain	AK160629|Hbb-b1|15129|hemoglobin, beta adult major chain	AK161021|Hbb-b1|15129|hemoglobin, beta adult major chain	AK165490|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168562|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168826|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168846|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005490|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011069|Hbb-b1|15129|hemoglobin, beta adult major chain	AK027903|Hbb-b1|15129|hemoglobin, beta adult major chain	AK147001|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chrX_+_35954355_35954475	2.44825	HOX{A6,A7,B6,B7}.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr7_-_150085870_150085901	2.44456	HOX{A6,A7,B6,B7}.p2	M69200|Th|21823|tyrosine hydroxylase	NM_009377|Th|21823|tyrosine hydroxylase
mm9_v1_chr5_-_75073816_75073896	2.44053	HOX{A6,A7,B6,B7}.p2	AF034746|Lnx1|16924|ligand of numb-protein X 1	BC139771|Lnx1|16924|ligand of numb-protein X 1	AK044127|Lnx1|16924|ligand of numb-protein X 1	BC040367|Lnx1|16924|ligand of numb-protein X 1	AK161194|Lnx1|16924|ligand of numb-protein X 1	AK138326|Lnx1|16924|ligand of numb-protein X 1	NM_001159578|Lnx1|16924|ligand of numb-protein X 1	NM_001159579|Lnx1|16924|ligand of numb-protein X 1	NM_001159580|Lnx1|16924|ligand of numb-protein X 1	NM_010727|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr11_+_60745534_60745749	2.43284	HOX{A6,A7,B6,B7}.p2	AK008141|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166255|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167442|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK011002|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK053378|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK150067|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166507|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167209|Map2k3|26397|mitogen-activated protein kinase kinase 3	NM_008928|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK159379|Map2k3|26397|mitogen-activated protein kinase kinase 3	BC007467|Map2k3|26397|mitogen-activated protein kinase kinase 3	D87115|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK168710|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK179609|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK181928|Map2k3|26397|mitogen-activated protein kinase kinase 3
mm9_v1_chr14_-_70205184_70205341	2.43228	HOX{A6,A7,B6,B7}.p2	AK081100|Rhobtb2|246710|Rho-related BTB domain containing 2	AK122354|Rhobtb2|246710|Rho-related BTB domain containing 2	BC026836|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr9_-_108363911_108363911	2.43141	HOX{A6,A7,B6,B7}.p2	AK019849|Klhdc8b|78267|kelch domain containing 8B	NM_030075|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr7_-_110976499_110976501	2.42751	HOX{A6,A7,B6,B7}.p2	S71555|Hbb-b1|15129|hemoglobin, beta adult major chain	S71558|Hbb-b1|15129|hemoglobin, beta adult major chain	S71559|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr1_+_166237784_166237874	2.42602	HOX{A6,A7,B6,B7}.p2	AK144915|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_138314|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_178071|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK043515|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK085222|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK164652|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK044962|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC038021|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC049225|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr11_+_98209978_98210141	2.42313	HOX{A6,A7,B6,B7}.p2	BC026568|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_144828|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC011122|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B
mm9_v1_chr7_-_110976438_110976438	2.41787	HOX{A6,A7,B6,B7}.p2	M10524|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr11_+_79498993_79499001	2.41765	HOX{A6,A7,B6,B7}.p2	AK122559|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)
mm9_v1_chr13_-_101500877_101500928	2.41396	HOX{A6,A7,B6,B7}.p2	X74145|Cdk7|12572|cyclin-dependent kinase 7	BC068160|Cdk7|12572|cyclin-dependent kinase 7	AK039084|Cdk7|12572|cyclin-dependent kinase 7	AK168286|Cdk7|12572|cyclin-dependent kinase 7	NM_009874|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr7_-_133848235_133848282	2.41389	HOX{A6,A7,B6,B7}.p2	BC053398|Coro1a|12721|coronin, actin binding protein 1A	BC002136|Coro1a|12721|coronin, actin binding protein 1A	AK075799|Coro1a|12721|coronin, actin binding protein 1A	AK146290|Coro1a|12721|coronin, actin binding protein 1A	AK155860|Coro1a|12721|coronin, actin binding protein 1A	AK172447|Coro1a|12721|coronin, actin binding protein 1A	AF495468|Coro1a|12721|coronin, actin binding protein 1A	NM_009898|Coro1a|12721|coronin, actin binding protein 1A	AK040885|Coro1a|12721|coronin, actin binding protein 1A	AK150962|Coro1a|12721|coronin, actin binding protein 1A	AK151755|Coro1a|12721|coronin, actin binding protein 1A	AK165296|Coro1a|12721|coronin, actin binding protein 1A	AK155527|Coro1a|12721|coronin, actin binding protein 1A
mm9_v1_chr2_+_158436493_158436936	2.41072	HOX{A6,A7,B6,B7}.p2	AY578289|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	NM_009508|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	BC052020|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163754|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK140468|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163661|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AJ001598|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1
mm9_v1_chr8_+_59934719_59934875	2.40425	HOX{A6,A7,B6,B7}.p2	AJ223206|Scrg1|20284|scrapie responsive gene 1	NM_009136|Scrg1|20284|scrapie responsive gene 1	BC058532|Scrg1|20284|scrapie responsive gene 1	AK046213|Scrg1|20284|scrapie responsive gene 1
mm9_v1_chr15_+_58770843_58770951	2.40054	HOX{A6,A7,B6,B7}.p2	AJ300739|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm9_v1_chr7_+_59134514_59134648	2.39314	HOX{A6,A7,B6,B7}.p2	NM_008087|Gas2|14453|growth arrest specific 2	M21828|Gas2|14453|growth arrest specific 2
mm9_v1_chr7_+_148817700_148817712	2.39145	HOX{A6,A7,B6,B7}.p2	BC049878|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr12_+_81619976_81620155	2.38823	HOX{A6,A7,B6,B7}.p2	NM_001081421|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB045325|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK138883|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB175683|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
mm9_v1_chr2_+_35547418_35547513	2.38735	HOX{A6,A7,B6,B7}.p2	AY305657|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001001602|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr13_-_34222209_34222227	2.38616	HOX{A6,A7,B6,B7}.p2	BC138935|Tubb2b|73710|tubulin, beta 2B	BC138936|Tubb2b|73710|tubulin, beta 2B	AK168908|Tubb2b|73710|tubulin, beta 2B	AK010786|Tubb2b|73710|tubulin, beta 2B	NM_023716|Tubb2b|73710|tubulin, beta 2B
mm9_v1_chr1_-_176851918_176851937	2.38192	HOX{A6,A7,B6,B7}.p2	AK161827|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	BC079905|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr7_-_116637251_116637251	2.37851	HOX{A6,A7,B6,B7}.p2	AK147559|Trim66|330627|tripartite motif-containing 66	NM_001170913|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr1_-_55283189_55283376	2.37068	HOX{A6,A7,B6,B7}.p2	BC026871|Rftn2|74013|raftlin family member 2	AK014318|Rftn2|74013|raftlin family member 2
mm9_v1_chr18_+_37644674_37644812	2.3697	HOX{A6,A7,B6,B7}.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr15_+_81641832_81641859	2.36713	HOX{A6,A7,B6,B7}.p2	NM_017376|Tef|21685|thyrotroph embryonic factor	AY540631|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr14_+_112074336_112074336	2.36231	HOX{A6,A7,B6,B7}.p2	NM_198865|Slitrk5|75409|SLIT and NTRK-like family, member 5
mm9_v1_chr15_+_28133520_28133520	2.36209	HOX{A6,A7,B6,B7}.p2	AF466704|Dnahc5|110082|dynein, axonemal, heavy chain 5	AK054152|Dnahc5|110082|dynein, axonemal, heavy chain 5	NM_133365|Dnahc5|110082|dynein, axonemal, heavy chain 5
mm9_v1_chr7_+_100228374_100228439	2.36168	HOX{A6,A7,B6,B7}.p2	AK043957|Fam181b|58238|family with sequence similarity 181, member B	NM_021427|Fam181b|58238|family with sequence similarity 181, member B	AB041569|Fam181b|58238|family with sequence similarity 181, member B	AK140685|Fam181b|58238|family with sequence similarity 181, member B	BC043329|Fam181b|58238|family with sequence similarity 181, member B
mm9_v1_chr1_+_74438139_74438172	2.35902	HOX{A6,A7,B6,B7}.p2	AY028804|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr17_+_93598761_93598761	2.3582	HOX{A6,A7,B6,B7}.p2	BC057344|Adcyap1|11516|adenylate cyclase activating polypeptide 1	NM_009625|Adcyap1|11516|adenylate cyclase activating polypeptide 1
mm9_v1_chr13_+_9171776_9171813	2.35765	HOX{A6,A7,B6,B7}.p2	AK148903|Larp4b|217980|La ribonucleoprotein domain family, member 4B
mm9_v1_chr8_+_129823507_129823551	2.35704	HOX{A6,A7,B6,B7}.p2	AY856081|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	AY856082|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013581|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013580|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)
mm9_v1_chr10_-_94879435_94879509	2.35684	HOX{A6,A7,B6,B7}.p2	AK160537|Socs2|216233|suppressor of cytokine signaling 2	AK162591|Socs2|216233|suppressor of cytokine signaling 2	BC106153|Socs2|216233|suppressor of cytokine signaling 2	NM_007706|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr3_+_95965892_95965939	2.35678	HOX{A6,A7,B6,B7}.p2	NM_181409|Mtmr11|194126|myotubularin related protein 11	AK132375|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr17_-_84587278_84587289	2.35354	HOX{A6,A7,B6,B7}.p2	AK159513|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2	AK160955|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2	AK170763|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2	NM_001001806|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2
mm9_v1_chr3_-_115832327_115832378	2.35052	HOX{A6,A7,B6,B7}.p2	U12884|Vcam1|22329|vascular cell adhesion molecule 1	M84487|Vcam1|22329|vascular cell adhesion molecule 1	L08431|Vcam1|22329|vascular cell adhesion molecule 1	BC011159|Vcam1|22329|vascular cell adhesion molecule 1	AK016465|Vcam1|22329|vascular cell adhesion molecule 1	AK030195|Vcam1|22329|vascular cell adhesion molecule 1	AK143401|Vcam1|22329|vascular cell adhesion molecule 1	AK162954|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr8_-_35153699_35153753	2.34916	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_55027608_55027621	2.3488	HOX{A6,A7,B6,B7}.p2	AK191772|Gars|353172|glycyl-tRNA synthetase
mm9_v1_chr8_+_23868194_23868239	2.34638	HOX{A6,A7,B6,B7}.p2	AK053476|Plat|18791|plasminogen activator, tissue	NM_008872|Plat|18791|plasminogen activator, tissue	BC011256|Plat|18791|plasminogen activator, tissue	AK135857|Plat|18791|plasminogen activator, tissue	AK135965|Plat|18791|plasminogen activator, tissue	AK141665|Plat|18791|plasminogen activator, tissue	AK159620|Plat|18791|plasminogen activator, tissue	AK166639|Plat|18791|plasminogen activator, tissue	BC061508|Plat|18791|plasminogen activator, tissue	BC057967|Plat|18791|plasminogen activator, tissue	J03520|Plat|18791|plasminogen activator, tissue
mm9_v1_chr16_-_91011339_91011552	2.34622	HOX{A6,A7,B6,B7}.p2	NM_001045515|Synj1|104015|synaptojanin 1	NM_001164483|Synj1|104015|synaptojanin 1
mm9_v1_chr3_-_116671720_116671775	2.33606	HOX{A6,A7,B6,B7}.p2	AK136939|Palmd|114301|palmdelphin
mm9_v1_chr19_-_40476799_40476801	2.33306	HOX{A6,A7,B6,B7}.p2	NM_001034964|Sorbs1|20411|sorbin and SH3 domain containing 1	AK146712|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr2_-_165980462_165980784	2.32891	HOX{A6,A7,B6,B7}.p2	AK129316|Sulf2|72043|sulfatase 2
mm9_v1_chr7_+_52965052_52965376	2.32842	HOX{A6,A7,B6,B7}.p2	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr10_-_90579986_90580013	2.32754	HOX{A6,A7,B6,B7}.p2	AK198800|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK190863|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK184040|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK191542|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK191799|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK194450|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK194768|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK200191|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK200546|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK200877|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK202780|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK203032|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK203930|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK213202|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK215444|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK193469|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK196032|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr3_+_30645214_30645214	2.32382	HOX{A6,A7,B6,B7}.p2	AK044227|Samd7|75953|sterile alpha motif domain containing 7	NM_029489|Samd7|75953|sterile alpha motif domain containing 7
mm9_v1_chr10_+_84849558_84849599	2.32249	HOX{A6,A7,B6,B7}.p2	BC096535|Btbd11|74007|BTB (POZ) domain containing 11	NM_028709|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr1_+_137647796_137647915	2.3212	HOX{A6,A7,B6,B7}.p2	AK216299|Csrp1|13007|cysteine and glycine-rich protein 1	AK178295|Csrp1|13007|cysteine and glycine-rich protein 1	AK188439|Csrp1|13007|cysteine and glycine-rich protein 1	AK217070|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr2_+_163519756_163519774	2.32066	HOX{A6,A7,B6,B7}.p2	NM_011106|Pkig|18769|protein kinase inhibitor, gamma	U97170|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr7_-_125832234_125832286	2.31943	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_98412271_98412300	2.31753	HOX{A6,A7,B6,B7}.p2	AK098166|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK167767|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	BC089015|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK155075|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149886|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149926|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK136556|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK152921|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr7_-_20218888_20218906	2.31345	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_29821079_29821243	2.31214	HOX{A6,A7,B6,B7}.p2	NM_001076554|Spna2|20740|spectrin alpha 2	NM_001177667|Spna2|20740|spectrin alpha 2	NM_001177668|Spna2|20740|spectrin alpha 2	AK037683|Spna2|20740|spectrin alpha 2	AK132224|Spna2|20740|spectrin alpha 2	AK147317|Spna2|20740|spectrin alpha 2	AK085063|Spna2|20740|spectrin alpha 2	AK141149|Spna2|20740|spectrin alpha 2	BC049351|Spna2|20740|spectrin alpha 2	BC150941|Spna2|20740|spectrin alpha 2	BC158015|Spna2|20740|spectrin alpha 2	BC172095|Spna2|20740|spectrin alpha 2
mm9_v1_chr11_-_120668581_120668636	2.31107	HOX{A6,A7,B6,B7}.p2	AK078721|Fasn|14104|fatty acid synthase
mm9_v1_chr18_+_35020859_35020865	2.3084	HOX{A6,A7,B6,B7}.p2	M38174|Egr1|13653|early growth response 1	AK037837|Egr1|13653|early growth response 1	AK040925|Egr1|13653|early growth response 1	AK146322|Egr1|13653|early growth response 1	NM_007913|Egr1|13653|early growth response 1	AK145198|Egr1|13653|early growth response 1
mm9_v1_chr15_-_84686558_84686558	2.30737	HOX{A6,A7,B6,B7}.p2	AK046530|Phf21b|271305|PHD finger protein 21B	NM_001081166|Phf21b|271305|PHD finger protein 21B
mm9_v1_chr8_+_109555200_109555247	2.30279	HOX{A6,A7,B6,B7}.p2	AK159117|Vps4a|116733|vacuolar protein sorting 4a (yeast)	AK047821|Vps4a|116733|vacuolar protein sorting 4a (yeast)	BC018368|Vps4a|116733|vacuolar protein sorting 4a (yeast)	NM_126165|Vps4a|116733|vacuolar protein sorting 4a (yeast)	AK169949|Vps4a|116733|vacuolar protein sorting 4a (yeast)
mm9_v1_chr15_-_98762108_98762276	2.30069	HOX{A6,A7,B6,B7}.p2	AK203041|Tuba1b|22143|tubulin, alpha 1B	AK199828|Tuba1b|22143|tubulin, alpha 1B	AK194222|Tuba1b|22143|tubulin, alpha 1B	AK194839|Tuba1b|22143|tubulin, alpha 1B	AK194180|Tuba1b|22143|tubulin, alpha 1B	AK200029|Tuba1b|22143|tubulin, alpha 1B	AK197610|Tuba1b|22143|tubulin, alpha 1B	AK200084|Tuba1b|22143|tubulin, alpha 1B
mm9_v1_chr2_+_58607580_58607600	2.28844	HOX{A6,A7,B6,B7}.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr6_+_124948454_124948454	2.28824	HOX{A6,A7,B6,B7}.p2	BC065170|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_001145927|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr11_-_99184254_99184266	2.28153	HOX{A6,A7,B6,B7}.p2	BC018391|Krt25|70810|keratin 25	NM_133730|Krt25|70810|keratin 25	AK014538|Krt25|70810|keratin 25
mm9_v1_chr4_+_107640938_107641047	2.28122	HOX{A6,A7,B6,B7}.p2	BC030400|Slc1a7|242607|solute carrier family 1 (glutamate transporter), member 7	NM_146255|Slc1a7|242607|solute carrier family 1 (glutamate transporter), member 7	AK044671|Slc1a7|242607|solute carrier family 1 (glutamate transporter), member 7	AK044586|Slc1a7|242607|solute carrier family 1 (glutamate transporter), member 7
mm9_v1_chr4_+_129497720_129497746	2.27842	HOX{A6,A7,B6,B7}.p2	NM_008974|Ptp4a2|19244|protein tyrosine phosphatase 4a2
mm9_v1_chr18_+_37501355_37501397	2.27837	HOX{A6,A7,B6,B7}.p2	AK034205|Pcdhb7|93878|protocadherin beta 7	NM_053132|Pcdhb7|93878|protocadherin beta 7	AK046463|Pcdhb7|93878|protocadherin beta 7	AK029340|Pcdhb7|93878|protocadherin beta 7	BC094897|Pcdhb7|93878|protocadherin beta 7	AK043979|Pcdhb7|93878|protocadherin beta 7
mm9_v1_chr7_-_20282950_20283001	2.27798	HOX{A6,A7,B6,B7}.p2	M73490|Apoe|11816|apolipoprotein E
mm9_v1_chr4_+_13711928_13711928	2.27677	HOX{A6,A7,B6,B7}.p2	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr10_+_98725858_98725868	2.27243	HOX{A6,A7,B6,B7}.p2	AK088665|Dusp6|67603|dual specificity phosphatase 6	AK005062|Dusp6|67603|dual specificity phosphatase 6	AK088468|Dusp6|67603|dual specificity phosphatase 6	AK148192|Dusp6|67603|dual specificity phosphatase 6	AK159502|Dusp6|67603|dual specificity phosphatase 6	NM_026268|Dusp6|67603|dual specificity phosphatase 6	AK151126|Dusp6|67603|dual specificity phosphatase 6	AK152773|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr2_-_91023974_91024055	2.26802	HOX{A6,A7,B6,B7}.p2	AY263980|Madd|228355|MAP-kinase activating death domain	AY263981|Madd|228355|MAP-kinase activating death domain	AY263982|Madd|228355|MAP-kinase activating death domain	AY263983|Madd|228355|MAP-kinase activating death domain	AY263984|Madd|228355|MAP-kinase activating death domain	AY263985|Madd|228355|MAP-kinase activating death domain	AY263986|Madd|228355|MAP-kinase activating death domain	AY263987|Madd|228355|MAP-kinase activating death domain	AY263988|Madd|228355|MAP-kinase activating death domain	AY263989|Madd|228355|MAP-kinase activating death domain	BC003255|Madd|228355|MAP-kinase activating death domain	NM_001177721|Madd|228355|MAP-kinase activating death domain	NM_001177722|Madd|228355|MAP-kinase activating death domain	NM_001177723|Madd|228355|MAP-kinase activating death domain	NM_001177724|Madd|228355|MAP-kinase activating death domain	NM_001177725|Madd|228355|MAP-kinase activating death domain	NM_001177726|Madd|228355|MAP-kinase activating death domain	NM_001177727|Madd|228355|MAP-kinase activating death domain	NM_001177728|Madd|228355|MAP-kinase activating death domain	NM_001177729|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr4_+_84530230_84530239	2.26725	HOX{A6,A7,B6,B7}.p2	NM_175275|Cntln|338349|centlein, centrosomal protein	NM_177385|Cntln|338349|centlein, centrosomal protein
mm9_v1_chr16_+_92292580_92292633	2.25615	HOX{A6,A7,B6,B7}.p2	AK008619|Kcne2|246133|potassium voltage-gated channel, Isk-related subfamily, gene 2	NM_134110|Kcne2|246133|potassium voltage-gated channel, Isk-related subfamily, gene 2
mm9_v1_chr5_-_37087204_37087208	2.24591	HOX{A6,A7,B6,B7}.p2	AK033480|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	NM_001081232|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed
mm9_v1_chr5_-_66542128_66542136	2.24376	HOX{A6,A7,B6,B7}.p2	AK089362|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr1_-_80210403_80210518	2.23413	HOX{A6,A7,B6,B7}.p2	BC150872|Fam124b|241128|family with sequence similarity 124, member B	AK043867|Fam124b|241128|family with sequence similarity 124, member B	NM_173425|Fam124b|241128|family with sequence similarity 124, member B
mm9_v1_chr10_+_61155005_61155061	2.23129	HOX{A6,A7,B6,B7}.p2	AK005495|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr12_+_53617063_53617093	2.22795	HOX{A6,A7,B6,B7}.p2	NM_009706|Arhgap5|11855|Rho GTPase activating protein 5	BC150823|Arhgap5|11855|Rho GTPase activating protein 5
mm9_v1_chr11_-_86399926_86400010	2.22633	HOX{A6,A7,B6,B7}.p2	AK217200|Tmem49|75909|transmembrane protein 49
mm9_v1_chr18_+_64414012_64414029	2.22442	HOX{A6,A7,B6,B7}.p2	AK161482|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_009182|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK015874|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr18_+_74893369_74893418	2.2213	HOX{A6,A7,B6,B7}.p2	AK033484|Myo5b|17919|myosin VB
mm9_v1_chr18_+_80409068_80409205	2.21894	HOX{A6,A7,B6,B7}.p2	AK183256|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr2_-_125549883_125549883	2.21309	HOX{A6,A7,B6,B7}.p2	AK036946|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4	NM_199022|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4
mm9_v1_chr16_+_43321404_43321450	2.21286	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_132781054_132781063	2.21276	HOX{A6,A7,B6,B7}.p2	AK213578|Wbp5|22381|WW domain binding protein 5
mm9_v1_chr12_-_21423383_21423468	2.21151	HOX{A6,A7,B6,B7}.p2	BC080802|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK159403|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK163237|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK145568|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK146371|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK150850|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK167397|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK012540|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK151715|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK008948|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK151437|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK151864|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK159817|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC085299|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm9_v1_chr9_-_71326587_71326617	2.20719	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_52715059_52715287	2.20446	HOX{A6,A7,B6,B7}.p2	BC150761|Ftl2|14337|ferritin light chain 2	BC081462|Ftl1|14325|ferritin light chain 1	BC106145|Ftl1|14325|ferritin light chain 1	J04716|Ftl1|14325|ferritin light chain 1	BC092259|Ftl1|14325|ferritin light chain 1	BC083350|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC019840|Ftl1|14325|ferritin light chain 1	BC085309|Ftl1|14325|ferritin light chain 1	BC106146|Ftl1|14325|ferritin light chain 1	BC020403|Ftl1|14325|ferritin light chain 1	AK152385|Ftl1|14325|ferritin light chain 1	AK150481|Ftl1|14325|ferritin light chain 1	AK152393|Ftl1|14325|ferritin light chain 1	AK167410|Ftl1|14325|ferritin light chain 1	AK168862|Ftl1|14325|ferritin light chain 1	AK002253|Ftl1|14325|ferritin light chain 1	AK002547|Ftl1|14325|ferritin light chain 1	AK011029|Ftl1|14325|ferritin light chain 1	AK150480|Ftl1|14325|ferritin light chain 1	AK152030|Ftl1|14325|ferritin light chain 1	AK152564|Ftl1|14325|ferritin light chain 1	AK152612|Ftl1|14325|ferritin light chain 1	AK168310|Ftl1|14325|ferritin light chain 1	AK168735|Ftl1|14325|ferritin light chain 1	AK168866|Ftl1|14325|ferritin light chain 1	AK169100|Ftl1|14325|ferritin light chain 1	AK002242|Ftl1|14325|ferritin light chain 1	AK011009|Ftl1|14325|ferritin light chain 1	AK011244|Ftl1|14325|ferritin light chain 1	AK075620|Ftl1|14325|ferritin light chain 1	AK145265|Ftl1|14325|ferritin light chain 1	AK145658|Ftl1|14325|ferritin light chain 1	AK150960|Ftl1|14325|ferritin light chain 1	AK151255|Ftl1|14325|ferritin light chain 1	AK159574|Ftl1|14325|ferritin light chain 1	AK169159|Ftl1|14325|ferritin light chain 1	AK088647|Ftl1|14325|ferritin light chain 1	NM_010240|Ftl1|14325|ferritin light chain 1
mm9_v1_chr11_-_54063400_54063400	2.20409	HOX{A6,A7,B6,B7}.p2	AK053196|Csf2|12981|colony stimulating factor 2 (granulocyte-macrophage)	NM_009969|Csf2|12981|colony stimulating factor 2 (granulocyte-macrophage)
mm9_v1_chr5_-_72978788_72978788	2.20349	HOX{A6,A7,B6,B7}.p2	AK084047|Gm5868|545758|predicted gene 5868	NM_001024147|Gm5868|545758|predicted gene 5868
mm9_v1_chr9_+_43909852_43909924	2.20123	HOX{A6,A7,B6,B7}.p2	AK053629|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5	NM_001190313|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5	NM_001190314|Mfrp|259172|membrane-type frizzled-related protein	NM_145613|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5	NM_147126|Mfrp|259172|membrane-type frizzled-related protein	AF469650|C1qtnf5|235312|C1q and tumor necrosis factor related protein 5
mm9_v1_chr6_-_124414668_124414803	2.20074	HOX{A6,A7,B6,B7}.p2	AJ278486|Clstn3|232370|calsyntenin 3	BC055054|Clstn3|232370|calsyntenin 3	AK032336|Clstn3|232370|calsyntenin 3	NM_153508|Clstn3|232370|calsyntenin 3
mm9_v1_chr6_-_38074549_38074585	2.20009	HOX{A6,A7,B6,B7}.p2	AK165464|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AF435090|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK128892|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK143790|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	NM_080467|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4
mm9_v1_chr4_+_135700717_135701086	2.19708	HOX{A6,A7,B6,B7}.p2	AK014306|Id3|15903|inhibitor of DNA binding 3	AK201456|Id3|15903|inhibitor of DNA binding 3	AK192106|Id3|15903|inhibitor of DNA binding 3	AK192107|Id3|15903|inhibitor of DNA binding 3	AK192467|Id3|15903|inhibitor of DNA binding 3	AK199050|Id3|15903|inhibitor of DNA binding 3	AK200444|Id3|15903|inhibitor of DNA binding 3	AK202308|Id3|15903|inhibitor of DNA binding 3
mm9_v1_chr8_-_5105158_5105231	2.19251	HOX{A6,A7,B6,B7}.p2	D87059|Slc10a2|20494|solute carrier family 10, member 2	BC120703|Slc10a2|20494|solute carrier family 10, member 2	BC125290|Slc10a2|20494|solute carrier family 10, member 2	AB002693|Slc10a2|20494|solute carrier family 10, member 2	AY529655|Slc10a2|20494|solute carrier family 10, member 2	AY529656|Slc10a2|20494|solute carrier family 10, member 2	NM_011388|Slc10a2|20494|solute carrier family 10, member 2
mm9_v1_chr3_+_95965959_95965978	2.19013	HOX{A6,A7,B6,B7}.p2	BC051083|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr19_+_7495023_7495107	2.18551	HOX{A6,A7,B6,B7}.p2	BC096549|2700081O15Rik|108899|RIKEN cDNA 2700081O15 gene	BC096638|2700081O15Rik|108899|RIKEN cDNA 2700081O15 gene
mm9_v1_chrX_-_133276147_133276147	2.18485	HOX{A6,A7,B6,B7}.p2	BC075653|Morf4l2|56397|mortality factor 4 like 2	NM_019768|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chrX_-_72823561_72823573	2.17901	HOX{A6,A7,B6,B7}.p2	BC050853|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr8_+_123651742_123651861	2.17237	HOX{A6,A7,B6,B7}.p2	BC137805|Foxl1|14241|forkhead box L1	BC137806|Foxl1|14241|forkhead box L1	AB221616|Foxl1|14241|forkhead box L1
mm9_v1_chr6_+_5333385_5333385	2.17191	HOX{A6,A7,B6,B7}.p2	BC046819|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC056440|Asb4|65255|ankyrin repeat and SOCS box-containing 4	NM_023048|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr2_+_109757803_109757808	2.17174	HOX{A6,A7,B6,B7}.p2	NM_172671|Lgr4|107515|leucine-rich repeat-containing G protein-coupled receptor 4
mm9_v1_chr9_+_120864938_120864992	2.17035	HOX{A6,A7,B6,B7}.p2	AK219273|Ctnnb1|12387|catenin (cadherin associated protein), beta 1
mm9_v1_chr5_+_21049368_21049436	2.1702	HOX{A6,A7,B6,B7}.p2	AK014767|Lrrc17|74511|leucine rich repeat containing 17	AK018071|Lrrc17|74511|leucine rich repeat containing 17	BC030317|Lrrc17|74511|leucine rich repeat containing 17
mm9_v1_chr16_-_55934909_55934966	2.16807	HOX{A6,A7,B6,B7}.p2	BC065773|Cep97|74201|centrosomal protein 97	AK079884|Cep97|74201|centrosomal protein 97	AK154885|Cep97|74201|centrosomal protein 97	AK012971|Cep97|74201|centrosomal protein 97	AK080249|Cep97|74201|centrosomal protein 97	BC067049|Cep97|74201|centrosomal protein 97	NM_001159364|Cep97|74201|centrosomal protein 97	NM_001159365|Cep97|74201|centrosomal protein 97	NM_001159366|Cep97|74201|centrosomal protein 97	NM_028815|Cep97|74201|centrosomal protein 97	AK040079|Cep97|74201|centrosomal protein 97
mm9_v1_chr7_-_110976314_110976437	2.16737	HOX{A6,A7,B6,B7}.p2	AB020013|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020014|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB020015|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020016|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB020017|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB364477|Hbb-b1|15129|hemoglobin, beta adult major chain	AB364478|Hbb-b2|15130|hemoglobin, beta adult minor chain	AF149782|Hbb-b2|15130|hemoglobin, beta adult minor chain
mm9_v1_chr8_-_87784612_87784676	2.16572	HOX{A6,A7,B6,B7}.p2	AK219106|Vps35|65114|vacuolar protein sorting 35
mm9_v1_chr4_+_109650629_109650657	2.15978	HOX{A6,A7,B6,B7}.p2	NM_172296|Dmrta2|242620|doublesex and mab-3 related transcription factor like family A2	AK080774|Dmrta2|242620|doublesex and mab-3 related transcription factor like family A2	AY145837|Dmrta2|242620|doublesex and mab-3 related transcription factor like family A2
mm9_v1_chr15_+_81767188_81767324	2.15668	HOX{A6,A7,B6,B7}.p2	NM_145473|Csdc2|105859|cold shock domain containing C2, RNA binding	AK132493|Csdc2|105859|cold shock domain containing C2, RNA binding	AK028916|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr2_-_164605216_164605262	2.15456	HOX{A6,A7,B6,B7}.p2	BC024390|Tnnc2|21925|troponin C2, fast	AK133548|Tnnc2|21925|troponin C2, fast	NM_009394|Tnnc2|21925|troponin C2, fast
mm9_v1_chr13_-_56397911_56397962	2.1517	HOX{A6,A7,B6,B7}.p2	AB041614|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AF192557|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	AF252873|Cxcl14|57266|chemokine (C-X-C motif) ligand 14	NM_019568|Cxcl14|57266|chemokine (C-X-C motif) ligand 14
mm9_v1_chrX_-_6952873_6952997	2.15034	HOX{A6,A7,B6,B7}.p2	BC137612|Usp27x|54651|ubiquitin specific peptidase 27, X chromosome	AK028249|Usp27x|54651|ubiquitin specific peptidase 27, X chromosome	NM_019461|Usp27x|54651|ubiquitin specific peptidase 27, X chromosome
mm9_v1_chr12_-_73337534_73337705	2.1471	HOX{A6,A7,B6,B7}.p2	AK013731|Rtn1|104001|reticulon 1	AK014358|Rtn1|104001|reticulon 1
mm9_v1_chr18_+_38611212_38611226	2.14639	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_137648101_137648216	2.14371	HOX{A6,A7,B6,B7}.p2	AK004065|Csrp1|13007|cysteine and glycine-rich protein 1	AK178605|Csrp1|13007|cysteine and glycine-rich protein 1	AK217688|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr16_+_25286902_25286906	2.13725	HOX{A6,A7,B6,B7}.p2	AK036796|Tprg|71338|transformation related protein 63 regulated	NM_175165|Tprg|71338|transformation related protein 63 regulated	AK017323|Tprg|71338|transformation related protein 63 regulated
mm9_v1_chr5_+_58109246_58109263	2.13338	HOX{A6,A7,B6,B7}.p2	NM_001122758|Pcdh7|54216|protocadherin 7	NM_018764|Pcdh7|54216|protocadherin 7
mm9_v1_chr3_-_88897207_88897284	2.12455	HOX{A6,A7,B6,B7}.p2	AK039664|Rusc1|72296|RUN and SH3 domain containing 1	BC056360|Rusc1|72296|RUN and SH3 domain containing 1	AK042689|Rusc1|72296|RUN and SH3 domain containing 1	NM_001083807|Rusc1|72296|RUN and SH3 domain containing 1	NM_028188|Rusc1|72296|RUN and SH3 domain containing 1
mm9_v1_chr8_+_65430028_65430291	2.12361	HOX{A6,A7,B6,B7}.p2	AJ278998|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK049843|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK220280|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK013644|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC017601|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	NM_023689|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK164338|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC053334|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm9_v1_chr13_+_55501008_55501081	2.12117	HOX{A6,A7,B6,B7}.p2	NM_011392|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	AK018740|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	AB163922|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	U22465|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	BC020529|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	L33878|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1
mm9_v1_chr5_+_104864168_104864178	2.11939	HOX{A6,A7,B6,B7}.p2	AK151069|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr19_-_7557690_7557778	2.11854	HOX{A6,A7,B6,B7}.p2	BC079882|Rtn3|20168|reticulon 3	BC014697|Rtn3|20168|reticulon 3	AK075883|Rtn3|20168|reticulon 3	AK165683|Rtn3|20168|reticulon 3	AK088670|Rtn3|20168|reticulon 3	AK049845|Rtn3|20168|reticulon 3	AF195940|Rtn3|20168|reticulon 3	AK148792|Rtn3|20168|reticulon 3	AK148947|Rtn3|20168|reticulon 3	AK036892|Rtn3|20168|reticulon 3	AK032109|Rtn3|20168|reticulon 3	AY427822|Rtn3|20168|reticulon 3	AY750849|Rtn3|20168|reticulon 3	AB046114|Rtn3|20168|reticulon 3	AY164700|Rtn3|20168|reticulon 3	NM_053076|Rtn3|20168|reticulon 3	NM_001003933|Rtn3|20168|reticulon 3	NM_001003934|Rtn3|20168|reticulon 3
mm9_v1_chr1_-_136700174_136700333	2.11838	HOX{A6,A7,B6,B7}.p2	AK051953|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK161046|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr3_+_89883564_89883639	2.11801	HOX{A6,A7,B6,B7}.p2	AK169821|Tpm3|59069|tropomyosin 3, gamma	AK167534|Tpm3|59069|tropomyosin 3, gamma	AK145238|Tpm3|59069|tropomyosin 3, gamma	AK145243|Tpm3|59069|tropomyosin 3, gamma	AK145804|Tpm3|59069|tropomyosin 3, gamma	AK151500|Tpm3|59069|tropomyosin 3, gamma	AK151571|Tpm3|59069|tropomyosin 3, gamma	AK151602|Tpm3|59069|tropomyosin 3, gamma	AK164086|Tpm3|59069|tropomyosin 3, gamma	AK165428|Tpm3|59069|tropomyosin 3, gamma	AK167581|Tpm3|59069|tropomyosin 3, gamma	X53753|Tpm3|59069|tropomyosin 3, gamma	AK088111|Tpm3|59069|tropomyosin 3, gamma	AK088902|Tpm3|59069|tropomyosin 3, gamma	AK151578|Tpm3|59069|tropomyosin 3, gamma	AK151991|Tpm3|59069|tropomyosin 3, gamma	AK152260|Tpm3|59069|tropomyosin 3, gamma	AK050665|Tpm3|59069|tropomyosin 3, gamma	AK166836|Tpm3|59069|tropomyosin 3, gamma	AK167268|Tpm3|59069|tropomyosin 3, gamma	AK169245|Tpm3|59069|tropomyosin 3, gamma	BC092045|Tpm3|59069|tropomyosin 3, gamma	AK146349|Tpm3|59069|tropomyosin 3, gamma	AK153031|Tpm3|59069|tropomyosin 3, gamma	AK169102|Tpm3|59069|tropomyosin 3, gamma	AK151595|Tpm3|59069|tropomyosin 3, gamma	AK152659|Tpm3|59069|tropomyosin 3, gamma	AK168843|Tpm3|59069|tropomyosin 3, gamma
mm9_v1_chr9_-_119977358_119977413	2.11443	HOX{A6,A7,B6,B7}.p2	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr8_-_74035667_74035683	2.11385	HOX{A6,A7,B6,B7}.p2	NM_032398|Plvap|84094|plasmalemma vesicle associated protein
mm9_v1_chr6_+_88775664_88775919	2.09884	HOX{A6,A7,B6,B7}.p2	AK195256|Mgll|23945|monoglyceride lipase	AK199521|Mgll|23945|monoglyceride lipase	AK213425|Mgll|23945|monoglyceride lipase	AK185298|Mgll|23945|monoglyceride lipase	AK186020|Mgll|23945|monoglyceride lipase	AK190741|Mgll|23945|monoglyceride lipase	AK191234|Mgll|23945|monoglyceride lipase	AK191381|Mgll|23945|monoglyceride lipase	AK193146|Mgll|23945|monoglyceride lipase	AK194428|Mgll|23945|monoglyceride lipase	AK195163|Mgll|23945|monoglyceride lipase	AK195208|Mgll|23945|monoglyceride lipase	AK197913|Mgll|23945|monoglyceride lipase	AK198715|Mgll|23945|monoglyceride lipase	AK199057|Mgll|23945|monoglyceride lipase	AK200299|Mgll|23945|monoglyceride lipase	AK202265|Mgll|23945|monoglyceride lipase	AK202325|Mgll|23945|monoglyceride lipase	AK208993|Mgll|23945|monoglyceride lipase	AK214675|Mgll|23945|monoglyceride lipase	AK136867|Mgll|23945|monoglyceride lipase
mm9_v1_chr6_-_113327779_113327831	2.0969	HOX{A6,A7,B6,B7}.p2	AK078906|Tada3|101206|transcriptional adaptor 3
mm9_v1_chr15_+_78860043_78860112	2.09614	HOX{A6,A7,B6,B7}.p2	AK195119|H1f0|14958|H1 histone family, member 0
mm9_v1_chr2_+_80478960_80478972	2.09471	HOX{A6,A7,B6,B7}.p2	NM_027091|Nup35|69482|nucleoporin 35	AK089997|Nup35|69482|nucleoporin 35
mm9_v1_chr13_-_60278723_60278734	2.09362	HOX{A6,A7,B6,B7}.p2	X65128|Gas1|14451|growth arrest specific 1
mm9_v1_chrX_-_16488889_16488889	2.09326	HOX{A6,A7,B6,B7}.p2	BC090623|Ndp|17986|Norrie disease (pseudoglioma) (human)	NM_010883|Ndp|17986|Norrie disease (pseudoglioma) (human)
mm9_v1_chr5_+_90947970_90948068	2.08488	HOX{A6,A7,B6,B7}.p2	AK143987|Afm|280662|afamin	BC100597|Afm|280662|afamin	NM_145146|Afm|280662|afamin	BC026681|Afm|280662|afamin
mm9_v1_chr3_+_157204031_157204041	2.08035	HOX{A6,A7,B6,B7}.p2	BC051187|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr2_+_158235580_158235588	2.0803	HOX{A6,A7,B6,B7}.p2	NM_177658|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)
mm9_v1_chr2_+_69708777_69708824	2.08028	HOX{A6,A7,B6,B7}.p2	AK200405|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr17_+_31814873_31814975	2.07951	HOX{A6,A7,B6,B7}.p2	AK143463|Cryaa|12954|crystallin, alpha A	BC085170|Cryaa|12954|crystallin, alpha A	BC085172|Cryaa|12954|crystallin, alpha A	NM_013501|Cryaa|12954|crystallin, alpha A	AJ310308|Cryaa|12954|crystallin, alpha A	BC092385|Cryaa|12954|crystallin, alpha A	J00376|Cryaa|12954|crystallin, alpha A
mm9_v1_chr16_+_65520846_65520963	2.07726	HOX{A6,A7,B6,B7}.p2	BC061213|Pou1f1|18736|POU domain, class 1, transcription factor 1	D12885|Pou1f1|18736|POU domain, class 1, transcription factor 1	NM_008849|Pou1f1|18736|POU domain, class 1, transcription factor 1	X57512|Pou1f1|18736|POU domain, class 1, transcription factor 1
mm9_v1_chr18_+_77365613_77365672	2.07584	HOX{A6,A7,B6,B7}.p2	AK078097|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr13_+_8202111_8202186	2.07358	HOX{A6,A7,B6,B7}.p2	AK134964|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK051460|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK043249|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139079|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139273|Adarb2|94191|adenosine deaminase, RNA-specific, B2	NM_052977|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC059822|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK046083|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK033916|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK045538|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC052426|Adarb2|94191|adenosine deaminase, RNA-specific, B2
mm9_v1_chr2_+_181498036_181498036	2.07304	HOX{A6,A7,B6,B7}.p2	BC063252|Myt1|17932|myelin transcription factor 1	NM_001171615|Myt1|17932|myelin transcription factor 1
mm9_v1_chr13_+_109444370_109444370	2.07102	HOX{A6,A7,B6,B7}.p2	AF536978|Pde4d|238871|phosphodiesterase 4D, cAMP specific	NM_011056|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr17_+_46390828_46391138	2.06845	HOX{A6,A7,B6,B7}.p2	AK134769|Gm88|224813|predicted gene 88	NM_001111142|Gm88|224813|predicted gene 88	BC147714|Gm88|224813|predicted gene 88	BC172136|Gm88|224813|predicted gene 88
mm9_v1_chr2_-_32279522_32279542	2.06718	HOX{A6,A7,B6,B7}.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr1_-_174128558_174128619	2.06717	HOX{A6,A7,B6,B7}.p2	BC092079|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr3_-_72860864_72860987	2.06709	HOX{A6,A7,B6,B7}.p2	BC066059|Slitrk3|386750|SLIT and NTRK-like family, member 3	NM_198864|Slitrk3|386750|SLIT and NTRK-like family, member 3	AK139378|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr7_+_87169699_87169719	2.06619	HOX{A6,A7,B6,B7}.p2	AK154953|Zfp710|209225|zinc finger protein 710	NM_001145999|Zfp710|209225|zinc finger protein 710	NM_001146000|Zfp710|209225|zinc finger protein 710	AK154871|Zfp710|209225|zinc finger protein 710
mm9_v1_chrX_+_135744582_135744582	2.06532	HOX{A6,A7,B6,B7}.p2	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr5_-_149364353_149364422	2.06442	HOX{A6,A7,B6,B7}.p2	NM_011908|Ubl3|24109|ubiquitin-like 3	BC024507|Ubl3|24109|ubiquitin-like 3	BC043729|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr6_-_135068260_135068300	2.06058	HOX{A6,A7,B6,B7}.p2	BC119192|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	BC119194|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	AK137739|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	AF218809|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	NM_053118|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D
mm9_v1_chr13_-_96661704_96661910	2.05969	HOX{A6,A7,B6,B7}.p2	BC094939|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC052916|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK080384|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK147360|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC150958|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK142813|Iqgap2|544963|IQ motif containing GTPase activating protein 2	NM_027711|Iqgap2|544963|IQ motif containing GTPase activating protein 2
mm9_v1_chr9_-_7932402_7932403	2.05478	HOX{A6,A7,B6,B7}.p2	AK212471|Yap1|22601|yes-associated protein 1	AK215870|Yap1|22601|yes-associated protein 1
mm9_v1_chr9_-_103119803_103119823	2.05404	HOX{A6,A7,B6,B7}.p2	M23015|Trf|22041|transferrin	S67218|Trf|22041|transferrin
mm9_v1_chr7_+_5013744_5013873	2.05273	HOX{A6,A7,B6,B7}.p2	BC043071|U2af2|22185|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	NM_133671|U2af2|22185|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	AK078496|U2af2|22185|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	X64587|U2af2|22185|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
mm9_v1_chr5_-_89088843_89089007	2.0498	HOX{A6,A7,B6,B7}.p2	AK208573|Grsf1|231413|G-rich RNA sequence binding factor 1	AK211991|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr16_-_28445276_28445356	2.04545	HOX{A6,A7,B6,B7}.p2	U66201|Fgf12|14167|fibroblast growth factor 12	AK034335|Fgf12|14167|fibroblast growth factor 12	NM_183064|Fgf12|14167|fibroblast growth factor 12	AF020738|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chrX_+_108009728_108009803	2.04526	HOX{A6,A7,B6,B7}.p2	BC138657|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC145919|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC052012|Pou3f4|18994|POU domain, class 3, transcription factor 4	X66603|Pou3f4|18994|POU domain, class 3, transcription factor 4	AK158302|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC086670|Pou3f4|18994|POU domain, class 3, transcription factor 4	NM_008901|Pou3f4|18994|POU domain, class 3, transcription factor 4
mm9_v1_chr19_+_27291507_27291624	2.041	HOX{A6,A7,B6,B7}.p2	AK044683|Vldlr|22359|very low density lipoprotein receptor	AK076172|Vldlr|22359|very low density lipoprotein receptor	NM_001161420|Vldlr|22359|very low density lipoprotein receptor	NM_013703|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr18_-_58169723_58169818	2.03629	HOX{A6,A7,B6,B7}.p2	BC063774|Fbn2|14119|fibrillin 2
mm9_v1_chr7_+_71646515_71646591	2.02812	HOX{A6,A7,B6,B7}.p2	BC057620|Apba2|11784|amyloid beta (A4) precursor protein-binding, family A, member 2	NM_007461|Apba2|11784|amyloid beta (A4) precursor protein-binding, family A, member 2
mm9_v1_chr11_+_97258202_97258205	2.02378	HOX{A6,A7,B6,B7}.p2	AK138734|Socs7|192157|suppressor of cytokine signaling 7
mm9_v1_chr14_+_120674921_120674929	2.02176	HOX{A6,A7,B6,B7}.p2	AK151913|Mbnl2|105559|muscleblind-like 2	AK151926|Mbnl2|105559|muscleblind-like 2	AK151957|Mbnl2|105559|muscleblind-like 2	AK028797|Mbnl2|105559|muscleblind-like 2	AK085709|Mbnl2|105559|muscleblind-like 2	AK164372|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr19_-_21467250_21467261	2.01208	HOX{A6,A7,B6,B7}.p2	AK080065|Gda|14544|guanine deaminase
mm9_v1_chr5_-_122951791_122951906	2.01127	HOX{A6,A7,B6,B7}.p2	BC054531|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC054748|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AJ131821|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AJ223584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr2_-_12933305_12933373	2.01031	HOX{A6,A7,B6,B7}.p2	AB044560|C1ql3|227580|C1q-like 3
mm9_v1_chr2_-_165981085_165981115	2.0098	HOX{A6,A7,B6,B7}.p2	AK165183|Sulf2|72043|sulfatase 2	AK028874|Sulf2|72043|sulfatase 2	AK008108|Sulf2|72043|sulfatase 2	AK036685|Sulf2|72043|sulfatase 2
mm9_v1_chr12_+_100009231_100009268	2.0043	HOX{A6,A7,B6,B7}.p2	NM_001160108|Zc3h14|75553|zinc finger CCCH type containing 14	AK006009|Zc3h14|75553|zinc finger CCCH type containing 14
mm9_v1_chr18_+_37152024_37152120	2.00338	HOX{A6,A7,B6,B7}.p2	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr1_-_175297624_175297771	2.00128	HOX{A6,A7,B6,B7}.p2	AY059393|Cadm3|94332|cell adhesion molecule 3	BC115417|Cadm3|94332|cell adhesion molecule 3	BC115418|Cadm3|94332|cell adhesion molecule 3	BC079837|Cadm3|94332|cell adhesion molecule 3	AF195662|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr6_+_134932018_134932018	2.00093	HOX{A6,A7,B6,B7}.p2	NM_001109914|Apold1|381823|apolipoprotein L domain containing 1
mm9_v1_chr2_+_65683823_65683911	1.99887	HOX{A6,A7,B6,B7}.p2	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr8_+_94192087_94192089	1.99803	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr5_+_98609872_98610052	1.99727	HOX{A6,A7,B6,B7}.p2	AK050852|Prdm8|77630|PR domain containing 8	NM_029947|Prdm8|77630|PR domain containing 8	AK036202|Prdm8|77630|PR domain containing 8	AK044713|Prdm8|77630|PR domain containing 8	BC141020|Prdm8|77630|PR domain containing 8
mm9_v1_chr9_-_57454023_57454087	1.99333	HOX{A6,A7,B6,B7}.p2	AY264290|Cplx3|235415|complexin 3	BC016632|Cplx3|235415|complexin 3	BC024854|Cplx3|235415|complexin 3	BC033343|Cplx3|235415|complexin 3	AK044211|Cplx3|235415|complexin 3	BC017128|Cplx3|235415|complexin 3	NM_146223|Cplx3|235415|complexin 3
mm9_v1_chr14_+_120674913_120674920	1.99182	HOX{A6,A7,B6,B7}.p2	AK220470|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr3_+_95463691_95463776	1.98782	HOX{A6,A7,B6,B7}.p2	AK010424|Mcl1|17210|myeloid cell leukemia sequence 1	AK160594|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr11_+_28753190_28753243	1.98382	HOX{A6,A7,B6,B7}.p2	AK077302|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	NM_146015|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	AY251056|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr11_-_102680999_102681013	1.98047	HOX{A6,A7,B6,B7}.p2	BC071230|Gjc1|14615|gap junction protein, gamma 1	NM_001159383|Gjc1|14615|gap junction protein, gamma 1	AY390396|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr5_+_23919268_23919268	1.97253	HOX{A6,A7,B6,B7}.p2	BC054460|Accn3|171209|amiloride-sensitive cation channel 3	NM_183000|Accn3|171209|amiloride-sensitive cation channel 3
mm9_v1_chr3_+_103811134_103811169	1.97199	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_120285920_120286055	1.97169	HOX{A6,A7,B6,B7}.p2	AK080782|Clasp1|76707|CLIP associating protein 1	BC157938|Clasp1|76707|CLIP associating protein 1	BC158064|Clasp1|76707|CLIP associating protein 1	AJ276962|Clasp1|76707|CLIP associating protein 1	AK031181|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr1_-_75138905_75138941	1.97066	HOX{A6,A7,B6,B7}.p2	BC028815|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK029090|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	NM_026977|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr14_+_120674933_120674934	1.96715	HOX{A6,A7,B6,B7}.p2	AK159213|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr1_+_169528706_169528770	1.96624	HOX{A6,A7,B6,B7}.p2	X66225|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr3_-_49561168_49561243	1.96596	HOX{A6,A7,B6,B7}.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr3_+_107895985_107896200	1.96573	HOX{A6,A7,B6,B7}.p2	BC016272|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	NM_008141|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131941|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131943|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC085102|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	L10666|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	AK009388|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2
mm9_v1_chr4_+_53556496_53556552	1.96163	HOX{A6,A7,B6,B7}.p2	BC025941|Slc44a1|100434|solute carrier family 44, member 1
mm9_v1_chr1_-_179178874_179178897	1.96157	HOX{A6,A7,B6,B7}.p2	AF124142|Akt3|23797|thymoma viral proto-oncogene 3	BC066861|Akt3|23797|thymoma viral proto-oncogene 3	NM_011785|Akt3|23797|thymoma viral proto-oncogene 3
mm9_v1_chr2_-_110203298_110203336	1.96142	HOX{A6,A7,B6,B7}.p2	AK011548|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK012026|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr5_-_8422533_8422723	1.94621	HOX{A6,A7,B6,B7}.p2	BC138709|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC138710|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC145392|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AJ003132|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC069983|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK132403|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK014480|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC050827|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_001190717|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_013726|Dbf4|27214|DBF4 homolog (S. cerevisiae)
mm9_v1_chr16_-_97392319_97392342	1.94545	HOX{A6,A7,B6,B7}.p2	AY005483|Dscam|13508|Down syndrome cell adhesion molecule	NM_031174|Dscam|13508|Down syndrome cell adhesion molecule
mm9_v1_chr15_-_102993714_102993747	1.93905	HOX{A6,A7,B6,B7}.p2	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr11_-_97049185_97049278	1.93637	HOX{A6,A7,B6,B7}.p2	BC055115|Kpnb1|16211|karyopherin (importin) beta 1	AK077709|Kpnb1|16211|karyopherin (importin) beta 1	NM_008379|Kpnb1|16211|karyopherin (importin) beta 1	AK147175|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr2_+_153988342_153988366	1.93559	HOX{A6,A7,B6,B7}.p2	AK009835|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010012|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010159|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	NM_025990|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009441|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009629|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009803|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010145|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009329|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009531|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009562|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009580|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009695|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010051|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010158|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010115|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	BC115526|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	BC115527|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene
mm9_v1_chr1_-_65128840_65128863	1.93156	HOX{A6,A7,B6,B7}.p2	BC056455|Crygb|12965|crystallin, gamma B	NM_144761|Crygb|12965|crystallin, gamma B	EF426303|Crygb|12965|crystallin, gamma B	AK143110|Crygb|12965|crystallin, gamma B
mm9_v1_chr6_+_5340417_5340708	1.92994	HOX{A6,A7,B6,B7}.p2	AK132068|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK018373|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC054745|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK076004|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AF155355|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK133894|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr14_-_60845511_60845640	1.92911	HOX{A6,A7,B6,B7}.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr9_-_70269246_70269297	1.92474	HOX{A6,A7,B6,B7}.p2	CT010286|Ccnb2|12442|cyclin B2	BC008247|Ccnb2|12442|cyclin B2
mm9_v1_chr19_+_43856793_43856893	1.9221	HOX{A6,A7,B6,B7}.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr1_-_25886551_25886551	1.9186	HOX{A6,A7,B6,B7}.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr15_-_36700634_36700638	1.91825	HOX{A6,A7,B6,B7}.p2	AK003664|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr14_-_52898946_52899069	1.91814	HOX{A6,A7,B6,B7}.p2	AK044202|Rab2b|76338|RAB2B, member RAS oncogene family	BC033312|Rab2b|76338|RAB2B, member RAS oncogene family	AK005230|Rab2b|76338|RAB2B, member RAS oncogene family	BC054719|Rab2b|76338|RAB2B, member RAS oncogene family	AK038393|Rab2b|76338|RAB2B, member RAS oncogene family	AK038576|Rab2b|76338|RAB2B, member RAS oncogene family	AK169657|Rab2b|76338|RAB2B, member RAS oncogene family	BC046334|Rab2b|76338|RAB2B, member RAS oncogene family	NM_172601|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr8_+_97197548_97197604	1.91506	HOX{A6,A7,B6,B7}.p2	AK209782|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr11_+_100437204_100437208	1.91477	HOX{A6,A7,B6,B7}.p2	AK041969|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	AK140280|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	NM_001146318|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr2_+_163264188_163264268	1.91067	HOX{A6,A7,B6,B7}.p2	NM_144891|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK164991|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK140488|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK141371|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	BC019941|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1
mm9_v1_chr6_+_124948627_124948627	1.9104	HOX{A6,A7,B6,B7}.p2	AK148352|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_001145926|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr3_-_58689068_58689133	1.90895	HOX{A6,A7,B6,B7}.p2	AK041623|Clrn1|229320|clarin 1	AK042523|Clrn1|229320|clarin 1	BC132254|Clrn1|229320|clarin 1	BC132256|Clrn1|229320|clarin 1	BC145202|Clrn1|229320|clarin 1	AF495718|Clrn1|229320|clarin 1	AF495719|Clrn1|229320|clarin 1	AF495720|Clrn1|229320|clarin 1	NM_153384|Clrn1|229320|clarin 1	NM_153385|Clrn1|229320|clarin 1	NM_153386|Clrn1|229320|clarin 1
mm9_v1_chr5_-_122952179_122952182	1.90288	HOX{A6,A7,B6,B7}.p2	AK220538|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr2_+_121282819_121282836	1.89887	HOX{A6,A7,B6,B7}.p2	NM_026318|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	AK003580|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC038469|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	AK009109|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr12_+_109648864_109648871	1.89355	HOX{A6,A7,B6,B7}.p2	BC059839|Eml1|68519|echinoderm microtubule associated protein like 1	NM_001043336|Eml1|68519|echinoderm microtubule associated protein like 1	BC125289|Eml1|68519|echinoderm microtubule associated protein like 1	BC144757|Eml1|68519|echinoderm microtubule associated protein like 1
mm9_v1_chr13_-_60278558_60278627	1.89108	HOX{A6,A7,B6,B7}.p2	BC058628|Gas1|14451|growth arrest specific 1
mm9_v1_chr10_-_84590718_84590771	1.88917	HOX{A6,A7,B6,B7}.p2	BC046619|Mterfd3|74238|MTERF domain containing 3	AK047778|Mterfd3|74238|MTERF domain containing 3	AK039816|Mterfd3|74238|MTERF domain containing 3	NM_028832|Mterfd3|74238|MTERF domain containing 3
mm9_v1_chr3_-_57379600_57379797	1.88849	HOX{A6,A7,B6,B7}.p2	AK213529|Wwtr1|97064|WW domain containing transcription regulator 1	BC004640|Wwtr1|97064|WW domain containing transcription regulator 1	AK142720|Wwtr1|97064|WW domain containing transcription regulator 1	AK009983|Wwtr1|97064|WW domain containing transcription regulator 1	AJ299430|Wwtr1|97064|WW domain containing transcription regulator 1	BC014727|Wwtr1|97064|WW domain containing transcription regulator 1	AK011504|Wwtr1|97064|WW domain containing transcription regulator 1	NM_133784|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chrX_-_47150892_47150921	1.88759	HOX{A6,A7,B6,B7}.p2	AK030452|Igsf1|209268|immunoglobulin superfamily, member 1	BC089474|Igsf1|209268|immunoglobulin superfamily, member 1	AY227771|Igsf1|209268|immunoglobulin superfamily, member 1	AY227772|Igsf1|209268|immunoglobulin superfamily, member 1	BC100420|Igsf1|209268|immunoglobulin superfamily, member 1	NM_177591|Igsf1|209268|immunoglobulin superfamily, member 1	NM_177915|Igsf1|209268|immunoglobulin superfamily, member 1
mm9_v1_chr15_-_37909575_37909591	1.88598	HOX{A6,A7,B6,B7}.p2	BC064751|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chr4_-_69587193_69587277	1.88032	HOX{A6,A7,B6,B7}.p2	AK030082|Gm11223|100039888|stathmin 1 pseudogene
mm9_v1_chr11_-_6333725_6333827	1.87951	HOX{A6,A7,B6,B7}.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chrX_-_133275812_133275890	1.8794	HOX{A6,A7,B6,B7}.p2	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr8_-_74035629_74035657	1.87932	HOX{A6,A7,B6,B7}.p2	AF348403|Plvap|84094|plasmalemma vesicle associated protein	AF369900|Plvap|84094|plasmalemma vesicle associated protein
mm9_v1_chr9_-_119118203_119118222	1.87923	HOX{A6,A7,B6,B7}.p2	BC021449|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	AF529220|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	NM_133980|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13
mm9_v1_chr2_-_106899807_106899807	1.87698	HOX{A6,A7,B6,B7}.p2	AK017593|Fshb|14308|follicle stimulating hormone beta	BC061159|Fshb|14308|follicle stimulating hormone beta	NM_008045|Fshb|14308|follicle stimulating hormone beta
mm9_v1_chr8_-_128093602_128093782	1.87285	HOX{A6,A7,B6,B7}.p2	AK132916|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2	BC072593|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2
mm9_v1_chr11_+_54683756_54683778	1.87205	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_70298163_70298251	1.86943	HOX{A6,A7,B6,B7}.p2	AK161156|9330151L19Rik|414085|RIKEN cDNA 9330151L19 gene	AK154174|9330151L19Rik|414085|RIKEN cDNA 9330151L19 gene	AK034052|9330151L19Rik|414085|RIKEN cDNA 9330151L19 gene
mm9_v1_chr16_-_89818596_89818596	1.86411	HOX{A6,A7,B6,B7}.p2	AK136856|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145887|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr11_+_68912444_68912492	1.86405	HOX{A6,A7,B6,B7}.p2	NM_011065|Per1|18626|period homolog 1 (Drosophila)	BC091645|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr11_-_11798138_11798148	1.86297	HOX{A6,A7,B6,B7}.p2	NM_001190448|Ddc|13195|dopa decarboxylase
mm9_v1_chr5_-_121459315_121459358	1.85763	HOX{A6,A7,B6,B7}.p2	D29965|Rph3a|19894|rabphilin 3A	AB112924|Rph3a|19894|rabphilin 3A
mm9_v1_chr2_+_174153230_174153414	1.85747	HOX{A6,A7,B6,B7}.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr8_+_37552244_37552244	1.85501	HOX{A6,A7,B6,B7}.p2	BC052184|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene	NM_176952|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene
mm9_v1_chr17_-_45704908_45704999	1.85485	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_37654443_37654469	1.85292	HOX{A6,A7,B6,B7}.p2	BC096421|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	AK004958|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	AK009807|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	AK018707|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	NM_026610|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	BC056229|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr8_+_96561135_96561146	1.85167	HOX{A6,A7,B6,B7}.p2	AK049824|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC040267|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr7_+_87406066_87406184	1.85109	HOX{A6,A7,B6,B7}.p2	NM_031375|Ngrn|83485|neugrin, neurite outgrowth associated	AK083330|Ngrn|83485|neugrin, neurite outgrowth associated	AK144756|Ngrn|83485|neugrin, neurite outgrowth associated	BC004034|Ngrn|83485|neugrin, neurite outgrowth associated	AK146059|Ngrn|83485|neugrin, neurite outgrowth associated	AB047544|Ngrn|83485|neugrin, neurite outgrowth associated
mm9_v1_chr4_+_86221626_86221649	1.8506	HOX{A6,A7,B6,B7}.p2	AK144591|Rraga|68441|Ras-related GTP binding A
mm9_v1_chr11_-_58615400_58615517	1.85029	HOX{A6,A7,B6,B7}.p2	FJ468008|Fam183b|75429|family with sequence similarity 183, member B	BC094630|Fam183b|75429|family with sequence similarity 183, member B	BC061254|Fam183b|75429|family with sequence similarity 183, member B	BC048748|Fam183b|75429|family with sequence similarity 183, member B	AK157972|Fam183b|75429|family with sequence similarity 183, member B	AK013920|Fam183b|75429|family with sequence similarity 183, member B	NM_001162878|Fam183b|75429|family with sequence similarity 183, member B	NM_029283|Fam183b|75429|family with sequence similarity 183, member B	BC126964|Fam183b|75429|family with sequence similarity 183, member B	BC117741|Fam183b|75429|family with sequence similarity 183, member B
mm9_v1_chr14_+_103912557_103912637	1.84983	HOX{A6,A7,B6,B7}.p2	NM_022886|Scel|64929|sciellin	AF245700|Scel|64929|sciellin	BC025142|Scel|64929|sciellin	BC112380|Scel|64929|sciellin	AK020346|Scel|64929|sciellin	BC111874|Scel|64929|sciellin
mm9_v1_chr18_+_35020867_35020884	1.84661	HOX{A6,A7,B6,B7}.p2	M20157|Egr1|13653|early growth response 1
mm9_v1_chr17_-_36169573_36169660	1.84577	HOX{A6,A7,B6,B7}.p2	AF100699|H2-T23|15040|histocompatibility 2, T region locus 23	AF100700|H2-T23|15040|histocompatibility 2, T region locus 23	AF100702|H2-T23|15040|histocompatibility 2, T region locus 23	AF057279|H2-T23|15040|histocompatibility 2, T region locus 23	AF082510|H2-T23|15040|histocompatibility 2, T region locus 23	BC099472|H2-T23|15040|histocompatibility 2, T region locus 23	AB359230|H2-T23|15040|histocompatibility 2, T region locus 23	AK133502|H2-T23|15040|histocompatibility 2, T region locus 23	M11284|H2-T23|15040|histocompatibility 2, T region locus 23	NM_010398|H2-T23|15040|histocompatibility 2, T region locus 23
mm9_v1_chr19_+_26681759_26681957	1.84384	HOX{A6,A7,B6,B7}.p2	AK147322|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr5_+_104864136_104864144	1.84281	HOX{A6,A7,B6,B7}.p2	AK160540|Spp1|20750|secreted phosphoprotein 1	NM_009263|Spp1|20750|secreted phosphoprotein 1	AK133555|Spp1|20750|secreted phosphoprotein 1	AK145099|Spp1|20750|secreted phosphoprotein 1	AK149588|Spp1|20750|secreted phosphoprotein 1	AK150819|Spp1|20750|secreted phosphoprotein 1	AK150845|Spp1|20750|secreted phosphoprotein 1	AK151562|Spp1|20750|secreted phosphoprotein 1	AK153089|Spp1|20750|secreted phosphoprotein 1	AK154908|Spp1|20750|secreted phosphoprotein 1	AK165393|Spp1|20750|secreted phosphoprotein 1	AK165965|Spp1|20750|secreted phosphoprotein 1	AK166395|Spp1|20750|secreted phosphoprotein 1	AK171158|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr1_+_169548381_169548439	1.83829	HOX{A6,A7,B6,B7}.p2	NM_001159731|Rxrg|20183|retinoid X receptor gamma	S62952|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr4_-_123361602_123361602	1.83602	HOX{A6,A7,B6,B7}.p2	AF150755|Macf1|11426|microtubule-actin crosslinking factor 1	DQ067088|Macf1|11426|microtubule-actin crosslinking factor 1	NM_009600|Macf1|11426|microtubule-actin crosslinking factor 1
mm9_v1_chr13_+_113657736_113657889	1.83531	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_-_41674337_41674343	1.83499	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_99354417_99354437	1.83464	HOX{A6,A7,B6,B7}.p2	BC019972|Krt23|94179|keratin 23	AF102849|Krt23|94179|keratin 23	NM_033373|Krt23|94179|keratin 23	AK036901|Krt23|94179|keratin 23	AK036954|Krt23|94179|keratin 23
mm9_v1_chr17_-_34136793_34136951	1.83341	HOX{A6,A7,B6,B7}.p2	M14827|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr15_+_81641869_81641976	1.83124	HOX{A6,A7,B6,B7}.p2	AK145125|Tef|21685|thyrotroph embryonic factor	AK154472|Tef|21685|thyrotroph embryonic factor	BC036982|Tef|21685|thyrotroph embryonic factor	AF194420|Tef|21685|thyrotroph embryonic factor	AK147965|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr15_-_13103346_13103429	1.82847	HOX{A6,A7,B6,B7}.p2	NM_007666|Cdh6|12563|cadherin 6	AK134611|Cdh6|12563|cadherin 6
mm9_v1_chr18_-_44821919_44821954	1.82307	HOX{A6,A7,B6,B7}.p2	AK054528|Mcc|328949|mutated in colorectal cancers	NM_001085374|Mcc|328949|mutated in colorectal cancers	AK086823|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr1_+_72629814_72629847	1.8226	HOX{A6,A7,B6,B7}.p2	NM_018817|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK146767|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK169465|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK154020|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AF088884|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK042332|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK077878|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK083488|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK035854|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
mm9_v1_chr2_+_154839149_154839305	1.81533	HOX{A6,A7,B6,B7}.p2	S70326|a|50518|nonagouti	L06451|a|50518|nonagouti	S70394|a|50518|nonagouti	L06941|a|50518|nonagouti	NM_015770|a|50518|nonagouti
mm9_v1_chr5_-_138052555_138052672	1.81475	HOX{A6,A7,B6,B7}.p2	AB008548|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK142615|Pcolce|18542|procollagen C-endopeptidase enhancer protein	X57337|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK159430|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK159940|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK144392|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK146829|Pcolce|18542|procollagen C-endopeptidase enhancer protein	NM_008788|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK162524|Pcolce|18542|procollagen C-endopeptidase enhancer protein
mm9_v1_chr3_-_95085997_95085997	1.81473	HOX{A6,A7,B6,B7}.p2	BC057546|Prune|229589|prune homolog (Drosophila)	NM_173347|Prune|229589|prune homolog (Drosophila)
mm9_v1_chr5_+_125365789_125365870	1.81469	HOX{A6,A7,B6,B7}.p2	BC096550|Zfp664|269704|zinc finger protein 664
mm9_v1_chr11_+_49933305_49933398	1.8119	HOX{A6,A7,B6,B7}.p2	BC038527|LOC552912|552912|hypothetical LOC552912
mm9_v1_chr1_+_100028032_100028043	1.81007	HOX{A6,A7,B6,B7}.p2	AK007349|1810006J02Rik|69030|RIKEN cDNA 1810006J02 gene
mm9_v1_chr12_+_3954950_3954950	1.80398	HOX{A6,A7,B6,B7}.p2	AK017492|Pomc|18976|pro-opiomelanocortin-alpha	AK017581|Pomc|18976|pro-opiomelanocortin-alpha	AK030714|Pomc|18976|pro-opiomelanocortin-alpha	AK077426|Pomc|18976|pro-opiomelanocortin-alpha	AK133592|Pomc|18976|pro-opiomelanocortin-alpha	AK133646|Pomc|18976|pro-opiomelanocortin-alpha	AK133740|Pomc|18976|pro-opiomelanocortin-alpha	AK133776|Pomc|18976|pro-opiomelanocortin-alpha	AK133800|Pomc|18976|pro-opiomelanocortin-alpha	BC061215|Pomc|18976|pro-opiomelanocortin-alpha	NM_008895|Pomc|18976|pro-opiomelanocortin-alpha
mm9_v1_chr1_+_87804881_87804999	1.80332	HOX{A6,A7,B6,B7}.p2	AK195066|Itm2c|64294|integral membrane protein 2C	AK181068|Itm2c|64294|integral membrane protein 2C	AK184077|Itm2c|64294|integral membrane protein 2C	AK184543|Itm2c|64294|integral membrane protein 2C	AK184789|Itm2c|64294|integral membrane protein 2C	AK185815|Itm2c|64294|integral membrane protein 2C	AK187837|Itm2c|64294|integral membrane protein 2C	AK202316|Itm2c|64294|integral membrane protein 2C	AK208625|Itm2c|64294|integral membrane protein 2C	AK210908|Itm2c|64294|integral membrane protein 2C	AK214441|Itm2c|64294|integral membrane protein 2C	AK214627|Itm2c|64294|integral membrane protein 2C	AK188840|Itm2c|64294|integral membrane protein 2C	AK215527|Itm2c|64294|integral membrane protein 2C
mm9_v1_chr13_-_12199109_12199211	1.80092	HOX{A6,A7,B6,B7}.p2	BC043140|Ryr2|20191|ryanodine receptor 2, cardiac	BC059061|Ryr2|20191|ryanodine receptor 2, cardiac	NM_023868|Ryr2|20191|ryanodine receptor 2, cardiac
mm9_v1_chr19_-_57271875_57272120	1.79629	HOX{A6,A7,B6,B7}.p2	AF404775|Ablim1|226251|actin-binding LIM protein 1	AK143907|Ablim1|226251|actin-binding LIM protein 1	NM_001103177|Ablim1|226251|actin-binding LIM protein 1	AK122196|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr16_+_87699143_87699302	1.79433	HOX{A6,A7,B6,B7}.p2	D86603|Bach1|12013|BTB and CNC homology 1	AK140765|Bach1|12013|BTB and CNC homology 1	AK140903|Bach1|12013|BTB and CNC homology 1	NM_007520|Bach1|12013|BTB and CNC homology 1	AK030871|Bach1|12013|BTB and CNC homology 1	AK141405|Bach1|12013|BTB and CNC homology 1	BC057894|Bach1|12013|BTB and CNC homology 1
mm9_v1_chrX_-_108651553_108651553	1.79347	HOX{A6,A7,B6,B7}.p2	NM_025949|Rps6ka6|67071|ribosomal protein S6 kinase polypeptide 6
mm9_v1_chr5_-_149806774_149806813	1.79158	HOX{A6,A7,B6,B7}.p2	AK031217|5930430L01Rik|319982|RIKEN cDNA 5930430L01 gene	AK148051|5930430L01Rik|319982|RIKEN cDNA 5930430L01 gene	AK036974|5930430L01Rik|319982|RIKEN cDNA 5930430L01 gene
mm9_v1_chr3_+_14480698_14480724	1.78624	HOX{A6,A7,B6,B7}.p2	AB055005|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12	AK085644|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12	NM_080852|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12	AJ417663|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
mm9_v1_chr17_+_12777054_12777126	1.78546	HOX{A6,A7,B6,B7}.p2	AJ006036|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	NM_013667|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK143892|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK052658|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC069911|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC015250|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2
mm9_v1_chr10_+_96079634_96079769	1.78418	HOX{A6,A7,B6,B7}.p2	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr11_+_110260435_110260577	1.78394	HOX{A6,A7,B6,B7}.p2	AK043482|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK086722|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK138757|Map2k6|26399|mitogen-activated protein kinase kinase 6	NM_011943|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK077712|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK140289|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK141708|Map2k6|26399|mitogen-activated protein kinase kinase 6	BC075652|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK162671|Map2k6|26399|mitogen-activated protein kinase kinase 6	X97052|Map2k6|26399|mitogen-activated protein kinase kinase 6
mm9_v1_chr10_-_101953046_101953066	1.78391	HOX{A6,A7,B6,B7}.p2	AF304160|Nts|67405|neurotensin	BC043024|Nts|67405|neurotensin	NM_024435|Nts|67405|neurotensin	AK017202|Nts|67405|neurotensin	AK017212|Nts|67405|neurotensin
mm9_v1_chr3_-_123375305_123375392	1.78373	HOX{A6,A7,B6,B7}.p2	BC112404|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC079622|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_031186|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AF221095|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm9_v1_chr19_-_40588297_40588344	1.78164	HOX{A6,A7,B6,B7}.p2	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr11_-_99354449_99354450	1.77562	HOX{A6,A7,B6,B7}.p2	BC003472|Krt23|94179|keratin 23	AK145247|Krt23|94179|keratin 23
mm9_v1_chr7_+_49371840_49371840	1.77562	HOX{A6,A7,B6,B7}.p2	NM_001105057|Vmn2r60|637898|vomeronasal 2, receptor 60
mm9_v1_chr15_+_39577477_39577489	1.77285	HOX{A6,A7,B6,B7}.p2	AB109560|Tm7sf4|75766|transmembrane 7 superfamily member 4	AB109561|Tm7sf4|75766|transmembrane 7 superfamily member 4	AK014697|Tm7sf4|75766|transmembrane 7 superfamily member 4	AK154384|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517483|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517484|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517485|Tm7sf4|75766|transmembrane 7 superfamily member 4	NM_029422|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC139146|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC145557|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC145558|Tm7sf4|75766|transmembrane 7 superfamily member 4
mm9_v1_chr1_+_89110855_89110976	1.7724	HOX{A6,A7,B6,B7}.p2	BC028903|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2
mm9_v1_chr18_+_37595274_37595294	1.77122	HOX{A6,A7,B6,B7}.p2	NM_053137|Pcdhb12|93883|protocadherin beta 12
mm9_v1_chr1_-_82765022_82765035	1.77117	HOX{A6,A7,B6,B7}.p2	BC117736|Tm4sf20|66261|transmembrane 4 L six family member 20	AK007532|Tm4sf20|66261|transmembrane 4 L six family member 20	AK017154|Tm4sf20|66261|transmembrane 4 L six family member 20	AK017195|Tm4sf20|66261|transmembrane 4 L six family member 20	NM_025453|Tm4sf20|66261|transmembrane 4 L six family member 20	AK017209|Tm4sf20|66261|transmembrane 4 L six family member 20
mm9_v1_chr8_+_119983566_119983649	1.76423	HOX{A6,A7,B6,B7}.p2	AK049761|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr10_+_62849310_62849422	1.7605	HOX{A6,A7,B6,B7}.p2	NM_013888|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AK032207|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AF132906|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC013501|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC071211|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12
mm9_v1_chr15_+_102038697_102038697	1.75938	HOX{A6,A7,B6,B7}.p2	BC030410|Zfp740|68744|zinc finger protein 740	NM_153194|Zfp740|68744|zinc finger protein 740
mm9_v1_chr10_+_122116066_122116255	1.75182	HOX{A6,A7,B6,B7}.p2	AK040194|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK029461|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK150309|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr17_-_37727295_37727325	1.74849	HOX{A6,A7,B6,B7}.p2	NM_146287|Olfr114|258284|olfactory receptor 114	BC132209|Olfr114|258284|olfactory receptor 114	BC132573|Olfr114|258284|olfactory receptor 114
mm9_v1_chr10_-_4752710_4752812	1.74655	HOX{A6,A7,B6,B7}.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr6_-_129401762_129402017	1.74608	HOX{A6,A7,B6,B7}.p2	AK049608|Clec1a|243653|C-type lectin domain family 1, member a	AK031121|Clec1a|243653|C-type lectin domain family 1, member a	BC052840|Clec1a|243653|C-type lectin domain family 1, member a	AK036846|Clec1a|243653|C-type lectin domain family 1, member a	AK165920|Clec1a|243653|C-type lectin domain family 1, member a	NM_175526|Clec1a|243653|C-type lectin domain family 1, member a
mm9_v1_chr15_-_66761030_66761081	1.74387	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_-_184246785_184246786	1.74249	HOX{A6,A7,B6,B7}.p2	AK028774|Fbxo28|67948|F-box protein 28
mm9_v1_chr5_-_114250360_114250424	1.73922	HOX{A6,A7,B6,B7}.p2	BC025600|Tmem119|231633|transmembrane protein 119	NM_146162|Tmem119|231633|transmembrane protein 119	AK078473|Tmem119|231633|transmembrane protein 119	AK170712|Tmem119|231633|transmembrane protein 119	AK135223|Tmem119|231633|transmembrane protein 119
mm9_v1_chr8_+_96561180_96561211	1.73748	HOX{A6,A7,B6,B7}.p2	AK122532|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK164189|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr1_-_166237342_166237430	1.7324	HOX{A6,A7,B6,B7}.p2	AK005489|Blzf1|66352|basic leucine zipper nuclear factor 1	AK168933|Blzf1|66352|basic leucine zipper nuclear factor 1	BC027025|Blzf1|66352|basic leucine zipper nuclear factor 1	AK171167|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr13_+_89680457_89680462	1.73191	HOX{A6,A7,B6,B7}.p2	AK048107|Hapln1|12950|hyaluronan and proteoglycan link protein 1	AK003582|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr12_+_110693193_110693229	1.73069	HOX{A6,A7,B6,B7}.p2	EU434914|Dlk1|13386|delta-like 1 homolog (Drosophila)	EU434916|Dlk1|13386|delta-like 1 homolog (Drosophila)
mm9_v1_chr10_+_61155793_61155924	1.72643	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_117354829_117354891	1.7263	HOX{A6,A7,B6,B7}.p2	AF438610|Dmap1|66233|DNA methyltransferase 1-associated protein 1	NM_023178|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK012055|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK005270|Dmap1|66233|DNA methyltransferase 1-associated protein 1
mm9_v1_chr2_-_71205805_71205881	1.72557	HOX{A6,A7,B6,B7}.p2	BC024952|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr3_+_89019126_89019154	1.72266	HOX{A6,A7,B6,B7}.p2	L04302|Thbs3|21827|thrombospondin 3	L24434|Thbs3|21827|thrombospondin 3	BC060104|Thbs3|21827|thrombospondin 3	BC053023|Thbs3|21827|thrombospondin 3
mm9_v1_chr5_-_141096711_141096848	1.72089	HOX{A6,A7,B6,B7}.p2	AK019322|Ttyh3|78339|tweety homolog 3 (Drosophila)
mm9_v1_chr10_+_18127443_18127504	1.72043	HOX{A6,A7,B6,B7}.p2	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr2_-_73150559_73150757	1.71919	HOX{A6,A7,B6,B7}.p2	AK006260|Cir1|66935|corepressor interacting with RBPJ, 1	BC061077|Cir1|66935|corepressor interacting with RBPJ, 1	BC094283|Cir1|66935|corepressor interacting with RBPJ, 1	BC089602|Cir1|66935|corepressor interacting with RBPJ, 1	AK008242|Cir1|66935|corepressor interacting with RBPJ, 1	BC099444|Cir1|66935|corepressor interacting with RBPJ, 1	AK131674|Cir1|66935|corepressor interacting with RBPJ, 1	NM_025854|Cir1|66935|corepressor interacting with RBPJ, 1	BC012219|Cir1|66935|corepressor interacting with RBPJ, 1
mm9_v1_chr5_+_104864146_104864160	1.71862	HOX{A6,A7,B6,B7}.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr3_+_94217197_94217322	1.71248	HOX{A6,A7,B6,B7}.p2	BC057030|Tdrkh|72634|tudor and KH domain containing protein	BC031886|Tdrkh|72634|tudor and KH domain containing protein	BC049363|Tdrkh|72634|tudor and KH domain containing protein	NM_028307|Tdrkh|72634|tudor and KH domain containing protein
mm9_v1_chr4_+_101927543_101927649	1.711	HOX{A6,A7,B6,B7}.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr8_+_96561097_96561129	1.70495	HOX{A6,A7,B6,B7}.p2	AK029629|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_001093757|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_177767|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK156765|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr10_+_127799210_127799343	1.70222	HOX{A6,A7,B6,B7}.p2	AK004297|Cs|12974|citrate synthase
mm9_v1_chr15_-_43701569_43701581	1.69613	HOX{A6,A7,B6,B7}.p2	BC076589|Tmem74|239408|transmembrane protein 74	AK046420|Tmem74|239408|transmembrane protein 74	NM_175502|Tmem74|239408|transmembrane protein 74	AK045145|Tmem74|239408|transmembrane protein 74
mm9_v1_chr6_-_54516326_54516404	1.69599	HOX{A6,A7,B6,B7}.p2	BC023889|Scrn1|69938|secernin 1	AK089968|Scrn1|69938|secernin 1	AK129084|Scrn1|69938|secernin 1	AK082953|Scrn1|69938|secernin 1	NM_027268|Scrn1|69938|secernin 1	AK145904|Scrn1|69938|secernin 1	AK050481|Scrn1|69938|secernin 1	AK012765|Scrn1|69938|secernin 1	AK032573|Scrn1|69938|secernin 1
mm9_v1_chr8_+_97190470_97190586	1.692	HOX{A6,A7,B6,B7}.p2	AK150513|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK155242|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	BC024708|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr18_-_70301202_70301243	1.68834	HOX{A6,A7,B6,B7}.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr10_-_53470714_53470714	1.68767	HOX{A6,A7,B6,B7}.p2	AK015334|Fam184a|75906|family with sequence similarity 184, member A	NM_001081428|Fam184a|75906|family with sequence similarity 184, member A
mm9_v1_chr7_-_20284500_20284543	1.68728	HOX{A6,A7,B6,B7}.p2	NM_009696|Apoe|11816|apolipoprotein E
mm9_v1_chr3_+_13471681_13471721	1.68273	HOX{A6,A7,B6,B7}.p2	AK079659|Ralyl|76897|RALY RNA binding protein-like	AK032086|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr3_-_78949796_78949796	1.67374	HOX{A6,A7,B6,B7}.p2	BC067056|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2	NM_001099624|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr11_-_101139357_101139490	1.67258	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_35155621_35155721	1.66997	HOX{A6,A7,B6,B7}.p2	AK147590|Adcy5|224129|adenylate cyclase 5	AK160942|Adcy5|224129|adenylate cyclase 5	NM_001012765|Adcy5|224129|adenylate cyclase 5
mm9_v1_chr10_+_61155390_61155586	1.66648	HOX{A6,A7,B6,B7}.p2	AK003538|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chrX_+_35669345_35669443	1.66509	HOX{A6,A7,B6,B7}.p2	BC137923|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	BC137924|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AK053500|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348324|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348325|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	NM_133690|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr8_+_107951514_107951547	1.66024	HOX{A6,A7,B6,B7}.p2	AK133042|Lrrc36|270091|leucine rich repeat containing 36	NM_001033371|Lrrc36|270091|leucine rich repeat containing 36	NM_001170789|Lrrc36|270091|leucine rich repeat containing 36	BC150957|Lrrc36|270091|leucine rich repeat containing 36	BC172120|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr4_+_73888400_73888400	1.65727	HOX{A6,A7,B6,B7}.p2	BC042424|Kdm4c|76804|lysine (K)-specific demethylase 4C	NM_001172095|Kdm4c|76804|lysine (K)-specific demethylase 4C
mm9_v1_chr11_+_112643501_112643595	1.65512	HOX{A6,A7,B6,B7}.p2	NM_011448|Sox9|20682|SRY-box containing gene 9	AK049986|Sox9|20682|SRY-box containing gene 9	AK030187|Sox9|20682|SRY-box containing gene 9	AK031516|Sox9|20682|SRY-box containing gene 9	BC023796|Sox9|20682|SRY-box containing gene 9	BC023808|Sox9|20682|SRY-box containing gene 9	BC024958|Sox9|20682|SRY-box containing gene 9	BC023953|Sox9|20682|SRY-box containing gene 9	AK220197|Sox9|20682|SRY-box containing gene 9	BC034264|Sox9|20682|SRY-box containing gene 9
mm9_v1_chr17_-_45708739_45708860	1.65504	HOX{A6,A7,B6,B7}.p2	AK177268|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK178129|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK179913|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK180968|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK190429|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196204|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK218770|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr16_-_46010510_46010548	1.65469	HOX{A6,A7,B6,B7}.p2	NM_001134480|Plcxd2|433022|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm9_v1_chr4_+_137798218_137798221	1.65438	HOX{A6,A7,B6,B7}.p2	AK218342|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr14_+_75684171_75684233	1.65398	HOX{A6,A7,B6,B7}.p2	NM_026083|Zc3h13|67302|zinc finger CCCH type containing 13	AK013285|Zc3h13|67302|zinc finger CCCH type containing 13	AK078225|Zc3h13|67302|zinc finger CCCH type containing 13	BC138264|Zc3h13|67302|zinc finger CCCH type containing 13
mm9_v1_chr15_+_36103785_36103843	1.65216	HOX{A6,A7,B6,B7}.p2	AK003023|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK018914|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK008136|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK008287|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	BC028543|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	S63758|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chr16_-_21333381_21333436	1.65167	HOX{A6,A7,B6,B7}.p2	AK018285|Magef1|76222|melanoma antigen family F, 1
mm9_v1_chr9_-_64585461_64585539	1.6502	HOX{A6,A7,B6,B7}.p2	AK031143|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr18_+_77183105_77183189	1.64431	HOX{A6,A7,B6,B7}.p2	NM_001039201|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK147794|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2
mm9_v1_chr8_-_30330079_30330107	1.64382	HOX{A6,A7,B6,B7}.p2	AJ487854|Unc5d|210801|unc-5 homolog D (C. elegans)	NM_153135|Unc5d|210801|unc-5 homolog D (C. elegans)
mm9_v1_chr3_-_122686809_122686855	1.64322	HOX{A6,A7,B6,B7}.p2	AK134835|Usp53|99526|ubiquitin specific peptidase 53
mm9_v1_chr7_-_116760069_116760081	1.64236	HOX{A6,A7,B6,B7}.p2	BC051034|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr10_-_51351236_51351263	1.64112	HOX{A6,A7,B6,B7}.p2	AY735399|Gprc6a|210198|G protein-coupled receptor, family C, group 6, member A	AY735400|Gprc6a|210198|G protein-coupled receptor, family C, group 6, member A	AY735401|Gprc6a|210198|G protein-coupled receptor, family C, group 6, member A	AY101365|Gprc6a|210198|G protein-coupled receptor, family C, group 6, member A	BC108998|Gprc6a|210198|G protein-coupled receptor, family C, group 6, member A	NM_153071|Gprc6a|210198|G protein-coupled receptor, family C, group 6, member A
mm9_v1_chr5_-_122952228_122952237	1.63999	HOX{A6,A7,B6,B7}.p2	NM_001110140|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	NM_009722|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr16_-_37385024_37385045	1.63759	HOX{A6,A7,B6,B7}.p2	AK043658|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114611|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114612|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114613|Stxbp5l|207227|syntaxin binding protein 5-like	NM_172440|Stxbp5l|207227|syntaxin binding protein 5-like
mm9_v1_chr2_-_125657845_125657847	1.63613	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_88125464_88125582	1.63422	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_114622068_114622080	1.63342	HOX{A6,A7,B6,B7}.p2	BC120514|Tph2|216343|tryptophan hydroxylase 2	BC125430|Tph2|216343|tryptophan hydroxylase 2	AY090565|Tph2|216343|tryptophan hydroxylase 2	NM_173391|Tph2|216343|tryptophan hydroxylase 2
mm9_v1_chr2_+_16277963_16277989	1.63278	HOX{A6,A7,B6,B7}.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr2_+_32087125_32087136	1.63113	HOX{A6,A7,B6,B7}.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr15_-_103164744_103164757	1.63028	HOX{A6,A7,B6,B7}.p2	BC017644|Zfp385a|29813|zinc finger protein 385A
mm9_v1_chr3_+_89019108_89019113	1.62951	HOX{A6,A7,B6,B7}.p2	NM_013691|Thbs3|21827|thrombospondin 3
mm9_v1_chr4_+_137476662_137476741	1.62886	HOX{A6,A7,B6,B7}.p2	AK163790|Ece1|230857|endothelin converting enzyme 1
mm9_v1_chr14_-_52899101_52899219	1.62746	HOX{A6,A7,B6,B7}.p2	AK160249|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chrX_+_63906333_63906333	1.62629	HOX{A6,A7,B6,B7}.p2	BC111888|Slitrk2|245450|SLIT and NTRK-like family, member 2	BC112406|Slitrk2|245450|SLIT and NTRK-like family, member 2	NM_198863|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr1_-_164796660_164796743	1.62233	HOX{A6,A7,B6,B7}.p2	BC011229|Fmo1|14261|flavin containing monooxygenase 1	NM_010231|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr5_+_31599923_31600004	1.62141	HOX{A6,A7,B6,B7}.p2	AK149377|Gckr|231103|glucokinase regulatory protein	BC012412|Gckr|231103|glucokinase regulatory protein	NM_144909|Gckr|231103|glucokinase regulatory protein
mm9_v1_chr4_-_132383213_132383408	1.62081	HOX{A6,A7,B6,B7}.p2	AK198369|Ppp1r8|100336|protein phosphatase 1, regulatory (inhibitor) subunit 8
mm9_v1_chr5_+_104183591_104183591	1.62067	HOX{A6,A7,B6,B7}.p2	AK143742|Aff1|17355|AF4/FMR2 family, member 1	NM_001080798|Aff1|17355|AF4/FMR2 family, member 1
mm9_v1_chr11_-_119409041_119409133	1.62039	HOX{A6,A7,B6,B7}.p2	BC139018|Nptx1|18164|neuronal pentraxin 1	BC139020|Nptx1|18164|neuronal pentraxin 1	BC093479|Nptx1|18164|neuronal pentraxin 1	NM_008730|Nptx1|18164|neuronal pentraxin 1
mm9_v1_chr7_+_108570211_108570212	1.61826	HOX{A6,A7,B6,B7}.p2	NM_001008548|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	NM_001143848|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr8_-_28524173_28524415	1.61822	HOX{A6,A7,B6,B7}.p2	AY574265|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AJ245706|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AK149262|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	BC031985|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	NM_021369|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6
mm9_v1_chr7_+_71330344_71330492	1.61668	HOX{A6,A7,B6,B7}.p2	NM_018752|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK164423|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK148275|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK164395|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK148193|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK148094|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	BC082560|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	BC085168|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AF047714|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK185201|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK191453|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK192981|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK195048|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK196151|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK206340|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1	AK148268|Trpm1|17364|transient receptor potential cation channel, subfamily M, member 1
mm9_v1_chr4_-_132848450_132848516	1.61518	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_-_77230519_77230547	1.61248	HOX{A6,A7,B6,B7}.p2	BC083095|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr6_-_51962458_51962567	1.61246	HOX{A6,A7,B6,B7}.p2	AF051324|Skap2|54353|src family associated phosphoprotein 2	AB014485|Skap2|54353|src family associated phosphoprotein 2	AK144289|Skap2|54353|src family associated phosphoprotein 2	AK076000|Skap2|54353|src family associated phosphoprotein 2	AK172297|Skap2|54353|src family associated phosphoprotein 2	BC003711|Skap2|54353|src family associated phosphoprotein 2	NM_018773|Skap2|54353|src family associated phosphoprotein 2
mm9_v1_chr18_-_43532846_43532925	1.61158	HOX{A6,A7,B6,B7}.p2	AK161509|Dpysl3|22240|dihydropyrimidinase-like 3	AK077000|Dpysl3|22240|dihydropyrimidinase-like 3	AK133040|Dpysl3|22240|dihydropyrimidinase-like 3	NM_001136086|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr5_+_111846284_111846381	1.61101	HOX{A6,A7,B6,B7}.p2	AK142207|Mn1|433938|meningioma 1
mm9_v1_chr7_-_11242322_11242322	1.61011	HOX{A6,A7,B6,B7}.p2	NM_001110020|Gm6900|628596|predicted gene 6900
mm9_v1_chr8_+_94190341_94190551	1.6077	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_-_25078049_25078090	1.60474	HOX{A6,A7,B6,B7}.p2	AK194925|Tubb2c|227613|tubulin, beta 2C	AK214079|Tubb2c|227613|tubulin, beta 2C
mm9_v1_chr9_+_118949880_118949887	1.6014	HOX{A6,A7,B6,B7}.p2	AK138484|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AK171161|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm9_v1_chr17_+_26792701_26792940	1.59905	HOX{A6,A7,B6,B7}.p2	AK177289|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK191970|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK204835|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr6_+_113433507_113433615	1.59898	HOX{A6,A7,B6,B7}.p2	BC029065|Creld1|171508|cysteine-rich with EGF-like domains 1	AK155777|Creld1|171508|cysteine-rich with EGF-like domains 1	AB009020|Creld1|171508|cysteine-rich with EGF-like domains 1	BC010804|Creld1|171508|cysteine-rich with EGF-like domains 1	BC023893|Creld1|171508|cysteine-rich with EGF-like domains 1	NM_133930|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr5_+_43907004_43907024	1.59848	HOX{A6,A7,B6,B7}.p2	AK078818|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr1_-_36756687_36756877	1.59785	HOX{A6,A7,B6,B7}.p2	AK010077|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
mm9_v1_chr14_+_56291071_56291136	1.59662	HOX{A6,A7,B6,B7}.p2	NM_177992|Gmpr2|105446|guanosine monophosphate reductase 2	AK031004|Gmpr2|105446|guanosine monophosphate reductase 2	AK163048|Gmpr2|105446|guanosine monophosphate reductase 2	AK075772|Gmpr2|105446|guanosine monophosphate reductase 2	BC024109|Gmpr2|105446|guanosine monophosphate reductase 2	BC003886|Gmpr2|105446|guanosine monophosphate reductase 2
mm9_v1_chr13_-_113836558_113836639	1.59544	HOX{A6,A7,B6,B7}.p2	BC019664|Gpx8|69590|glutathione peroxidase 8 (putative)	AK009378|Gpx8|69590|glutathione peroxidase 8 (putative)	NM_027127|Gpx8|69590|glutathione peroxidase 8 (putative)
mm9_v1_chr1_-_164796609_164796656	1.58739	HOX{A6,A7,B6,B7}.p2	U87456|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr15_+_102820969_102821018	1.5829	HOX{A6,A7,B6,B7}.p2	NM_010466|Hoxc8|15426|homeobox C8	X07439|Hoxc8|15426|homeobox C8
mm9_v1_chr12_-_82633781_82633909	1.58266	HOX{A6,A7,B6,B7}.p2	AY138960|Synj2bp|24071|synaptojanin 2 binding protein	BC027433|Synj2bp|24071|synaptojanin 2 binding protein	AK013474|Synj2bp|24071|synaptojanin 2 binding protein	AK163362|Synj2bp|24071|synaptojanin 2 binding protein	AK008254|Synj2bp|24071|synaptojanin 2 binding protein	AY566156|Synj2bp|24071|synaptojanin 2 binding protein	AK008054|Synj2bp|24071|synaptojanin 2 binding protein	AK078422|Synj2bp|24071|synaptojanin 2 binding protein	AK030379|Synj2bp|24071|synaptojanin 2 binding protein	AK033514|Synj2bp|24071|synaptojanin 2 binding protein	NM_025292|Synj2bp|24071|synaptojanin 2 binding protein
mm9_v1_chr11_-_3245718_3245858	1.5776	HOX{A6,A7,B6,B7}.p2	AK038530|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr15_-_93167238_93167272	1.5766	HOX{A6,A7,B6,B7}.p2	BC002192|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr8_+_63134353_63134353	1.57582	HOX{A6,A7,B6,B7}.p2	AK016959|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_001177882|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr8_-_48374715_48374736	1.57433	HOX{A6,A7,B6,B7}.p2	AK129346|Stox2|71069|storkhead box 2
mm9_v1_chr1_-_45460310_45460349	1.57365	HOX{A6,A7,B6,B7}.p2	BC043696|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr9_+_72286335_72286422	1.5717	HOX{A6,A7,B6,B7}.p2	NM_008613|Mns1|17427|meiosis-specific nuclear structural protein 1	AK132772|Mns1|17427|meiosis-specific nuclear structural protein 1	AK013048|Mns1|17427|meiosis-specific nuclear structural protein 1	BC046624|Mns1|17427|meiosis-specific nuclear structural protein 1
mm9_v1_chr6_-_115201790_115201797	1.57115	HOX{A6,A7,B6,B7}.p2	AF282730|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr9_+_107950264_107950349	1.56889	HOX{A6,A7,B6,B7}.p2	AK180972|Ip6k1|27399|inositol hexaphosphate kinase 1	AK192812|Ip6k1|27399|inositol hexaphosphate kinase 1	AK193720|Ip6k1|27399|inositol hexaphosphate kinase 1	AK196386|Ip6k1|27399|inositol hexaphosphate kinase 1	AK198963|Ip6k1|27399|inositol hexaphosphate kinase 1	AK200277|Ip6k1|27399|inositol hexaphosphate kinase 1	AK213940|Ip6k1|27399|inositol hexaphosphate kinase 1	BC069990|Ip6k1|27399|inositol hexaphosphate kinase 1	BC039929|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr12_-_110131406_110131420	1.56454	HOX{A6,A7,B6,B7}.p2	BC003450|Wars|22375|tryptophanyl-tRNA synthetase	AK004541|Wars|22375|tryptophanyl-tRNA synthetase	NM_001164488|Wars|22375|tryptophanyl-tRNA synthetase	NM_011710|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr8_+_12915892_12915957	1.55831	HOX{A6,A7,B6,B7}.p2	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr10_-_60227439_60227519	1.55383	HOX{A6,A7,B6,B7}.p2	AK084569|Unc5b|107449|unc-5 homolog B (C. elegans)	AK041547|Unc5b|107449|unc-5 homolog B (C. elegans)	AK159205|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr19_+_8907691_8907773	1.55278	HOX{A6,A7,B6,B7}.p2	AK004010|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr16_-_38525341_38525620	1.5471	HOX{A6,A7,B6,B7}.p2	AK076379|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr6_-_40985505_40985509	1.54618	HOX{A6,A7,B6,B7}.p2	AK007773|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene	AK008695|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene	AK008460|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene	NM_023333|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene	BC061093|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene
mm9_v1_chr5_+_136282748_136282767	1.5455	HOX{A6,A7,B6,B7}.p2	AB041661|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr9_+_32503600_32503674	1.54295	HOX{A6,A7,B6,B7}.p2	NM_001038642|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	NM_011808|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	BC010588|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	AK168247|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain
mm9_v1_chr7_-_20284370_20284493	1.54201	HOX{A6,A7,B6,B7}.p2	BC083351|Apoe|11816|apolipoprotein E	BC044785|Apoe|11816|apolipoprotein E	AK149568|Apoe|11816|apolipoprotein E	BC028816|Apoe|11816|apolipoprotein E	AK010261|Apoe|11816|apolipoprotein E	AK075843|Apoe|11816|apolipoprotein E	AK131624|Apoe|11816|apolipoprotein E	AK134921|Apoe|11816|apolipoprotein E	AK148747|Apoe|11816|apolipoprotein E	AK149111|Apoe|11816|apolipoprotein E	AK159105|Apoe|11816|apolipoprotein E	AK159517|Apoe|11816|apolipoprotein E	AK150834|Apoe|11816|apolipoprotein E	AK159424|Apoe|11816|apolipoprotein E
mm9_v1_chr19_-_29095519_29095616	1.53779	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_98603186_98603266	1.53741	HOX{A6,A7,B6,B7}.p2	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr12_-_102988893_102988980	1.53437	HOX{A6,A7,B6,B7}.p2	AK192839|Fbln5|23876|fibulin 5	AK207450|Fbln5|23876|fibulin 5	AK207544|Fbln5|23876|fibulin 5
mm9_v1_chr14_+_52513284_52513333	1.53184	HOX{A6,A7,B6,B7}.p2	NM_001039676|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2	BC113769|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2	AK170178|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2	AK089322|Slc39a2|214922|solute carrier family 39 (zinc transporter), member 2
mm9_v1_chr4_-_82698070_82698070	1.5314	HOX{A6,A7,B6,B7}.p2	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr17_+_70318707_70318748	1.52989	HOX{A6,A7,B6,B7}.p2	AK031404|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK043418|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK043683|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK031410|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK035763|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr19_-_4785312_4785318	1.52906	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_-_115152128_115152185	1.52897	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_22439642_22439745	1.52775	HOX{A6,A7,B6,B7}.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr7_+_108570222_108570257	1.52535	HOX{A6,A7,B6,B7}.p2	BC086800|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr1_+_148344816_148344867	1.52424	HOX{A6,A7,B6,B7}.p2	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr8_+_124254462_124254503	1.52281	HOX{A6,A7,B6,B7}.p2	AB024449|Jph3|57340|junctophilin 3	NM_020605|Jph3|57340|junctophilin 3	AK046136|Jph3|57340|junctophilin 3	AK082880|Jph3|57340|junctophilin 3	AK045706|Jph3|57340|junctophilin 3	BC103682|Jph3|57340|junctophilin 3	BC104736|Jph3|57340|junctophilin 3	BC105307|Jph3|57340|junctophilin 3
mm9_v1_chr6_-_128476708_128476738	1.52054	HOX{A6,A7,B6,B7}.p2	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr15_-_64753721_64753861	1.51646	HOX{A6,A7,B6,B7}.p2	U85021|Adcy8|11514|adenylate cyclase 8	BC094231|Adcy8|11514|adenylate cyclase 8	AK163443|Adcy8|11514|adenylate cyclase 8	AK138244|Adcy8|11514|adenylate cyclase 8	NM_009623|Adcy8|11514|adenylate cyclase 8
mm9_v1_chr11_-_23670766_23670992	1.51526	HOX{A6,A7,B6,B7}.p2	AK031627|Rel|19696|reticuloendotheliosis oncogene	BC139447|Rel|19696|reticuloendotheliosis oncogene	BC139448|Rel|19696|reticuloendotheliosis oncogene	BC139770|Rel|19696|reticuloendotheliosis oncogene	NM_009044|Rel|19696|reticuloendotheliosis oncogene	X60271|Rel|19696|reticuloendotheliosis oncogene
mm9_v1_chr6_-_91757386_91757427	1.51249	HOX{A6,A7,B6,B7}.p2	NM_001159507|Grip2|243547|glutamate receptor interacting protein 2
mm9_v1_chr7_+_119571219_119571592	1.51138	HOX{A6,A7,B6,B7}.p2	BC059236|Parva|57342|parvin, alpha	NM_020606|Parva|57342|parvin, alpha	AB045321|Parva|57342|parvin, alpha	AF237774|Parva|57342|parvin, alpha	AK162796|Parva|57342|parvin, alpha	AK076473|Parva|57342|parvin, alpha	AF264766|Parva|57342|parvin, alpha	BC039750|Parva|57342|parvin, alpha
mm9_v1_chr19_+_39005433_39005482	1.51093	HOX{A6,A7,B6,B7}.p2	BC090671|Hells|15201|helicase, lymphoid specific	AK013266|Hells|15201|helicase, lymphoid specific	U25691|Hells|15201|helicase, lymphoid specific	AK147126|Hells|15201|helicase, lymphoid specific	AF155210|Hells|15201|helicase, lymphoid specific	NM_008234|Hells|15201|helicase, lymphoid specific	AK166636|Hells|15201|helicase, lymphoid specific	BC100394|Hells|15201|helicase, lymphoid specific
mm9_v1_chr11_+_98725073_98725122	1.50814	HOX{A6,A7,B6,B7}.p2	BC057854|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr9_+_59526881_59526990	1.50745	HOX{A6,A7,B6,B7}.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr5_+_34974750_34974884	1.5059	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_+_22966203_22966220	1.50413	HOX{A6,A7,B6,B7}.p2	AK082311|Cdh18|320865|cadherin 18	AK137430|Cdh18|320865|cadherin 18	NM_001081299|Cdh18|320865|cadherin 18
mm9_v1_chr9_-_89599660_89599893	1.49726	HOX{A6,A7,B6,B7}.p2	BC023338|Tmed3|66111|transmembrane emp24 domain containing 3	AK007544|Tmed3|66111|transmembrane emp24 domain containing 3	AK002698|Tmed3|66111|transmembrane emp24 domain containing 3	AK004545|Tmed3|66111|transmembrane emp24 domain containing 3	NM_025360|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr10_-_7357774_7357973	1.49302	HOX{A6,A7,B6,B7}.p2	AK179354|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	S72473|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm9_v1_chr11_-_53083217_53083336	1.49159	HOX{A6,A7,B6,B7}.p2	AK180907|Hspa4|15525|heat shock protein 4	AK148883|Hspa4|15525|heat shock protein 4
mm9_v1_chrX_-_141884479_141884623	1.48862	HOX{A6,A7,B6,B7}.p2	AK053987|Amot|27494|angiomotin
mm9_v1_chr8_+_119873069_119873069	1.48773	HOX{A6,A7,B6,B7}.p2	AK016712|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene	NM_028941|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr15_-_103197178_103197295	1.48357	HOX{A6,A7,B6,B7}.p2	BC053431|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	NM_010577|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	BC050943|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	BC059829|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)
mm9_v1_chrX_+_93650774_93650774	1.48102	HOX{A6,A7,B6,B7}.p2	NM_001159628|Heph|15203|hephaestin	NM_010417|Heph|15203|hephaestin
mm9_v1_chr19_+_17030600_17030608	1.47844	HOX{A6,A7,B6,B7}.p2	AK165582|Prune2|353211|prune homolog 2 (Drosophila)	AK020727|Prune2|353211|prune homolog 2 (Drosophila)	AK039241|Prune2|353211|prune homolog 2 (Drosophila)	AK165913|Prune2|353211|prune homolog 2 (Drosophila)	NM_181348|Prune2|353211|prune homolog 2 (Drosophila)
mm9_v1_chr6_+_124780193_124780220	1.47474	HOX{A6,A7,B6,B7}.p2	NM_013538|Cdca3|14793|cell division cycle associated 3	AK011313|Cdca3|14793|cell division cycle associated 3
mm9_v1_chr14_-_104242892_104242969	1.4743	HOX{A6,A7,B6,B7}.p2	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr5_+_21292545_21292623	1.47411	HOX{A6,A7,B6,B7}.p2	U61283|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	BC005462|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK153413|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK168548|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK146919|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK005083|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm9_v1_chr7_-_30691111_30691122	1.47091	HOX{A6,A7,B6,B7}.p2	AK147732|Zfp27|22689|zinc finger protein 27	NM_001037707|Zfp27|22689|zinc finger protein 27	NM_011754|Zfp27|22689|zinc finger protein 27
mm9_v1_chr1_-_173957316_173957398	1.46482	HOX{A6,A7,B6,B7}.p2	AK033128|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	AY035370|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	AK129311|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	BC052195|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	NM_033509|Vangl2|93840|vang-like 2 (van gogh, Drosophila)
mm9_v1_chr7_+_5031809_5032021	1.46184	HOX{A6,A7,B6,B7}.p2	AK155033|Epn1|13854|epsin 1	BC067206|Epn1|13854|epsin 1	BC099682|Epn1|13854|epsin 1	NM_010147|Epn1|13854|epsin 1
mm9_v1_chr5_+_115224911_115225148	1.45702	HOX{A6,A7,B6,B7}.p2	AK039432|Ankrd13a|68420|ankyrin repeat domain 13a	AK156539|Ankrd13a|68420|ankyrin repeat domain 13a	BC049187|Ankrd13a|68420|ankyrin repeat domain 13a	BC061692|Ankrd13a|68420|ankyrin repeat domain 13a	NM_026718|Ankrd13a|68420|ankyrin repeat domain 13a
mm9_v1_chr1_-_82287990_82288082	1.45567	HOX{A6,A7,B6,B7}.p2	AK045317|Irs1|16367|insulin receptor substrate 1	NM_010570|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr16_-_19883985_19883989	1.45555	HOX{A6,A7,B6,B7}.p2	AK020802|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr16_+_23107538_23107551	1.45089	HOX{A6,A7,B6,B7}.p2	NM_001123037|Eif4a2|13682|eukaryotic translation initiation factor 4A2	NM_001123038|Eif4a2|13682|eukaryotic translation initiation factor 4A2	NM_013506|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr17_-_15512773_15512786	1.44872	HOX{A6,A7,B6,B7}.p2	NM_007865|Dll1|13388|delta-like 1 (Drosophila)
mm9_v1_chr5_-_134714418_134714419	1.4482	HOX{A6,A7,B6,B7}.p2	AK198068|Gtf2i|14886|general transcription factor II I
mm9_v1_chr9_+_4383536_4383536	1.44604	HOX{A6,A7,B6,B7}.p2	AK180204|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	BC014729|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	NM_145609|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene
mm9_v1_chr3_+_130320365_130320530	1.44402	HOX{A6,A7,B6,B7}.p2	AK049937|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	NM_001163587|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	AK030395|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	AK005060|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	NM_027907|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	BC043680|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	BC022644|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1	BC058592|Agxt2l1|71760|alanine-glyoxylate aminotransferase 2-like 1
mm9_v1_chr16_-_98169926_98169967	1.44178	HOX{A6,A7,B6,B7}.p2	AK017406|Zfp295|114565|zinc finger protein 295	AK084920|Zfp295|114565|zinc finger protein 295
mm9_v1_chr14_-_37690597_37690679	1.44161	HOX{A6,A7,B6,B7}.p2	AK084686|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr8_+_125365477_125365497	1.43812	HOX{A6,A7,B6,B7}.p2	NM_001100618|Gm16378|100043225|predicted gene 16378
mm9_v1_chr1_+_74438416_74438473	1.43778	HOX{A6,A7,B6,B7}.p2	AK167390|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC065158|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC079638|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr15_+_81767370_81767389	1.43772	HOX{A6,A7,B6,B7}.p2	BC016109|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr9_-_44495469_44495477	1.43564	HOX{A6,A7,B6,B7}.p2	BC025451|Phldb1|102693|pleckstrin homology-like domain, family B, member 1
mm9_v1_chr10_+_96945972_96946140	1.43468	HOX{A6,A7,B6,B7}.p2	BC060126|Dcn|13179|decorin	Y11757|Dcn|13179|decorin
mm9_v1_chr2_-_110203264_110203281	1.43066	HOX{A6,A7,B6,B7}.p2	AK159648|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr11_-_51807636_51807676	1.42979	HOX{A6,A7,B6,B7}.p2	AK017280|5430406J06Rik|73848|RIKEN cDNA 5430406J06 gene
mm9_v1_chr3_+_159262144_159262196	1.42912	HOX{A6,A7,B6,B7}.p2	NM_029987|Rpe65|19892|retinal pigment epithelium 65	AK020906|Rpe65|19892|retinal pigment epithelium 65	BC090656|Rpe65|19892|retinal pigment epithelium 65	BC130028|Rpe65|19892|retinal pigment epithelium 65	AF410461|Rpe65|19892|retinal pigment epithelium 65
mm9_v1_chr6_-_119146426_119146446	1.428	HOX{A6,A7,B6,B7}.p2	AK052162|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_009781|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr5_-_92792262_92792321	1.42773	HOX{A6,A7,B6,B7}.p2	AK040051|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	BC025903|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF136449|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF178672|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF179872|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	NM_019494|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AK020750|Cxcl11|56066|chemokine (C-X-C motif) ligand 11
mm9_v1_chr18_+_35776026_35776084	1.42519	HOX{A6,A7,B6,B7}.p2	AK012839|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr6_-_87931475_87931614	1.42463	HOX{A6,A7,B6,B7}.p2	BC048709|H1fx|243529|H1 histone family, member X	NM_198622|H1fx|243529|H1 histone family, member X
mm9_v1_chr7_-_35437859_35437910	1.42184	HOX{A6,A7,B6,B7}.p2	BC031749|Kctd15|233107|potassium channel tetramerisation domain containing 15	NM_146188|Kctd15|233107|potassium channel tetramerisation domain containing 15
mm9_v1_chr11_-_69418965_69419018	1.42114	HOX{A6,A7,B6,B7}.p2	X16645|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide
mm9_v1_chr3_+_121656136_121656252	1.41656	HOX{A6,A7,B6,B7}.p2	BC040387|Arhgap29|214137|Rho GTPase activating protein 29	NM_172525|Arhgap29|214137|Rho GTPase activating protein 29
mm9_v1_chr4_+_118241644_118241647	1.41519	HOX{A6,A7,B6,B7}.p2	AK021161|Wdr65|68625|WD repeat domain 65
mm9_v1_chr5_-_107003702_107003736	1.41429	HOX{A6,A7,B6,B7}.p2	AK087483|Gm8350|666892|predicted gene 8350
mm9_v1_chr13_-_98669545_98669547	1.41402	HOX{A6,A7,B6,B7}.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr5_-_123183537_123183571	1.41369	HOX{A6,A7,B6,B7}.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr1_-_158404299_158404465	1.40611	HOX{A6,A7,B6,B7}.p2	AK213760|Soat1|20652|sterol O-acyltransferase 1	AK054149|Soat1|20652|sterol O-acyltransferase 1	AK142486|Soat1|20652|sterol O-acyltransferase 1	DQ903181|Soat1|20652|sterol O-acyltransferase 1	S81092|Soat1|20652|sterol O-acyltransferase 1	AK159393|Soat1|20652|sterol O-acyltransferase 1	AK159529|Soat1|20652|sterol O-acyltransferase 1	AK160017|Soat1|20652|sterol O-acyltransferase 1	NM_009230|Soat1|20652|sterol O-acyltransferase 1
mm9_v1_chr13_-_46060325_46060353	1.40341	HOX{A6,A7,B6,B7}.p2	BC058178|Atxn1|20238|ataxin 1	AK048268|Atxn1|20238|ataxin 1	NM_009124|Atxn1|20238|ataxin 1	AK169931|Atxn1|20238|ataxin 1
mm9_v1_chr1_+_9838330_9838477	1.40094	HOX{A6,A7,B6,B7}.p2	AK030314|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_001037759|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166531|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK146561|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031328|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171959|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr2_-_71205587_71205679	1.40047	HOX{A6,A7,B6,B7}.p2	BC013845|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC060505|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK019150|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK083156|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_172436|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK147948|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK030595|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK144958|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK208043|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr12_-_66174913_66174972	1.39982	HOX{A6,A7,B6,B7}.p2	AF110812|Fkbp3|30795|FK506 binding protein 3	AK012346|Fkbp3|30795|FK506 binding protein 3	NM_013902|Fkbp3|30795|FK506 binding protein 3	AF135595|Fkbp3|30795|FK506 binding protein 3	AK168641|Fkbp3|30795|FK506 binding protein 3	BC002122|Fkbp3|30795|FK506 binding protein 3	AK145648|Fkbp3|30795|FK506 binding protein 3	AK150802|Fkbp3|30795|FK506 binding protein 3
mm9_v1_chr18_+_30432499_30432592	1.39395	HOX{A6,A7,B6,B7}.p2	AK030578|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC024675|Pik3c3|225326|phosphoinositide-3-kinase, class 3	NM_181414|Pik3c3|225326|phosphoinositide-3-kinase, class 3	AK044997|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC057678|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC027029|Pik3c3|225326|phosphoinositide-3-kinase, class 3
mm9_v1_chr17_+_80706746_80706746	1.39392	HOX{A6,A7,B6,B7}.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr2_+_125860377_125860409	1.39187	HOX{A6,A7,B6,B7}.p2	AK037172|Fgf7|14178|fibroblast growth factor 7	NM_008008|Fgf7|14178|fibroblast growth factor 7
mm9_v1_chr16_+_62854129_62854197	1.3911	HOX{A6,A7,B6,B7}.p2	AK163032|Pros1|19128|protein S (alpha)	AK145501|Pros1|19128|protein S (alpha)	NM_011173|Pros1|19128|protein S (alpha)	Z25469|Pros1|19128|protein S (alpha)	BC128316|Pros1|19128|protein S (alpha)
mm9_v1_chr8_-_122159431_122159579	1.38937	HOX{A6,A7,B6,B7}.p2	BC043936|Kcng4|66733|potassium voltage-gated channel, subfamily G, member 4	NM_025734|Kcng4|66733|potassium voltage-gated channel, subfamily G, member 4
mm9_v1_chr6_+_4490515_4490528	1.38878	HOX{A6,A7,B6,B7}.p2	AK003150|Col1a2|12843|collagen, type I, alpha 2	BC023203|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr6_-_122692526_122692557	1.38577	HOX{A6,A7,B6,B7}.p2	AK164286|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK028041|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK045328|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK147258|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr14_+_120674939_120674954	1.37991	HOX{A6,A7,B6,B7}.p2	BC079898|Mbnl2|105559|muscleblind-like 2	BC023895|Mbnl2|105559|muscleblind-like 2	AK148740|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr11_-_70272909_70273172	1.37765	HOX{A6,A7,B6,B7}.p2	AK030515|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	AF277001|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	GQ380016|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	GQ380017|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	AF301017|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	AK009599|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	AK003085|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	AK150224|Cxcl16|66102|chemokine (C-X-C motif) ligand 16
mm9_v1_chr3_-_75073981_75073999	1.37629	HOX{A6,A7,B6,B7}.p2	AF251276|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	AK007347|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	AK008931|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	NM_026460|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2
mm9_v1_chr9_+_107950526_107950735	1.37629	HOX{A6,A7,B6,B7}.p2	AK214785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr2_+_21289168_21289199	1.37311	HOX{A6,A7,B6,B7}.p2	AK083234|Gpr158|241263|G protein-coupled receptor 158	AK086256|Gpr158|241263|G protein-coupled receptor 158	NM_001004761|Gpr158|241263|G protein-coupled receptor 158	AK030530|Gpr158|241263|G protein-coupled receptor 158
mm9_v1_chr19_-_40588255_40588287	1.37237	HOX{A6,A7,B6,B7}.p2	AK166943|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr14_+_99697933_99698067	1.3682	HOX{A6,A7,B6,B7}.p2	AB025099|Klf5|12224|Kruppel-like factor 5	AF079852|Klf5|12224|Kruppel-like factor 5	AK087066|Klf5|12224|Kruppel-like factor 5
mm9_v1_chrX_-_133275693_133275798	1.36819	HOX{A6,A7,B6,B7}.p2	NM_001168225|Morf4l2|56397|mortality factor 4 like 2	AK183992|Morf4l2|56397|mortality factor 4 like 2	AK129038|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr2_+_55289530_55289587	1.36665	HOX{A6,A7,B6,B7}.p2	AK046778|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	D45022|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	NM_008426|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103671|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103673|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103674|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103672|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3
mm9_v1_chr5_+_38651466_38651637	1.36647	HOX{A6,A7,B6,B7}.p2	BC025197|Tmem128|66309|transmembrane protein 128	AK012789|Tmem128|66309|transmembrane protein 128	AK013227|Tmem128|66309|transmembrane protein 128	AK080853|Tmem128|66309|transmembrane protein 128	NM_025480|Tmem128|66309|transmembrane protein 128	AK162257|Tmem128|66309|transmembrane protein 128	AK076679|Tmem128|66309|transmembrane protein 128	BC060969|Tmem128|66309|transmembrane protein 128	BC110310|Tmem128|66309|transmembrane protein 128
mm9_v1_chr16_-_19883999_19884017	1.36548	HOX{A6,A7,B6,B7}.p2	AK020919|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr5_-_77544147_77544201	1.36206	HOX{A6,A7,B6,B7}.p2	AF492703|Hopx|74318|HOP homeobox	NM_175606|Hopx|74318|HOP homeobox	AF534182|Hopx|74318|HOP homeobox
mm9_v1_chr11_+_29642667_29642710	1.36184	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_90612275_90612375	1.35673	HOX{A6,A7,B6,B7}.p2	AK044711|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr13_-_76081343_76081394	1.35347	HOX{A6,A7,B6,B7}.p2	AK081381|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr14_+_30822097_30822350	1.35081	HOX{A6,A7,B6,B7}.p2	NM_001136240|Chdh|218865|choline dehydrogenase	AK052715|Chdh|218865|choline dehydrogenase	AK087570|Chdh|218865|choline dehydrogenase	AK164042|Chdh|218865|choline dehydrogenase
mm9_v1_chr1_+_59821480_59821480	1.35019	HOX{A6,A7,B6,B7}.p2	NM_007561|Bmpr2|12168|bone morphogenic protein receptor, type II (serine/threonine kinase)	U78048|Bmpr2|12168|bone morphogenic protein receptor, type II (serine/threonine kinase)
mm9_v1_chr7_+_112702873_112703308	1.35006	HOX{A6,A7,B6,B7}.p2	AK145702|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	NM_011421|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK148189|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK088147|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK145534|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK149579|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK164167|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	Z14252|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	BC011304|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK138133|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	BC034515|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK167802|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK164717|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK191535|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK189506|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK194268|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK197635|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK200654|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK203746|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal
mm9_v1_chr1_-_60154721_60154750	1.34701	HOX{A6,A7,B6,B7}.p2	BC052386|Wdr12|57750|WD repeat domain 12	NM_021312|Wdr12|57750|WD repeat domain 12
mm9_v1_chr17_-_49703661_49703689	1.34044	HOX{A6,A7,B6,B7}.p2	BC050043|Daam2|76441|dishevelled associated activator of morphogenesis 2	NM_001008231|Daam2|76441|dishevelled associated activator of morphogenesis 2	AY426536|Daam2|76441|dishevelled associated activator of morphogenesis 2
mm9_v1_chr11_+_97311458_97311517	1.33951	HOX{A6,A7,B6,B7}.p2	NM_021493|Arhgap23|58996|Rho GTPase activating protein 23
mm9_v1_chr10_-_36855668_36856157	1.33812	HOX{A6,A7,B6,B7}.p2	AK151646|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK153217|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr15_-_73640331_73640366	1.33675	HOX{A6,A7,B6,B7}.p2	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr3_-_126865259_126865312	1.33651	HOX{A6,A7,B6,B7}.p2	AK083111|Ank2|109676|ankyrin 2, brain
mm9_v1_chr10_+_96944961_96945010	1.33415	HOX{A6,A7,B6,B7}.p2	NM_007833|Dcn|13179|decorin	AK147020|Dcn|13179|decorin
mm9_v1_chr5_+_34339351_34339354	1.32513	HOX{A6,A7,B6,B7}.p2	AK147594|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr17_+_45570766_45570813	1.32506	HOX{A6,A7,B6,B7}.p2	AK045689|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK046225|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK083460|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK171144|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK162357|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK140548|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene
mm9_v1_chr5_-_137918291_137918291	1.32487	HOX{A6,A7,B6,B7}.p2	NM_011741|Zan|22635|zonadhesin	U97068|Zan|22635|zonadhesin
mm9_v1_chr10_-_128356215_128356352	1.32031	HOX{A6,A7,B6,B7}.p2	AF013288|Rdh5|19682|retinol dehydrogenase 5	BC021372|Rdh5|19682|retinol dehydrogenase 5	AF033196|Rdh5|19682|retinol dehydrogenase 5	AK033063|Rdh5|19682|retinol dehydrogenase 5	AK135139|Rdh5|19682|retinol dehydrogenase 5	NM_134006|Rdh5|19682|retinol dehydrogenase 5
mm9_v1_chr1_+_129999868_129999934	1.31739	HOX{A6,A7,B6,B7}.p2	AK144098|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	NM_181750|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK141150|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	BC049181|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK051765|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)
mm9_v1_chr9_-_85642829_85642930	1.31623	HOX{A6,A7,B6,B7}.p2	BC137798|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK030895|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	BC060722|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK136872|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK037129|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase	AK050176|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr1_+_92509306_92509321	1.30942	HOX{A6,A7,B6,B7}.p2	AK185916|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK207412|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK215258|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK212344|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK218596|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK214410|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm9_v1_chr7_+_120909509_120909519	1.30918	HOX{A6,A7,B6,B7}.p2	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr5_-_66395512_66395578	1.30867	HOX{A6,A7,B6,B7}.p2	BC096478|9130230L23Rik|231253|RIKEN cDNA 9130230L23 gene	AK033717|9130230L23Rik|231253|RIKEN cDNA 9130230L23 gene
mm9_v1_chr17_-_30729995_30730086	1.30855	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_13273025_13273117	1.30785	HOX{A6,A7,B6,B7}.p2	AK021291|Adat2|66757|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
mm9_v1_chr18_+_37467108_37467135	1.30736	HOX{A6,A7,B6,B7}.p2	AK036169|Pcdhb4|93875|protocadherin beta 4	AK143280|Pcdhb4|93875|protocadherin beta 4	AK160730|Pcdhb4|93875|protocadherin beta 4	NM_053129|Pcdhb4|93875|protocadherin beta 4	AK029277|Pcdhb4|93875|protocadherin beta 4	BC053098|Pcdhb4|93875|protocadherin beta 4
mm9_v1_chr1_-_152011986_152012077	1.30498	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr2_+_16277924_16277950	1.30294	HOX{A6,A7,B6,B7}.p2	AK035165|Plxdc2|67448|plexin domain containing 2	AK004640|Plxdc2|67448|plexin domain containing 2	NM_026162|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr1_+_173275837_173275844	1.30234	HOX{A6,A7,B6,B7}.p2	Y17393|Pfdn2|18637|prefoldin 2	BC026839|Pfdn2|18637|prefoldin 2
mm9_v1_chr1_-_194681914_194681945	1.30117	HOX{A6,A7,B6,B7}.p2	BC060251|Sertad4|214791|SERTA domain containing 4	NM_198247|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr9_+_107948285_107948372	1.30015	HOX{A6,A7,B6,B7}.p2	AK208685|Ip6k1|27399|inositol hexaphosphate kinase 1	AK211834|Ip6k1|27399|inositol hexaphosphate kinase 1	AK191619|Ip6k1|27399|inositol hexaphosphate kinase 1	AK215657|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr13_-_76081244_76081314	1.29851	HOX{A6,A7,B6,B7}.p2	BC005664|Rhobtb3|73296|Rho-related BTB domain containing 3	BC050836|Rhobtb3|73296|Rho-related BTB domain containing 3	NM_028493|Rhobtb3|73296|Rho-related BTB domain containing 3	AK129234|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr19_-_36194284_36194373	1.2981	HOX{A6,A7,B6,B7}.p2	AF041847|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	BC037138|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK009655|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK146471|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK146940|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK009959|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK146627|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	NM_013468|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK145944|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)
mm9_v1_chr10_-_38853662_38853700	1.29535	HOX{A6,A7,B6,B7}.p2	BC094255|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	AK006431|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	AK006353|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	NM_183254|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene
mm9_v1_chr12_+_77938392_77938461	1.29263	HOX{A6,A7,B6,B7}.p2	AK008228|Fntb|110606|farnesyltransferase, CAAX box, beta	AK089911|Fntb|110606|farnesyltransferase, CAAX box, beta	BC031417|Fntb|110606|farnesyltransferase, CAAX box, beta	NM_145927|Fntb|110606|farnesyltransferase, CAAX box, beta
mm9_v1_chr18_+_24796993_24796998	1.29138	HOX{A6,A7,B6,B7}.p2	AK213520|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)
mm9_v1_chr5_-_53499398_53499436	1.29089	HOX{A6,A7,B6,B7}.p2	AK009811|Sel1l3|231238|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm9_v1_chr14_-_73725576_73725603	1.28745	HOX{A6,A7,B6,B7}.p2	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr6_-_35258102_35258131	1.28707	HOX{A6,A7,B6,B7}.p2	BC089161|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK036354|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	NM_172892|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK038937|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK139428|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4
mm9_v1_chr17_+_23810567_23810574	1.28674	HOX{A6,A7,B6,B7}.p2	AK013438|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)	NM_181821|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)
mm9_v1_chr2_+_124436031_124436031	1.2864	HOX{A6,A7,B6,B7}.p2	AB091532|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_172537|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199238|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199239|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199240|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_199241|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr3_+_66789859_66789903	1.28617	HOX{A6,A7,B6,B7}.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr13_+_23776066_23776084	1.28616	HOX{A6,A7,B6,B7}.p2	AK011516|Hist1h2bc|68024|histone cluster 1, H2bc	NM_023422|Hist1h2bc|68024|histone cluster 1, H2bc	AK005191|Hist1h2bc|68024|histone cluster 1, H2bc	AK005407|Hist1h2bc|68024|histone cluster 1, H2bc	BC019673|Hist1h2bc|68024|histone cluster 1, H2bc	BC082774|Hist1h2bc|68024|histone cluster 1, H2bc
mm9_v1_chr16_-_84831712_84831743	1.28599	HOX{A6,A7,B6,B7}.p2	U77128|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm9_v1_chr7_-_116651647_116651647	1.28292	HOX{A6,A7,B6,B7}.p2	AY572454|Trim66|330627|tripartite motif-containing 66	AY572455|Trim66|330627|tripartite motif-containing 66	NM_001170912|Trim66|330627|tripartite motif-containing 66	NM_181853|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr12_-_15823536_15823550	1.28188	HOX{A6,A7,B6,B7}.p2	BC037387|Trib2|217410|tribbles homolog 2 (Drosophila)	AK044747|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr7_-_134158693_134158794	1.28009	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_-_9570742_9570800	1.27897	HOX{A6,A7,B6,B7}.p2	AF302655|Asph|65973|aspartate-beta-hydroxylase	AF302653|Asph|65973|aspartate-beta-hydroxylase	AK009170|Asph|65973|aspartate-beta-hydroxylase	BC128299|Asph|65973|aspartate-beta-hydroxylase	BC152365|Asph|65973|aspartate-beta-hydroxylase	AK028679|Asph|65973|aspartate-beta-hydroxylase	AK017453|Asph|65973|aspartate-beta-hydroxylase	AK014674|Asph|65973|aspartate-beta-hydroxylase	AK030694|Asph|65973|aspartate-beta-hydroxylase	AK009903|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chrX_+_160577312_160577325	1.27832	HOX{A6,A7,B6,B7}.p2	EF408739|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	EF408740|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr5_-_149363603_149363821	1.27809	HOX{A6,A7,B6,B7}.p2	AF044223|Ubl3|24109|ubiquitin-like 3	AK134598|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr11_-_69509298_69509323	1.27722	HOX{A6,A7,B6,B7}.p2	BC096441|BC096441|619441|cDNA sequence BC096441
mm9_v1_chrX_+_45976916_45976963	1.2762	HOX{A6,A7,B6,B7}.p2	AK051145|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AK148277|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr3_+_134944184_134944206	1.27344	HOX{A6,A7,B6,B7}.p2	NM_001172055|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2	NM_027208|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2	BC021461|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr8_+_86525604_86525604	1.2719	HOX{A6,A7,B6,B7}.p2	BC147276|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC147277|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172025|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172026|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	NM_183097|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene
mm9_v1_chr9_+_47338449_47338455	1.2716	HOX{A6,A7,B6,B7}.p2	AK013775|Cadm1|54725|cell adhesion molecule 1	AB064265|Cadm1|54725|cell adhesion molecule 1	AB092414|Cadm1|54725|cell adhesion molecule 1	AB183399|Cadm1|54725|cell adhesion molecule 1	AB183400|Cadm1|54725|cell adhesion molecule 1	AB183401|Cadm1|54725|cell adhesion molecule 1	AB183402|Cadm1|54725|cell adhesion molecule 1	AY351388|Cadm1|54725|cell adhesion molecule 1	DQ279856|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr6_+_140602773_140602776	1.27069	HOX{A6,A7,B6,B7}.p2	AK050137|Aebp2|11569|AE binding protein 2
mm9_v1_chr6_-_115201866_115201882	1.27047	HOX{A6,A7,B6,B7}.p2	AK079347|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK140367|Timp4|110595|tissue inhibitor of metalloproteinase 4	NM_080639|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr14_+_70930491_70930682	1.27007	HOX{A6,A7,B6,B7}.p2	AK087125|Lgi3|213469|leucine-rich repeat LGI family, member 3	NM_145219|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK132296|Lgi3|213469|leucine-rich repeat LGI family, member 3	AF515590|Lgi3|213469|leucine-rich repeat LGI family, member 3	AY174077|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK049831|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK163664|Lgi3|213469|leucine-rich repeat LGI family, member 3	AK047495|Lgi3|213469|leucine-rich repeat LGI family, member 3
mm9_v1_chr5_-_114541313_114541402	1.26622	HOX{A6,A7,B6,B7}.p2	BC059878|Svop|68666|SV2 related protein	AK047655|Svop|68666|SV2 related protein	AK053833|Svop|68666|SV2 related protein	AK160770|Svop|68666|SV2 related protein	AK047764|Svop|68666|SV2 related protein	AK082744|Svop|68666|SV2 related protein	NM_026805|Svop|68666|SV2 related protein
mm9_v1_chr8_-_96560811_96560953	1.26552	HOX{A6,A7,B6,B7}.p2	AK204985|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC090834|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK146419|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK160147|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK012308|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK020150|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK019433|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK147061|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC008270|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK011688|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_026623|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm9_v1_chr9_-_109986879_109987026	1.26472	HOX{A6,A7,B6,B7}.p2	AK193613|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr14_-_21613162_21613325	1.26261	HOX{A6,A7,B6,B7}.p2	AF395884|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK154764|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC025597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK078311|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC019162|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK081969|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK031213|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK054406|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039138|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039139|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_178597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma
mm9_v1_chr4_+_21858472_21858503	1.26083	HOX{A6,A7,B6,B7}.p2	AK144924|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	NM_175234|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK081616|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK082464|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK018081|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene
mm9_v1_chr1_+_153418502_153418564	1.26077	HOX{A6,A7,B6,B7}.p2	NM_022018|Fam129a|63913|family with sequence similarity 129, member A
mm9_v1_chr4_+_94406190_94406316	1.2586	HOX{A6,A7,B6,B7}.p2	X67553|Tek|21687|endothelial-specific receptor tyrosine kinase	X71426|Tek|21687|endothelial-specific receptor tyrosine kinase	S67051|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr8_+_96561162_96561175	1.25522	HOX{A6,A7,B6,B7}.p2	AK166343|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr12_+_25265583_25265583	1.25499	HOX{A6,A7,B6,B7}.p2	AF411211|Grhl1|195733|grainyhead-like 1 (Drosophila)	NM_145890|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr17_+_34729396_34729495	1.25245	HOX{A6,A7,B6,B7}.p2	AF020198|Pbx2|18515|pre B-cell leukemia transcription factor 2	NM_017463|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC087615|Pbx2|18515|pre B-cell leukemia transcription factor 2	AK134357|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr3_+_107989221_107989318	1.24865	HOX{A6,A7,B6,B7}.p2	AK173118|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_001004293|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_146137|Amigo1|229715|adhesion molecule with Ig like domain 1	BC022907|Amigo1|229715|adhesion molecule with Ig like domain 1	AK035960|Amigo1|229715|adhesion molecule with Ig like domain 1	BC010598|Amigo1|229715|adhesion molecule with Ig like domain 1
mm9_v1_chr10_-_80170037_80170073	1.24518	HOX{A6,A7,B6,B7}.p2	AK208513|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr9_-_71959599_71959699	1.24491	HOX{A6,A7,B6,B7}.p2	M97635|Tcf12|21406|transcription factor 12	BC037097|Tcf12|21406|transcription factor 12	AK143246|Tcf12|21406|transcription factor 12	NM_011544|Tcf12|21406|transcription factor 12	AK169800|Tcf12|21406|transcription factor 12
mm9_v1_chr9_-_44096170_44096326	1.24449	HOX{A6,A7,B6,B7}.p2	AY040865|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AF411084|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AJ426047|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AF425077|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	BC016200|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AK043147|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	NM_138955|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4
mm9_v1_chr9_+_35259660_35259661	1.24258	HOX{A6,A7,B6,B7}.p2	AF090866|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	NM_021339|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	BC109176|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes
mm9_v1_chr2_+_118572683_118572786	1.24184	HOX{A6,A7,B6,B7}.p2	AK077391|5430417L22Rik|100043272|RIKEN cDNA 5430417L22 gene	AK040944|5430417L22Rik|100043272|RIKEN cDNA 5430417L22 gene
mm9_v1_chr17_+_86567513_86567537	1.23906	HOX{A6,A7,B6,B7}.p2	AK085351|Prkce|18754|protein kinase C, epsilon
mm9_v1_chr1_-_20810238_20810392	1.23898	HOX{A6,A7,B6,B7}.p2	X62154|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	BC031700|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	NM_008563|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK146497|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK147065|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	BC020400|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK148006|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK088142|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK133850|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK145563|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chr3_-_89049756_89049818	1.22974	HOX{A6,A7,B6,B7}.p2	BC082299|Trim46|360213|tripartite motif-containing 46	NM_183037|Trim46|360213|tripartite motif-containing 46
mm9_v1_chr14_+_73992436_73992469	1.22681	HOX{A6,A7,B6,B7}.p2	AK003867|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit
mm9_v1_chr6_-_72312366_72312409	1.22489	HOX{A6,A7,B6,B7}.p2	BC005559|Rnf181|66510|ring finger protein 181	BC083119|Rnf181|66510|ring finger protein 181	NM_025607|Rnf181|66510|ring finger protein 181	AK168670|Rnf181|66510|ring finger protein 181	AK010854|Rnf181|66510|ring finger protein 181	AK014094|Rnf181|66510|ring finger protein 181	AK159788|Rnf181|66510|ring finger protein 181	AK166904|Rnf181|66510|ring finger protein 181	AK166995|Rnf181|66510|ring finger protein 181	AK167396|Rnf181|66510|ring finger protein 181	AK167633|Rnf181|66510|ring finger protein 181	AK167935|Rnf181|66510|ring finger protein 181
mm9_v1_chr3_-_88636394_88636410	1.22486	HOX{A6,A7,B6,B7}.p2	BC094555|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK036207|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK038592|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK040690|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK075724|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK083200|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK084105|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene
mm9_v1_chr8_+_85689250_85689250	1.21939	HOX{A6,A7,B6,B7}.p2	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr10_+_80643263_80643395	1.21852	HOX{A6,A7,B6,B7}.p2	AK189998|Eef2|13629|eukaryotic translation elongation factor 2	AK190198|Eef2|13629|eukaryotic translation elongation factor 2	AK190350|Eef2|13629|eukaryotic translation elongation factor 2	AK190868|Eef2|13629|eukaryotic translation elongation factor 2	AK191552|Eef2|13629|eukaryotic translation elongation factor 2	AK191881|Eef2|13629|eukaryotic translation elongation factor 2	AK192244|Eef2|13629|eukaryotic translation elongation factor 2	AK192889|Eef2|13629|eukaryotic translation elongation factor 2	AK192915|Eef2|13629|eukaryotic translation elongation factor 2	AK193101|Eef2|13629|eukaryotic translation elongation factor 2	AK193468|Eef2|13629|eukaryotic translation elongation factor 2	AK193703|Eef2|13629|eukaryotic translation elongation factor 2	AK193872|Eef2|13629|eukaryotic translation elongation factor 2	AK194719|Eef2|13629|eukaryotic translation elongation factor 2	AK195368|Eef2|13629|eukaryotic translation elongation factor 2	AK195633|Eef2|13629|eukaryotic translation elongation factor 2	AK195893|Eef2|13629|eukaryotic translation elongation factor 2	AK196946|Eef2|13629|eukaryotic translation elongation factor 2	AK197219|Eef2|13629|eukaryotic translation elongation factor 2	AK197725|Eef2|13629|eukaryotic translation elongation factor 2	AK198008|Eef2|13629|eukaryotic translation elongation factor 2	AK198317|Eef2|13629|eukaryotic translation elongation factor 2	AK198429|Eef2|13629|eukaryotic translation elongation factor 2	AK199118|Eef2|13629|eukaryotic translation elongation factor 2	AK200031|Eef2|13629|eukaryotic translation elongation factor 2	AK200070|Eef2|13629|eukaryotic translation elongation factor 2	AK200383|Eef2|13629|eukaryotic translation elongation factor 2	AK201054|Eef2|13629|eukaryotic translation elongation factor 2	AK201169|Eef2|13629|eukaryotic translation elongation factor 2	AK201226|Eef2|13629|eukaryotic translation elongation factor 2	AK201313|Eef2|13629|eukaryotic translation elongation factor 2	AK201376|Eef2|13629|eukaryotic translation elongation factor 2	AK202006|Eef2|13629|eukaryotic translation elongation factor 2	AK202706|Eef2|13629|eukaryotic translation elongation factor 2	AK202834|Eef2|13629|eukaryotic translation elongation factor 2	AK203709|Eef2|13629|eukaryotic translation elongation factor 2	AK203838|Eef2|13629|eukaryotic translation elongation factor 2	AK204069|Eef2|13629|eukaryotic translation elongation factor 2	AK204359|Eef2|13629|eukaryotic translation elongation factor 2	AK204850|Eef2|13629|eukaryotic translation elongation factor 2	AK207898|Eef2|13629|eukaryotic translation elongation factor 2	AK215864|Eef2|13629|eukaryotic translation elongation factor 2	AK215877|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr16_+_91648097_91648146	1.21749	HOX{A6,A7,B6,B7}.p2	AK019312|Son|20658|Son DNA binding protein	BC061113|Son|20658|Son DNA binding protein	AK019081|Son|20658|Son DNA binding protein	AF193607|Son|20658|Son DNA binding protein	AK008256|Son|20658|Son DNA binding protein	AK008478|Son|20658|Son DNA binding protein	BC145121|Son|20658|Son DNA binding protein	BC046419|Son|20658|Son DNA binding protein	BC051200|Son|20658|Son DNA binding protein	BC055728|Son|20658|Son DNA binding protein
mm9_v1_chr8_+_86520110_86520238	1.21696	HOX{A6,A7,B6,B7}.p2	AK131888|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chrX_-_35917684_35917838	1.21513	HOX{A6,A7,B6,B7}.p2	AK170632|Cul4b|72584|cullin 4B
mm9_v1_chr9_-_60497537_60497561	1.21428	HOX{A6,A7,B6,B7}.p2	AK082406|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr9_-_88987672_88987672	1.20952	HOX{A6,A7,B6,B7}.p2	NM_001170884|Trim43b|666747|tripartite motif-containing 43B
mm9_v1_chr15_-_102196701_102196763	1.20943	HOX{A6,A7,B6,B7}.p2	BC113150|Sp7|170574|Sp7 transcription factor 7	NM_130458|Sp7|170574|Sp7 transcription factor 7	AK032521|Sp7|170574|Sp7 transcription factor 7	AF184902|Sp7|170574|Sp7 transcription factor 7	AK076229|Sp7|170574|Sp7 transcription factor 7
mm9_v1_chr3_-_122687238_122687429	1.20925	HOX{A6,A7,B6,B7}.p2	AK040332|Usp53|99526|ubiquitin specific peptidase 53	AK140453|Usp53|99526|ubiquitin specific peptidase 53	BC096383|Usp53|99526|ubiquitin specific peptidase 53	AK036876|Usp53|99526|ubiquitin specific peptidase 53	NM_133857|Usp53|99526|ubiquitin specific peptidase 53	AK030317|Usp53|99526|ubiquitin specific peptidase 53	AK045953|Usp53|99526|ubiquitin specific peptidase 53
mm9_v1_chr1_+_167415313_167415432	1.20815	HOX{A6,A7,B6,B7}.p2	AK029849|Adcy10|271639|adenylate cyclase 10	AK133181|Adcy10|271639|adenylate cyclase 10	NM_173029|Adcy10|271639|adenylate cyclase 10	AK015262|Adcy10|271639|adenylate cyclase 10	BC138448|Adcy10|271639|adenylate cyclase 10	BC145283|Adcy10|271639|adenylate cyclase 10
mm9_v1_chr17_-_41071432_41071526	1.20749	HOX{A6,A7,B6,B7}.p2	BC018524|Cenpq|83815|centromere protein Q	AK076094|Cenpq|83815|centromere protein Q	AK011998|Cenpq|83815|centromere protein Q	AK012179|Cenpq|83815|centromere protein Q	AK020040|Cenpq|83815|centromere protein Q	NM_031863|Cenpq|83815|centromere protein Q	AK157569|Cenpq|83815|centromere protein Q
mm9_v1_chr4_+_34011567_34011625	1.2055	HOX{A6,A7,B6,B7}.p2	BC075644|Cnr1|12801|cannabinoid receptor 1 (brain)	BC070447|Cnr1|12801|cannabinoid receptor 1 (brain)	NM_007726|Cnr1|12801|cannabinoid receptor 1 (brain)	AY522554|Cnr1|12801|cannabinoid receptor 1 (brain)
mm9_v1_chr9_-_64585562_64585585	1.2047	HOX{A6,A7,B6,B7}.p2	AK014268|Rab11a|53869|RAB11a, member RAS oncogene family	AK147122|Rab11a|53869|RAB11a, member RAS oncogene family	NM_017382|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr11_-_86509102_86509123	1.20253	HOX{A6,A7,B6,B7}.p2	AK018633|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr6_+_108163089_108163111	1.20187	HOX{A6,A7,B6,B7}.p2	AK047719|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	AK137477|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	NM_010585|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	X15373|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr8_+_97296093_97296104	1.20129	HOX{A6,A7,B6,B7}.p2	AB030188|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK078285|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138214|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138472|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138574|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK154646|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr1_-_64125352_64125397	1.19811	HOX{A6,A7,B6,B7}.p2	AK086122|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK036514|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr19_-_38298606_38298649	1.1958	HOX{A6,A7,B6,B7}.p2	NM_001081075|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene	AK172241|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene	AK017666|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene
mm9_v1_chr2_-_152657417_152657458	1.19509	HOX{A6,A7,B6,B7}.p2	BC089016|Bcl2l1|12048|BCL2-like 1	NM_009743|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr19_-_4042215_4042235	1.19352	HOX{A6,A7,B6,B7}.p2	BC094623|Gstp2|14869|glutathione S-transferase, pi 2	BC064781|Gstp2|14869|glutathione S-transferase, pi 2	NM_181796|Gstp2|14869|glutathione S-transferase, pi 2	BC100587|Gstp2|14869|glutathione S-transferase, pi 2
mm9_v1_chr10_-_33816255_33816324	1.19264	HOX{A6,A7,B6,B7}.p2	AK161070|Fam26e|103511|family with sequence similarity 26, member E	AK052861|Fam26e|103511|family with sequence similarity 26, member E	AK078850|Fam26e|103511|family with sequence similarity 26, member E	BC025893|Fam26e|103511|family with sequence similarity 26, member E	AK085925|Fam26e|103511|family with sequence similarity 26, member E	NM_178908|Fam26e|103511|family with sequence similarity 26, member E
mm9_v1_chr13_-_76081142_76081219	1.19093	HOX{A6,A7,B6,B7}.p2	AK139158|Rhobtb3|73296|Rho-related BTB domain containing 3	AK020938|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr7_+_120909680_120909687	1.18941	HOX{A6,A7,B6,B7}.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr5_+_102910409_102910555	1.18864	HOX{A6,A7,B6,B7}.p2	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr1_+_167693876_167693939	1.18609	HOX{A6,A7,B6,B7}.p2	AK005388|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK010947|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK144101|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AF084524|Creg1|433375|cellular repressor of E1A-stimulated genes 1	BC027426|Creg1|433375|cellular repressor of E1A-stimulated genes 1	NM_011804|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK150006|Creg1|433375|cellular repressor of E1A-stimulated genes 1
mm9_v1_chr16_+_18070202_18070305	1.18441	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_60879305_60879305	1.1832	HOX{A6,A7,B6,B7}.p2	AK017299|Kcnj12|16515|potassium inwardly-rectifying channel, subfamily J, member 12	NM_010603|Kcnj12|16515|potassium inwardly-rectifying channel, subfamily J, member 12
mm9_v1_chr1_+_62750471_62750778	1.18093	HOX{A6,A7,B6,B7}.p2	AK153553|Nrp2|18187|neuropilin 2	BC057028|Nrp2|18187|neuropilin 2	BC098200|Nrp2|18187|neuropilin 2	AF483506|Nrp2|18187|neuropilin 2	AF483507|Nrp2|18187|neuropilin 2
mm9_v1_chr1_+_38108051_38108073	1.17881	HOX{A6,A7,B6,B7}.p2	AK037432|Eif5b|226982|eukaryotic translation initiation factor 5B
mm9_v1_chr1_+_127573551_127573586	1.1786	HOX{A6,A7,B6,B7}.p2	BC085285|Gpr39|71111|G protein-coupled receptor 39	NM_027677|Gpr39|71111|G protein-coupled receptor 39
mm9_v1_chr10_+_88194153_88194296	1.17837	HOX{A6,A7,B6,B7}.p2	AK018138|Arl1|104303|ADP-ribosylation factor-like 1	AK010732|Arl1|104303|ADP-ribosylation factor-like 1	NM_025859|Arl1|104303|ADP-ribosylation factor-like 1	AK167748|Arl1|104303|ADP-ribosylation factor-like 1	BC096684|Arl1|104303|ADP-ribosylation factor-like 1
mm9_v1_chr3_-_57379831_57379833	1.17646	HOX{A6,A7,B6,B7}.p2	AK142299|Wwtr1|97064|WW domain containing transcription regulator 1	NM_001168281|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr14_-_70204956_70205151	1.17623	HOX{A6,A7,B6,B7}.p2	BC056954|Rhobtb2|246710|Rho-related BTB domain containing 2	AK037927|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chrX_+_55283804_55283819	1.17435	HOX{A6,A7,B6,B7}.p2	AK139364|Zic3|22773|zinc finger protein of the cerebellum 3	NM_009575|Zic3|22773|zinc finger protein of the cerebellum 3
mm9_v1_chr11_-_29147217_29147312	1.17396	HOX{A6,A7,B6,B7}.p2	BC005731|Ccdc104|216618|coiled-coil domain containing 104	AK075858|Ccdc104|216618|coiled-coil domain containing 104	NM_025740|Ccdc104|216618|coiled-coil domain containing 104	AK010468|Ccdc104|216618|coiled-coil domain containing 104	AK016479|Ccdc104|216618|coiled-coil domain containing 104
mm9_v1_chr2_+_174170886_174171016	1.17369	HOX{A6,A7,B6,B7}.p2	AK178212|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182236|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182338|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK183674|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK186374|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr4_-_109078858_109078861	1.17322	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_120151645_120151699	1.17249	HOX{A6,A7,B6,B7}.p2	BC069995|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr5_+_149996135_149996309	1.17168	HOX{A6,A7,B6,B7}.p2	NM_001013378|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115149|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115150|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115151|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115153|Uspl1|231915|ubiquitin specific peptidase like 1	AK050969|Uspl1|231915|ubiquitin specific peptidase like 1	AK145409|Uspl1|231915|ubiquitin specific peptidase like 1	BC028849|Uspl1|231915|ubiquitin specific peptidase like 1	AK168981|Uspl1|231915|ubiquitin specific peptidase like 1	AK146820|Uspl1|231915|ubiquitin specific peptidase like 1	AK168702|Uspl1|231915|ubiquitin specific peptidase like 1	AK088787|Uspl1|231915|ubiquitin specific peptidase like 1	AK161654|Uspl1|231915|ubiquitin specific peptidase like 1	BC086664|Uspl1|231915|ubiquitin specific peptidase like 1	AK179867|Uspl1|231915|ubiquitin specific peptidase like 1
mm9_v1_chr9_-_58049842_58049944	1.17065	HOX{A6,A7,B6,B7}.p2	EU497918|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	BC059068|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr6_-_137119016_137119017	1.16883	HOX{A6,A7,B6,B7}.p2	NM_181988|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	BC026463|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr5_+_34339551_34339692	1.16591	HOX{A6,A7,B6,B7}.p2	BC075616|Nat8l|269642|N-acetyltransferase 8-like	DQ174094|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr11_+_59475986_59476013	1.16362	HOX{A6,A7,B6,B7}.p2	AK154807|Mprip|26936|myosin phosphatase Rho interacting protein	NM_012027|Mprip|26936|myosin phosphatase Rho interacting protein	NM_201245|Mprip|26936|myosin phosphatase Rho interacting protein	AK158296|Mprip|26936|myosin phosphatase Rho interacting protein	AK171089|Mprip|26936|myosin phosphatase Rho interacting protein	AK170849|Mprip|26936|myosin phosphatase Rho interacting protein
mm9_v1_chr6_-_122287014_122287032	1.1619	HOX{A6,A7,B6,B7}.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr11_-_109957250_109957250	1.15992	HOX{A6,A7,B6,B7}.p2	NM_153145|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr19_+_29772410_29772430	1.15742	HOX{A6,A7,B6,B7}.p2	AK020928|Mlana|77836|melan-A	BC111114|Mlana|77836|melan-A	NM_029993|Mlana|77836|melan-A
mm9_v1_chr4_-_138866566_138866630	1.1571	HOX{A6,A7,B6,B7}.p2	BC019216|Pqlc2|212555|PQ loop repeat containing 2	AK081661|Pqlc2|212555|PQ loop repeat containing 2	AK156668|Pqlc2|212555|PQ loop repeat containing 2	NM_145384|Pqlc2|212555|PQ loop repeat containing 2
mm9_v1_chr4_+_8462805_8462808	1.15215	HOX{A6,A7,B6,B7}.p2	AK135421|Rab2a|59021|RAB2A, member RAS oncogene family	AK163320|Rab2a|59021|RAB2A, member RAS oncogene family	AK146179|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr15_-_24957039_24957112	1.15192	HOX{A6,A7,B6,B7}.p2	AK033069|Gm2824|100040529|predicted gene 2824	AK083927|Gm2824|100040529|predicted gene 2824
mm9_v1_chr10_+_127526038_127526102	1.15098	HOX{A6,A7,B6,B7}.p2	BC018392|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK183981|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198015|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198554|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK200200|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK205830|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212143|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK178407|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK182340|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK189215|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK190147|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK191197|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK192149|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198620|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK202885|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK215685|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216714|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217489|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK195031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK196936|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198338|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr5_+_34339258_34339295	1.14727	HOX{A6,A7,B6,B7}.p2	AK147703|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr1_+_173275799_173275833	1.14622	HOX{A6,A7,B6,B7}.p2	BC049606|Pfdn2|18637|prefoldin 2	NM_011070|Pfdn2|18637|prefoldin 2
mm9_v1_chr3_+_105776628_105776733	1.14495	HOX{A6,A7,B6,B7}.p2	BC137995|Ovgp1|12659|oviductal glycoprotein 1	AK054141|Ovgp1|12659|oviductal glycoprotein 1	D32137|Ovgp1|12659|oviductal glycoprotein 1	NM_007696|Ovgp1|12659|oviductal glycoprotein 1	AY521455|Ovgp1|12659|oviductal glycoprotein 1
mm9_v1_chr9_-_51976215_51976215	1.14308	HOX{A6,A7,B6,B7}.p2	NM_001162921|Zc3h12c|244871|zinc finger CCCH type containing 12C
mm9_v1_chr9_+_5345475_5345506	1.14291	HOX{A6,A7,B6,B7}.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr3_+_134951618_134951625	1.14164	HOX{A6,A7,B6,B7}.p2	AK007603|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr6_+_115528094_115528179	1.14038	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_71850877_71851010	1.13966	HOX{A6,A7,B6,B7}.p2	AF151392|Aipl1|114230|aryl hydrocarbon receptor-interacting protein-like 1	AF296412|Aipl1|114230|aryl hydrocarbon receptor-interacting protein-like 1	BC028285|Aipl1|114230|aryl hydrocarbon receptor-interacting protein-like 1	NM_053245|Aipl1|114230|aryl hydrocarbon receptor-interacting protein-like 1
mm9_v1_chr2_-_152655725_152655826	1.13854	HOX{A6,A7,B6,B7}.p2	U10100|Bcl2l1|12048|BCL2-like 1	U10101|Bcl2l1|12048|BCL2-like 1	X83574|Bcl2l1|12048|BCL2-like 1	BC089017|Bcl2l1|12048|BCL2-like 1	U51278|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr10_+_115738429_115738633	1.13172	HOX{A6,A7,B6,B7}.p2	AK147439|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	AK147668|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	NM_029928|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	AY077755|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	BC141006|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	BC145111|Ptprb|19263|protein tyrosine phosphatase, receptor type, B
mm9_v1_chr5_-_137739455_137739483	1.13087	HOX{A6,A7,B6,B7}.p2	AK150310|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)	AK152710|Srrt|83701|serrate RNA effector molecule homolog (Arabidopsis)
mm9_v1_chr12_+_104626888_104626975	1.13016	HOX{A6,A7,B6,B7}.p2	NM_026580|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK076336|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	NM_001177841|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	BC049551|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK016449|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK160505|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK019830|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006346|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006469|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006054|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	BC052409|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2
mm9_v1_chr4_+_24423561_24423690	1.12945	HOX{A6,A7,B6,B7}.p2	AK166072|Mms22l|212377|MMS22-like, DNA repair protein	AK164069|Mms22l|212377|MMS22-like, DNA repair protein	NM_199467|Mms22l|212377|MMS22-like, DNA repair protein	AK144799|Mms22l|212377|MMS22-like, DNA repair protein
mm9_v1_chr3_-_137794277_137794364	1.12216	HOX{A6,A7,B6,B7}.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr17_-_37088578_37088736	1.11974	HOX{A6,A7,B6,B7}.p2	BC027737|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK077455|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK089107|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK162607|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK170104|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK005379|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	NM_029632|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr3_-_115832605_115832605	1.11798	HOX{A6,A7,B6,B7}.p2	BC029823|Vcam1|22329|vascular cell adhesion molecule 1	NM_011693|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr12_-_105143089_105143106	1.11596	HOX{A6,A7,B6,B7}.p2	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC009818|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC010984|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC011041|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	M75720|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC021780|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC024108|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr19_+_45122281_45122364	1.11421	HOX{A6,A7,B6,B7}.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr7_-_53371419_53371532	1.11405	HOX{A6,A7,B6,B7}.p2	AK085812|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
mm9_v1_chr6_+_129462572_129462636	1.10837	HOX{A6,A7,B6,B7}.p2	AK085389|D630042F21Rik|330428|RIKEN cDNA D630042F21 gene	NM_001081186|D630042F21Rik|330428|RIKEN cDNA D630042F21 gene	AK085571|D630042F21Rik|330428|RIKEN cDNA D630042F21 gene
mm9_v1_chr7_+_73888389_73888582	1.10834	HOX{A6,A7,B6,B7}.p2	NM_001164201|Lass3|545975|LAG1 homolog, ceramide synthase 3	DQ646881|Lass3|545975|LAG1 homolog, ceramide synthase 3
mm9_v1_chr8_-_113605607_113605607	1.10768	HOX{A6,A7,B6,B7}.p2	NM_181549|Clec18a|353287|C-type lectin domain family 18, member A
mm9_v1_chr2_+_32477264_32477277	1.10729	HOX{A6,A7,B6,B7}.p2	DQ486026|Ak1|11636|adenylate kinase 1	AK046613|Ak1|11636|adenylate kinase 1	NM_001198790|Ak1|11636|adenylate kinase 1
mm9_v1_chr15_-_74564742_74564761	1.10664	HOX{A6,A7,B6,B7}.p2	BC099511|Lypd2|68311|Ly6/Plaur domain containing 2	NM_026671|Lypd2|68311|Ly6/Plaur domain containing 2	BC132407|Lypd2|68311|Ly6/Plaur domain containing 2	BC132409|Lypd2|68311|Ly6/Plaur domain containing 2	AB009019|Lypd2|68311|Ly6/Plaur domain containing 2
mm9_v1_chr17_-_35286889_35287021	1.10664	HOX{A6,A7,B6,B7}.p2	AK204617|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr1_+_72354084_72354123	1.10558	HOX{A6,A7,B6,B7}.p2	X66323|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AF166486|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK010416|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK167312|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK168913|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK169838|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC029218|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chrX_+_53708015_53708070	1.10318	HOX{A6,A7,B6,B7}.p2	NM_172779|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK031945|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	BC051161|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK083942|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK160627|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm9_v1_chr2_-_91019477_91019477	1.10223	HOX{A6,A7,B6,B7}.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr5_+_64550623_64550689	1.10189	HOX{A6,A7,B6,B7}.p2	AK122445|Tbc1d1|57915|TBC1 domain family, member 1
mm9_v1_chr1_-_136700389_136700428	1.1014	HOX{A6,A7,B6,B7}.p2	AK035285|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr13_-_55650696_55650820	1.10129	HOX{A6,A7,B6,B7}.p2	BC023015|Fam193b|212483|family with sequence similarity 193, member B	BC021381|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr2_+_84890611_84890701	1.09955	HOX{A6,A7,B6,B7}.p2	NM_001081260|Tnks1bp1|228140|tankyrase 1 binding protein 1	BC150947|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr18_+_67365012_67365154	1.0948	HOX{A6,A7,B6,B7}.p2	NM_024190|Chmp1b|67064|chromatin modifying protein 1B	AK151071|Chmp1b|67064|chromatin modifying protein 1B	AK014091|Chmp1b|67064|chromatin modifying protein 1B	AK012996|Chmp1b|67064|chromatin modifying protein 1B	AK167614|Chmp1b|67064|chromatin modifying protein 1B	BC002229|Chmp1b|67064|chromatin modifying protein 1B	BC034442|Chmp1b|67064|chromatin modifying protein 1B	CT010307|Chmp1b|67064|chromatin modifying protein 1B
mm9_v1_chr10_-_109437274_109437274	1.09409	HOX{A6,A7,B6,B7}.p2	NM_001081035|Nav3|260315|neuron navigator 3
mm9_v1_chr6_+_127022919_127023047	1.09298	HOX{A6,A7,B6,B7}.p2	AK155687|Fgf23|64654|fibroblast growth factor 23	NM_022657|Fgf23|64654|fibroblast growth factor 23	AF263536|Fgf23|64654|fibroblast growth factor 23	BC120605|Fgf23|64654|fibroblast growth factor 23	AB037889|Fgf23|64654|fibroblast growth factor 23
mm9_v1_chr14_-_61664997_61665146	1.09285	HOX{A6,A7,B6,B7}.p2	AK028146|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19	AF167554|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr10_+_59568976_59569004	1.09151	HOX{A6,A7,B6,B7}.p2	AJ278999|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	BC057324|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	NM_052994|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr13_-_89881946_89882116	1.08756	HOX{A6,A7,B6,B7}.p2	BC021652|Vcan|13003|versican	AK163927|Vcan|13003|versican	AK135324|Vcan|13003|versican	AK032794|Vcan|13003|versican	NM_001081249|Vcan|13003|versican	NM_001134474|Vcan|13003|versican	NM_001134475|Vcan|13003|versican	NM_019389|Vcan|13003|versican	NM_172955|Vcan|13003|versican
mm9_v1_chr16_-_55838834_55839011	1.08649	HOX{A6,A7,B6,B7}.p2	AB020974|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	BC033044|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chrX_+_111587911_111588212	1.08585	HOX{A6,A7,B6,B7}.p2	AK081448|Klhl4|237010|kelch-like 4 (Drosophila)	AK085099|Klhl4|237010|kelch-like 4 (Drosophila)	AK161786|Klhl4|237010|kelch-like 4 (Drosophila)	BC099954|Klhl4|237010|kelch-like 4 (Drosophila)	AK081937|Klhl4|237010|kelch-like 4 (Drosophila)	NM_172781|Klhl4|237010|kelch-like 4 (Drosophila)	BC141251|Klhl4|237010|kelch-like 4 (Drosophila)	BC057137|Klhl4|237010|kelch-like 4 (Drosophila)	AK044930|Klhl4|237010|kelch-like 4 (Drosophila)
mm9_v1_chr16_+_31422377_31422406	1.08585	HOX{A6,A7,B6,B7}.p2	BC043683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_175177|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr2_-_51004604_51004631	1.08551	HOX{A6,A7,B6,B7}.p2	BC009002|Rnd3|74194|Rho family GTPase 3	AK035195|Rnd3|74194|Rho family GTPase 3	AK048635|Rnd3|74194|Rho family GTPase 3	AK011442|Rnd3|74194|Rho family GTPase 3	NM_028810|Rnd3|74194|Rho family GTPase 3
mm9_v1_chr6_-_122692754_122692762	1.085	HOX{A6,A7,B6,B7}.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chrX_-_98616023_98616023	1.08455	HOX{A6,A7,B6,B7}.p2	BC082320|Zmym3|56364|zinc finger, MYM-type 3	NM_001177987|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr15_+_25682945_25682960	1.08395	HOX{A6,A7,B6,B7}.p2	AK161653|Myo10|17909|myosin X
mm9_v1_chr9_-_108469265_108469296	1.08285	HOX{A6,A7,B6,B7}.p2	AK005252|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	AK014634|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm9_v1_chr17_-_6132461_6132616	1.08224	HOX{A6,A7,B6,B7}.p2	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene
mm9_v1_chr13_-_115178227_115178301	1.07704	HOX{A6,A7,B6,B7}.p2	AF124785|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK020552|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	BC004618|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK011124|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK020108|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	NM_010887|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr4_-_126645421_126645456	1.07691	HOX{A6,A7,B6,B7}.p2	AK129137|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr1_-_166865638_166865652	1.07565	HOX{A6,A7,B6,B7}.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr12_+_72456427_72456435	1.07134	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr17_-_35291759_35291763	1.07128	HOX{A6,A7,B6,B7}.p2	BC034134|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr11_-_62190182_62190262	1.06925	HOX{A6,A7,B6,B7}.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr17_+_35607497_35607530	1.06915	HOX{A6,A7,B6,B7}.p2	K00614|H2-Q10|15007|histocompatibility 2, Q region locus 10
mm9_v1_chr8_+_49184445_49184445	1.06903	HOX{A6,A7,B6,B7}.p2	NM_001161516|Dctd|320685|dCMP deaminase
mm9_v1_chr9_-_70351160_70351184	1.06682	HOX{A6,A7,B6,B7}.p2	BC069835|Rnf111|93836|ring finger 111	AK169999|Rnf111|93836|ring finger 111
mm9_v1_chr1_-_141982814_141983012	1.06654	HOX{A6,A7,B6,B7}.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chr11_-_99877508_99877525	1.06558	HOX{A6,A7,B6,B7}.p2	BC029257|Krt33a|71888|keratin 33A	AK009363|Krt33a|71888|keratin 33A	AK037251|Krt33a|71888|keratin 33A	NM_027983|Krt33a|71888|keratin 33A
mm9_v1_chr11_-_84953442_84953491	1.06449	HOX{A6,A7,B6,B7}.p2	AK170234|Usp32|237898|ubiquitin specific peptidase 32	AK148221|Usp32|237898|ubiquitin specific peptidase 32	NM_001029934|Usp32|237898|ubiquitin specific peptidase 32
mm9_v1_chr1_-_176851949_176851953	1.06193	HOX{A6,A7,B6,B7}.p2	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr17_+_35400983_35401008	1.06094	HOX{A6,A7,B6,B7}.p2	J00407|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr10_-_70386552_70386556	1.06036	HOX{A6,A7,B6,B7}.p2	AK082289|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr16_+_21204820_21205008	1.05946	HOX{A6,A7,B6,B7}.p2	AK144414|Ephb3|13845|Eph receptor B3	BC014822|Ephb3|13845|Eph receptor B3	BC053085|Ephb3|13845|Eph receptor B3	NM_010143|Ephb3|13845|Eph receptor B3	Z49086|Ephb3|13845|Eph receptor B3
mm9_v1_chr2_-_122194653_122194653	1.05926	HOX{A6,A7,B6,B7}.p2	NM_001013829|Shf|435684|Src homology 2 domain containing F
mm9_v1_chr2_+_80479021_80479037	1.05401	HOX{A6,A7,B6,B7}.p2	AK009187|Nup35|69482|nucleoporin 35	AK145775|Nup35|69482|nucleoporin 35
mm9_v1_chr2_-_150730457_150730470	1.05339	HOX{A6,A7,B6,B7}.p2	AK160126|Abhd12|76192|abhydrolase domain containing 12	NM_024465|Abhd12|76192|abhydrolase domain containing 12
mm9_v1_chr4_-_138375124_138375197	1.05014	HOX{A6,A7,B6,B7}.p2	AF162713|Pla2g5|18784|phospholipase A2, group V	BC030899|Pla2g5|18784|phospholipase A2, group V	NM_011110|Pla2g5|18784|phospholipase A2, group V	AK161336|Pla2g5|18784|phospholipase A2, group V
mm9_v1_chr11_-_3997116_3997172	1.04977	HOX{A6,A7,B6,B7}.p2	AK008068|Sec14l2|67815|SEC14-like 2 (S. cerevisiae)
mm9_v1_chr15_+_78859949_78859971	1.04607	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr19_-_38298593_38298596	1.04522	HOX{A6,A7,B6,B7}.p2	AK077572|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene
mm9_v1_chr6_+_124959207_124959358	1.04446	HOX{A6,A7,B6,B7}.p2	AK156026|Zfp384|269800|zinc finger protein 384	AK172476|Zfp384|269800|zinc finger protein 384
mm9_v1_chr16_-_29378636_29378817	1.04356	HOX{A6,A7,B6,B7}.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr2_+_118489015_118489059	1.04272	HOX{A6,A7,B6,B7}.p2	AK158913|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK158944|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr5_+_27143896_27143973	1.04015	HOX{A6,A7,B6,B7}.p2	AF092507|Dpp6|13483|dipeptidylpeptidase 6	NM_010075|Dpp6|13483|dipeptidylpeptidase 6	AK082186|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr2_-_20889276_20889347	1.04009	HOX{A6,A7,B6,B7}.p2	BC150741|Arhgap21|71435|Rho GTPase activating protein 21	BC076629|Arhgap21|71435|Rho GTPase activating protein 21	NM_001081364|Arhgap21|71435|Rho GTPase activating protein 21	NM_001128084|Arhgap21|71435|Rho GTPase activating protein 21
mm9_v1_chr3_+_134944239_134944255	1.03868	HOX{A6,A7,B6,B7}.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr1_+_40572206_40572292	1.03631	HOX{A6,A7,B6,B7}.p2	AF077347|Il18rap|16174|interleukin 18 receptor accessory protein	BC120598|Il18rap|16174|interleukin 18 receptor accessory protein	BC120600|Il18rap|16174|interleukin 18 receptor accessory protein	NM_010553|Il18rap|16174|interleukin 18 receptor accessory protein	AK137541|Il18rap|16174|interleukin 18 receptor accessory protein	AK053176|Il18rap|16174|interleukin 18 receptor accessory protein
mm9_v1_chr2_-_87814819_87814819	1.03626	HOX{A6,A7,B6,B7}.p2	AB061229|Olfr74|117005|olfactory receptor 74	NM_054091|Olfr74|117005|olfactory receptor 74
mm9_v1_chr7_+_134123623_134123662	1.03354	HOX{A6,A7,B6,B7}.p2	AK214056|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	AK207162|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm9_v1_chr10_+_96945057_96945132	1.03188	HOX{A6,A7,B6,B7}.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr1_+_74590933_74590939	1.03166	HOX{A6,A7,B6,B7}.p2	AK014836|Plcd4|18802|phospholipase C, delta 4	NM_148937|Plcd4|18802|phospholipase C, delta 4	AK016945|Plcd4|18802|phospholipase C, delta 4	AK029561|Plcd4|18802|phospholipase C, delta 4
mm9_v1_chr11_+_70027397_70027411	1.03127	HOX{A6,A7,B6,B7}.p2	NM_153081|Slc16a11|216867|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm9_v1_chr7_-_6683113_6683136	1.02968	HOX{A6,A7,B6,B7}.p2	BC085183|Peg3|18616|paternally expressed 3	BC072661|Peg3|18616|paternally expressed 3	AB003040|Peg3|18616|paternally expressed 3	AK044602|Peg3|18616|paternally expressed 3	AK053523|Peg3|18616|paternally expressed 3	AK141217|Peg3|18616|paternally expressed 3	NM_008817|Peg3|18616|paternally expressed 3	AK163845|Peg3|18616|paternally expressed 3
mm9_v1_chr4_+_43419445_43419451	1.02227	HOX{A6,A7,B6,B7}.p2	AK132170|Rusc2|100213|RUN and SH3 domain containing 2	NM_199057|Rusc2|100213|RUN and SH3 domain containing 2	AK122263|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr17_-_36282006_36282154	1.01431	HOX{A6,A7,B6,B7}.p2	J00393|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr8_-_27109536_27109553	1.01325	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_+_79460226_79460359	1.01211	HOX{A6,A7,B6,B7}.p2	BC145120|Abca7|27403|ATP-binding cassette, sub-family A (ABC1), member 7	BC150708|Abca7|27403|ATP-binding cassette, sub-family A (ABC1), member 7	AF287141|Abca7|27403|ATP-binding cassette, sub-family A (ABC1), member 7	NM_013850|Abca7|27403|ATP-binding cassette, sub-family A (ABC1), member 7
mm9_v1_chr5_-_135096084_135096090	1.01092	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_+_25055436_25055599	1.00922	HOX{A6,A7,B6,B7}.p2	AK132229|Zfp93|22755|zinc finger protein 93	NM_009567|Zfp93|22755|zinc finger protein 93	U46186|Zfp93|22755|zinc finger protein 93	AK146095|Zfp93|22755|zinc finger protein 93	AK165630|Zfp93|22755|zinc finger protein 93	AK040325|Zfp93|22755|zinc finger protein 93	AK028905|Zfp93|22755|zinc finger protein 93
mm9_v1_chr18_+_65185527_65185593	1.00896	HOX{A6,A7,B6,B7}.p2	AK004969|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr7_-_139751384_139751389	1.00851	HOX{A6,A7,B6,B7}.p2	AK190000|Oat|18242|ornithine aminotransferase	AK213292|Oat|18242|ornithine aminotransferase
mm9_v1_chr2_+_181115939_181116074	1.00801	HOX{A6,A7,B6,B7}.p2	AF115339|Lime1|72699|Lck interacting transmembrane adaptor 1	NM_023684|Lime1|72699|Lck interacting transmembrane adaptor 1	AK172632|Lime1|72699|Lck interacting transmembrane adaptor 1
mm9_v1_chr4_-_108790523_108790574	1.00638	HOX{A6,A7,B6,B7}.p2	BC026927|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr12_-_79944026_79944112	1.0054	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_+_36914313_36914320	1.00443	HOX{A6,A7,B6,B7}.p2	AK220188|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr12_-_105143108_105143185	1.00441	HOX{A6,A7,B6,B7}.p2	BC021325|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	NM_009245|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr14_-_120441639_120441656	1.00391	HOX{A6,A7,B6,B7}.p2	AK085382|Oxgr1|239283|oxoglutarate (alpha-ketoglutarate) receptor 1	AK142510|Oxgr1|239283|oxoglutarate (alpha-ketoglutarate) receptor 1	NM_001001490|Oxgr1|239283|oxoglutarate (alpha-ketoglutarate) receptor 1
mm9_v1_chr2_-_155266518_155266522	1.00292	HOX{A6,A7,B6,B7}.p2	BC083187|Ncoa6|56406|nuclear receptor coactivator 6	NM_019825|Ncoa6|56406|nuclear receptor coactivator 6	BC031113|Ncoa6|56406|nuclear receptor coactivator 6
mm9_v1_chrX_+_103398594_103398687	1.00048	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_+_25257180_25257270	1.00036	HOX{A6,A7,B6,B7}.p2	AF411212|Grhl1|195733|grainyhead-like 1 (Drosophila)	BC013080|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK161048|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr19_-_6015778_6015825	0.998718	HOX{A6,A7,B6,B7}.p2	AK171405|Capn1|12333|calpain 1	NM_001110504|Capn1|12333|calpain 1
mm9_v1_chr1_-_94348610_94348663	0.997288	HOX{A6,A7,B6,B7}.p2	AK203226|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr18_-_24761954_24762029	0.995401	HOX{A6,A7,B6,B7}.p2	BC055012|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr13_-_99660903_99660996	0.994535	HOX{A6,A7,B6,B7}.p2	BC055372|Tnpo1|238799|transportin 1	AK167049|Tnpo1|238799|transportin 1	AK045132|Tnpo1|238799|transportin 1	NM_001048267|Tnpo1|238799|transportin 1
mm9_v1_chr8_+_12395518_12395518	0.994534	HOX{A6,A7,B6,B7}.p2	NM_009233|Sox1|20664|SRY-box containing gene 1
mm9_v1_chr11_+_100181296_100181331	0.992918	HOX{A6,A7,B6,B7}.p2	AK150813|Eif1|20918|eukaryotic translation initiation factor 1	AK151575|Eif1|20918|eukaryotic translation initiation factor 1	AK152194|Eif1|20918|eukaryotic translation initiation factor 1	AK169763|Eif1|20918|eukaryotic translation initiation factor 1	AK148032|Eif1|20918|eukaryotic translation initiation factor 1	AK151070|Eif1|20918|eukaryotic translation initiation factor 1	BC003463|Eif1|20918|eukaryotic translation initiation factor 1	NM_011508|Eif1|20918|eukaryotic translation initiation factor 1	BC081429|Eif1|20918|eukaryotic translation initiation factor 1	AF129888|Eif1|20918|eukaryotic translation initiation factor 1	BC010791|Eif1|20918|eukaryotic translation initiation factor 1	BC096691|Eif1|20918|eukaryotic translation initiation factor 1	BC096656|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr4_-_83919835_83919836	0.989943	HOX{A6,A7,B6,B7}.p2	AK018429|Bnc2|242509|basonuclin 2
mm9_v1_chr17_-_87846158_87846274	0.987905	HOX{A6,A7,B6,B7}.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr4_+_44045506_44045645	0.985336	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_83391623_83391671	0.982584	HOX{A6,A7,B6,B7}.p2	AK044758|Tet3|194388|tet oncogene family member 3	AK046543|Tet3|194388|tet oncogene family member 3	AK046552|Tet3|194388|tet oncogene family member 3	AK046553|Tet3|194388|tet oncogene family member 3	NM_183138|Tet3|194388|tet oncogene family member 3
mm9_v1_chr11_+_22920469_22920469	0.982442	HOX{A6,A7,B6,B7}.p2	AK040751|Fam161a|73873|family with sequence similarity 161, member A
mm9_v1_chr9_+_45646611_45646685	0.980596	HOX{A6,A7,B6,B7}.p2	NM_001145947|Bace1|23821|beta-site APP cleaving enzyme 1	NM_011792|Bace1|23821|beta-site APP cleaving enzyme 1	AK033112|Bace1|23821|beta-site APP cleaving enzyme 1	AK041285|Bace1|23821|beta-site APP cleaving enzyme 1	AK080498|Bace1|23821|beta-site APP cleaving enzyme 1	AK082317|Bace1|23821|beta-site APP cleaving enzyme 1	AK163583|Bace1|23821|beta-site APP cleaving enzyme 1	AK046175|Bace1|23821|beta-site APP cleaving enzyme 1	AK082230|Bace1|23821|beta-site APP cleaving enzyme 1	AK049626|Bace1|23821|beta-site APP cleaving enzyme 1	AF190726|Bace1|23821|beta-site APP cleaving enzyme 1	AK014464|Bace1|23821|beta-site APP cleaving enzyme 1	BC048189|Bace1|23821|beta-site APP cleaving enzyme 1
mm9_v1_chr13_-_58228079_58228222	0.980485	HOX{A6,A7,B6,B7}.p2	AK004260|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr4_+_33149973_33150101	0.980204	HOX{A6,A7,B6,B7}.p2	AF024621|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	NM_008076|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	BC057957|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm9_v1_chr14_+_28290299_28290355	0.978225	HOX{A6,A7,B6,B7}.p2	AK173099|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed
mm9_v1_chr2_-_62249934_62250287	0.977459	HOX{A6,A7,B6,B7}.p2	X58384|Dpp4|13482|dipeptidylpeptidase 4	AK040409|Dpp4|13482|dipeptidylpeptidase 4	BC022183|Dpp4|13482|dipeptidylpeptidase 4	AK163085|Dpp4|13482|dipeptidylpeptidase 4	NM_001159543|Dpp4|13482|dipeptidylpeptidase 4	NM_010074|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr2_+_162813216_162813237	0.971936	HOX{A6,A7,B6,B7}.p2	NM_013731|Sgk2|27219|serum/glucocorticoid regulated kinase 2	AK050009|Sgk2|27219|serum/glucocorticoid regulated kinase 2
mm9_v1_chr8_-_48374755_48374779	0.970719	HOX{A6,A7,B6,B7}.p2	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr11_+_29642253_29642464	0.969649	HOX{A6,A7,B6,B7}.p2	AK186869|Rtn4|68585|reticulon 4	AK186438|Rtn4|68585|reticulon 4	AK047253|Rtn4|68585|reticulon 4
mm9_v1_chr11_+_51912342_51912394	0.969287	HOX{A6,A7,B6,B7}.p2	BC003856|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	AK172644|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	AF076192|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	BC054458|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr2_+_120229566_120229631	0.969117	HOX{A6,A7,B6,B7}.p2	AK036238|Ganc|76051|glucosidase, alpha; neutral C	NM_172672|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chr4_+_8462823_8462831	0.96857	HOX{A6,A7,B6,B7}.p2	AK042862|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr6_+_55967502_55967523	0.967954	HOX{A6,A7,B6,B7}.p2	BC026822|Gsbs|19051|G substrate	NM_011153|Gsbs|19051|G substrate	AF071562|Gsbs|19051|G substrate
mm9_v1_chr11_-_102417457_102417523	0.967429	HOX{A6,A7,B6,B7}.p2	AK135410|Gpatch8|237943|G patch domain containing 8	NM_001159492|Gpatch8|237943|G patch domain containing 8
mm9_v1_chr10_+_78243239_78243246	0.965931	HOX{A6,A7,B6,B7}.p2	AK159197|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	NM_009200|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	D83262|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
mm9_v1_chr19_+_56905201_56905201	0.965406	HOX{A6,A7,B6,B7}.p2	AB183528|Tdrd1|83561|tudor domain containing 1	NM_001002241|Tdrd1|83561|tudor domain containing 1
mm9_v1_chr7_+_129210948_129210953	0.964619	HOX{A6,A7,B6,B7}.p2	AK135258|Ubfd1|28018|ubiquitin family domain containing 1	AK140891|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr16_-_79091336_79091341	0.963885	HOX{A6,A7,B6,B7}.p2	NM_008941|Tmprss15|19146|transmembrane protease, serine 15	U73378|Tmprss15|19146|transmembrane protease, serine 15	BC117917|Tmprss15|19146|transmembrane protease, serine 15	BC117918|Tmprss15|19146|transmembrane protease, serine 15	AK033582|Tmprss15|19146|transmembrane protease, serine 15	NM_178855|Tmprss15|19146|transmembrane protease, serine 15
mm9_v1_chr4_-_71861939_71861956	0.962515	HOX{A6,A7,B6,B7}.p2	NM_011599|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm9_v1_chr17_+_34324496_34324509	0.958521	HOX{A6,A7,B6,B7}.p2	AK153890|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	AK166046|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	AK167485|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	NM_001161730|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	NM_013683|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr1_+_59543450_59543567	0.958123	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_49928495_49928639	0.955849	HOX{A6,A7,B6,B7}.p2	AK013771|2900073C17Rik|73020|RIKEN cDNA 2900073C17 gene
mm9_v1_chr4_-_41670160_41670212	0.952672	HOX{A6,A7,B6,B7}.p2	AF098508|Dctn3|53598|dynactin 3	AK003255|Dctn3|53598|dynactin 3	BC061120|Dctn3|53598|dynactin 3	AK002720|Dctn3|53598|dynactin 3	AK011840|Dctn3|53598|dynactin 3	AK159344|Dctn3|53598|dynactin 3	NM_001159565|Dctn3|53598|dynactin 3	NM_016890|Dctn3|53598|dynactin 3
mm9_v1_chr16_-_34096095_34096116	0.951863	HOX{A6,A7,B6,B7}.p2	AK088732|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr2_-_62249889_62249926	0.950701	HOX{A6,A7,B6,B7}.p2	AK153939|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr11_-_99982808_99982882	0.9493	HOX{A6,A7,B6,B7}.p2	NM_010662|Krt13|16663|keratin 13	BC060286|Krt13|16663|keratin 13	AK004635|Krt13|16663|keratin 13	AK010156|Krt13|16663|keratin 13	AK132640|Krt13|16663|keratin 13
mm9_v1_chr19_-_7280741_7280794	0.945873	HOX{A6,A7,B6,B7}.p2	BC054410|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK027996|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK087195|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK140070|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK145273|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK145970|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	BC022575|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	NM_134150|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1
mm9_v1_chrX_-_34731084_34731232	0.945181	HOX{A6,A7,B6,B7}.p2	CT010398|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	AK007840|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	BC024364|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	NM_019443|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1
mm9_v1_chr16_+_77013880_77014313	0.944688	HOX{A6,A7,B6,B7}.p2	AK011798|Usp25|30940|ubiquitin specific peptidase 25	AK036456|Usp25|30940|ubiquitin specific peptidase 25	AF170563|Usp25|30940|ubiquitin specific peptidase 25	BC048171|Usp25|30940|ubiquitin specific peptidase 25	BC063059|Usp25|30940|ubiquitin specific peptidase 25	NM_013918|Usp25|30940|ubiquitin specific peptidase 25
mm9_v1_chr13_-_99754519_99754519	0.944285	HOX{A6,A7,B6,B7}.p2	AK006311|1700024P04Rik|69382|RIKEN cDNA 1700024P04 gene	NM_027064|1700024P04Rik|69382|RIKEN cDNA 1700024P04 gene
mm9_v1_chr1_-_132558108_132558210	0.942992	HOX{A6,A7,B6,B7}.p2	AK136735|C4bp|12269|complement component 4 binding protein	AK162345|C4bp|12269|complement component 4 binding protein	AB094486|C4bp|12269|complement component 4 binding protein	AK149477|C4bp|12269|complement component 4 binding protein	BC012257|C4bp|12269|complement component 4 binding protein	AB094485|C4bp|12269|complement component 4 binding protein	NM_007576|C4bp|12269|complement component 4 binding protein	AK050344|C4bp|12269|complement component 4 binding protein	AK149468|C4bp|12269|complement component 4 binding protein	M17122|C4bp|12269|complement component 4 binding protein
mm9_v1_chr1_-_184397778_184397904	0.942551	HOX{A6,A7,B6,B7}.p2	AK192389|Capn2|12334|calpain 2	AK203804|Capn2|12334|calpain 2	AK198770|Capn2|12334|calpain 2	AK203361|Capn2|12334|calpain 2
mm9_v1_chr12_-_84938095_84938119	0.942548	HOX{A6,A7,B6,B7}.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr1_+_65973093_65973127	0.942504	HOX{A6,A7,B6,B7}.p2	AK013953|Crygf|12969|crystallin, gamma F	NM_027010|Crygf|12969|crystallin, gamma F	BC056453|Crygf|12969|crystallin, gamma F	M64543|Crygf|12969|crystallin, gamma F
mm9_v1_chr8_-_113679781_113679788	0.941521	HOX{A6,A7,B6,B7}.p2	AK088720|Glg1|20340|golgi apparatus protein 1
mm9_v1_chr4_+_125181288_125181474	0.94119	HOX{A6,A7,B6,B7}.p2	NM_008049|Ftl2|14337|ferritin light chain 2	AK145265|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC106145|Ftl1|14325|ferritin light chain 1	BC150761|Ftl2|14337|ferritin light chain 2	S89400|Ftl2|14337|ferritin light chain 2
mm9_v1_chr5_-_149995789_149995819	0.94076	HOX{A6,A7,B6,B7}.p2	AK017599|5730422E09Rik|433966|RIKEN cDNA 5730422E09 gene
mm9_v1_chr18_+_33098694_33098843	0.939951	HOX{A6,A7,B6,B7}.p2	NM_009793|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	AK030219|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	BC070420|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr15_+_35860580_35860704	0.939874	HOX{A6,A7,B6,B7}.p2	AK007749|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr2_-_103143352_103143356	0.939769	HOX{A6,A7,B6,B7}.p2	NM_007914|Ehf|13661|ets homologous factor
mm9_v1_chr12_+_87423503_87423572	0.939593	HOX{A6,A7,B6,B7}.p2	AK006115|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	NM_029601|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	BC038915|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	BC034668|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene
mm9_v1_chr6_+_8898613_8898694	0.937745	HOX{A6,A7,B6,B7}.p2	AK083014|Nxph1|18231|neurexophilin 1
mm9_v1_chr3_+_95086814_95087156	0.937406	HOX{A6,A7,B6,B7}.p2	NM_133858|Fam63a|75007|family with sequence similarity 63, member A	NM_199475|Fam63a|75007|family with sequence similarity 63, member A	AK169673|Fam63a|75007|family with sequence similarity 63, member A	AK036838|Fam63a|75007|family with sequence similarity 63, member A	BC094388|Fam63a|75007|family with sequence similarity 63, member A	AK087859|Fam63a|75007|family with sequence similarity 63, member A	AK162551|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr2_+_162880370_162880424	0.936544	HOX{A6,A7,B6,B7}.p2	AK028497|Mybl2|17865|myeloblastosis oncogene-like 2	NM_008652|Mybl2|17865|myeloblastosis oncogene-like 2	X70472|Mybl2|17865|myeloblastosis oncogene-like 2	BC050842|Mybl2|17865|myeloblastosis oncogene-like 2
mm9_v1_chr3_+_87975676_87975677	0.936529	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_-_56312803_56312803	0.935842	HOX{A6,A7,B6,B7}.p2	AK050499|Pde1c|18575|phosphodiesterase 1C	NM_001159960|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chr18_-_21458623_21458645	0.932638	HOX{A6,A7,B6,B7}.p2	AK220564|Fam59a|381126|family with sequence similarity 59, member A	AK148318|Fam59a|381126|family with sequence similarity 59, member A	NM_001033445|Fam59a|381126|family with sequence similarity 59, member A
mm9_v1_chr8_-_87298118_87298267	0.932112	HOX{A6,A7,B6,B7}.p2	AK158568|Nfix|18032|nuclear factor I/X	NM_001081981|Nfix|18032|nuclear factor I/X
mm9_v1_chr15_+_103070840_103070935	0.931985	HOX{A6,A7,B6,B7}.p2	AK131999|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK136113|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK146630|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	NM_001039129|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	NM_010447|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168531|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK135391|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK152684|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK161730|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK166901|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167161|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167810|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167811|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168420|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168733|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK169216|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK007802|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK088308|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK146126|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK166989|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167820|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167913|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	M99167|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC052723|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC080675|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC092395|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC089340|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC083136|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	D86728|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	D86729|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1
mm9_v1_chr14_-_46277816_46277821	0.924046	HOX{A6,A7,B6,B7}.p2	DQ272481|Ddhd1|114874|DDHD domain containing 1	DQ272482|Ddhd1|114874|DDHD domain containing 1	NM_001039106|Ddhd1|114874|DDHD domain containing 1	NM_001042719|Ddhd1|114874|DDHD domain containing 1	NM_176845|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr13_-_81772121_81772142	0.923381	HOX{A6,A7,B6,B7}.p2	BC080679|Gpr98|110789|G protein-coupled receptor 98	AB086166|Gpr98|110789|G protein-coupled receptor 98	AB086167|Gpr98|110789|G protein-coupled receptor 98	AK053565|Gpr98|110789|G protein-coupled receptor 98	AF435926|Gpr98|110789|G protein-coupled receptor 98	NM_054053|Gpr98|110789|G protein-coupled receptor 98
mm9_v1_chr2_-_154394864_154394959	0.920807	HOX{A6,A7,B6,B7}.p2	AK220226|E2f1|13555|E2F transcription factor 1
mm9_v1_chr4_+_71862277_71862381	0.91765	HOX{A6,A7,B6,B7}.p2	AK041409|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK043880|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK053841|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083963|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK039121|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK012513|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083285|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK042990|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene
mm9_v1_chr18_+_12802276_12802325	0.917037	HOX{A6,A7,B6,B7}.p2	BC020021|Ttc39c|72747|tetratricopeptide repeat domain 39C	AK013267|Ttc39c|72747|tetratricopeptide repeat domain 39C
mm9_v1_chr7_-_149865451_149865614	0.916899	HOX{A6,A7,B6,B7}.p2	BC145554|Ins2|16334|insulin II	BC132650|Ins2|16334|insulin II	BC132652|Ins2|16334|insulin II	Z47785|Ins2|16334|insulin II	AY899305|Ins2|16334|insulin II	BC066208|Ins2|16334|insulin II	BC099934|Ins2|16334|insulin II	AK007612|Ins2|16334|insulin II	GQ915612|Ins2|16334|insulin II	NM_001185083|Ins2|16334|insulin II	NM_001185084|Ins2|16334|insulin II	NM_008387|Ins2|16334|insulin II
mm9_v1_chr9_-_64585540_64585555	0.916754	HOX{A6,A7,B6,B7}.p2	AK132072|Rab11a|53869|RAB11a, member RAS oncogene family	AK132159|Rab11a|53869|RAB11a, member RAS oncogene family	BC010722|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr4_-_88204148_88204148	0.916294	HOX{A6,A7,B6,B7}.p2	BC116216|Gm12597|242517|predicted gene 12597	NM_206870|Gm12597|242517|predicted gene 12597
mm9_v1_chr9_+_85736444_85736534	0.916047	HOX{A6,A7,B6,B7}.p2	NM_001164792|Tpbg|21983|trophoblast glycoprotein	AK165553|Tpbg|21983|trophoblast glycoprotein	BC058198|Tpbg|21983|trophoblast glycoprotein	AK143519|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr10_+_107599446_107599460	0.915858	HOX{A6,A7,B6,B7}.p2	AK004785|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_027892|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm9_v1_chr16_-_92321652_92321685	0.914747	HOX{A6,A7,B6,B7}.p2	AK029653|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	BC147584|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	BC147622|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	AK016199|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	NM_029252|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene
mm9_v1_chr10_-_126507271_126507387	0.913488	HOX{A6,A7,B6,B7}.p2	AK160269|Tspan31|67125|tetraspanin 31	BC023306|Tspan31|67125|tetraspanin 31	AK012457|Tspan31|67125|tetraspanin 31	AK014183|Tspan31|67125|tetraspanin 31	AK075962|Tspan31|67125|tetraspanin 31	NM_025982|Tspan31|67125|tetraspanin 31	AK012567|Tspan31|67125|tetraspanin 31	AK012853|Tspan31|67125|tetraspanin 31	AK013523|Tspan31|67125|tetraspanin 31
mm9_v1_chr4_-_147310804_147310884	0.912998	HOX{A6,A7,B6,B7}.p2	BC006599|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AF046782|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK131632|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK137480|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK157729|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	AK160822|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	NM_011122|Plod1|18822|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm9_v1_chr19_+_4097344_4097450	0.911444	HOX{A6,A7,B6,B7}.p2	AK012121|Cdk2ap2|52004|CDK2-associated protein 2	AK018035|Cdk2ap2|52004|CDK2-associated protein 2	NM_026373|Cdk2ap2|52004|CDK2-associated protein 2	AK003686|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr14_-_73109254_73109390	0.910195	HOX{A6,A7,B6,B7}.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr4_-_148800458_148800500	0.909493	HOX{A6,A7,B6,B7}.p2	BC067402|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr10_-_100051871_100051900	0.909337	HOX{A6,A7,B6,B7}.p2	AK160693|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK036647|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK085292|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK077761|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK078231|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	NM_175128|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene
mm9_v1_chr1_-_136201384_136201419	0.90825	HOX{A6,A7,B6,B7}.p2	AK078263|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	AK170782|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
mm9_v1_chr17_-_23810736_23810750	0.907633	HOX{A6,A7,B6,B7}.p2	BC085131|Thoc6|386612|THO complex 6 homolog (Drosophila)	NM_001008425|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr7_+_130114059_130114440	0.906673	HOX{A6,A7,B6,B7}.p2	NM_011247|Rbbp6|19647|retinoblastoma binding protein 6	NM_175023|Rbbp6|19647|retinoblastoma binding protein 6	AK081261|Rbbp6|19647|retinoblastoma binding protein 6	AK045635|Rbbp6|19647|retinoblastoma binding protein 6	BC025874|Rbbp6|19647|retinoblastoma binding protein 6
mm9_v1_chr11_+_102110161_102110288	0.90619	HOX{A6,A7,B6,B7}.p2	NM_153544|BC030867|217216|cDNA sequence BC030867	AK029811|BC030867|217216|cDNA sequence BC030867	BC030867|BC030867|217216|cDNA sequence BC030867	BC108338|BC030867|217216|cDNA sequence BC030867	BC085317|BC030867|217216|cDNA sequence BC030867
mm9_v1_chr8_-_83262881_83263070	0.90482	HOX{A6,A7,B6,B7}.p2	AF325921|Smarca5|93762|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC009130|Smarca5|93762|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AF375046|Smarca5|93762|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm9_v1_chr9_-_50554613_50554673	0.901739	HOX{A6,A7,B6,B7}.p2	AK007929|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	AK011526|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	BC027409|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	NM_025865|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	AK009541|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	AK007611|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene
mm9_v1_chr2_-_110203138_110203154	0.901165	HOX{A6,A7,B6,B7}.p2	BC027250|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK003790|Fibin|67606|fin bud initiation factor homolog (zebrafish)	NM_026271|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr12_+_17798300_17798417	0.900651	HOX{A6,A7,B6,B7}.p2	AK182967|Hpcal1|53602|hippocalcin-like 1
mm9_v1_chr14_+_55713789_55713939	0.900338	HOX{A6,A7,B6,B7}.p2	AF432864|Thtpa|105663|thiamine triphosphatase	AK085173|Thtpa|105663|thiamine triphosphatase	AK132479|Thtpa|105663|thiamine triphosphatase
mm9_v1_chr8_+_28233019_28233024	0.900032	HOX{A6,A7,B6,B7}.p2	AK020642|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr12_+_35731853_35731876	0.899879	HOX{A6,A7,B6,B7}.p2	AK154425|Snx13|217463|sorting nexin 13	NM_001014973|Snx13|217463|sorting nexin 13	AK166180|Snx13|217463|sorting nexin 13	BC067201|Snx13|217463|sorting nexin 13
mm9_v1_chr1_+_64579358_64579513	0.899284	HOX{A6,A7,B6,B7}.p2	NM_001037726|Creb1|12912|cAMP responsive element binding protein 1	NM_009952|Creb1|12912|cAMP responsive element binding protein 1	NM_133828|Creb1|12912|cAMP responsive element binding protein 1	AK079223|Creb1|12912|cAMP responsive element binding protein 1	X92497|Creb1|12912|cAMP responsive element binding protein 1	AK042595|Creb1|12912|cAMP responsive element binding protein 1	BC021649|Creb1|12912|cAMP responsive element binding protein 1	M95106|Creb1|12912|cAMP responsive element binding protein 1	AF448507|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr2_+_71367501_71367643	0.898782	HOX{A6,A7,B6,B7}.p2	NM_010053|Dlx1|13390|distal-less homeobox 1	U51001|Dlx1|13390|distal-less homeobox 1	BC079609|Dlx1|13390|distal-less homeobox 1
mm9_v1_chr16_-_63863905_63864000	0.896686	HOX{A6,A7,B6,B7}.p2	BC138641|Epha3|13837|Eph receptor A3	BC138643|Epha3|13837|Eph receptor A3	BC145349|Epha3|13837|Eph receptor A3	AK132335|Epha3|13837|Eph receptor A3	BC060164|Epha3|13837|Eph receptor A3	M68513|Epha3|13837|Eph receptor A3	M68515|Epha3|13837|Eph receptor A3	AK084921|Epha3|13837|Eph receptor A3	AK041935|Epha3|13837|Eph receptor A3	AK045219|Epha3|13837|Eph receptor A3	NM_010140|Epha3|13837|Eph receptor A3	BC093483|Epha3|13837|Eph receptor A3	AK089119|Epha3|13837|Eph receptor A3
mm9_v1_chr11_+_82202401_82202479	0.893625	HOX{A6,A7,B6,B7}.p2	NM_023438|Tmem132e|270893|transmembrane protein 132E	BC137906|Tmem132e|270893|transmembrane protein 132E	BC145026|Tmem132e|270893|transmembrane protein 132E
mm9_v1_chr2_+_106533615_106533705	0.89351	HOX{A6,A7,B6,B7}.p2	AK161666|Mpped2|77015|metallophosphoesterase domain containing 2	NM_001143683|Mpped2|77015|metallophosphoesterase domain containing 2	BC020182|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr19_+_23216035_23216244	0.892894	HOX{A6,A7,B6,B7}.p2	CT010185|Klf9|16601|Kruppel-like factor 9	Y14296|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr17_-_46683249_46683336	0.892889	HOX{A6,A7,B6,B7}.p2	AK147675|Cul9|78309|cullin 9	NM_001081335|Cul9|78309|cullin 9
mm9_v1_chr5_-_138227888_138227970	0.890307	HOX{A6,A7,B6,B7}.p2	AK154415|Mepce|231803|methylphosphate capping enzyme	NM_144913|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr19_-_28057437_28057437	0.890222	HOX{A6,A7,B6,B7}.p2	NM_001166414|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)
mm9_v1_chrX_+_159215702_159215711	0.890017	HOX{A6,A7,B6,B7}.p2	AK213484|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr6_+_50150160_50150179	0.888943	HOX{A6,A7,B6,B7}.p2	AK047380|Mpp6|56524|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm9_v1_chr5_+_23356371_23356439	0.887595	HOX{A6,A7,B6,B7}.p2	AK002390|2700038G22Rik|67194|RIKEN cDNA 2700038G22 gene
mm9_v1_chr6_-_85712469_85712473	0.887466	HOX{A6,A7,B6,B7}.p2	BC092089|Cml3|93674|camello-like 3	AF163316|Cml3|93674|camello-like 3	NM_053097|Cml3|93674|camello-like 3
mm9_v1_chr11_-_100573717_100573767	0.887006	HOX{A6,A7,B6,B7}.p2	AF254441|Kat2a|14534|K(lysine) acetyltransferase 2A	AK147042|Kat2a|14534|K(lysine) acetyltransferase 2A	AK150225|Kat2a|14534|K(lysine) acetyltransferase 2A	AK137358|Kat2a|14534|K(lysine) acetyltransferase 2A	AK155347|Kat2a|14534|K(lysine) acetyltransferase 2A	BC051952|Kat2a|14534|K(lysine) acetyltransferase 2A	BC060050|Kat2a|14534|K(lysine) acetyltransferase 2A	BC063752|Kat2a|14534|K(lysine) acetyltransferase 2A	AK145205|Kat2a|14534|K(lysine) acetyltransferase 2A	AK154866|Kat2a|14534|K(lysine) acetyltransferase 2A	AK158079|Kat2a|14534|K(lysine) acetyltransferase 2A
mm9_v1_chr7_-_125263314_125263384	0.884911	HOX{A6,A7,B6,B7}.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr2_-_26761162_26761187	0.884434	HOX{A6,A7,B6,B7}.p2	AK207179|Med22|20933|mediator complex subunit 22	AK191222|Med22|20933|mediator complex subunit 22
mm9_v1_chr10_+_128143313_128143342	0.884415	HOX{A6,A7,B6,B7}.p2	AK012808|Pmel|20431|premelanosome protein	AK131956|Pmel|20431|premelanosome protein	NM_021882|Pmel|20431|premelanosome protein	BC075667|Pmel|20431|premelanosome protein	BC082555|Pmel|20431|premelanosome protein	U14133|Pmel|20431|premelanosome protein
mm9_v1_chr2_-_155979971_155980032	0.883468	HOX{A6,A7,B6,B7}.p2	AK046526|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr11_+_96891242_96891268	0.880636	HOX{A6,A7,B6,B7}.p2	NM_146027|Scrn2|217140|secernin 2
mm9_v1_chr12_+_35731926_35731945	0.880297	HOX{A6,A7,B6,B7}.p2	AK164161|Snx13|217463|sorting nexin 13
mm9_v1_chr12_+_81216835_81216867	0.879404	HOX{A6,A7,B6,B7}.p2	AK040614|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene	AK005005|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene
mm9_v1_chr4_-_34136995_34137041	0.878224	HOX{A6,A7,B6,B7}.p2	AK007270|Spaca1|67652|sperm acrosome associated 1	AK016011|Spaca1|67652|sperm acrosome associated 1	BC147079|Spaca1|67652|sperm acrosome associated 1	BC147080|Spaca1|67652|sperm acrosome associated 1	AK006187|Spaca1|67652|sperm acrosome associated 1	NM_026293|Spaca1|67652|sperm acrosome associated 1
mm9_v1_chr7_-_11896030_11896030	0.877789	HOX{A6,A7,B6,B7}.p2	NM_001161802|Zscan4e|665848|zinc finger and SCAN domain containing 4E
mm9_v1_chr16_+_42955690_42955696	0.877246	HOX{A6,A7,B6,B7}.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene
mm9_v1_chr1_-_165242744_165242943	0.875154	HOX{A6,A7,B6,B7}.p2	AK031075|Prrx1|18933|paired related homeobox 1	AB221686|Prrx1|18933|paired related homeobox 1	X59725|Prrx1|18933|paired related homeobox 1	L06502|Prrx1|18933|paired related homeobox 1
mm9_v1_chr4_+_21774729_21774865	0.874479	HOX{A6,A7,B6,B7}.p2	NM_025669|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC141031|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr5_+_34967936_34968062	0.869873	HOX{A6,A7,B6,B7}.p2	AK207405|Add1|11518|adducin 1 (alpha)	AK215011|Add1|11518|adducin 1 (alpha)
mm9_v1_chr11_+_23978110_23978267	0.868269	HOX{A6,A7,B6,B7}.p2	AK140949|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF051525|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169036|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169037|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK122557|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF186018|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK004395|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK043677|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	BC051418|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr14_+_37868015_37868020	0.867719	HOX{A6,A7,B6,B7}.p2	AK044631|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	NM_146245|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	BC032270|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm9_v1_chr5_-_137969610_137969651	0.867715	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_35070627_35070627	0.860742	HOX{A6,A7,B6,B7}.p2	AK076994|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene	NM_172741|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr19_+_34082779_34082838	0.859031	HOX{A6,A7,B6,B7}.p2	AK037106|Lipk|240633|lipase, family member K	NM_172837|Lipk|240633|lipase, family member K	BC055815|Lipk|240633|lipase, family member K	AK162706|Lipk|240633|lipase, family member K	BC037229|Lipk|240633|lipase, family member K
mm9_v1_chr1_-_65119965_65120107	0.857956	HOX{A6,A7,B6,B7}.p2	M64544|Crygc|12966|crystallin, gamma C	NM_007775|Crygc|12966|crystallin, gamma C	BC056454|Crygc|12966|crystallin, gamma C	EF426301|Crygc|12966|crystallin, gamma C	EF426302|Crygc|12966|crystallin, gamma C	NM_001082573|Crygc|12966|crystallin, gamma C
mm9_v1_chr7_+_100023762_100023966	0.857302	HOX{A6,A7,B6,B7}.p2	NM_028243|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011112|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK051677|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK166282|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011816|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC089575|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK054462|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC055022|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC026424|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)
mm9_v1_chr3_+_105508375_105508375	0.85513	HOX{A6,A7,B6,B7}.p2	AK078368|6530418L21Rik|109050|RIKEN cDNA 6530418L21 gene	NM_001163356|6530418L21Rik|109050|RIKEN cDNA 6530418L21 gene
mm9_v1_chr14_-_79881316_79881354	0.854384	HOX{A6,A7,B6,B7}.p2	AK159522|Wbp4|22380|WW domain binding protein 4
mm9_v1_chr1_-_192802869_192802928	0.853852	HOX{A6,A7,B6,B7}.p2	AK140989|Vash2|226841|vasohibin 2	NM_144879|Vash2|226841|vasohibin 2
mm9_v1_chr10_+_127525425_127525449	0.853226	HOX{A6,A7,B6,B7}.p2	AK003460|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr13_+_23962141_23962200	0.852957	HOX{A6,A7,B6,B7}.p2	NM_001170638|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	NM_009198|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AF361761|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AK164712|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	X77241|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	BC013445|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1
mm9_v1_chr7_+_51036423_51036448	0.852168	HOX{A6,A7,B6,B7}.p2	NM_133712|Klk10|69540|kallikrein related-peptidase 10	AK009000|Klk10|69540|kallikrein related-peptidase 10	BC002100|Klk10|69540|kallikrein related-peptidase 10
mm9_v1_chr9_-_109987245_109987321	0.851108	HOX{A6,A7,B6,B7}.p2	AK202261|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr19_-_5801766_5801972	0.850693	HOX{A6,A7,B6,B7}.p2	BC094333|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC039749|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC004722|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr10_+_21713735_21713756	0.850368	HOX{A6,A7,B6,B7}.p2	AK132234|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr4_+_94405963_94405990	0.849456	HOX{A6,A7,B6,B7}.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr7_+_52973440_52973511	0.848676	HOX{A6,A7,B6,B7}.p2	AK145649|Rpl18|19899|ribosomal protein L18	NM_009077|Rpl18|19899|ribosomal protein L18	AK007263|Rpl18|19899|ribosomal protein L18	AK151667|Rpl18|19899|ribosomal protein L18	AK166803|Rpl18|19899|ribosomal protein L18	AK010510|Rpl18|19899|ribosomal protein L18	AK012580|Rpl18|19899|ribosomal protein L18	AK153172|Rpl18|19899|ribosomal protein L18	AK169659|Rpl18|19899|ribosomal protein L18	AK168288|Rpl18|19899|ribosomal protein L18	AK009044|Rpl18|19899|ribosomal protein L18	BC081468|Rpl18|19899|ribosomal protein L18	BC082290|Rpl18|19899|ribosomal protein L18	L04128|Rpl18|19899|ribosomal protein L18	BC091732|Rpl18|19899|ribosomal protein L18
mm9_v1_chr11_+_3102997_3103023	0.848176	HOX{A6,A7,B6,B7}.p2	AK165678|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	NM_001166547|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	NM_001166549|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK128990|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr16_+_78931369_78931521	0.84675	HOX{A6,A7,B6,B7}.p2	AF311699|Chodl|246048|chondrolectin	AK014255|Chodl|246048|chondrolectin	BC117071|Chodl|246048|chondrolectin	BC117073|Chodl|246048|chondrolectin	BC144738|Chodl|246048|chondrolectin
mm9_v1_chrX_-_163647057_163647080	0.845632	HOX{A6,A7,B6,B7}.p2	BC018286|Tmsb4x|19241|thymosin, beta 4, X chromosome	X16053|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr17_+_46818005_46818130	0.844903	HOX{A6,A7,B6,B7}.p2	AK010863|Mea1|17256|male enhanced antigen 1	AK008305|Mea1|17256|male enhanced antigen 1	AK008194|Mea1|17256|male enhanced antigen 1	AK010904|Mea1|17256|male enhanced antigen 1	AK010962|Mea1|17256|male enhanced antigen 1	AK012617|Mea1|17256|male enhanced antigen 1	AK005369|Mea1|17256|male enhanced antigen 1	AK005106|Mea1|17256|male enhanced antigen 1	L10401|Mea1|17256|male enhanced antigen 1	M27938|Mea1|17256|male enhanced antigen 1	NM_010787|Mea1|17256|male enhanced antigen 1	AK011189|Mea1|17256|male enhanced antigen 1	D17341|Mea1|17256|male enhanced antigen 1
mm9_v1_chr2_+_22477837_22477846	0.842722	HOX{A6,A7,B6,B7}.p2	D42051|Gad2|14417|glutamic acid decarboxylase 2	NM_008078|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr14_-_70205351_70205356	0.84269	HOX{A6,A7,B6,B7}.p2	AK021405|Rhobtb2|246710|Rho-related BTB domain containing 2	NM_153514|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr6_-_97262013_97262028	0.842557	HOX{A6,A7,B6,B7}.p2	BC058262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr7_+_129210847_129210947	0.839846	HOX{A6,A7,B6,B7}.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr1_-_186823350_186823427	0.839465	HOX{A6,A7,B6,B7}.p2	AB185282|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	BC112400|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	AF453686|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	NM_145515|Mark1|226778|MAP/microtubule affinity-regulating kinase 1
mm9_v1_chr17_+_41097513_41097693	0.836578	HOX{A6,A7,B6,B7}.p2	AK029425|Mut|17850|methylmalonyl-Coenzyme A mutase	AK012766|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr2_+_164648185_164648185	0.835537	HOX{A6,A7,B6,B7}.p2	BC046831|Zswim1|71971|zinc finger, SWIM domain containing 1	NM_028028|Zswim1|71971|zinc finger, SWIM domain containing 1
mm9_v1_chr14_+_68334154_68334168	0.835076	HOX{A6,A7,B6,B7}.p2	AK158922|Kctd9|105440|potassium channel tetramerisation domain containing 9	NM_001111028|Kctd9|105440|potassium channel tetramerisation domain containing 9	NM_134073|Kctd9|105440|potassium channel tetramerisation domain containing 9
mm9_v1_chr2_+_30122046_30122048	0.833823	HOX{A6,A7,B6,B7}.p2	AK138607|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr6_+_129483295_129483425	0.832871	HOX{A6,A7,B6,B7}.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr11_+_20124648_20124793	0.832481	HOX{A6,A7,B6,B7}.p2	AK207850|Rab1|19324|RAB1, member RAS oncogene family	AK215283|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr13_-_17896909_17896930	0.83036	HOX{A6,A7,B6,B7}.p2	AK173265|Cdk13|69562|cyclin-dependent kinase 13	NM_001081058|Cdk13|69562|cyclin-dependent kinase 13	NM_027118|Cdk13|69562|cyclin-dependent kinase 13
mm9_v1_chr5_-_135096100_135096123	0.828622	HOX{A6,A7,B6,B7}.p2	BC023227|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr18_+_37906668_37906697	0.827281	HOX{A6,A7,B6,B7}.p2	BC035540|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr5_-_123183255_123183351	0.82709	HOX{A6,A7,B6,B7}.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr2_-_32208737_32208880	0.82703	HOX{A6,A7,B6,B7}.p2	L31395|Dnm1|13429|dynamin 1	BC058623|Dnm1|13429|dynamin 1	L31397|Dnm1|13429|dynamin 1	AK220483|Dnm1|13429|dynamin 1	AK144142|Dnm1|13429|dynamin 1	BC034679|Dnm1|13429|dynamin 1	AK011651|Dnm1|13429|dynamin 1	NM_010065|Dnm1|13429|dynamin 1
mm9_v1_chr10_-_80170504_80170531	0.826135	HOX{A6,A7,B6,B7}.p2	AK205331|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr15_-_53734033_53734098	0.825642	HOX{A6,A7,B6,B7}.p2	AK032588|Samd12|320679|sterile alpha motif domain containing 12	AK080536|Samd12|320679|sterile alpha motif domain containing 12
mm9_v1_chr18_-_24762236_24762282	0.824817	HOX{A6,A7,B6,B7}.p2	AK028976|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr6_-_85770936_85770965	0.822124	HOX{A6,A7,B6,B7}.p2	BC024605|Cml5|69049|camello-like 5	BC014696|Cml3|93674|camello-like 3	AK007530|Cml5|69049|camello-like 5	NM_023493|Cml5|69049|camello-like 5
mm9_v1_chrX_-_133278223_133278228	0.821964	HOX{A6,A7,B6,B7}.p2	AK161610|Morf4l2|56397|mortality factor 4 like 2	AK166637|Morf4l2|56397|mortality factor 4 like 2	NM_001168228|Morf4l2|56397|mortality factor 4 like 2	NM_001168230|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr11_+_59953583_59953674	0.820266	HOX{A6,A7,B6,B7}.p2	NM_001037764|Rai1|19377|retinoic acid induced 1	AY548172|Rai1|19377|retinoic acid induced 1	D29801|Rai1|19377|retinoic acid induced 1
mm9_v1_chr2_-_92241357_92241532	0.819436	HOX{A6,A7,B6,B7}.p2	AF003115|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	AF054611|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1	NM_011162|Mapk8ip1|19099|mitogen-activated protein kinase 8 interacting protein 1
mm9_v1_chr11_+_120353150_120353163	0.819124	HOX{A6,A7,B6,B7}.p2	AK151645|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	NM_013770|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10
mm9_v1_chrX_+_93651684_93651766	0.819049	HOX{A6,A7,B6,B7}.p2	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr17_-_35975075_35975143	0.818761	HOX{A6,A7,B6,B7}.p2	X04663|Tubb5|22154|tubulin, beta 5
mm9_v1_chr18_+_37911236_37911432	0.818567	HOX{A6,A7,B6,B7}.p2	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr3_-_105746740_105746751	0.816098	HOX{A6,A7,B6,B7}.p2	AK215505|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr6_-_30459703_30459756	0.815888	HOX{A6,A7,B6,B7}.p2	AK089486|Tmem209|72649|transmembrane protein 209	AK170465|Tmem209|72649|transmembrane protein 209	BC057109|Tmem209|72649|transmembrane protein 209	NM_178625|Tmem209|72649|transmembrane protein 209	BC052187|Tmem209|72649|transmembrane protein 209	AK029366|Tmem209|72649|transmembrane protein 209	AK089962|Tmem209|72649|transmembrane protein 209	AK078544|Tmem209|72649|transmembrane protein 209	AK044877|Tmem209|72649|transmembrane protein 209	AK084222|Tmem209|72649|transmembrane protein 209
mm9_v1_chr11_-_40562196_40562300	0.814646	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_37454493_37454629	0.813417	HOX{A6,A7,B6,B7}.p2	NM_053127|Pcdhb2|93873|protocadherin beta 2	BC021789|Pcdhb2|93873|protocadherin beta 2	BC141154|Pcdhb2|93873|protocadherin beta 2	AY013781|Pcdhb2|93873|protocadherin beta 2
mm9_v1_chr18_-_53904193_53904270	0.813149	HOX{A6,A7,B6,B7}.p2	AK044952|Cep120|225523|centrosomal protein 120	BC053439|Cep120|225523|centrosomal protein 120	NM_178686|Cep120|225523|centrosomal protein 120	AK089236|Cep120|225523|centrosomal protein 120	AK089242|Cep120|225523|centrosomal protein 120	AK044808|Cep120|225523|centrosomal protein 120	AK079319|Cep120|225523|centrosomal protein 120	AK047594|Cep120|225523|centrosomal protein 120	AK038916|Cep120|225523|centrosomal protein 120
mm9_v1_chr19_+_44368165_44368165	0.812943	HOX{A6,A7,B6,B7}.p2	AK147406|Scd2|20250|stearoyl-Coenzyme A desaturase 2	NM_009128|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chrX_+_71372802_71372832	0.812259	HOX{A6,A7,B6,B7}.p2	AF190672|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	AK149287|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	NM_008106|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	BC014826|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	AF011389|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
mm9_v1_chr8_-_116372376_116372514	0.812138	HOX{A6,A7,B6,B7}.p2	BC094674|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK140876|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm9_v1_chr12_-_8506790_8506819	0.811672	HOX{A6,A7,B6,B7}.p2	BC018275|Rhob|11852|ras homolog gene family, member B	NM_007483|Rhob|11852|ras homolog gene family, member B	BC110992|Rhob|11852|ras homolog gene family, member B	AK167917|Rhob|11852|ras homolog gene family, member B	AK086873|Rhob|11852|ras homolog gene family, member B	AK164518|Rhob|11852|ras homolog gene family, member B
mm9_v1_chr16_+_90386256_90386261	0.810584	HOX{A6,A7,B6,B7}.p2	AK147425|Hunk|26559|hormonally upregulated Neu-associated kinase
mm9_v1_chr11_-_102440432_102440463	0.809077	HOX{A6,A7,B6,B7}.p2	AK144330|Gm11627|100040792|predicted gene 11627
mm9_v1_chr5_+_138526303_138526341	0.808881	HOX{A6,A7,B6,B7}.p2	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr2_+_120802698_120802797	0.808472	HOX{A6,A7,B6,B7}.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr5_+_122822505_122822541	0.806508	HOX{A6,A7,B6,B7}.p2	BC003341|Gpn3|68080|GPN-loop GTPase 3	NM_024216|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr12_-_15823590_15823683	0.806329	HOX{A6,A7,B6,B7}.p2	NM_144551|Trib2|217410|tribbles homolog 2 (Drosophila)	AK144192|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr6_-_122692407_122692520	0.805489	HOX{A6,A7,B6,B7}.p2	CT010354|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	M75135|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	X61093|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC050095|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK155997|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC034122|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC058811|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr13_+_91600662_91600791	0.804659	HOX{A6,A7,B6,B7}.p2	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr7_-_137409721_137409804	0.804583	HOX{A6,A7,B6,B7}.p2	BC065069|Fgfr2|14183|fibroblast growth factor receptor 2	X55441|Fgfr2|14183|fibroblast growth factor receptor 2	BC072640|Fgfr2|14183|fibroblast growth factor receptor 2	M63503|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr18_-_20273110_20273273	0.804162	HOX{A6,A7,B6,B7}.p2	BC109161|Dsc1|13505|desmocollin 1	BC109162|Dsc1|13505|desmocollin 1	AK036893|Dsc1|13505|desmocollin 1	AK081826|Dsc1|13505|desmocollin 1	X97986|Dsc1|13505|desmocollin 1	AK079441|Dsc1|13505|desmocollin 1	NM_013504|Dsc1|13505|desmocollin 1
mm9_v1_chr9_+_50425460_50425487	0.80369	HOX{A6,A7,B6,B7}.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr4_+_118906433_118906436	0.802771	HOX{A6,A7,B6,B7}.p2	NM_001042411|Lepre1|56401|leprecan 1	AK159505|Lepre1|56401|leprecan 1
mm9_v1_chr3_+_13471643_13471656	0.802659	HOX{A6,A7,B6,B7}.p2	NM_001163328|Ralyl|76897|RALY RNA binding protein-like	NM_178631|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr3_+_95087190_95087293	0.801138	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr8_-_25707414_25707480	0.800561	HOX{A6,A7,B6,B7}.p2	BC049931|Ido1|15930|indoleamine 2,3-dioxygenase 1	M69109|Ido1|15930|indoleamine 2,3-dioxygenase 1	NM_008324|Ido1|15930|indoleamine 2,3-dioxygenase 1
mm9_v1_chr2_+_121282841_121282867	0.799579	HOX{A6,A7,B6,B7}.p2	AK168506|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC021588|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr7_+_129210954_129210978	0.799369	HOX{A6,A7,B6,B7}.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr18_+_78016353_78016381	0.799291	HOX{A6,A7,B6,B7}.p2	AK164193|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr13_+_40982534_40982735	0.79848	HOX{A6,A7,B6,B7}.p2	NM_008105|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK080061|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK054226|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AB037597|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435149|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr1_+_58504476_58504476	0.798215	HOX{A6,A7,B6,B7}.p2	BC065163|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)	NM_022988|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)
mm9_v1_chr3_-_115832278_115832299	0.797341	HOX{A6,A7,B6,B7}.p2	CT010373|Vcam1|22329|vascular cell adhesion molecule 1	X67783|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr3_-_107135939_107136206	0.795573	HOX{A6,A7,B6,B7}.p2	BC080828|Rbm15|229700|RNA binding motif protein 15	AK048987|Rbm15|229700|RNA binding motif protein 15	BC051409|Rbm15|229700|RNA binding motif protein 15	AK168242|Rbm15|229700|RNA binding motif protein 15	AK166271|Rbm15|229700|RNA binding motif protein 15	BC057038|Rbm15|229700|RNA binding motif protein 15	AK220162|Rbm15|229700|RNA binding motif protein 15	AK168936|Rbm15|229700|RNA binding motif protein 15	BC120590|Rbm15|229700|RNA binding motif protein 15	BC137741|Rbm15|229700|RNA binding motif protein 15	NM_001045807|Rbm15|229700|RNA binding motif protein 15
mm9_v1_chr1_+_64579559_64579575	0.795212	HOX{A6,A7,B6,B7}.p2	AK044992|Creb1|12912|cAMP responsive element binding protein 1	AK044993|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr9_-_75238110_75238135	0.793912	HOX{A6,A7,B6,B7}.p2	BC024684|Mapk6|50772|mitogen-activated protein kinase 6
mm9_v1_chr8_+_26830480_26830683	0.793527	HOX{A6,A7,B6,B7}.p2	NM_028000|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC023111|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK144593|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC089556|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC062173|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK009455|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC099489|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr16_+_13829111_13829121	0.792832	HOX{A6,A7,B6,B7}.p2	AK207258|Ntan1|18203|N-terminal Asn amidase
mm9_v1_chr14_+_55094936_55095066	0.790324	HOX{A6,A7,B6,B7}.p2	AK090165|Rem2|140743|rad and gem related GTP binding protein 2	NM_080726|Rem2|140743|rad and gem related GTP binding protein 2	AK077317|Rem2|140743|rad and gem related GTP binding protein 2	BC018219|Rem2|140743|rad and gem related GTP binding protein 2
mm9_v1_chr19_+_25073995_25074066	0.79011	HOX{A6,A7,B6,B7}.p2	AK050543|Dock8|76088|dedicator of cytokinesis 8	NM_028785|Dock8|76088|dedicator of cytokinesis 8	BC141358|Dock8|76088|dedicator of cytokinesis 8	AK170538|Dock8|76088|dedicator of cytokinesis 8
mm9_v1_chrX_+_131120189_131120255	0.789474	HOX{A6,A7,B6,B7}.p2	NM_019865|Rpl36a|19982|ribosomal protein L36A	AK002540|Rpl36a|19982|ribosomal protein L36A	AK170127|Rpl36a|19982|ribosomal protein L36A	AK168535|Rpl36a|19982|ribosomal protein L36A	AK012502|Rpl36a|19982|ribosomal protein L36A	AK164483|Rpl36a|19982|ribosomal protein L36A	BC027515|Rpl36a|19982|ribosomal protein L36A	BC086777|Rpl36a|19982|ribosomal protein L36A
mm9_v1_chr11_+_19824417_19824473	0.788038	HOX{A6,A7,B6,B7}.p2	AK153700|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK036430|Spred2|114716|sprouty-related, EVH1 domain containing 2	NM_033523|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK157817|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr1_+_72353980_72354076	0.786573	HOX{A6,A7,B6,B7}.p2	AK081633|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	NM_009533|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK089944|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK165470|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK084263|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC051660|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr11_-_101286641_101286646	0.786198	HOX{A6,A7,B6,B7}.p2	AK007198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	NM_026865|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr1_+_122237151_122237184	0.786002	HOX{A6,A7,B6,B7}.p2	AK144471|C1ql2|226359|complement component 1, q subcomponent-like 2	BC040774|C1ql2|226359|complement component 1, q subcomponent-like 2	NM_207233|C1ql2|226359|complement component 1, q subcomponent-like 2
mm9_v1_chr12_+_31950252_31950264	0.785828	HOX{A6,A7,B6,B7}.p2	M15525|Lamb1|16777|laminin B1	BC121790|Lamb1|16777|laminin B1
mm9_v1_chr10_-_86956393_86956406	0.78375	HOX{A6,A7,B6,B7}.p2	AK141866|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	AK143210|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	NM_008553|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)
mm9_v1_chr4_-_9570815_9570863	0.783291	HOX{A6,A7,B6,B7}.p2	AF302654|Asph|65973|aspartate-beta-hydroxylase	AF289490|Asph|65973|aspartate-beta-hydroxylase	AF289491|Asph|65973|aspartate-beta-hydroxylase	AF289492|Asph|65973|aspartate-beta-hydroxylase	AF221854|Asph|65973|aspartate-beta-hydroxylase	AF223413|Asph|65973|aspartate-beta-hydroxylase	NM_001177852|Asph|65973|aspartate-beta-hydroxylase	NM_001177853|Asph|65973|aspartate-beta-hydroxylase	NM_001177854|Asph|65973|aspartate-beta-hydroxylase	NM_133723|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr6_-_131338465_131338473	0.783106	HOX{A6,A7,B6,B7}.p2	BC027785|Csda|56449|cold shock domain protein A	NM_011733|Csda|56449|cold shock domain protein A	NM_139117|Csda|56449|cold shock domain protein A
mm9_v1_chr16_+_90386629_90386722	0.781487	HOX{A6,A7,B6,B7}.p2	AF167987|Hunk|26559|hormonally upregulated Neu-associated kinase	AF055919|Hunk|26559|hormonally upregulated Neu-associated kinase	NM_015755|Hunk|26559|hormonally upregulated Neu-associated kinase	AK144639|Hunk|26559|hormonally upregulated Neu-associated kinase
mm9_v1_chr19_+_7016333_7016409	0.780671	HOX{A6,A7,B6,B7}.p2	NM_007522|Bad|12015|BCL2-associated agonist of cell death	L37296|Bad|12015|BCL2-associated agonist of cell death	BC006762|Bad|12015|BCL2-associated agonist of cell death
mm9_v1_chr1_-_63776891_63776891	0.780569	HOX{A6,A7,B6,B7}.p2	BC050786|Mdh1b|76668|malate dehydrogenase 1B, NAD (soluble)	NM_029696|Mdh1b|76668|malate dehydrogenase 1B, NAD (soluble)
mm9_v1_chr11_-_42134509_42134538	0.779552	HOX{A6,A7,B6,B7}.p2	X51986|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr5_+_122822549_122822598	0.779167	HOX{A6,A7,B6,B7}.p2	AK087968|Gpn3|68080|GPN-loop GTPase 3	AK080720|Gpn3|68080|GPN-loop GTPase 3	AK146783|Gpn3|68080|GPN-loop GTPase 3	AK016996|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr7_+_31017305_31017379	0.779088	HOX{A6,A7,B6,B7}.p2	AK012635|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I	AB221537|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I
mm9_v1_chr1_-_121891786_121891786	0.777605	HOX{A6,A7,B6,B7}.p2	EF632061|Gm101|226356|predicted gene 101	NM_001115074|Gm101|226356|predicted gene 101
mm9_v1_chr15_-_35867884_35867894	0.777391	HOX{A6,A7,B6,B7}.p2	BC094413|Cox6c|12864|cytochrome c oxidase, subunit VIc
mm9_v1_chr1_+_174628164_174628196	0.776016	HOX{A6,A7,B6,B7}.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr2_+_169459145_169459258	0.775751	HOX{A6,A7,B6,B7}.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr19_-_9003845_9003845	0.775407	HOX{A6,A7,B6,B7}.p2	AK133529|Rom1|19881|rod outer segment membrane protein 1	NM_009073|Rom1|19881|rod outer segment membrane protein 1
mm9_v1_chr6_-_52195743_52195808	0.774595	HOX{A6,A7,B6,B7}.p2	BC119302|Hoxa11|15396|homeobox A11	U20370|Hoxa11|15396|homeobox A11	NM_010450|Hoxa11|15396|homeobox A11	BC052232|Hoxa11|15396|homeobox A11	AK133481|Hoxa11|15396|homeobox A11
mm9_v1_chr2_-_62411970_62412077	0.774419	HOX{A6,A7,B6,B7}.p2	BC019190|Fap|14089|fibroblast activation protein	AK051959|Fap|14089|fibroblast activation protein	NM_007986|Fap|14089|fibroblast activation protein	Y10007|Fap|14089|fibroblast activation protein
mm9_v1_chr14_+_8930682_8930828	0.772311	HOX{A6,A7,B6,B7}.p2	AK150660|Pxk|218699|PX domain containing serine/threonine kinase	AK147037|Pxk|218699|PX domain containing serine/threonine kinase	AK172463|Pxk|218699|PX domain containing serine/threonine kinase	NM_145458|Pxk|218699|PX domain containing serine/threonine kinase	NM_178279|Pxk|218699|PX domain containing serine/threonine kinase	AK170361|Pxk|218699|PX domain containing serine/threonine kinase	AK157364|Pxk|218699|PX domain containing serine/threonine kinase	AK150337|Pxk|218699|PX domain containing serine/threonine kinase	AK150413|Pxk|218699|PX domain containing serine/threonine kinase	BC016131|Pxk|218699|PX domain containing serine/threonine kinase	AK156146|Pxk|218699|PX domain containing serine/threonine kinase	AK169565|Pxk|218699|PX domain containing serine/threonine kinase	AK048910|Pxk|218699|PX domain containing serine/threonine kinase	AK151098|Pxk|218699|PX domain containing serine/threonine kinase	AK152058|Pxk|218699|PX domain containing serine/threonine kinase	AK152789|Pxk|218699|PX domain containing serine/threonine kinase	AK153067|Pxk|218699|PX domain containing serine/threonine kinase	AK169112|Pxk|218699|PX domain containing serine/threonine kinase	AK028501|Pxk|218699|PX domain containing serine/threonine kinase	AK172347|Pxk|218699|PX domain containing serine/threonine kinase	AK166036|Pxk|218699|PX domain containing serine/threonine kinase	DQ095196|Pxk|218699|PX domain containing serine/threonine kinase	DQ095197|Pxk|218699|PX domain containing serine/threonine kinase
mm9_v1_chr5_-_135096236_135096321	0.771965	HOX{A6,A7,B6,B7}.p2	AK202900|Eif4h|22384|eukaryotic translation initiation factor 4H	AK197136|Eif4h|22384|eukaryotic translation initiation factor 4H	AK192982|Eif4h|22384|eukaryotic translation initiation factor 4H	AK200162|Eif4h|22384|eukaryotic translation initiation factor 4H	AK195162|Eif4h|22384|eukaryotic translation initiation factor 4H	AK191422|Eif4h|22384|eukaryotic translation initiation factor 4H	AK191093|Eif4h|22384|eukaryotic translation initiation factor 4H	AK192082|Eif4h|22384|eukaryotic translation initiation factor 4H	AK194320|Eif4h|22384|eukaryotic translation initiation factor 4H	AK195976|Eif4h|22384|eukaryotic translation initiation factor 4H	AK197414|Eif4h|22384|eukaryotic translation initiation factor 4H	AK202850|Eif4h|22384|eukaryotic translation initiation factor 4H	AK204156|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr11_-_109159357_109159494	0.771919	HOX{A6,A7,B6,B7}.p2	BC129899|Rgs9|19739|regulator of G-protein signaling 9	BC129898|Rgs9|19739|regulator of G-protein signaling 9	AF011358|Rgs9|19739|regulator of G-protein signaling 9	AK138159|Rgs9|19739|regulator of G-protein signaling 9	AK085443|Rgs9|19739|regulator of G-protein signaling 9	AF125046|Rgs9|19739|regulator of G-protein signaling 9	AK164961|Rgs9|19739|regulator of G-protein signaling 9	NM_001165934|Rgs9|19739|regulator of G-protein signaling 9	NM_011268|Rgs9|19739|regulator of G-protein signaling 9
mm9_v1_chr11_+_61022240_61022343	0.770482	HOX{A6,A7,B6,B7}.p2	AK144241|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	NM_001112725|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	NM_007436|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	U12785|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	AF072815|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	BC144946|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	BC150677|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1
mm9_v1_chr2_+_30122256_30122418	0.770074	HOX{A6,A7,B6,B7}.p2	BC039982|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	AK046118|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr11_+_97547236_97547285	0.769624	HOX{A6,A7,B6,B7}.p2	NM_001085500|Cisd3|217149|CDGSH iron sulfur domain 3	BC056217|Cisd3|217149|CDGSH iron sulfur domain 3
mm9_v1_chr4_-_44180323_44180519	0.769333	HOX{A6,A7,B6,B7}.p2	BC062976|Rnf38|73469|ring finger protein 38	BC060730|Rnf38|73469|ring finger protein 38	NM_175201|Rnf38|73469|ring finger protein 38	AK006888|Rnf38|73469|ring finger protein 38
mm9_v1_chr3_+_86028611_86028623	0.76882	HOX{A6,A7,B6,B7}.p2	AF187731|Lrba|80877|LPS-responsive beige-like anchor	AF188506|Lrba|80877|LPS-responsive beige-like anchor	AF188507|Lrba|80877|LPS-responsive beige-like anchor	NM_001077687|Lrba|80877|LPS-responsive beige-like anchor	NM_001077688|Lrba|80877|LPS-responsive beige-like anchor	NM_030695|Lrba|80877|LPS-responsive beige-like anchor	AK085208|Lrba|80877|LPS-responsive beige-like anchor
mm9_v1_chr4_-_108790578_108790640	0.767174	HOX{A6,A7,B6,B7}.p2	BC089163|Osbpl9|100273|oxysterol binding protein-like 9	AK035658|Osbpl9|100273|oxysterol binding protein-like 9	AK172010|Osbpl9|100273|oxysterol binding protein-like 9	NM_001134791|Osbpl9|100273|oxysterol binding protein-like 9	NM_173350|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr10_-_128258639_128258702	0.765562	HOX{A6,A7,B6,B7}.p2	AK002824|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK002583|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK013455|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	BC002146|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	NM_024180|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)
mm9_v1_chr4_-_41464365_41464365	0.763576	HOX{A6,A7,B6,B7}.p2	AB231294|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene	NM_001048005|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene
mm9_v1_chr9_+_44048807_44048916	0.763179	HOX{A6,A7,B6,B7}.p2	BC038167|Ccdc153|270150|coiled-coil domain containing 153
mm9_v1_chr5_-_135095885_135095904	0.762444	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_48572811_48572818	0.761607	HOX{A6,A7,B6,B7}.p2	BC028651|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr10_+_94039007_94039007	0.761524	HOX{A6,A7,B6,B7}.p2	NM_177026|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr9_-_103118185_103118198	0.760932	HOX{A6,A7,B6,B7}.p2	M23016|Trf|22041|transferrin
mm9_v1_chr10_-_112363848_112364044	0.760785	HOX{A6,A7,B6,B7}.p2	AK078766|Atxn7l3b|382423|ataxin 7-like 3B	AK051537|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr13_-_106084378_106084564	0.759894	HOX{A6,A7,B6,B7}.p2	AK157911|Rnf180|71816|ring finger protein 180	AK032259|Rnf180|71816|ring finger protein 180	AK151379|Rnf180|71816|ring finger protein 180	AK152404|Rnf180|71816|ring finger protein 180	BC046775|Rnf180|71816|ring finger protein 180	BC075700|Rnf180|71816|ring finger protein 180
mm9_v1_chr10_+_88194103_88194147	0.759679	HOX{A6,A7,B6,B7}.p2	AK088330|Arl1|104303|ADP-ribosylation factor-like 1	AK009226|Arl1|104303|ADP-ribosylation factor-like 1	BC116894|Arl1|104303|ADP-ribosylation factor-like 1	BC116896|Arl1|104303|ADP-ribosylation factor-like 1
mm9_v1_chr3_+_40603872_40603975	0.759412	HOX{A6,A7,B6,B7}.p2	NM_011495|Plk4|20873|polo-like kinase 4 (Drosophila)	AK045082|Plk4|20873|polo-like kinase 4 (Drosophila)	AK137080|Plk4|20873|polo-like kinase 4 (Drosophila)	AK137471|Plk4|20873|polo-like kinase 4 (Drosophila)	AK164465|Plk4|20873|polo-like kinase 4 (Drosophila)	AK006827|Plk4|20873|polo-like kinase 4 (Drosophila)	L29479|Plk4|20873|polo-like kinase 4 (Drosophila)	L29480|Plk4|20873|polo-like kinase 4 (Drosophila)	BC026785|Plk4|20873|polo-like kinase 4 (Drosophila)	BC057940|Plk4|20873|polo-like kinase 4 (Drosophila)
mm9_v1_chr12_+_35731888_35731920	0.759054	HOX{A6,A7,B6,B7}.p2	AK148157|Snx13|217463|sorting nexin 13	AK170737|Snx13|217463|sorting nexin 13	BC056394|Snx13|217463|sorting nexin 13
mm9_v1_chr6_-_146450399_146450533	0.758544	HOX{A6,A7,B6,B7}.p2	AB012393|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	GU980658|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	AB182288|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	AB182290|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	NM_010586|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	NM_019923|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2
mm9_v1_chr6_-_144157971_144158077	0.757442	HOX{A6,A7,B6,B7}.p2	BC110478|Sox5|20678|SRY-box containing gene 5	AK132307|Sox5|20678|SRY-box containing gene 5	AB006330|Sox5|20678|SRY-box containing gene 5	AJ010604|Sox5|20678|SRY-box containing gene 5	NM_001113559|Sox5|20678|SRY-box containing gene 5	NM_011444|Sox5|20678|SRY-box containing gene 5
mm9_v1_chr2_-_129525512_129525673	0.75744	HOX{A6,A7,B6,B7}.p2	BC137571|Pdyn|18610|prodynorphin	BC137572|Pdyn|18610|prodynorphin	AF026537|Pdyn|18610|prodynorphin	AK133597|Pdyn|18610|prodynorphin
mm9_v1_chr6_+_73221007_73221091	0.754756	HOX{A6,A7,B6,B7}.p2	AK204482|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr6_+_87378995_87379026	0.754173	HOX{A6,A7,B6,B7}.p2	BC145044|Bmp10|12154|bone morphogenetic protein 10	BC145983|Bmp10|12154|bone morphogenetic protein 10	NM_009756|Bmp10|12154|bone morphogenetic protein 10	AF101033|Bmp10|12154|bone morphogenetic protein 10
mm9_v1_chr7_+_31350445_31350445	0.752022	HOX{A6,A7,B6,B7}.p2	AK154129|Tmem149|101883|transmembrane protein 149	NM_145580|Tmem149|101883|transmembrane protein 149
mm9_v1_chrX_+_160811458_160811498	0.750049	HOX{A6,A7,B6,B7}.p2	NM_010216|Figf|14205|c-fos induced growth factor	X99572|Figf|14205|c-fos induced growth factor	BC080770|Figf|14205|c-fos induced growth factor
mm9_v1_chr11_-_97521633_97521716	0.749052	HOX{A6,A7,B6,B7}.p2	AK052674|LOC432596|432596|similar to Als2 protein
mm9_v1_chr6_-_128531620_128531628	0.74774	HOX{A6,A7,B6,B7}.p2	AK138836|BC048546|232400|cDNA sequence BC048546	NM_001001179|BC048546|232400|cDNA sequence BC048546	AK161184|BC048546|232400|cDNA sequence BC048546
mm9_v1_chr18_+_50115628_50115725	0.747457	HOX{A6,A7,B6,B7}.p2	AK046910|Dmxl1|240283|Dmx-like 1
mm9_v1_chr2_-_26923387_26923387	0.746083	HOX{A6,A7,B6,B7}.p2	NM_001159602|Tmem8c|66139|transmembrane protein 8C
mm9_v1_chr1_-_37776633_37776680	0.744927	HOX{A6,A7,B6,B7}.p2	AK039052|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene	BC072639|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene	NM_028096|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene
mm9_v1_chr11_-_53520771_53520798	0.743791	HOX{A6,A7,B6,B7}.p2	BC058180|Rad50|19360|RAD50 homolog (S. cerevisiae)	U66887|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr11_-_104411728_104411933	0.742966	HOX{A6,A7,B6,B7}.p2	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr15_-_101648565_101648599	0.742943	HOX{A6,A7,B6,B7}.p2	BC120485|Krt2|16681|keratin 2	BC139485|Krt2|16681|keratin 2	X74784|Krt2|16681|keratin 2	AK161078|Krt2|16681|keratin 2	AK132476|Krt2|16681|keratin 2	AK161098|Krt2|16681|keratin 2	NM_010668|Krt2|16681|keratin 2
mm9_v1_chr15_+_100766701_100766755	0.742323	HOX{A6,A7,B6,B7}.p2	NM_011323|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	U26707|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AF049617|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr8_+_68141935_68142010	0.742155	HOX{A6,A7,B6,B7}.p2	AK013582|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166372|March1|72925|membrane-associated ring finger (C3HC4) 1	AK086052|March1|72925|membrane-associated ring finger (C3HC4) 1	AK137337|March1|72925|membrane-associated ring finger (C3HC4) 1	AK160684|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr1_-_173957407_173957430	0.742101	HOX{A6,A7,B6,B7}.p2	AK049613|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	AK046036|Vangl2|93840|vang-like 2 (van gogh, Drosophila)
mm9_v1_chr9_+_54711492_54711604	0.741174	HOX{A6,A7,B6,B7}.p2	NM_022655|Ireb2|64602|iron responsive element binding protein 2	BC044665|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr13_-_24083033_24083082	0.740615	HOX{A6,A7,B6,B7}.p2	AK148468|Scgn|214189|secretagogin, EF-hand calcium binding protein	BC016093|Scgn|214189|secretagogin, EF-hand calcium binding protein	NM_145399|Scgn|214189|secretagogin, EF-hand calcium binding protein
mm9_v1_chr1_-_45559866_45559893	0.73946	HOX{A6,A7,B6,B7}.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr15_+_59205752_59205871	0.738677	HOX{A6,A7,B6,B7}.p2	NM_001164604|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	NM_026746|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK003685|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK051277|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	BC009125|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK188685|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK211545|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK212165|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)
mm9_v1_chr11_+_96055650_96055659	0.736875	HOX{A6,A7,B6,B7}.p2	AK077273|Hoxb13|15408|homeobox B13
mm9_v1_chr17_+_24625530_24625580	0.735544	HOX{A6,A7,B6,B7}.p2	AK014376|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr10_+_127795461_127795537	0.734065	HOX{A6,A7,B6,B7}.p2	DQ403125|Cs|12974|citrate synthase	AK012104|Cs|12974|citrate synthase
mm9_v1_chr19_-_7557553_7557640	0.733447	HOX{A6,A7,B6,B7}.p2	AY507126|Rtn3|20168|reticulon 3	AK146505|Rtn3|20168|reticulon 3
mm9_v1_chr7_+_53172414_53172566	0.730896	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_31329530_31329530	0.730327	HOX{A6,A7,B6,B7}.p2	NM_001146349|Rnf217|268291|ring finger protein 217
mm9_v1_chr3_-_129458190_129458239	0.729604	HOX{A6,A7,B6,B7}.p2	V00741|Egf|13645|epidermal growth factor	BC060741|Egf|13645|epidermal growth factor	BC092277|Egf|13645|epidermal growth factor	BC017681|Egf|13645|epidermal growth factor	AK084927|Egf|13645|epidermal growth factor	J00380|Egf|13645|epidermal growth factor	NM_010113|Egf|13645|epidermal growth factor
mm9_v1_chr11_-_95171479_95171519	0.727234	HOX{A6,A7,B6,B7}.p2	AK169458|Myst2|217127|MYST histone acetyltransferase 2	BC057102|Myst2|217127|MYST histone acetyltransferase 2	DQ076247|Myst2|217127|MYST histone acetyltransferase 2	AK160750|Myst2|217127|MYST histone acetyltransferase 2	AK170389|Myst2|217127|MYST histone acetyltransferase 2	BC048904|Myst2|217127|MYST histone acetyltransferase 2	AK164336|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr14_+_118559355_118559360	0.727091	HOX{A6,A7,B6,B7}.p2	AK040165|Gpr180|58245|G protein-coupled receptor 180
mm9_v1_chr10_+_127525538_127525558	0.726677	HOX{A6,A7,B6,B7}.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr11_-_102152310_102152512	0.725074	HOX{A6,A7,B6,B7}.p2	AK218190|Atxn7l3|217218|ataxin 7-like 3	AK053165|Atxn7l3|217218|ataxin 7-like 3
mm9_v1_chr8_-_59029362_59029362	0.725046	HOX{A6,A7,B6,B7}.p2	BC088983|BC088983|382010|cDNA sequence BC088983	NM_001009951|BC088983|382010|cDNA sequence BC088983
mm9_v1_chr3_-_146184337_146184397	0.72246	HOX{A6,A7,B6,B7}.p2	BC056165|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171035|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	BC089369|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK008988|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK010079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027332|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027371|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK162073|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)
mm9_v1_chr7_+_29573191_29573292	0.719923	HOX{A6,A7,B6,B7}.p2	AK200274|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)
mm9_v1_chr19_+_59533179_59533179	0.719447	HOX{A6,A7,B6,B7}.p2	NM_010132|Emx2|13797|empty spiracles homolog 2 (Drosophila)
mm9_v1_chr18_+_34784589_34784686	0.717277	HOX{A6,A7,B6,B7}.p2	NM_009004|Kif20a|19348|kinesin family member 20A	AK083412|Kif20a|19348|kinesin family member 20A	AK051995|Kif20a|19348|kinesin family member 20A	AK084732|Kif20a|19348|kinesin family member 20A	AK142764|Kif20a|19348|kinesin family member 20A	AK083697|Kif20a|19348|kinesin family member 20A	AK051201|Kif20a|19348|kinesin family member 20A	AK053280|Kif20a|19348|kinesin family member 20A	AK144844|Kif20a|19348|kinesin family member 20A	BC060608|Kif20a|19348|kinesin family member 20A	NM_001166406|Kif20a|19348|kinesin family member 20A
mm9_v1_chr19_+_44277761_44277879	0.716844	HOX{A6,A7,B6,B7}.p2	AK078675|Scd3|30049|stearoyl-coenzyme A desaturase 3	AK078713|Scd3|30049|stearoyl-coenzyme A desaturase 3	AK136277|Scd3|30049|stearoyl-coenzyme A desaturase 3	NM_024450|Scd3|30049|stearoyl-coenzyme A desaturase 3	AF272037|Scd3|30049|stearoyl-coenzyme A desaturase 3	BC118033|Scd3|30049|stearoyl-coenzyme A desaturase 3	BC118045|Scd3|30049|stearoyl-coenzyme A desaturase 3
mm9_v1_chr18_-_24762299_24762341	0.715223	HOX{A6,A7,B6,B7}.p2	NM_139143|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr3_-_127111869_127111953	0.714864	HOX{A6,A7,B6,B7}.p2	AK047866|Ank2|109676|ankyrin 2, brain	AK084070|Ank2|109676|ankyrin 2, brain	AK036179|Ank2|109676|ankyrin 2, brain	AK166115|Ank2|109676|ankyrin 2, brain	AK046947|Ank2|109676|ankyrin 2, brain
mm9_v1_chr9_+_65974417_65974646	0.713258	HOX{A6,A7,B6,B7}.p2	AK077700|Fam96a|68250|family with sequence similarity 96, member A	NM_026635|Fam96a|68250|family with sequence similarity 96, member A	AK002690|Fam96a|68250|family with sequence similarity 96, member A	BC005745|Fam96a|68250|family with sequence similarity 96, member A	AK003870|Fam96a|68250|family with sequence similarity 96, member A	AK170445|Fam96a|68250|family with sequence similarity 96, member A	AK197739|Fam96a|68250|family with sequence similarity 96, member A
mm9_v1_chr19_+_53218486_53218486	0.712466	HOX{A6,A7,B6,B7}.p2	BC037116|Add3|27360|adducin 3 (gamma)	NM_013758|Add3|27360|adducin 3 (gamma)
mm9_v1_chr18_+_78012506_78012506	0.71205	HOX{A6,A7,B6,B7}.p2	NM_007505|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr14_-_70607443_70607553	0.711596	HOX{A6,A7,B6,B7}.p2	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr7_+_117161821_117161836	0.710758	HOX{A6,A7,B6,B7}.p2	AK079903|Ipo7|233726|importin 7	AK148820|Ipo7|233726|importin 7	AK169981|Ipo7|233726|importin 7
mm9_v1_chr4_-_19636000_19636212	0.710438	HOX{A6,A7,B6,B7}.p2	AK137588|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	BC026829|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK168567|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK032232|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK042432|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	NM_177327|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chrX_+_10294707_10294726	0.710404	HOX{A6,A7,B6,B7}.p2	AK131619|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK014143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr4_+_106260649_106260683	0.709949	HOX{A6,A7,B6,B7}.p2	AK010192|Dhcr24|74754|24-dehydrocholesterol reductase
mm9_v1_chr4_+_101390232_101390324	0.709849	HOX{A6,A7,B6,B7}.p2	AK143989|Lepr|16847|leptin receptor
mm9_v1_chr2_-_32137306_32137330	0.70939	HOX{A6,A7,B6,B7}.p2	AB597965|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK216650|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene
mm9_v1_chr6_+_139535757_139535771	0.707578	HOX{A6,A7,B6,B7}.p2	BC099684|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AB008791|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC150813|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_207683|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr11_+_3584631_3584687	0.706801	HOX{A6,A7,B6,B7}.p2	AK018377|Morc2a|74522|microrchidia 2A
mm9_v1_chr7_+_20094042_20094114	0.706387	HOX{A6,A7,B6,B7}.p2	BC106114|Trappc6a|67091|trafficking protein particle complex 6A	NM_025960|Trappc6a|67091|trafficking protein particle complex 6A	AK007965|Trappc6a|67091|trafficking protein particle complex 6A	AK008022|Trappc6a|67091|trafficking protein particle complex 6A	AK008462|Trappc6a|67091|trafficking protein particle complex 6A	AK088832|Trappc6a|67091|trafficking protein particle complex 6A	BC020128|Trappc6a|67091|trafficking protein particle complex 6A	AK015839|Trappc6a|67091|trafficking protein particle complex 6A
mm9_v1_chr9_-_63450254_63450297	0.705974	HOX{A6,A7,B6,B7}.p2	BC141047|Iqch|78250|IQ motif containing H	BC145231|Iqch|78250|IQ motif containing H	NM_030068|Iqch|78250|IQ motif containing H	AK019535|Iqch|78250|IQ motif containing H	AK029502|Iqch|78250|IQ motif containing H	AK029560|Iqch|78250|IQ motif containing H
mm9_v1_chr7_+_82600419_82600490	0.703716	HOX{A6,A7,B6,B7}.p2	NM_029332|Akap13|75547|A kinase (PRKA) anchor protein 13	AK157986|Akap13|75547|A kinase (PRKA) anchor protein 13	AK172125|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chr15_+_91503654_91503682	0.70364	HOX{A6,A7,B6,B7}.p2	AK052591|Lrrk2|66725|leucine-rich repeat kinase 2	NM_025730|Lrrk2|66725|leucine-rich repeat kinase 2
mm9_v1_chr17_+_34176381_34176393	0.699148	HOX{A6,A7,B6,B7}.p2	NM_009926|Col11a2|12815|collagen, type XI, alpha 2	U16789|Col11a2|12815|collagen, type XI, alpha 2
mm9_v1_chr2_+_5766079_5766079	0.698891	HOX{A6,A7,B6,B7}.p2	AK088222|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5	NM_016918|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm9_v1_chr5_+_17080553_17080681	0.698504	HOX{A6,A7,B6,B7}.p2	AK034239|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK078589|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC066852|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	NM_013657|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	X85994|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm9_v1_chr9_-_56008828_56008912	0.697184	HOX{A6,A7,B6,B7}.p2	AK159621|Tspan3|56434|tetraspanin 3	AK159324|Tspan3|56434|tetraspanin 3	AK169068|Tspan3|56434|tetraspanin 3	BC043072|Tspan3|56434|tetraspanin 3	AK146130|Tspan3|56434|tetraspanin 3	AK168231|Tspan3|56434|tetraspanin 3	NM_019793|Tspan3|56434|tetraspanin 3
mm9_v1_chr12_+_59312790_59312790	0.697103	HOX{A6,A7,B6,B7}.p2	AK046464|Sstr1|20605|somatostatin receptor 1	NM_009216|Sstr1|20605|somatostatin receptor 1
mm9_v1_chr11_-_105318037_105318048	0.69595	HOX{A6,A7,B6,B7}.p2	AK132734|March10|632687|membrane-associated ring finger (C3HC4) 10	BC100474|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_001039242|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_172568|March10|632687|membrane-associated ring finger (C3HC4) 10
mm9_v1_chr11_+_77851417_77851587	0.695121	HOX{A6,A7,B6,B7}.p2	AK170557|Flot2|14252|flotillin 2	NM_001040403|Flot2|14252|flotillin 2	NM_008028|Flot2|14252|flotillin 2	AK030199|Flot2|14252|flotillin 2	BC070423|Flot2|14252|flotillin 2	AK004589|Flot2|14252|flotillin 2	AK149530|Flot2|14252|flotillin 2	AK187814|Flot2|14252|flotillin 2	AK213895|Flot2|14252|flotillin 2
mm9_v1_chr5_-_87683812_87683841	0.695068	HOX{A6,A7,B6,B7}.p2	BC019487|Ugt2b37|112417|UDP glucuronosyltransferase 2 family, polypeptide B37	NM_053215|Ugt2b37|112417|UDP glucuronosyltransferase 2 family, polypeptide B37	AK002736|Ugt2b37|112417|UDP glucuronosyltransferase 2 family, polypeptide B37
mm9_v1_chr11_+_22913386_22913386	0.694648	HOX{A6,A7,B6,B7}.p2	BC026495|Fam161a|73873|family with sequence similarity 161, member A	NM_028672|Fam161a|73873|family with sequence similarity 161, member A
mm9_v1_chr1_+_10028298_10028342	0.693169	HOX{A6,A7,B6,B7}.p2	NM_026493|Cspp1|211660|centrosome and spindle pole associated protein 1	BC151042|Cspp1|211660|centrosome and spindle pole associated protein 1	BC019581|Cspp1|211660|centrosome and spindle pole associated protein 1
mm9_v1_chr17_+_75835208_75835359	0.689888	HOX{A6,A7,B6,B7}.p2	NM_001166493|Rasgrp3|240168|RAS, guanyl releasing protein 3	AK173041|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr6_-_6167034_6167063	0.687916	HOX{A6,A7,B6,B7}.p2	AK002829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK012670|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr5_-_37087142_37087184	0.685207	HOX{A6,A7,B6,B7}.p2	AK152987|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	AK032804|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	AK139370|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed
mm9_v1_chr9_-_103129187_103129277	0.684184	HOX{A6,A7,B6,B7}.p2	BC008559|Trf|22041|transferrin	M23013|Trf|22041|transferrin
mm9_v1_chr2_-_25947915_25947915	0.683817	HOX{A6,A7,B6,B7}.p2	NM_001037098|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm9_v1_chr11_+_92959670_92959804	0.682985	HOX{A6,A7,B6,B7}.p2	AK012302|Car10|72605|carbonic anhydrase 10	AB080741|Car10|72605|carbonic anhydrase 10	BC066111|Car10|72605|carbonic anhydrase 10	AK038695|Car10|72605|carbonic anhydrase 10
mm9_v1_chr16_-_36131169_36131274	0.682239	HOX{A6,A7,B6,B7}.p2	BC139156|Csta|209294|cystatin A	BC139157|Csta|209294|cystatin A	AK137702|Csta|209294|cystatin A	NM_001033239|Csta|209294|cystatin A
mm9_v1_chr6_+_42214999_42215177	0.680369	HOX{A6,A7,B6,B7}.p2	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chrX_-_101176574_101176590	0.67962	HOX{A6,A7,B6,B7}.p2	AF069992|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr17_+_29628249_29628310	0.678316	HOX{A6,A7,B6,B7}.p2	AK154669|Pim1|18712|proviral integration site 1
mm9_v1_chr5_-_24606422_24606505	0.678198	HOX{A6,A7,B6,B7}.p2	AK154296|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_145401|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr7_-_134563059_134563065	0.675715	HOX{A6,A7,B6,B7}.p2	BC038680|Zfp688|69234|zinc finger protein 688
mm9_v1_chr15_+_91503687_91503711	0.673408	HOX{A6,A7,B6,B7}.p2	AY792512|Lrrk2|66725|leucine-rich repeat kinase 2
mm9_v1_chr5_-_123979739_123979846	0.672837	HOX{A6,A7,B6,B7}.p2	AK080345|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr1_+_82583495_82583550	0.671172	HOX{A6,A7,B6,B7}.p2	AK086939|Col4a3|12828|collagen, type IV, alpha 3	NM_007734|Col4a3|12828|collagen, type IV, alpha 3	AF169387|Col4a3|12828|collagen, type IV, alpha 3
mm9_v1_chr2_+_156588506_156588592	0.670708	HOX{A6,A7,B6,B7}.p2	AK179758|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK186004|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr11_+_68939734_68939879	0.667703	HOX{A6,A7,B6,B7}.p2	NM_011786|Aloxe3|23801|arachidonate lipoxygenase 3	Y14695|Aloxe3|23801|arachidonate lipoxygenase 3	BC116258|Aloxe3|23801|arachidonate lipoxygenase 3	BC116259|Aloxe3|23801|arachidonate lipoxygenase 3
mm9_v1_chr10_+_98725871_98725972	0.666776	HOX{A6,A7,B6,B7}.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr11_+_19824374_19824394	0.66674	HOX{A6,A7,B6,B7}.p2	BC066013|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr8_-_74061134_74061382	0.665344	HOX{A6,A7,B6,B7}.p2	AK009361|Bst2|69550|bone marrow stromal cell antigen 2	AK154399|Bst2|69550|bone marrow stromal cell antigen 2	BC087949|Bst2|69550|bone marrow stromal cell antigen 2	BC056638|Bst2|69550|bone marrow stromal cell antigen 2	NM_198095|Bst2|69550|bone marrow stromal cell antigen 2
mm9_v1_chr6_-_101327849_101327941	0.665039	HOX{A6,A7,B6,B7}.p2	AK173098|Pdzrn3|55983|PDZ domain containing RING finger 3	HM560981|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127084|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127085|Pdzrn3|55983|PDZ domain containing RING finger 3	NM_018884|Pdzrn3|55983|PDZ domain containing RING finger 3
mm9_v1_chr19_-_55315725_55315725	0.662659	HOX{A6,A7,B6,B7}.p2	AY395631|Gucy2g|73707|guanylate cyclase 2g	NM_001081076|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr5_-_93612121_93612133	0.661921	HOX{A6,A7,B6,B7}.p2	AK177612|Ccni|12453|cyclin I	AK198604|Ccni|12453|cyclin I
mm9_v1_chr18_+_43923976_43923988	0.661913	HOX{A6,A7,B6,B7}.p2	AK136373|Scgb3a2|117158|secretoglobin, family 3A, member 2	AK136396|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274959|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274960|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274961|Scgb3a2|117158|secretoglobin, family 3A, member 2	BC061046|Scgb3a2|117158|secretoglobin, family 3A, member 2	NM_054038|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF439546|Scgb3a2|117158|secretoglobin, family 3A, member 2
mm9_v1_chr2_+_35992148_35992200	0.661408	HOX{A6,A7,B6,B7}.p2	BC019787|Mrrf|67871|mitochondrial ribosome recycling factor	AK010018|Mrrf|67871|mitochondrial ribosome recycling factor
mm9_v1_chr12_+_31950097_31950203	0.660607	HOX{A6,A7,B6,B7}.p2	AK143079|Lamb1|16777|laminin B1	AK051131|Lamb1|16777|laminin B1	NM_008482|Lamb1|16777|laminin B1	AK147313|Lamb1|16777|laminin B1	AK164842|Lamb1|16777|laminin B1	BC150809|Lamb1|16777|laminin B1
mm9_v1_chrX_-_71674201_71674273	0.659575	HOX{A6,A7,B6,B7}.p2	Z11911|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK088135|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK148031|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK165207|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked
mm9_v1_chr7_-_135039020_135039157	0.657904	HOX{A6,A7,B6,B7}.p2	AK008509|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK008578|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK002742|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	BC031732|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK013996|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK003237|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	NM_178600|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1
mm9_v1_chr3_+_115591053_115591114	0.6575	HOX{A6,A7,B6,B7}.p2	AK045127|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK046753|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK034652|Dph5|69740|DPH5 homolog (S. cerevisiae)	BC060372|Dph5|69740|DPH5 homolog (S. cerevisiae)	NM_027193|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK010475|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK045548|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK046024|Dph5|69740|DPH5 homolog (S. cerevisiae)
mm9_v1_chr12_+_82732188_82732357	0.657315	HOX{A6,A7,B6,B7}.p2	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr17_+_24665193_24665201	0.655431	HOX{A6,A7,B6,B7}.p2	AK011460|2610019E17Rik|75614|RIKEN cDNA 2610019E17 gene
mm9_v1_chr2_-_34655238_34655332	0.654568	HOX{A6,A7,B6,B7}.p2	BC019800|Rabepk|227746|Rab9 effector protein with kelch motifs	AK035343|Rabepk|227746|Rab9 effector protein with kelch motifs	NM_145522|Rabepk|227746|Rab9 effector protein with kelch motifs	AK153022|Rabepk|227746|Rab9 effector protein with kelch motifs
mm9_v1_chr11_-_69609381_69609404	0.652098	HOX{A6,A7,B6,B7}.p2	M14537|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr10_+_80599284_80599377	0.651198	HOX{A6,A7,B6,B7}.p2	AK149961|Zbtb7a|16969|zinc finger and BTB domain containing 7a	AK154907|Zbtb7a|16969|zinc finger and BTB domain containing 7a	AK157664|Zbtb7a|16969|zinc finger and BTB domain containing 7a	BC057204|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr10_-_79371636_79371695	0.650735	HOX{A6,A7,B6,B7}.p2	BC057056|Med16|216154|mediator complex subunit 16	AK042340|Med16|216154|mediator complex subunit 16	AK149345|Med16|216154|mediator complex subunit 16	NM_001163276|Med16|216154|mediator complex subunit 16	NM_198107|Med16|216154|mediator complex subunit 16
mm9_v1_chr9_-_66880619_66880631	0.650059	HOX{A6,A7,B6,B7}.p2	AK190148|Tpm1|22003|tropomyosin 1, alpha	AK083087|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr8_+_87213179_87213195	0.64972	HOX{A6,A7,B6,B7}.p2	AK040715|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK078395|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK084775|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK159467|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK170412|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK155251|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK171002|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK139463|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr11_-_70051081_70051130	0.649361	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_37486981_37487095	0.648921	HOX{A6,A7,B6,B7}.p2	AK132757|Unc50|67387|unc-50 homolog (C. elegans)	NM_026123|Unc50|67387|unc-50 homolog (C. elegans)	AK135885|Unc50|67387|unc-50 homolog (C. elegans)	AK003273|Unc50|67387|unc-50 homolog (C. elegans)	AY017214|Unc50|67387|unc-50 homolog (C. elegans)	AK004433|Unc50|67387|unc-50 homolog (C. elegans)	BC019484|Unc50|67387|unc-50 homolog (C. elegans)
mm9_v1_chr19_-_5609896_5610062	0.646565	HOX{A6,A7,B6,B7}.p2	AK195015|Kat5|81601|K(lysine) acetyltransferase 5	AK159568|Kat5|81601|K(lysine) acetyltransferase 5	AK160077|Kat5|81601|K(lysine) acetyltransferase 5	BC129967|Kat5|81601|K(lysine) acetyltransferase 5	AF528195|Kat5|81601|K(lysine) acetyltransferase 5	AF528196|Kat5|81601|K(lysine) acetyltransferase 5	BC129968|Kat5|81601|K(lysine) acetyltransferase 5	DQ139980|Kat5|81601|K(lysine) acetyltransferase 5	NM_178637|Kat5|81601|K(lysine) acetyltransferase 5	BC110675|Kat5|81601|K(lysine) acetyltransferase 5	AK143674|Kat5|81601|K(lysine) acetyltransferase 5	AK146352|Kat5|81601|K(lysine) acetyltransferase 5
mm9_v1_chr8_-_127275549_127275749	0.645612	HOX{A6,A7,B6,B7}.p2	BC023460|Fam89a|69627|family with sequence similarity 89, member A	BC115734|Fam89a|69627|family with sequence similarity 89, member A	BC115819|Fam89a|69627|family with sequence similarity 89, member A	NM_001081120|Fam89a|69627|family with sequence similarity 89, member A
mm9_v1_chr9_+_121643763_121643808	0.644782	HOX{A6,A7,B6,B7}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr8_+_97605137_97605189	0.642943	HOX{A6,A7,B6,B7}.p2	AK010364|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK037858|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK034103|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK136322|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK031630|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK049345|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK087973|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	BC045200|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1
mm9_v1_chr17_+_43526389_43526484	0.64186	HOX{A6,A7,B6,B7}.p2	NM_001081178|Gpr116|224792|G protein-coupled receptor 116
mm9_v1_chr16_+_22951144_22951164	0.641638	HOX{A6,A7,B6,B7}.p2	NM_053176|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr4_+_155243643_155243753	0.641111	HOX{A6,A7,B6,B7}.p2	AK167607|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK090206|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	NM_028020|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK150436|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK152740|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	BC011155|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK172533|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK010425|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like	AK185355|Cpsf3l|71957|cleavage and polyadenylation specific factor 3-like
mm9_v1_chr7_+_148592433_148592442	0.64078	HOX{A6,A7,B6,B7}.p2	NM_001101644|Gm4535|100043585|predicted gene 4535
mm9_v1_chr19_-_5801011_5801112	0.640077	HOX{A6,A7,B6,B7}.p2	AK008790|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr11_-_70273190_70273200	0.639862	HOX{A6,A7,B6,B7}.p2	AK153192|Cxcl16|66102|chemokine (C-X-C motif) ligand 16
mm9_v1_chr5_-_134932078_134932131	0.638172	HOX{A6,A7,B6,B7}.p2	BC083150|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK079487|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081465|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1
mm9_v1_chr6_+_38059352_38059360	0.63302	HOX{A6,A7,B6,B7}.p2	AK021320|Tmem213|77522|transmembrane protein 213	NM_029921|Tmem213|77522|transmembrane protein 213	BC104374|Tmem213|77522|transmembrane protein 213	BC104375|Tmem213|77522|transmembrane protein 213	BC119477|Tmem213|77522|transmembrane protein 213
mm9_v1_chr14_+_29318658_29318741	0.632623	HOX{A6,A7,B6,B7}.p2	NM_009524|Wnt5a|22418|wingless-related MMTV integration site 5A	AK031597|Wnt5a|22418|wingless-related MMTV integration site 5A	M89798|Wnt5a|22418|wingless-related MMTV integration site 5A
mm9_v1_chr12_-_21423296_21423379	0.632252	HOX{A6,A7,B6,B7}.p2	BC090838|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	NM_011739|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC110680|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm9_v1_chr3_-_153574996_153575274	0.631343	HOX{A6,A7,B6,B7}.p2	AK160162|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC003948|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC021335|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	AF231926|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	U12922|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC132473|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC138547|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145323|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145324|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145325|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145326|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	NM_011231|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC057661|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit
mm9_v1_chr9_+_44048756_44048763	0.630259	HOX{A6,A7,B6,B7}.p2	NM_001081369|Ccdc153|270150|coiled-coil domain containing 153
mm9_v1_chr4_+_101320298_101320414	0.630204	HOX{A6,A7,B6,B7}.p2	AK152008|Leprot|230514|leptin receptor overlapping transcript	AK159489|Leprot|230514|leptin receptor overlapping transcript	AK165821|Leprot|230514|leptin receptor overlapping transcript	AK168597|Leprot|230514|leptin receptor overlapping transcript	AK160453|Leprot|230514|leptin receptor overlapping transcript	AK009569|Leprot|230514|leptin receptor overlapping transcript	NM_175036|Leprot|230514|leptin receptor overlapping transcript	BC004744|Leprot|230514|leptin receptor overlapping transcript	BC010289|Leprot|230514|leptin receptor overlapping transcript	AJ011565|Leprot|230514|leptin receptor overlapping transcript
mm9_v1_chr15_-_103196944_103197034	0.627906	HOX{A6,A7,B6,B7}.p2	AK144921|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	AK152594|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	AK148138|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	AK142241|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)
mm9_v1_chrX_-_98417753_98417901	0.627017	HOX{A6,A7,B6,B7}.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr9_+_106724228_106724306	0.626707	HOX{A6,A7,B6,B7}.p2	BC065119|Vprbp|321006|Vpr (HIV-1) binding protein	NM_001015507|Vprbp|321006|Vpr (HIV-1) binding protein
mm9_v1_chr4_+_46000333_46000333	0.62544	HOX{A6,A7,B6,B7}.p2	BC029689|Tdrd7|100121|tudor domain containing 7	NM_146142|Tdrd7|100121|tudor domain containing 7
mm9_v1_chrX_-_131285919_131285957	0.623322	HOX{A6,A7,B6,B7}.p2	BC027264|Armcx6|278097|armadillo repeat containing, X-linked 6	AK148507|Armcx6|278097|armadillo repeat containing, X-linked 6	AK160766|Armcx6|278097|armadillo repeat containing, X-linked 6	NM_001007578|Armcx6|278097|armadillo repeat containing, X-linked 6
mm9_v1_chr12_-_70683972_70684096	0.621047	HOX{A6,A7,B6,B7}.p2	AK144832|Gm71|207965|predicted gene 71	AK083148|Gm71|207965|predicted gene 71	NM_001033236|Gm71|207965|predicted gene 71	BC138942|Gm71|207965|predicted gene 71	BC138943|Gm71|207965|predicted gene 71	BC145471|Gm71|207965|predicted gene 71
mm9_v1_chr17_+_34491766_34491876	0.620698	HOX{A6,A7,B6,B7}.p2	AK136521|Btnl2|547431|butyrophilin-like 2	NM_079835|Btnl2|547431|butyrophilin-like 2	BC141103|Btnl2|547431|butyrophilin-like 2
mm9_v1_chr12_-_72237590_72237690	0.619679	HOX{A6,A7,B6,B7}.p2	AK012712|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK171071|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AF150101|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC028435|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC024370|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK018764|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK165848|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024853|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024854|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_013896|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK172179|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)
mm9_v1_chr14_-_32137076_32137081	0.618613	HOX{A6,A7,B6,B7}.p2	AK053204|Dnahc1|110084|dynein, axonemal, heavy chain 1	NM_001033668|Dnahc1|110084|dynein, axonemal, heavy chain 1
mm9_v1_chr13_-_41454331_41454333	0.617869	HOX{A6,A7,B6,B7}.p2	AK046357|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr14_+_51627425_51627425	0.61517	HOX{A6,A7,B6,B7}.p2	AK015573|Rnase10|75019|ribonuclease, RNase A family, 10 (non-active)	NM_001162863|Rnase10|75019|ribonuclease, RNase A family, 10 (non-active)
mm9_v1_chr16_-_95218980_95219037	0.614974	HOX{A6,A7,B6,B7}.p2	D86040|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	AK081109|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6
mm9_v1_chr11_+_76780273_76780290	0.614716	HOX{A6,A7,B6,B7}.p2	AK219647|Blmh|104184|bleomycin hydrolase
mm9_v1_chr10_-_61802889_61803289	0.614363	HOX{A6,A7,B6,B7}.p2	AK167468|Hk1|15275|hexokinase 1	AK143630|Hk1|15275|hexokinase 1	NM_001146100|Hk1|15275|hexokinase 1	BC072628|Hk1|15275|hexokinase 1
mm9_v1_chr10_-_61802814_61802882	0.613125	HOX{A6,A7,B6,B7}.p2	AK214520|Hk1|15275|hexokinase 1	J05277|Hk1|15275|hexokinase 1	BC027316|Hk1|15275|hexokinase 1	AK149749|Hk1|15275|hexokinase 1
mm9_v1_chr10_+_85061155_85061265	0.612834	HOX{A6,A7,B6,B7}.p2	NM_001017525|Btbd11|74007|BTB (POZ) domain containing 11	AK044022|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr17_-_32421603_32421681	0.611645	HOX{A6,A7,B6,B7}.p2	BC103773|Brd4|57261|bromodomain containing 4	AK042431|Brd4|57261|bromodomain containing 4	BC013666|Brd4|57261|bromodomain containing 4	AK154514|Brd4|57261|bromodomain containing 4
mm9_v1_chr17_+_72119030_72119041	0.608765	HOX{A6,A7,B6,B7}.p2	AK029962|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	NM_175378|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK018895|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK075758|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK161301|Clip4|78785|CAP-GLY domain containing linker protein family, member 4
mm9_v1_chr9_-_103118228_103118262	0.60743	HOX{A6,A7,B6,B7}.p2	AK203903|Trf|22041|transferrin
mm9_v1_chr1_-_45559904_45559916	0.606175	HOX{A6,A7,B6,B7}.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr9_-_45636638_45636736	0.606096	HOX{A6,A7,B6,B7}.p2	AK158671|Cep164|214552|centrosomal protein 164	NM_001081373|Cep164|214552|centrosomal protein 164
mm9_v1_chr2_+_30302648_30302832	0.604891	HOX{A6,A7,B6,B7}.p2	AK011735|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK208338|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK217782|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr11_+_120466872_120466883	0.604697	HOX{A6,A7,B6,B7}.p2	AK205961|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr9_-_119835967_119836242	0.602881	HOX{A6,A7,B6,B7}.p2	AK198424|Gorasp1|74498|golgi reassembly stacking protein 1	AK209806|Gorasp1|74498|golgi reassembly stacking protein 1	AK213744|Gorasp1|74498|golgi reassembly stacking protein 1	AK204247|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr8_-_24301206_24301672	0.599322	HOX{A6,A7,B6,B7}.p2	AK178773|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AK182757|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AK204634|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AY489184|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	AK188390|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	BC031767|Agpat6|102247|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)
mm9_v1_chr17_+_64245366_64245425	0.598852	HOX{A6,A7,B6,B7}.p2	NM_001037997|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2	U76762|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2	AF286537|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2
mm9_v1_chr2_-_160738055_160738063	0.5984	HOX{A6,A7,B6,B7}.p2	BC054738|Emilin3|280635|elastin microfibril interfacer 3	BC057619|Emilin3|280635|elastin microfibril interfacer 3	NM_182840|Emilin3|280635|elastin microfibril interfacer 3
mm9_v1_chr7_-_149843316_149843387	0.597223	HOX{A6,A7,B6,B7}.p2	M14951|Igf2|16002|insulin-like growth factor 2	BC058615|Igf2|16002|insulin-like growth factor 2	BC053489|Igf2|16002|insulin-like growth factor 2	NM_001122737|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr3_-_63941401_63941401	0.596953	HOX{A6,A7,B6,B7}.p2	NM_001104592|Vmn2r2|100125586|vomeronasal 2, receptor 2
mm9_v1_chr11_-_100259061_100259098	0.59477	HOX{A6,A7,B6,B7}.p2	AK170934|Jup|16480|junction plakoglobin	AK171501|Jup|16480|junction plakoglobin	AK145895|Jup|16480|junction plakoglobin
mm9_v1_chr5_-_52957518_52957569	0.591584	HOX{A6,A7,B6,B7}.p2	NM_144945|Lgi2|246316|leucine-rich repeat LGI family, member 2	AJ487515|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr4_+_62021760_62021858	0.59157	HOX{A6,A7,B6,B7}.p2	AK046835|Slc31a1|20529|solute carrier family 31, member 1	AK170285|Slc31a1|20529|solute carrier family 31, member 1	BC058227|Slc31a1|20529|solute carrier family 31, member 1	BC034674|Slc31a1|20529|solute carrier family 31, member 1	AK203972|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr4_-_117852224_117852281	0.59136	HOX{A6,A7,B6,B7}.p2	AK129187|Kdm4a|230674|lysine (K)-specific demethylase 4A
mm9_v1_chr15_-_102008126_102008145	0.591339	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr6_+_4465627_4465644	0.587222	HOX{A6,A7,B6,B7}.p2	AK160814|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chrX_+_68809103_68809115	0.585856	HOX{A6,A7,B6,B7}.p2	AK159119|Hmgb3|15354|high mobility group box 3	AK159322|Hmgb3|15354|high mobility group box 3
mm9_v1_chr3_+_114606995_114607339	0.585681	HOX{A6,A7,B6,B7}.p2	AK049612|Olfm3|229759|olfactomedin 3	AK044605|Olfm3|229759|olfactomedin 3	AK045482|Olfm3|229759|olfactomedin 3	AK038569|Olfm3|229759|olfactomedin 3	AK079315|Olfm3|229759|olfactomedin 3	AK044325|Olfm3|229759|olfactomedin 3	AK137414|Olfm3|229759|olfactomedin 3	AF442825|Olfm3|229759|olfactomedin 3	NM_153458|Olfm3|229759|olfactomedin 3	BC112422|Olfm3|229759|olfactomedin 3	BC113129|Olfm3|229759|olfactomedin 3
mm9_v1_chr6_+_28430311_28430460	0.585417	HOX{A6,A7,B6,B7}.p2	AK133837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	NM_019776|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK167576|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK159837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK088028|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK161591|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AB021491|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK034914|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK162432|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	BC007126|Snd1|56463|staphylococcal nuclease and tudor domain containing 1
mm9_v1_chr15_-_36094462_36094638	0.581597	HOX{A6,A7,B6,B7}.p2	AK030012|Fbxo43|78803|F-box protein 43	AK019714|Fbxo43|78803|F-box protein 43	BC098484|Fbxo43|78803|F-box protein 43	NM_001081253|Fbxo43|78803|F-box protein 43
mm9_v1_chr15_-_101681183_101681224	0.581117	HOX{A6,A7,B6,B7}.p2	BC117842|Krt1|16678|keratin 1	BC117843|Krt1|16678|keratin 1	AK019521|Krt1|16678|keratin 1	NM_008473|Krt1|16678|keratin 1	M10937|Krt1|16678|keratin 1
mm9_v1_chr13_-_12432984_12433003	0.580079	HOX{A6,A7,B6,B7}.p2	AY036877|Actn2|11472|actinin alpha 2	AK047768|Actn2|11472|actinin alpha 2	BC089579|Actn2|11472|actinin alpha 2	NM_033268|Actn2|11472|actinin alpha 2
mm9_v1_chr7_-_88638540_88638668	0.579906	HOX{A6,A7,B6,B7}.p2	BC024722|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	AK134504|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	BC139378|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	BC139379|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	AY528675|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit	AK138496|Ap3b2|11775|adaptor-related protein complex 3, beta 2 subunit
mm9_v1_chr10_-_90633199_90633208	0.579821	HOX{A6,A7,B6,B7}.p2	AK159161|Tmpo|21917|thymopoietin
mm9_v1_chr15_+_79178063_79178107	0.579305	HOX{A6,A7,B6,B7}.p2	BC022952|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	NM_010755|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr17_+_56239829_56239958	0.579151	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr12_-_40764514_40764542	0.579071	HOX{A6,A7,B6,B7}.p2	AK006286|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr12_-_74387687_74387697	0.578495	HOX{A6,A7,B6,B7}.p2	BC012521|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	AK049127|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	AK011576|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	NM_029580|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)
mm9_v1_chr7_-_86275845_86275903	0.577953	HOX{A6,A7,B6,B7}.p2	AY269788|Hapln3|67666|hyaluronan and proteoglycan link protein 3	BC110474|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AK017865|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AK136956|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AK016123|Hapln3|67666|hyaluronan and proteoglycan link protein 3	AY262757|Hapln3|67666|hyaluronan and proteoglycan link protein 3	NM_178255|Hapln3|67666|hyaluronan and proteoglycan link protein 3
mm9_v1_chr15_-_102341090_102341132	0.576787	HOX{A6,A7,B6,B7}.p2	AK166435|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12
mm9_v1_chr18_+_46757333_46757491	0.574442	HOX{A6,A7,B6,B7}.p2	AK019451|Eif1a|13664|eukaryotic translation initiation factor 1A	NM_010120|Eif1a|13664|eukaryotic translation initiation factor 1A	AK013268|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150651|Eif1a|13664|eukaryotic translation initiation factor 1A	AF026481|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150673|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150677|Eif1a|13664|eukaryotic translation initiation factor 1A	AK009026|Eif1a|13664|eukaryotic translation initiation factor 1A	AK166368|Eif1a|13664|eukaryotic translation initiation factor 1A	BC027437|Eif1a|13664|eukaryotic translation initiation factor 1A	AK167333|Eif1a|13664|eukaryotic translation initiation factor 1A
mm9_v1_chr11_+_101115016_101115073	0.573063	HOX{A6,A7,B6,B7}.p2	AK150822|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK082933|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK166008|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK145811|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK162230|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK003715|Vps25|28084|vacuolar protein sorting 25 (yeast)	BC029181|Vps25|28084|vacuolar protein sorting 25 (yeast)	NM_026776|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK002500|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK003877|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK005149|Vps25|28084|vacuolar protein sorting 25 (yeast)
mm9_v1_chr14_-_27262085_27262124	0.572272	HOX{A6,A7,B6,B7}.p2	AK146685|Slmap|83997|sarcolemma associated protein	AF304451|Slmap|83997|sarcolemma associated protein	AK044358|Slmap|83997|sarcolemma associated protein
mm9_v1_chr19_+_29064837_29064856	0.571995	HOX{A6,A7,B6,B7}.p2	AK016651|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK076231|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK078468|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK165398|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr10_+_93661777_93661836	0.571258	HOX{A6,A7,B6,B7}.p2	AK003131|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK003322|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK008876|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK032774|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK134765|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK153240|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK167943|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm9_v1_chr6_+_129483215_129483234	0.570265	HOX{A6,A7,B6,B7}.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr14_+_21520038_21520084	0.569337	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr1_+_174242443_174242549	0.568985	HOX{A6,A7,B6,B7}.p2	AK158522|Igsf8|140559|immunoglobulin superfamily, member 8	AK146221|Igsf8|140559|immunoglobulin superfamily, member 8	AK150239|Igsf8|140559|immunoglobulin superfamily, member 8	AK168363|Igsf8|140559|immunoglobulin superfamily, member 8	AK140254|Igsf8|140559|immunoglobulin superfamily, member 8	AK146104|Igsf8|140559|immunoglobulin superfamily, member 8	BC048387|Igsf8|140559|immunoglobulin superfamily, member 8	NM_080419|Igsf8|140559|immunoglobulin superfamily, member 8
mm9_v1_chr6_-_89795530_89795608	0.568712	HOX{A6,A7,B6,B7}.p2	NM_053221|Vmn1r42|113848|vomeronasal 1 receptor 42	BC125372|Vmn1r42|113848|vomeronasal 1 receptor 42
mm9_v1_chr12_-_86621317_86621389	0.567505	HOX{A6,A7,B6,B7}.p2	AK018832|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC116781|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC116783|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC096417|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	BC061088|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	AK007244|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	AK027969|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	AK004176|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type	NM_025421|Acyp1|66204|acylphosphatase 1, erythrocyte (common) type
mm9_v1_chr2_-_155479292_155479385	0.567162	HOX{A6,A7,B6,B7}.p2	BC003931|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein
mm9_v1_chr7_-_137409683_137409704	0.565599	HOX{A6,A7,B6,B7}.p2	M86441|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr5_+_77269623_77269643	0.56528	HOX{A6,A7,B6,B7}.p2	AK030106|C530008M17Rik|320827|RIKEN cDNA C530008M17 gene	NM_001163793|C530008M17Rik|320827|RIKEN cDNA C530008M17 gene	AK015929|C530008M17Rik|320827|RIKEN cDNA C530008M17 gene
mm9_v1_chr5_+_147196560_147196581	0.565166	HOX{A6,A7,B6,B7}.p2	AK044481|Wasf3|245880|WAS protein family, member 3	BC027038|Wasf3|245880|WAS protein family, member 3	NM_145155|Wasf3|245880|WAS protein family, member 3
mm9_v1_chr1_-_170362244_170362272	0.561122	HOX{A6,A7,B6,B7}.p2	BC054376|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK037006|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr11_+_96874882_96874882	0.559841	HOX{A6,A7,B6,B7}.p2	AY338955|Sp6|83395|trans-acting transcription factor 6	NM_031183|Sp6|83395|trans-acting transcription factor 6
mm9_v1_chr12_-_28027541_28027588	0.559445	HOX{A6,A7,B6,B7}.p2	AK146514|Sox11|20666|SRY-box containing gene 11	AF009414|Sox11|20666|SRY-box containing gene 11	BC078643|Sox11|20666|SRY-box containing gene 11	AK165693|Sox11|20666|SRY-box containing gene 11	AK165005|Sox11|20666|SRY-box containing gene 11	NM_009234|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr9_+_21807437_21807509	0.558476	HOX{A6,A7,B6,B7}.p2	AK153931|Prkcsh|19089|protein kinase C substrate 80K-H	AK159705|Prkcsh|19089|protein kinase C substrate 80K-H	AK137661|Prkcsh|19089|protein kinase C substrate 80K-H	NM_008925|Prkcsh|19089|protein kinase C substrate 80K-H	U92794|Prkcsh|19089|protein kinase C substrate 80K-H	BC009816|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr17_-_84587162_84587254	0.558391	HOX{A6,A7,B6,B7}.p2	BC139416|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2	BC028330|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2
mm9_v1_chr18_-_57134974_57135060	0.558203	HOX{A6,A7,B6,B7}.p2	BC116244|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	BC116245|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	BC127172|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK021208|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK053997|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK140255|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	NM_029909|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene
mm9_v1_chr5_-_38215607_38215829	0.557899	HOX{A6,A7,B6,B7}.p2	AF308572|Msx1|17701|homeobox, msh-like 1	X14759|Msx1|17701|homeobox, msh-like 1	X59251|Msx1|17701|homeobox, msh-like 1	BC016426|Msx1|17701|homeobox, msh-like 1	AK077524|Msx1|17701|homeobox, msh-like 1	AK145726|Msx1|17701|homeobox, msh-like 1	AK078600|Msx1|17701|homeobox, msh-like 1	NM_010835|Msx1|17701|homeobox, msh-like 1
mm9_v1_chr2_-_58419236_58419238	0.557267	HOX{A6,A7,B6,B7}.p2	AK150014|Acvr1|11477|activin A receptor, type 1	AK150075|Acvr1|11477|activin A receptor, type 1	NM_001110204|Acvr1|11477|activin A receptor, type 1	NM_001110205|Acvr1|11477|activin A receptor, type 1	NM_007394|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr4_+_151413427_151413471	0.55647	HOX{A6,A7,B6,B7}.p2	AK047599|Nol9|74035|nucleolar protein 9	AK164493|Nol9|74035|nucleolar protein 9	NM_001159599|Nol9|74035|nucleolar protein 9	NM_028727|Nol9|74035|nucleolar protein 9	BC024877|Nol9|74035|nucleolar protein 9	AK172043|Nol9|74035|nucleolar protein 9	AK014568|Nol9|74035|nucleolar protein 9	AK050948|Nol9|74035|nucleolar protein 9	AK157956|Nol9|74035|nucleolar protein 9	BC125432|Nol9|74035|nucleolar protein 9	BC132099|Nol9|74035|nucleolar protein 9	AK157398|Nol9|74035|nucleolar protein 9	AK079935|Nol9|74035|nucleolar protein 9	AK046761|Nol9|74035|nucleolar protein 9	BC096599|Nol9|74035|nucleolar protein 9	AK042581|Nol9|74035|nucleolar protein 9	BC051109|Nol9|74035|nucleolar protein 9
mm9_v1_chr15_-_98637560_98637620	0.556225	HOX{A6,A7,B6,B7}.p2	AK164154|Ddn|13199|dendrin
mm9_v1_chr19_-_5503750_5503786	0.555653	HOX{A6,A7,B6,B7}.p2	AF319980|1700020D05Rik|75555|RIKEN cDNA 1700020D05 gene	BC049585|1700020D05Rik|75555|RIKEN cDNA 1700020D05 gene	BC061091|1700020D05Rik|75555|RIKEN cDNA 1700020D05 gene	AK006150|1700020D05Rik|75555|RIKEN cDNA 1700020D05 gene	NM_023781|1700020D05Rik|75555|RIKEN cDNA 1700020D05 gene
mm9_v1_chr9_+_31088156_31088173	0.551791	HOX{A6,A7,B6,B7}.p2	BC064128|Prdm10|382066|PR domain containing 10
mm9_v1_chr13_+_21845991_21845991	0.550097	HOX{A6,A7,B6,B7}.p2	NM_178201|Hist1h2bn|319187|histone cluster 1, H2bn
mm9_v1_chr4_+_84851029_84851075	0.549004	HOX{A6,A7,B6,B7}.p2	AK035210|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr5_+_3657003_3657179	0.549003	HOX{A6,A7,B6,B7}.p2	AK015666|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	NM_029141|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	NM_029154|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	BC115681|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	AK019559|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	AK015761|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene
mm9_v1_chr12_+_113858217_113858317	0.547934	HOX{A6,A7,B6,B7}.p2	AK146907|Adssl1|11565|adenylosuccinate synthetase like 1	NM_007421|Adssl1|11565|adenylosuccinate synthetase like 1	AK089520|Adssl1|11565|adenylosuccinate synthetase like 1	AK149634|Adssl1|11565|adenylosuccinate synthetase like 1	AK150874|Adssl1|11565|adenylosuccinate synthetase like 1	M74495|Adssl1|11565|adenylosuccinate synthetase like 1	BC039943|Adssl1|11565|adenylosuccinate synthetase like 1
mm9_v1_chr11_-_11708917_11708964	0.547841	HOX{A6,A7,B6,B7}.p2	BC051942|Fignl1|60530|fidgetin-like 1	BC052415|Fignl1|60530|fidgetin-like 1	AK082092|Fignl1|60530|fidgetin-like 1	AK143850|Fignl1|60530|fidgetin-like 1	AK051324|Fignl1|60530|fidgetin-like 1	AK051874|Fignl1|60530|fidgetin-like 1	AK088574|Fignl1|60530|fidgetin-like 1	AK086769|Fignl1|60530|fidgetin-like 1	NM_001163359|Fignl1|60530|fidgetin-like 1	NM_001163360|Fignl1|60530|fidgetin-like 1	NM_021891|Fignl1|60530|fidgetin-like 1
mm9_v1_chr4_+_128670474_128670574	0.546991	HOX{A6,A7,B6,B7}.p2	AK050133|Ak2|11637|adenylate kinase 2	AK167797|Ak2|11637|adenylate kinase 2	NM_001033966|Ak2|11637|adenylate kinase 2	AK168148|Ak2|11637|adenylate kinase 2	AB020202|Ak2|11637|adenylate kinase 2	AK168056|Ak2|11637|adenylate kinase 2	AK010936|Ak2|11637|adenylate kinase 2	AK010951|Ak2|11637|adenylate kinase 2	AK077519|Ak2|11637|adenylate kinase 2	BC008610|Ak2|11637|adenylate kinase 2	NM_016895|Ak2|11637|adenylate kinase 2	AK166976|Ak2|11637|adenylate kinase 2
mm9_v1_chr18_-_36926866_36926900	0.545768	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_20188580_20188591	0.545112	HOX{A6,A7,B6,B7}.p2	AB080582|Clasrp|53609|CLK4-associating serine/arginine rich protein	AB080583|Clasrp|53609|CLK4-associating serine/arginine rich protein
mm9_v1_chr18_-_56721860_56721900	0.544156	HOX{A6,A7,B6,B7}.p2	AK160117|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1	AK145873|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1	AK169195|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr11_+_98667577_98667599	0.542866	HOX{A6,A7,B6,B7}.p2	AK031902|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr1_+_133724553_133724859	0.542863	HOX{A6,A7,B6,B7}.p2	BC096596|Slc41a1|98396|solute carrier family 41, member 1	AK089802|Slc41a1|98396|solute carrier family 41, member 1	NM_173865|Slc41a1|98396|solute carrier family 41, member 1	AK045861|Slc41a1|98396|solute carrier family 41, member 1	AK154819|Slc41a1|98396|solute carrier family 41, member 1	BC042724|Slc41a1|98396|solute carrier family 41, member 1	BC116280|Slc41a1|98396|solute carrier family 41, member 1	BC116281|Slc41a1|98396|solute carrier family 41, member 1	AK039371|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr15_-_76853069_76853216	0.542161	HOX{A6,A7,B6,B7}.p2	AK137456|Mb|17189|myoglobin	NM_001164048|Mb|17189|myoglobin	NM_001164047|Mb|17189|myoglobin
mm9_v1_chr2_-_165981138_165981162	0.541855	HOX{A6,A7,B6,B7}.p2	AK081643|Sulf2|72043|sulfatase 2	BC062900|Sulf2|72043|sulfatase 2	AK133336|Sulf2|72043|sulfatase 2	NM_028072|Sulf2|72043|sulfatase 2	AK034712|Sulf2|72043|sulfatase 2
mm9_v1_chr11_+_79997341_79997544	0.540569	HOX{A6,A7,B6,B7}.p2	AK010429|Rnf135|71956|ring finger protein 135	NM_028019|Rnf135|71956|ring finger protein 135	AK150921|Rnf135|71956|ring finger protein 135	BC132307|Rnf135|71956|ring finger protein 135	BC138303|Rnf135|71956|ring finger protein 135	BC145236|Rnf135|71956|ring finger protein 135	AK152096|Rnf135|71956|ring finger protein 135	BC096385|Rnf135|71956|ring finger protein 135	AK002781|Rnf135|71956|ring finger protein 135
mm9_v1_chr19_-_29101759_29101824	0.540446	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_34497840_34497946	0.539676	HOX{A6,A7,B6,B7}.p2	NM_001007589|Akirin2|433693|akirin 2	BC082305|Akirin2|433693|akirin 2
mm9_v1_chr14_-_73764361_73764430	0.539671	HOX{A6,A7,B6,B7}.p2	AK008861|Itm2b|16432|integral membrane protein 2B	AK210559|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr3_-_94277495_94277512	0.538201	HOX{A6,A7,B6,B7}.p2	BC107021|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	AK009192|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	NM_025506|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr11_+_84339151_84339188	0.536844	HOX{A6,A7,B6,B7}.p2	AK018772|1500016L03Rik|78365|RIKEN cDNA 1500016L03 gene
mm9_v1_chr14_+_32978974_32978989	0.53533	HOX{A6,A7,B6,B7}.p2	AK146384|Ncoa4|27057|nuclear receptor coactivator 4	AK014479|Ncoa4|27057|nuclear receptor coactivator 4	AK147036|Ncoa4|27057|nuclear receptor coactivator 4	NM_019744|Ncoa4|27057|nuclear receptor coactivator 4	AK146649|Ncoa4|27057|nuclear receptor coactivator 4	AF159461|Ncoa4|27057|nuclear receptor coactivator 4
mm9_v1_chr7_-_91100033_91100106	0.534775	HOX{A6,A7,B6,B7}.p2	BC056981|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	BC086772|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene
mm9_v1_chr6_-_131338282_131338457	0.533611	HOX{A6,A7,B6,B7}.p2	AF248546|Csda|56449|cold shock domain protein A	AF248547|Csda|56449|cold shock domain protein A	AF246224|Csda|56449|cold shock domain protein A	AK003145|Csda|56449|cold shock domain protein A	AK076041|Csda|56449|cold shock domain protein A	D14485|Csda|56449|cold shock domain protein A	BC048242|Csda|56449|cold shock domain protein A	BC062377|Csda|56449|cold shock domain protein A
mm9_v1_chr4_-_135429471_135429602	0.533285	HOX{A6,A7,B6,B7}.p2	AK218125|Pnrc2|52830|proline-rich nuclear receptor coactivator 2	AK077403|Pnrc2|52830|proline-rich nuclear receptor coactivator 2
mm9_v1_chr1_-_193399412_193399424	0.532102	HOX{A6,A7,B6,B7}.p2	NM_029766|Dtl|76843|denticleless homolog (Drosophila)
mm9_v1_chrX_+_68809092_68809096	0.532047	HOX{A6,A7,B6,B7}.p2	AK141399|Hmgb3|15354|high mobility group box 3	AK146795|Hmgb3|15354|high mobility group box 3
mm9_v1_chr6_-_125141525_125141634	0.531866	HOX{A6,A7,B6,B7}.p2	BC029133|Ncapd2|68298|non-SMC condensin I complex, subunit D2	AK129068|Ncapd2|68298|non-SMC condensin I complex, subunit D2	BC026982|Ncapd2|68298|non-SMC condensin I complex, subunit D2	NM_146171|Ncapd2|68298|non-SMC condensin I complex, subunit D2	BC025460|Ncapd2|68298|non-SMC condensin I complex, subunit D2	AK156143|Ncapd2|68298|non-SMC condensin I complex, subunit D2
mm9_v1_chr3_-_92822980_92822984	0.529455	HOX{A6,A7,B6,B7}.p2	AK003825|Lce1m|66203|late cornified envelope 1M	AK019517|Lce1m|66203|late cornified envelope 1M	AK004318|Lce1m|66203|late cornified envelope 1M	BC109181|Lce1m|66203|late cornified envelope 1M	BC109182|Lce1m|66203|late cornified envelope 1M	NM_025420|Lce1m|66203|late cornified envelope 1M
mm9_v1_chrX_-_7709907_7709983	0.528855	HOX{A6,A7,B6,B7}.p2	BC080853|Wdr13|73447|WD repeat domain 13	BC057366|Wdr13|73447|WD repeat domain 13	NM_026137|Wdr13|73447|WD repeat domain 13
mm9_v1_chr1_-_165242552_165242739	0.528681	HOX{A6,A7,B6,B7}.p2	AK165914|Prrx1|18933|paired related homeobox 1	AK019503|Prrx1|18933|paired related homeobox 1
mm9_v1_chr9_-_111174027_111174065	0.52847	HOX{A6,A7,B6,B7}.p2	AF250844|Mlh1|17350|mutL homolog 1 (E. coli)	AK163861|Mlh1|17350|mutL homolog 1 (E. coli)	AK168849|Mlh1|17350|mutL homolog 1 (E. coli)	AK145646|Mlh1|17350|mutL homolog 1 (E. coli)	BC021815|Mlh1|17350|mutL homolog 1 (E. coli)
mm9_v1_chr6_+_124758919_124758969	0.527673	HOX{A6,A7,B6,B7}.p2	NM_013539|Spsb2|14794|splA/ryanodine receptor domain and SOCS box containing 2
mm9_v1_chr14_-_21365595_21365800	0.527484	HOX{A6,A7,B6,B7}.p2	BC037668|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AK135203|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	M81483|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AB221678|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	BC066000|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	NM_008914|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform
mm9_v1_chr9_-_119213954_119213965	0.527116	HOX{A6,A7,B6,B7}.p2	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr13_+_118009379_118009441	0.526944	HOX{A6,A7,B6,B7}.p2	NM_010330|Emb|13723|embigin	AK138271|Emb|13723|embigin	AK079570|Emb|13723|embigin
mm9_v1_chr1_-_193399352_193399399	0.526715	HOX{A6,A7,B6,B7}.p2	BC060208|Dtl|76843|denticleless homolog (Drosophila)	AK045014|Dtl|76843|denticleless homolog (Drosophila)	AK054412|Dtl|76843|denticleless homolog (Drosophila)	AK012919|Dtl|76843|denticleless homolog (Drosophila)	AK017855|Dtl|76843|denticleless homolog (Drosophila)	AK133177|Dtl|76843|denticleless homolog (Drosophila)	AK164249|Dtl|76843|denticleless homolog (Drosophila)	AK164999|Dtl|76843|denticleless homolog (Drosophila)	AK169601|Dtl|76843|denticleless homolog (Drosophila)	AB095735|Dtl|76843|denticleless homolog (Drosophila)	AB095736|Dtl|76843|denticleless homolog (Drosophila)	AK154594|Dtl|76843|denticleless homolog (Drosophila)	AK166351|Dtl|76843|denticleless homolog (Drosophila)
mm9_v1_chr4_-_134119533_134119716	0.526503	HOX{A6,A7,B6,B7}.p2	AK198550|Man1c1|230815|mannosidase, alpha, class 1C, member 1
mm9_v1_chr4_+_154353269_154353401	0.526333	HOX{A6,A7,B6,B7}.p2	BC027074|Pank4|269614|pantothenate kinase 4
mm9_v1_chr10_+_117641997_117642023	0.526167	HOX{A6,A7,B6,B7}.p2	AJ249491|Il22|50929|interleukin 22	BC104348|Il22|50929|interleukin 22	BC104349|Il22|50929|interleukin 22	NM_016971|Il22|50929|interleukin 22	BC116235|Il22|50929|interleukin 22
mm9_v1_chr17_+_45643768_45643817	0.525532	HOX{A6,A7,B6,B7}.p2	AK146958|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_198608|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113172|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113779|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	AK167771|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC079844|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr10_+_13220952_13220993	0.525516	HOX{A6,A7,B6,B7}.p2	AK035607|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK151204|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK044790|Fuca2|66848|fucosidase, alpha-L- 2, plasma
mm9_v1_chr10_+_38685309_38685399	0.523327	HOX{A6,A7,B6,B7}.p2	AK053234|Lama4|16775|laminin, alpha 4	NM_010681|Lama4|16775|laminin, alpha 4	AK031189|Lama4|16775|laminin, alpha 4	AK087015|Lama4|16775|laminin, alpha 4	AK164903|Lama4|16775|laminin, alpha 4	U69176|Lama4|16775|laminin, alpha 4
mm9_v1_chr16_-_4213389_4213406	0.522836	HOX{A6,A7,B6,B7}.p2	BC072594|Crebbp|12914|CREB binding protein	NM_001025432|Crebbp|12914|CREB binding protein	BC010297|Crebbp|12914|CREB binding protein
mm9_v1_chr13_-_73815446_73815470	0.521702	HOX{A6,A7,B6,B7}.p2	BC010748|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AF075262|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AF075263|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AF075264|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AF075265|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AF075266|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AF075267|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AK085258|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AK085473|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	AK128907|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	NM_001040692|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	NM_001136087|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	NM_001168643|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	NM_001168644|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	NM_001168645|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18	NM_001168646|Slc6a18|22598|solute carrier family 6 (neurotransmitter transporter), member 18
mm9_v1_chr2_-_155984800_155984951	0.52093	HOX{A6,A7,B6,B7}.p2	AK134091|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr19_+_56536148_56536166	0.520533	HOX{A6,A7,B6,B7}.p2	BC090250|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr18_+_40418014_40418040	0.519948	HOX{A6,A7,B6,B7}.p2	NM_026135|Kctd16|383348|potassium channel tetramerisation domain containing 16	AK220381|Kctd16|383348|potassium channel tetramerisation domain containing 16
mm9_v1_chr8_+_28479182_28479253	0.518591	HOX{A6,A7,B6,B7}.p2	AK030464|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	NM_027454|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	NM_173212|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	AK133689|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	AK017571|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3
mm9_v1_chr7_-_140974399_140974445	0.518063	HOX{A6,A7,B6,B7}.p2	AK028910|Dhx32|101437|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm9_v1_chr6_-_106750030_106750092	0.51735	HOX{A6,A7,B6,B7}.p2	AF229032|Crbn|58799|cereblon	BC069905|Crbn|58799|cereblon	BC033458|Crbn|58799|cereblon	BC086488|Crbn|58799|cereblon	AK032836|Crbn|58799|cereblon	AK075959|Crbn|58799|cereblon	AK141428|Crbn|58799|cereblon	AK076144|Crbn|58799|cereblon	AK077707|Crbn|58799|cereblon	AK160219|Crbn|58799|cereblon	AK050557|Crbn|58799|cereblon	NM_021449|Crbn|58799|cereblon	NM_175357|Crbn|58799|cereblon
mm9_v1_chr3_+_145587194_145587422	0.517301	HOX{A6,A7,B6,B7}.p2	AK171687|Bcl10|12042|B-cell leukemia/lymphoma 10	AK156890|Bcl10|12042|B-cell leukemia/lymphoma 10	AK076082|Bcl10|12042|B-cell leukemia/lymphoma 10	AK172158|Bcl10|12042|B-cell leukemia/lymphoma 10	BC003703|Bcl10|12042|B-cell leukemia/lymphoma 10	AK169126|Bcl10|12042|B-cell leukemia/lymphoma 10	AK146236|Bcl10|12042|B-cell leukemia/lymphoma 10	AK168084|Bcl10|12042|B-cell leukemia/lymphoma 10	AK150883|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152563|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152847|Bcl10|12042|B-cell leukemia/lymphoma 10	AF057701|Bcl10|12042|B-cell leukemia/lymphoma 10	AF100339|Bcl10|12042|B-cell leukemia/lymphoma 10	AF134396|Bcl10|12042|B-cell leukemia/lymphoma 10	NM_009740|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172007|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172009|Bcl10|12042|B-cell leukemia/lymphoma 10	AJ006289|Bcl10|12042|B-cell leukemia/lymphoma 10	BC024379|Bcl10|12042|B-cell leukemia/lymphoma 10	AK140179|Bcl10|12042|B-cell leukemia/lymphoma 10	AF127387|Bcl10|12042|B-cell leukemia/lymphoma 10
mm9_v1_chrX_+_68809128_68809157	0.517277	HOX{A6,A7,B6,B7}.p2	BC011276|Hmgb3|15354|high mobility group box 3	BC158037|Hmgb3|15354|high mobility group box 3
mm9_v1_chr11_+_97177029_97177191	0.516136	HOX{A6,A7,B6,B7}.p2	NM_025927|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011163|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011605|Mrpl45|67036|mitochondrial ribosomal protein L45	AK081922|Mrpl45|67036|mitochondrial ribosomal protein L45	AK157771|Mrpl45|67036|mitochondrial ribosomal protein L45	BC020130|Mrpl45|67036|mitochondrial ribosomal protein L45	AK198473|Mrpl45|67036|mitochondrial ribosomal protein L45
mm9_v1_chr8_+_90668448_90668453	0.516045	HOX{A6,A7,B6,B7}.p2	BC030373|Heatr3|234549|HEAT repeat containing 3
mm9_v1_chr15_+_82000246_82000509	0.515996	HOX{A6,A7,B6,B7}.p2	BC023333|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr15_-_35867898_35868000	0.515888	HOX{A6,A7,B6,B7}.p2	BC024666|Cox6c|12864|cytochrome c oxidase, subunit VIc	AK013459|Cox6c|12864|cytochrome c oxidase, subunit VIc	AK012602|Cox6c|12864|cytochrome c oxidase, subunit VIc	AK156268|Cox6c|12864|cytochrome c oxidase, subunit VIc	NM_053071|Cox6c|12864|cytochrome c oxidase, subunit VIc
mm9_v1_chr4_-_132478424_132478474	0.515771	HOX{A6,A7,B6,B7}.p2	BC008163|Fam76a|230789|family with sequence similarity 76, member A	AK154575|Fam76a|230789|family with sequence similarity 76, member A	NM_001163792|Fam76a|230789|family with sequence similarity 76, member A	NM_145553|Fam76a|230789|family with sequence similarity 76, member A	AK038831|Fam76a|230789|family with sequence similarity 76, member A
mm9_v1_chr10_+_21713669_21713695	0.514315	HOX{A6,A7,B6,B7}.p2	NM_001161850|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr9_-_72257565_72257749	0.514009	HOX{A6,A7,B6,B7}.p2	BC065403|BC065403|77936|cDNA sequence BC065403	AK020810|BC065403|77936|cDNA sequence BC065403
mm9_v1_chr10_-_126725826_126725958	0.513244	HOX{A6,A7,B6,B7}.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr16_-_26526854_26526915	0.512939	HOX{A6,A7,B6,B7}.p2	AK142524|Tmem207|100043057|transmembrane protein 207	NM_001101640|Tmem207|100043057|transmembrane protein 207
mm9_v1_chr1_-_65097587_65097736	0.512235	HOX{A6,A7,B6,B7}.p2	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr5_+_114454810_114454816	0.51094	HOX{A6,A7,B6,B7}.p2	BC018377|Dao|13142|D-amino acid oxidase
mm9_v1_chr1_-_71632834_71632860	0.510804	HOX{A6,A7,B6,B7}.p2	BC020287|Fn1|14268|fibronectin 1
mm9_v1_chr11_+_74743743_74743795	0.510647	HOX{A6,A7,B6,B7}.p2	AK129203|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr11_+_96055668_96055674	0.510169	HOX{A6,A7,B6,B7}.p2	BC013639|Hoxb13|15408|homeobox B13	NM_008267|Hoxb13|15408|homeobox B13
mm9_v1_chr9_+_86636433_86636473	0.510091	HOX{A6,A7,B6,B7}.p2	NM_178738|Prss35|244954|protease, serine, 35	AK030671|Prss35|244954|protease, serine, 35	AK031411|Prss35|244954|protease, serine, 35	AK031644|Prss35|244954|protease, serine, 35	AK076281|Prss35|244954|protease, serine, 35	BC075675|Prss35|244954|protease, serine, 35	DQ223037|Prss35|244954|protease, serine, 35
mm9_v1_chrX_-_91787351_91787352	0.507624	HOX{A6,A7,B6,B7}.p2	BC031461|Maged1|94275|melanoma antigen, family D, 1
mm9_v1_chr15_-_102347249_102347300	0.50666	HOX{A6,A7,B6,B7}.p2	AK034374|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12	BC057572|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12
mm9_v1_chr6_-_115758729_115758768	0.505323	HOX{A6,A7,B6,B7}.p2	BC046339|Rpl32|19951|ribosomal protein L32	BC030176|Rpl32|19951|ribosomal protein L32	AK002353|Rpl32|19951|ribosomal protein L32	AK011017|Rpl32|19951|ribosomal protein L32	AK012525|Rpl32|19951|ribosomal protein L32	AK028204|Rpl32|19951|ribosomal protein L32	AK146768|Rpl32|19951|ribosomal protein L32	AK148453|Rpl32|19951|ribosomal protein L32	AK150705|Rpl32|19951|ribosomal protein L32	AK168282|Rpl32|19951|ribosomal protein L32	NM_172086|Rpl32|19951|ribosomal protein L32	BC086909|Rpl32|19951|ribosomal protein L32
mm9_v1_chr12_-_105101743_105101767	0.505077	HOX{A6,A7,B6,B7}.p2	BC011040|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC037007|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC047128|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC049970|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	M75721|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	AK146619|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC057982|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC012874|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr11_-_116714173_116714405	0.50474	HOX{A6,A7,B6,B7}.p2	AK204489|Srsf2|20382|serine/arginine-rich splicing factor 2	L13610|Srsf2|20382|serine/arginine-rich splicing factor 2	BC005493|Srsf2|20382|serine/arginine-rich splicing factor 2	AF077858|Srsf2|20382|serine/arginine-rich splicing factor 2	U14648|Srsf2|20382|serine/arginine-rich splicing factor 2	AK161873|Srsf2|20382|serine/arginine-rich splicing factor 2	AK011528|Srsf2|20382|serine/arginine-rich splicing factor 2	AK076448|Srsf2|20382|serine/arginine-rich splicing factor 2	AK086103|Srsf2|20382|serine/arginine-rich splicing factor 2	AK088042|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr9_+_23027519_23027519	0.504306	HOX{A6,A7,B6,B7}.p2	AF454954|Bmper|73230|BMP-binding endothelial regulator	NM_028472|Bmper|73230|BMP-binding endothelial regulator
mm9_v1_chr10_+_127774778_127774839	0.504172	HOX{A6,A7,B6,B7}.p2	AK149990|Cs|12974|citrate synthase	AK010298|Cs|12974|citrate synthase
mm9_v1_chr4_-_115726466_115726490	0.503457	HOX{A6,A7,B6,B7}.p2	AK012994|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4	NM_028142|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr6_-_85452851_85452987	0.502956	HOX{A6,A7,B6,B7}.p2	AK147681|Fbxo41|330369|F-box protein 41	AK147230|Fbxo41|330369|F-box protein 41	NM_001001160|Fbxo41|330369|F-box protein 41	BC070445|Fbxo41|330369|F-box protein 41
mm9_v1_chrX_-_8166330_8166371	0.501273	HOX{A6,A7,B6,B7}.p2	AY244798|Ssxb7|387284|synovial sarcoma, X member B, breakpoint 7	AY244794|Ssxb3|278174|synovial sarcoma, X member B, breakpoint 3	BC132618|Ssxb3|278174|synovial sarcoma, X member B, breakpoint 3	BC132644|Ssxb3|278174|synovial sarcoma, X member B, breakpoint 3	NM_198898|Ssxb3|278174|synovial sarcoma, X member B, breakpoint 3
mm9_v1_chr16_-_23520662_23520727	0.501216	HOX{A6,A7,B6,B7}.p2	BC131637|Masp1|17174|mannan-binding lectin serine peptidase 1	BC131638|Masp1|17174|mannan-binding lectin serine peptidase 1	NM_008555|Masp1|17174|mannan-binding lectin serine peptidase 1	AK032944|Masp1|17174|mannan-binding lectin serine peptidase 1	AB049755|Masp1|17174|mannan-binding lectin serine peptidase 1	D16492|Masp1|17174|mannan-binding lectin serine peptidase 1	AK043055|Masp1|17174|mannan-binding lectin serine peptidase 1	AK031598|Masp1|17174|mannan-binding lectin serine peptidase 1
mm9_v1_chr13_-_101500801_101500875	0.500453	HOX{A6,A7,B6,B7}.p2	AK145759|Cdk7|12572|cyclin-dependent kinase 7	U11822|Cdk7|12572|cyclin-dependent kinase 7	BC141043|Cdk7|12572|cyclin-dependent kinase 7	BC004605|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr9_+_13553629_13553630	0.499279	HOX{A6,A7,B6,B7}.p2	AK133476|Mtmr2|77116|myotubularin related protein 2
mm9_v1_chr2_-_23011403_23011543	0.497432	HOX{A6,A7,B6,B7}.p2	AK078365|Mastl|67121|microtubule associated serine/threonine kinase-like	BC103779|Mastl|67121|microtubule associated serine/threonine kinase-like	AK030140|Mastl|67121|microtubule associated serine/threonine kinase-like	NM_025979|Mastl|67121|microtubule associated serine/threonine kinase-like
mm9_v1_chr9_+_7445821_7445879	0.496708	HOX{A6,A7,B6,B7}.p2	NM_010809|Mmp3|17392|matrix metallopeptidase 3	X63162|Mmp3|17392|matrix metallopeptidase 3	AK148467|Mmp3|17392|matrix metallopeptidase 3	BC006725|Mmp3|17392|matrix metallopeptidase 3	X66402|Mmp3|17392|matrix metallopeptidase 3
mm9_v1_chr1_-_60154977_60155020	0.494997	HOX{A6,A7,B6,B7}.p2	NM_001199061|Wdr12|57750|WD repeat domain 12	AK161299|Wdr12|57750|WD repeat domain 12	BC004748|Wdr12|57750|WD repeat domain 12	AK016611|Wdr12|57750|WD repeat domain 12
mm9_v1_chr10_-_52058305_52058381	0.494967	HOX{A6,A7,B6,B7}.p2	AK008806|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr6_-_52163065_52163065	0.494683	HOX{A6,A7,B6,B7}.p2	NM_010452|Hoxa3|15400|homeobox A3
mm9_v1_chr15_-_73015227_73015327	0.49464	HOX{A6,A7,B6,B7}.p2	BC128379|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC129922|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	AB081472|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC096465|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2
mm9_v1_chr10_+_106708886_106708980	0.494635	HOX{A6,A7,B6,B7}.p2	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr19_+_31943250_31943302	0.493841	HOX{A6,A7,B6,B7}.p2	NM_001081074|A1cf|69865|APOBEC1 complementation factor	AY566862|A1cf|69865|APOBEC1 complementation factor	AY566863|A1cf|69865|APOBEC1 complementation factor	AY566864|A1cf|69865|APOBEC1 complementation factor	AK007970|A1cf|69865|APOBEC1 complementation factor	BC089622|A1cf|69865|APOBEC1 complementation factor
mm9_v1_chr11_+_102254816_102254873	0.491161	HOX{A6,A7,B6,B7}.p2	BC046319|Rundc3a|51799|RUN domain containing 3A
mm9_v1_chr6_+_145159653_145159723	0.490536	HOX{A6,A7,B6,B7}.p2	NM_001163628|Lyrm5|67636|LYR motif containing 5	AF412300|Lyrm5|67636|LYR motif containing 5	NM_133688|Lyrm5|67636|LYR motif containing 5	AY753325|Lyrm5|67636|LYR motif containing 5	AF412298|Lyrm5|67636|LYR motif containing 5	AK075835|Lyrm5|67636|LYR motif containing 5	AF412299|Lyrm5|67636|LYR motif containing 5	AK015530|Lyrm5|67636|LYR motif containing 5	AK046179|Lyrm5|67636|LYR motif containing 5	BC021522|Lyrm5|67636|LYR motif containing 5
mm9_v1_chr3_-_133207209_133207353	0.488932	HOX{A6,A7,B6,B7}.p2	AK155776|Tet2|214133|tet oncogene family member 2	DQ079067|Tet2|214133|tet oncogene family member 2	NM_001040400|Tet2|214133|tet oncogene family member 2
mm9_v1_chr2_+_131735663_131735721	0.48803	HOX{A6,A7,B6,B7}.p2	NM_011170|Prnp|19122|prion protein	AK148061|Prnp|19122|prion protein	AK158908|Prnp|19122|prion protein	AK159056|Prnp|19122|prion protein	AK162504|Prnp|19122|prion protein	AK148892|Prnp|19122|prion protein	AK157840|Prnp|19122|prion protein	AK150963|Prnp|19122|prion protein	AK159224|Prnp|19122|prion protein	AK160091|Prnp|19122|prion protein
mm9_v1_chr8_+_59029896_59029998	0.48752	HOX{A6,A7,B6,B7}.p2	AK077595|Fbxo8|50753|F-box protein 8	AK078111|Fbxo8|50753|F-box protein 8	AK012401|Fbxo8|50753|F-box protein 8	AK147748|Fbxo8|50753|F-box protein 8	AK162592|Fbxo8|50753|F-box protein 8	AK002538|Fbxo8|50753|F-box protein 8	BC011100|Fbxo8|50753|F-box protein 8	AF176527|Fbxo8|50753|F-box protein 8	AK029989|Fbxo8|50753|F-box protein 8	NM_015791|Fbxo8|50753|F-box protein 8	AK160145|Fbxo8|50753|F-box protein 8	BC034854|Fbxo8|50753|F-box protein 8
mm9_v1_chr9_-_65756482_65756602	0.48743	HOX{A6,A7,B6,B7}.p2	AF539614|Trip4|56404|thyroid hormone receptor interactor 4	AK016170|Trip4|56404|thyroid hormone receptor interactor 4	AK139423|Trip4|56404|thyroid hormone receptor interactor 4	AK166192|Trip4|56404|thyroid hormone receptor interactor 4	NM_019797|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr16_-_36334417_36334427	0.486978	HOX{A6,A7,B6,B7}.p2	AY169235|BC117090|100038854|cDNA sequence BC1179090	BC117064|BC117090|100038854|cDNA sequence BC1179090	BC117090|BC117090|100038854|cDNA sequence BC1179090	NM_001001332|BC117090|100038854|cDNA sequence BC1179090
mm9_v1_chr4_-_148800634_148800700	0.486411	HOX{A6,A7,B6,B7}.p2	BC075620|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr19_+_29064938_29065019	0.486399	HOX{A6,A7,B6,B7}.p2	AK078872|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK161465|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK018787|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK080238|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK012312|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	NM_025950|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	BC031761|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK038578|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK079556|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr12_+_103366928_103366945	0.48616	HOX{A6,A7,B6,B7}.p2	AK044368|Slc24a4|238384|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AK044239|Slc24a4|238384|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm9_v1_chr8_+_73053287_73053425	0.485632	HOX{A6,A7,B6,B7}.p2	BC003739|Fkbp8|14232|FK506 binding protein 8	AY225340|Fkbp8|14232|FK506 binding protein 8	AK216136|Fkbp8|14232|FK506 binding protein 8	AF030635|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr12_+_56937309_56937356	0.485348	HOX{A6,A7,B6,B7}.p2	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr10_+_101974855_101975051	0.484589	HOX{A6,A7,B6,B7}.p2	AK041688|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	NM_146240|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	BC028805|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	AK086855|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	AK033464|Rassf9|237504|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
mm9_v1_chr11_+_78115115_78115156	0.483999	HOX{A6,A7,B6,B7}.p2	AK052228|Spag5|54141|sperm associated antigen 5	BC052672|Spag5|54141|sperm associated antigen 5	AF420307|Spag5|54141|sperm associated antigen 5	X81633|Spag5|54141|sperm associated antigen 5
mm9_v1_chr18_+_42671147_42671160	0.483867	HOX{A6,A7,B6,B7}.p2	AK150312|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AK013830|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AK010571|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr7_-_29910144_29910197	0.481866	HOX{A6,A7,B6,B7}.p2	D21796|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AY268935|Ryr1|20190|ryanodine receptor 1, skeletal muscle	NM_009109|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK081432|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK143310|Ryr1|20190|ryanodine receptor 1, skeletal muscle
mm9_v1_chr1_+_5578546_5578692	0.481674	HOX{A6,A7,B6,B7}.p2	AK039151|Oprk1|18387|opioid receptor, kappa 1	L11065|Oprk1|18387|opioid receptor, kappa 1	NM_011011|Oprk1|18387|opioid receptor, kappa 1	BC116795|Oprk1|18387|opioid receptor, kappa 1	BC119026|Oprk1|18387|opioid receptor, kappa 1	BC144731|Oprk1|18387|opioid receptor, kappa 1	S81111|Oprk1|18387|opioid receptor, kappa 1
mm9_v1_chr11_+_96055686_96055699	0.481462	HOX{A6,A7,B6,B7}.p2	BC051087|Hoxb13|15408|homeobox B13	BC058813|Hoxb13|15408|homeobox B13
mm9_v1_chrX_+_109608882_109608925	0.481043	HOX{A6,A7,B6,B7}.p2	AK017156|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	NM_001168590|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	NM_026333|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	AK008319|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	BC139480|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	BC139481|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene
mm9_v1_chr15_-_99305127_99305160	0.480733	HOX{A6,A7,B6,B7}.p2	BC016225|Bcdin3d|75284|BCDIN3 domain containing	BC078455|Bcdin3d|75284|BCDIN3 domain containing	AK016154|Bcdin3d|75284|BCDIN3 domain containing	NM_029236|Bcdin3d|75284|BCDIN3 domain containing
mm9_v1_chr9_+_83728331_83728347	0.479923	HOX{A6,A7,B6,B7}.p2	AX775731|Ttk|22137|Ttk protein kinase	M86377|Ttk|22137|Ttk protein kinase
mm9_v1_chr8_-_87956606_87956658	0.478739	HOX{A6,A7,B6,B7}.p2	AK007050|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK013123|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC040087|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr2_+_118860522_118860609	0.478446	HOX{A6,A7,B6,B7}.p2	AK041787|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK044767|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117827|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117828|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	NM_173450|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK043340|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK014804|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035752|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035800|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2
mm9_v1_chr1_+_109258889_109258923	0.478133	HOX{A6,A7,B6,B7}.p2	AK009003|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	AK009855|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	NM_025867|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	BC010313|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm9_v1_chr11_+_120459958_120460039	0.477234	HOX{A6,A7,B6,B7}.p2	BC023039|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr14_-_69273768_69273898	0.477197	HOX{A6,A7,B6,B7}.p2	BC058782|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF153350|Adam28|13522|a disintegrin and metallopeptidase domain 28	AK052479|Adam28|13522|a disintegrin and metallopeptidase domain 28	AK036800|Adam28|13522|a disintegrin and metallopeptidase domain 28	AK081736|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163293|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163290|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163291|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163292|Adam28|13522|a disintegrin and metallopeptidase domain 28	NM_001048175|Adam28|13522|a disintegrin and metallopeptidase domain 28	NM_010082|Adam28|13522|a disintegrin and metallopeptidase domain 28	NM_183366|Adam28|13522|a disintegrin and metallopeptidase domain 28
mm9_v1_chr19_+_6085096_6085130	0.476552	HOX{A6,A7,B6,B7}.p2	NM_026410|Cdca5|67849|cell division cycle associated 5	AK011701|Cdca5|67849|cell division cycle associated 5	BC052904|Cdca5|67849|cell division cycle associated 5	AK010540|Cdca5|67849|cell division cycle associated 5
mm9_v1_chr11_+_69804871_69804873	0.475815	HOX{A6,A7,B6,B7}.p2	NM_019749|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC030350|Gabarap|56486|gamma-aminobutyric acid receptor associated protein
mm9_v1_chr19_-_57193391_57193513	0.475378	HOX{A6,A7,B6,B7}.p2	AK078723|Ablim1|226251|actin-binding LIM protein 1	AK165766|Ablim1|226251|actin-binding LIM protein 1	AK172605|Ablim1|226251|actin-binding LIM protein 1	AF404776|Ablim1|226251|actin-binding LIM protein 1	NM_001103178|Ablim1|226251|actin-binding LIM protein 1	AK008893|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr3_-_96512444_96512484	0.473668	HOX{A6,A7,B6,B7}.p2	AK141256|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17	AK031193|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17	AK134929|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17	NM_001162925|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17	NM_030094|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17	AK019109|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17	BC115559|Nudt17|78373|nudix (nucleoside diphosphate linked moiety X)-type motif 17
mm9_v1_chr7_-_81429262_81429274	0.473189	HOX{A6,A7,B6,B7}.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr11_+_29447949_29448025	0.471202	HOX{A6,A7,B6,B7}.p2	AK006591|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	NM_001163521|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	NM_028504|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	BC137683|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	BC144828|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene
mm9_v1_chr13_-_108516475_108516490	0.471183	HOX{A6,A7,B6,B7}.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr19_+_5637741_5637828	0.470229	HOX{A6,A7,B6,B7}.p2	AK089489|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK144565|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK154630|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK155889|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK157076|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	M61909|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	DQ020177|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr9_-_37464614_37464896	0.468742	HOX{A6,A7,B6,B7}.p2	AK185995|Tbrg1|21376|transforming growth factor beta regulated gene 1	DQ144541|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK131638|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151075|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151209|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC054057|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC037145|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK151457|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC040813|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC065795|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC043022|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK166547|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK011268|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK150549|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK003270|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK011614|Tbrg1|21376|transforming growth factor beta regulated gene 1	AK010925|Tbrg1|21376|transforming growth factor beta regulated gene 1	BC021331|Tbrg1|21376|transforming growth factor beta regulated gene 1	NM_025289|Tbrg1|21376|transforming growth factor beta regulated gene 1
mm9_v1_chr6_-_13557981_13558062	0.468356	HOX{A6,A7,B6,B7}.p2	BC024911|Tmem168|101118|transmembrane protein 168	BC007160|Tmem168|101118|transmembrane protein 168	AK054353|Tmem168|101118|transmembrane protein 168	AK152957|Tmem168|101118|transmembrane protein 168	AK034589|Tmem168|101118|transmembrane protein 168	AK170302|Tmem168|101118|transmembrane protein 168	AK018471|Tmem168|101118|transmembrane protein 168	AK051532|Tmem168|101118|transmembrane protein 168	NM_028990|Tmem168|101118|transmembrane protein 168
mm9_v1_chr10_+_43621580_43621645	0.467934	HOX{A6,A7,B6,B7}.p2	AK088029|Rtn4ip1|170728|reticulon 4 interacting protein 1	NM_130892|Rtn4ip1|170728|reticulon 4 interacting protein 1	AK050324|Rtn4ip1|170728|reticulon 4 interacting protein 1	AK085858|Rtn4ip1|170728|reticulon 4 interacting protein 1	BC024116|Rtn4ip1|170728|reticulon 4 interacting protein 1
mm9_v1_chr2_-_160934743_160934810	0.467404	HOX{A6,A7,B6,B7}.p2	BC145629|Chd6|71389|chromodomain helicase DNA binding protein 6	BC150806|Chd6|71389|chromodomain helicase DNA binding protein 6	AK018129|Chd6|71389|chromodomain helicase DNA binding protein 6	AK040495|Chd6|71389|chromodomain helicase DNA binding protein 6	AK142177|Chd6|71389|chromodomain helicase DNA binding protein 6	AK086807|Chd6|71389|chromodomain helicase DNA binding protein 6	AK162083|Chd6|71389|chromodomain helicase DNA binding protein 6	NM_173368|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080892|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080927|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr12_-_110098804_110098955	0.467015	HOX{A6,A7,B6,B7}.p2	AK185973|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr11_+_68933954_68933975	0.465941	HOX{A6,A7,B6,B7}.p2	AK050791|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	BC134378|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	NM_033041|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	AB049065|Hes7|84653|hairy and enhancer of split 7 (Drosophila)
mm9_v1_chr14_+_41918624_41918669	0.465246	HOX{A6,A7,B6,B7}.p2	AK153832|Mat1a|11720|methionine adenosyltransferase I, alpha	AK149542|Mat1a|11720|methionine adenosyltransferase I, alpha	L13622|Mat1a|11720|methionine adenosyltransferase I, alpha	BC011211|Mat1a|11720|methionine adenosyltransferase I, alpha	NM_133653|Mat1a|11720|methionine adenosyltransferase I, alpha
mm9_v1_chr6_+_11875859_11875888	0.465144	HOX{A6,A7,B6,B7}.p2	AK016517|Phf14|75725|PHD finger protein 14	NM_001168382|Phf14|75725|PHD finger protein 14	NM_029404|Phf14|75725|PHD finger protein 14
mm9_v1_chr9_+_44947045_44947124	0.464729	HOX{A6,A7,B6,B7}.p2	BC139399|Scn4b|399548|sodium channel, type IV, beta	BC139400|Scn4b|399548|sodium channel, type IV, beta	AY669079|Scn4b|399548|sodium channel, type IV, beta	NM_001013390|Scn4b|399548|sodium channel, type IV, beta
mm9_v1_chr17_+_73457324_73457400	0.464325	HOX{A6,A7,B6,B7}.p2	NM_001081071|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177967|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177968|Lclat1|225010|lysocardiolipin acyltransferase 1	AK144580|Lclat1|225010|lysocardiolipin acyltransferase 1	BC147499|Lclat1|225010|lysocardiolipin acyltransferase 1	BC150884|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158076|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158079|Lclat1|225010|lysocardiolipin acyltransferase 1
mm9_v1_chr1_+_193541845_193542002	0.46432	HOX{A6,A7,B6,B7}.p2	AK133814|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	NM_172266|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr12_-_41172348_41172381	0.463833	HOX{A6,A7,B6,B7}.p2	AK156529|Zfp277|246196|zinc finger protein 277	BC043453|Zfp277|246196|zinc finger protein 277	AK077401|Zfp277|246196|zinc finger protein 277	AK075945|Zfp277|246196|zinc finger protein 277	AK145060|Zfp277|246196|zinc finger protein 277	NM_172575|Zfp277|246196|zinc finger protein 277	NM_178845|Zfp277|246196|zinc finger protein 277
mm9_v1_chr17_-_37095372_37095414	0.463712	HOX{A6,A7,B6,B7}.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr14_+_64055230_64055357	0.463355	HOX{A6,A7,B6,B7}.p2	NM_177628|Fam167a|219148|family with sequence similarity 167, member A	BC065085|Fam167a|219148|family with sequence similarity 167, member A	BC094561|Fam167a|219148|family with sequence similarity 167, member A
mm9_v1_chr6_-_113369270_113369339	0.462706	HOX{A6,A7,B6,B7}.p2	BC038081|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	AK133871|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	AK076749|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC116825|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC116827|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC144733|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	BC144734|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3	NM_001033204|Rpusd3|101122|RNA pseudouridylate synthase domain containing 3
mm9_v1_chr16_-_55838747_55838771	0.460779	HOX{A6,A7,B6,B7}.p2	AK149946|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	NM_001159395|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	NM_030612|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AB047549|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr18_+_52927362_52927362	0.460144	HOX{A6,A7,B6,B7}.p2	AK132346|Sncaip|67847|synuclein, alpha interacting protein (synphilin)	NM_026408|Sncaip|67847|synuclein, alpha interacting protein (synphilin)
mm9_v1_chr15_-_96529998_96530181	0.459683	HOX{A6,A7,B6,B7}.p2	BC041108|Slc38a2|67760|solute carrier family 38, member 2	BC027259|Slc38a2|67760|solute carrier family 38, member 2	AK129342|Slc38a2|67760|solute carrier family 38, member 2	BC048178|Slc38a2|67760|solute carrier family 38, member 2	NM_175121|Slc38a2|67760|solute carrier family 38, member 2	AK017145|Slc38a2|67760|solute carrier family 38, member 2	AK030917|Slc38a2|67760|solute carrier family 38, member 2	AK031615|Slc38a2|67760|solute carrier family 38, member 2	AK047403|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr16_-_35313780_35313815	0.459641	HOX{A6,A7,B6,B7}.p2	AK085223|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK164647|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr4_-_43512476_43512545	0.459255	HOX{A6,A7,B6,B7}.p2	AK087493|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	BC080700|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	AK153880|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	NM_001013377|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene
mm9_v1_chr11_-_79775842_79775900	0.458773	HOX{A6,A7,B6,B7}.p2	BC018250|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	BC023920|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK084976|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	BC024850|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK029151|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	NM_144826|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK164010|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK169785|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr7_-_133643662_133643692	0.458664	HOX{A6,A7,B6,B7}.p2	BC043451|Atxn2l|233871|ataxin 2-like
mm9_v1_chr1_-_178737254_178737254	0.456329	HOX{A6,A7,B6,B7}.p2	NM_001099637|Cep170|545389|centrosomal protein 170
mm9_v1_chr9_-_34983552_34983647	0.455888	HOX{A6,A7,B6,B7}.p2	AK171018|Dcps|69305|decapping enzyme, scavenger	AK005584|Dcps|69305|decapping enzyme, scavenger	NM_027030|Dcps|69305|decapping enzyme, scavenger	AY040775|Dcps|69305|decapping enzyme, scavenger	AK169641|Dcps|69305|decapping enzyme, scavenger	BC016273|Dcps|69305|decapping enzyme, scavenger	AK078253|Dcps|69305|decapping enzyme, scavenger
mm9_v1_chr2_-_48804672_48804789	0.455817	HOX{A6,A7,B6,B7}.p2	BC019748|Orc4|26428|origin recognition complex, subunit 4	BC015072|Orc4|26428|origin recognition complex, subunit 4	AJ003140|Orc4|26428|origin recognition complex, subunit 4	AK011550|Orc4|26428|origin recognition complex, subunit 4	AK012669|Orc4|26428|origin recognition complex, subunit 4	AK049534|Orc4|26428|origin recognition complex, subunit 4	AK084326|Orc4|26428|origin recognition complex, subunit 4	AK010258|Orc4|26428|origin recognition complex, subunit 4	AK169291|Orc4|26428|origin recognition complex, subunit 4	AK076324|Orc4|26428|origin recognition complex, subunit 4	NM_001177313|Orc4|26428|origin recognition complex, subunit 4	NM_011958|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr3_-_144761960_144762069	0.455637	HOX{A6,A7,B6,B7}.p2	AY161007|Clca5|229933|chloride channel calcium activated 5	AK048276|Clca5|229933|chloride channel calcium activated 5	AK028704|Clca5|229933|chloride channel calcium activated 5	NM_178697|Clca5|229933|chloride channel calcium activated 5	BC096379|Clca5|229933|chloride channel calcium activated 5	AK035512|Clca5|229933|chloride channel calcium activated 5
mm9_v1_chr5_-_66543123_66543228	0.454801	HOX{A6,A7,B6,B7}.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr2_-_60511707_60511810	0.454634	HOX{A6,A7,B6,B7}.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr11_+_109334649_109334687	0.452797	HOX{A6,A7,B6,B7}.p2	AK158726|Arsg|74008|arylsulfatase G	NM_028710|Arsg|74008|arylsulfatase G
mm9_v1_chr14_+_75721556_75721651	0.452789	HOX{A6,A7,B6,B7}.p2	BC094575|Zc3h13|67302|zinc finger CCCH type containing 13
mm9_v1_chr1_-_135804575_135804575	0.451388	HOX{A6,A7,B6,B7}.p2	AK153750|Optc|269120|opticin	NM_001160420|Optc|269120|opticin
mm9_v1_chr3_-_89153857_89153933	0.451186	HOX{A6,A7,B6,B7}.p2	AK151804|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK152725|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK152954|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK152973|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	BC009132|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK020649|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AF006196|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	BC057909|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK170101|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK149796|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK039384|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK142520|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK170365|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK149684|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK048901|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	NM_001037722|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	NM_009614|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)
mm9_v1_chr5_+_121098830_121098830	0.450949	HOX{A6,A7,B6,B7}.p2	BC005418|Rasal1|19415|RAS protein activator like 1 (GAP1 like)	NM_013832|Rasal1|19415|RAS protein activator like 1 (GAP1 like)
mm9_v1_chr11_-_82684245_82684245	0.450381	HOX{A6,A7,B6,B7}.p2	AK128983|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164570|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr4_+_97444494_97444517	0.450368	HOX{A6,A7,B6,B7}.p2	AK052204|Nfia|18027|nuclear factor I/A
mm9_v1_chr14_-_52723590_52723721	0.450327	HOX{A6,A7,B6,B7}.p2	AK214960|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK184811|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	BC095922|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AF095257|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK012633|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	BC004706|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK011336|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK088678|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK169287|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK168802|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK010845|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK150399|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK019958|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK088245|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK151446|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK153053|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK089061|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK166590|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170981|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170982|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170983|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170984|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_016884|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C
mm9_v1_chr7_+_69521858_69521905	0.44954	HOX{A6,A7,B6,B7}.p2	NM_013779|Magel2|27385|melanoma antigen, family L, 2	BC062913|Magel2|27385|melanoma antigen, family L, 2	AK086725|Magel2|27385|melanoma antigen, family L, 2	AK082944|Magel2|27385|melanoma antigen, family L, 2
mm9_v1_chr2_-_125142715_125142753	0.449118	HOX{A6,A7,B6,B7}.p2	AK137018|Fbn1|14118|fibrillin 1
mm9_v1_chr6_-_29330414_29330512	0.448899	HOX{A6,A7,B6,B7}.p2	U49720|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	BC050002|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	BC058267|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	AF190670|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	BC026021|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	NM_007538|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm9_v1_chr3_+_94758056_94758147	0.44747	HOX{A6,A7,B6,B7}.p2	BC051965|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC075717|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	AK088686|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC057336|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)
mm9_v1_chr16_-_57754816_57754849	0.447371	HOX{A6,A7,B6,B7}.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr17_+_34324636_34324691	0.447143	HOX{A6,A7,B6,B7}.p2	AK040629|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	AK040919|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr17_+_17840904_17840904	0.446188	HOX{A6,A7,B6,B7}.p2	NM_001104539|Vmn2r90|626942|vomeronasal 2, receptor 90
mm9_v1_chr4_-_43059017_43059097	0.446037	HOX{A6,A7,B6,B7}.p2	AK161380|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	AK045811|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	NM_172691|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	BC054736|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chr10_+_122115755_122115904	0.444826	HOX{A6,A7,B6,B7}.p2	AK043121|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_001110218|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_176919|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK040207|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK077422|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK134804|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK051434|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK220260|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr15_-_102455489_102455515	0.444084	HOX{A6,A7,B6,B7}.p2	AK047901|Atf7|223922|activating transcription factor 7
mm9_v1_chr2_+_59322709_59322728	0.443539	HOX{A6,A7,B6,B7}.p2	NM_029723|Dapl1|76747|death associated protein-like 1	AK009567|Dapl1|76747|death associated protein-like 1	BC116916|Dapl1|76747|death associated protein-like 1	BC116920|Dapl1|76747|death associated protein-like 1	BC063096|Dapl1|76747|death associated protein-like 1	BC052745|Dapl1|76747|death associated protein-like 1
mm9_v1_chr2_-_25078339_25078347	0.442786	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr4_+_151307819_151307875	0.441805	HOX{A6,A7,B6,B7}.p2	NM_172704|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK089983|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK053156|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK156793|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK171781|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK172542|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC075619|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC085257|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC079852|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11
mm9_v1_chr8_+_55635768_55635781	0.441608	HOX{A6,A7,B6,B7}.p2	BC108405|Asb5|76294|ankyrin repeat and SOCs box-containing 5	AF398966|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr3_+_63885563_63885563	0.44048	HOX{A6,A7,B6,B7}.p2	AB267725|Vmn2r1|56544|vomeronasal 2, receptor 1	AF053986|Vmn2r1|56544|vomeronasal 2, receptor 1	NM_019918|Vmn2r1|56544|vomeronasal 2, receptor 1
mm9_v1_chr19_+_6401701_6401708	0.440421	HOX{A6,A7,B6,B7}.p2	BC051474|Rasgrp2|19395|RAS, guanyl releasing protein 2
mm9_v1_chr14_+_28149221_28149270	0.440321	HOX{A6,A7,B6,B7}.p2	BC005517|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	BC012262|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr8_+_73224288_73224388	0.440103	HOX{A6,A7,B6,B7}.p2	AK131827|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr8_+_4166521_4166600	0.439431	HOX{A6,A7,B6,B7}.p2	AK045240|Evi5l|213027|ecotropic viral integration site 5 like	AK087482|Evi5l|213027|ecotropic viral integration site 5 like	NM_001039578|Evi5l|213027|ecotropic viral integration site 5 like	AK134074|Evi5l|213027|ecotropic viral integration site 5 like	BC042653|Evi5l|213027|ecotropic viral integration site 5 like
mm9_v1_chr18_-_32196584_32196632	0.43939	HOX{A6,A7,B6,B7}.p2	BC138338|Myo7b|17922|myosin VIIB	BC138341|Myo7b|17922|myosin VIIB	NM_032394|Myo7b|17922|myosin VIIB	AF242411|Myo7b|17922|myosin VIIB
mm9_v1_chr3_-_95558736_95558899	0.439121	HOX{A6,A7,B6,B7}.p2	AK187935|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164825|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK088675|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC147501|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK011540|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC008995|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK168075|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK142685|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK080690|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164589|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163617|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163618|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163619|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_027931|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr3_+_132754791_132754924	0.439117	HOX{A6,A7,B6,B7}.p2	AK012829|Ints12|71793|integrator complex subunit 12	AK003874|Ints12|71793|integrator complex subunit 12	AK155162|Ints12|71793|integrator complex subunit 12	AK038713|Ints12|71793|integrator complex subunit 12	BC046996|Ints12|71793|integrator complex subunit 12	BC023801|Ints12|71793|integrator complex subunit 12	NM_027927|Ints12|71793|integrator complex subunit 12
mm9_v1_chr10_+_21714509_21714532	0.43904	HOX{A6,A7,B6,B7}.p2	BC005720|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr9_+_23027995_23028014	0.437892	HOX{A6,A7,B6,B7}.p2	AY263358|Bmper|73230|BMP-binding endothelial regulator	BC066153|Bmper|73230|BMP-binding endothelial regulator
mm9_v1_chr3_+_95733480_95733504	0.436126	HOX{A6,A7,B6,B7}.p2	AB037685|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr15_+_36103768_36103779	0.436009	HOX{A6,A7,B6,B7}.p2	NM_001039368|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	NM_023127|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chr7_+_134913327_134913502	0.435957	HOX{A6,A7,B6,B7}.p2	AK136955|Orai3|269999|ORAI calcium release-activated calcium modulator 3	NM_198424|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AK037138|Orai3|269999|ORAI calcium release-activated calcium modulator 3	BC061259|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AB271216|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AM712358|Orai3|269999|ORAI calcium release-activated calcium modulator 3
mm9_v1_chr5_-_24501570_24501713	0.435583	HOX{A6,A7,B6,B7}.p2	AK032238|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr4_-_88168697_88168697	0.434365	HOX{A6,A7,B6,B7}.p2	BC119395|Ifnb1|15977|interferon beta 1, fibroblast	BC119397|Ifnb1|15977|interferon beta 1, fibroblast	K00020|Ifnb1|15977|interferon beta 1, fibroblast	NM_010510|Ifnb1|15977|interferon beta 1, fibroblast
mm9_v1_chr12_+_85328810_85328840	0.434339	HOX{A6,A7,B6,B7}.p2	NM_134188|Acot2|171210|acyl-CoA thioesterase 2	AK172617|Acot2|171210|acyl-CoA thioesterase 2	AK141651|Acot2|171210|acyl-CoA thioesterase 2	BC064469|Acot2|171210|acyl-CoA thioesterase 2
mm9_v1_chr12_-_105101825_105101829	0.431514	HOX{A6,A7,B6,B7}.p2	NM_009243|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr9_+_50425425_50425450	0.430844	HOX{A6,A7,B6,B7}.p2	NM_028300|Pih1d2|72614|PIH1 domain containing 2	AK080744|Pih1d2|72614|PIH1 domain containing 2	BC039645|Pih1d2|72614|PIH1 domain containing 2	AK012458|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr14_-_55305729_55305777	0.430285	HOX{A6,A7,B6,B7}.p2	AK011698|Acin1|56215|apoptotic chromatin condensation inducer 1	AF168782|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085473|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_023190|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr17_-_37088436_37088450	0.430007	HOX{A6,A7,B6,B7}.p2	EF528576|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr12_-_104895280_104895290	0.4299	HOX{A6,A7,B6,B7}.p2	NM_007618|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6	X70533|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr3_+_137880777_137880845	0.429831	HOX{A6,A7,B6,B7}.p2	AK009588|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AK144795|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	BC047267|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	U20257|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr1_+_153418580_153418669	0.427365	HOX{A6,A7,B6,B7}.p2	AK170193|Fam129a|63913|family with sequence similarity 129, member A	AK136597|Fam129a|63913|family with sequence similarity 129, member A	BC099690|Fam129a|63913|family with sequence similarity 129, member A	BC021332|Fam129a|63913|family with sequence similarity 129, member A	BC069904|Fam129a|63913|family with sequence similarity 129, member A	AB049355|Fam129a|63913|family with sequence similarity 129, member A	BC038006|Fam129a|63913|family with sequence similarity 129, member A
mm9_v1_chr5_-_133018212_133018273	0.426172	HOX{A6,A7,B6,B7}.p2	BC096021|Auts2|319974|autism susceptibility candidate 2	NM_177047|Auts2|319974|autism susceptibility candidate 2	BC151031|Auts2|319974|autism susceptibility candidate 2	BC151047|Auts2|319974|autism susceptibility candidate 2	AK052418|Auts2|319974|autism susceptibility candidate 2
mm9_v1_chr13_-_41454358_41454379	0.425977	HOX{A6,A7,B6,B7}.p2	AK054179|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK033729|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_017464|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr14_+_13116767_13116814	0.425944	HOX{A6,A7,B6,B7}.p2	BC057656|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chrX_+_160811667_160811697	0.424489	HOX{A6,A7,B6,B7}.p2	D89628|Figf|14205|c-fos induced growth factor	BC030037|Figf|14205|c-fos induced growth factor	BC062809|Figf|14205|c-fos induced growth factor
mm9_v1_chr5_-_31999977_32000001	0.423519	HOX{A6,A7,B6,B7}.p2	BC023339|Rbks|71336|ribokinase	NM_153196|Rbks|71336|ribokinase	AK017229|Rbks|71336|ribokinase	AK138939|Rbks|71336|ribokinase
mm9_v1_chr19_+_29064870_29064877	0.423416	HOX{A6,A7,B6,B7}.p2	AK044291|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK048044|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK078139|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr17_-_91492065_91492142	0.42313	HOX{A6,A7,B6,B7}.p2	BC079893|Nrxn1|18189|neurexin I	AK005349|Nrxn1|18189|neurexin I	AK139280|Nrxn1|18189|neurexin I	AK163484|Nrxn1|18189|neurexin I	AK037724|Nrxn1|18189|neurexin I	AB093249|Nrxn1|18189|neurexin I	NM_020252|Nrxn1|18189|neurexin I	NM_177284|Nrxn1|18189|neurexin I	AK137407|Nrxn1|18189|neurexin I
mm9_v1_chr10_-_127984766_127984851	0.421893	HOX{A6,A7,B6,B7}.p2	AK050662|Zc3h10|103284|zinc finger CCCH type containing 10	BC022677|Zc3h10|103284|zinc finger CCCH type containing 10	NM_134003|Zc3h10|103284|zinc finger CCCH type containing 10	AK031312|Zc3h10|103284|zinc finger CCCH type containing 10
mm9_v1_chr3_-_95861723_95861742	0.421162	HOX{A6,A7,B6,B7}.p2	BC012691|Vps45|22365|vacuolar protein sorting 45 (yeast)
mm9_v1_chr17_+_70318530_70318585	0.421018	HOX{A6,A7,B6,B7}.p2	AK147448|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr10_-_127617294_127617366	0.42071	HOX{A6,A7,B6,B7}.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr12_+_60232417_60232447	0.42008	HOX{A6,A7,B6,B7}.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr1_-_84931657_84931708	0.420013	HOX{A6,A7,B6,B7}.p2	BC023456|Slc16a14|71781|solute carrier family 16 (monocarboxylic acid transporters), member 14	NM_027921|Slc16a14|71781|solute carrier family 16 (monocarboxylic acid transporters), member 14	AK049846|Slc16a14|71781|solute carrier family 16 (monocarboxylic acid transporters), member 14
mm9_v1_chr5_+_73039082_73039097	0.419829	HOX{A6,A7,B6,B7}.p2	AK014427|Nipal1|70701|NIPA-like domain containing 1	BC125447|Nipal1|70701|NIPA-like domain containing 1	BC125449|Nipal1|70701|NIPA-like domain containing 1
mm9_v1_chr9_+_66006025_66006053	0.419679	HOX{A6,A7,B6,B7}.p2	NM_010019|Dapk2|13143|death-associated protein kinase 2	AK158082|Dapk2|13143|death-associated protein kinase 2	AB018002|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr9_+_88475873_88475994	0.41893	HOX{A6,A7,B6,B7}.p2	AK145647|Trim43a|547109|tripartite motif-containing 43A	NM_001034906|Trim43a|547109|tripartite motif-containing 43A	AK166678|Trim43a|547109|tripartite motif-containing 43A	BC141236|Trim43a|547109|tripartite motif-containing 43A
mm9_v1_chr7_+_26466176_26466176	0.418088	HOX{A6,A7,B6,B7}.p2	BC028440|B9d2|232987|B9 protein domain 2	NM_172148|B9d2|232987|B9 protein domain 2
mm9_v1_chr6_+_124758692_124758799	0.417764	HOX{A6,A7,B6,B7}.p2	BC002005|Spsb2|14794|splA/ryanodine receptor domain and SOCS box containing 2	AK148177|Spsb2|14794|splA/ryanodine receptor domain and SOCS box containing 2
mm9_v1_chr12_+_8778260_8778451	0.417259	HOX{A6,A7,B6,B7}.p2	AK168091|Sdc1|20969|syndecan 1	AF134897|Sdc1|20969|syndecan 1	AK188181|Sdc1|20969|syndecan 1
mm9_v1_chr8_+_97605076_97605133	0.416261	HOX{A6,A7,B6,B7}.p2	NM_028805|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1	AK054173|Katnb1|74187|katanin p80 (WD40-containing) subunit B 1
mm9_v1_chr1_-_18127131_18127131	0.415446	HOX{A6,A7,B6,B7}.p2	AY705449|Crisp4|78081|cysteine-rich secretory protein 4	NM_030033|Crisp4|78081|cysteine-rich secretory protein 4
mm9_v1_chr4_+_101390472_101390526	0.415056	HOX{A6,A7,B6,B7}.p2	AK155891|Lepr|16847|leptin receptor	U58861|Lepr|16847|leptin receptor	U58862|Lepr|16847|leptin receptor	U58863|Lepr|16847|leptin receptor	AB519175|Lepr|16847|leptin receptor	AB519174|Lepr|16847|leptin receptor	AK140785|Lepr|16847|leptin receptor	U42467|Lepr|16847|leptin receptor	U46135|Lepr|16847|leptin receptor	AB519177|Lepr|16847|leptin receptor	AB519178|Lepr|16847|leptin receptor	AB519176|Lepr|16847|leptin receptor	BC082551|Lepr|16847|leptin receptor
mm9_v1_chr6_+_115084919_115085009	0.414669	HOX{A6,A7,B6,B7}.p2	AF096867|Syn2|20965|synapsin II	NM_001111015|Syn2|20965|synapsin II	NM_013681|Syn2|20965|synapsin II	BC053427|Syn2|20965|synapsin II
mm9_v1_chr11_-_96690784_96690815	0.414587	HOX{A6,A7,B6,B7}.p2	AK154167|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK085935|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130450|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr1_-_174136874_174136913	0.414223	HOX{A6,A7,B6,B7}.p2	NM_011063|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr7_-_97278443_97278523	0.414169	HOX{A6,A7,B6,B7}.p2	AK019082|2310010J17Rik|78329|RIKEN cDNA 2310010J17 gene
mm9_v1_chr1_-_193961641_193961894	0.413995	HOX{A6,A7,B6,B7}.p2	BC138938|Rcor3|214742|REST corepressor 3	BC138939|Rcor3|214742|REST corepressor 3	BC145469|Rcor3|214742|REST corepressor 3	AK203210|Rcor3|214742|REST corepressor 3	BC057141|Rcor3|214742|REST corepressor 3	NM_144814|Rcor3|214742|REST corepressor 3	BC020065|Rcor3|214742|REST corepressor 3	AK135612|Rcor3|214742|REST corepressor 3	AK155440|Rcor3|214742|REST corepressor 3
mm9_v1_chr18_+_42671163_42671217	0.413894	HOX{A6,A7,B6,B7}.p2	AK076993|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AK168434|Tcerg1|56070|transcription elongation regulator 1 (CA150)	AB023485|Tcerg1|56070|transcription elongation regulator 1 (CA150)	BC040284|Tcerg1|56070|transcription elongation regulator 1 (CA150)	BC039185|Tcerg1|56070|transcription elongation regulator 1 (CA150)	BC016542|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr8_-_101940218_101940356	0.413801	HOX{A6,A7,B6,B7}.p2	BC060200|Cdh8|12564|cadherin 8	BC057581|Cdh8|12564|cadherin 8	AK044046|Cdh8|12564|cadherin 8	AK139334|Cdh8|12564|cadherin 8	AK083092|Cdh8|12564|cadherin 8	AK041720|Cdh8|12564|cadherin 8	AK086711|Cdh8|12564|cadherin 8	NM_001039154|Cdh8|12564|cadherin 8	NM_007667|Cdh8|12564|cadherin 8
mm9_v1_chrX_+_35953741_35953908	0.413256	HOX{A6,A7,B6,B7}.p2	AK087975|Mcts1|68995|malignant T cell amplified sequence 1	AK005292|Mcts1|68995|malignant T cell amplified sequence 1	NM_026902|Mcts1|68995|malignant T cell amplified sequence 1	BC010486|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr4_-_34754469_34754554	0.413073	HOX{A6,A7,B6,B7}.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chr1_+_145586675_145586780	0.411828	HOX{A6,A7,B6,B7}.p2	NM_001038592|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_023505|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC065387|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF380337|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132031|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132033|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145303|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145304|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF276918|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr19_-_8787823_8787985	0.411824	HOX{A6,A7,B6,B7}.p2	AK215373|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK156285|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr12_-_119539909_119539930	0.41094	HOX{A6,A7,B6,B7}.p2	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr19_-_8040489_8040530	0.410916	HOX{A6,A7,B6,B7}.p2	AB056443|AB056442|171405|cDNA sequence AB056442	AB056442|AB056442|171405|cDNA sequence AB056442	NM_134256|AB056442|171405|cDNA sequence AB056442
mm9_v1_chr16_+_4639921_4640005	0.410228	HOX{A6,A7,B6,B7}.p2	AK132325|Vasn|246154|vasorin	NM_139307|Vasn|246154|vasorin	AK083684|Vasn|246154|vasorin	AK012169|Vasn|246154|vasorin	BC050274|Vasn|246154|vasorin	AJ458938|Vasn|246154|vasorin
mm9_v1_chr10_+_80644736_80644777	0.410021	HOX{A6,A7,B6,B7}.p2	AK201283|Eef2|13629|eukaryotic translation elongation factor 2	AK189877|Eef2|13629|eukaryotic translation elongation factor 2	AK189936|Eef2|13629|eukaryotic translation elongation factor 2	AK190622|Eef2|13629|eukaryotic translation elongation factor 2	AK190628|Eef2|13629|eukaryotic translation elongation factor 2	AK190763|Eef2|13629|eukaryotic translation elongation factor 2	AK190784|Eef2|13629|eukaryotic translation elongation factor 2	AK190861|Eef2|13629|eukaryotic translation elongation factor 2	AK190927|Eef2|13629|eukaryotic translation elongation factor 2	AK191362|Eef2|13629|eukaryotic translation elongation factor 2	AK191366|Eef2|13629|eukaryotic translation elongation factor 2	AK191562|Eef2|13629|eukaryotic translation elongation factor 2	AK191622|Eef2|13629|eukaryotic translation elongation factor 2	AK191649|Eef2|13629|eukaryotic translation elongation factor 2	AK191693|Eef2|13629|eukaryotic translation elongation factor 2	AK191810|Eef2|13629|eukaryotic translation elongation factor 2	AK191929|Eef2|13629|eukaryotic translation elongation factor 2	AK192150|Eef2|13629|eukaryotic translation elongation factor 2	AK192166|Eef2|13629|eukaryotic translation elongation factor 2	AK192179|Eef2|13629|eukaryotic translation elongation factor 2	AK192372|Eef2|13629|eukaryotic translation elongation factor 2	AK192424|Eef2|13629|eukaryotic translation elongation factor 2	AK192757|Eef2|13629|eukaryotic translation elongation factor 2	AK192765|Eef2|13629|eukaryotic translation elongation factor 2	AK193012|Eef2|13629|eukaryotic translation elongation factor 2	AK193195|Eef2|13629|eukaryotic translation elongation factor 2	AK193267|Eef2|13629|eukaryotic translation elongation factor 2	AK193334|Eef2|13629|eukaryotic translation elongation factor 2	AK193679|Eef2|13629|eukaryotic translation elongation factor 2	AK193887|Eef2|13629|eukaryotic translation elongation factor 2	AK193930|Eef2|13629|eukaryotic translation elongation factor 2	AK193934|Eef2|13629|eukaryotic translation elongation factor 2	AK193935|Eef2|13629|eukaryotic translation elongation factor 2	AK193939|Eef2|13629|eukaryotic translation elongation factor 2	AK194344|Eef2|13629|eukaryotic translation elongation factor 2	AK195004|Eef2|13629|eukaryotic translation elongation factor 2	AK195059|Eef2|13629|eukaryotic translation elongation factor 2	AK195080|Eef2|13629|eukaryotic translation elongation factor 2	AK195098|Eef2|13629|eukaryotic translation elongation factor 2	AK195214|Eef2|13629|eukaryotic translation elongation factor 2	AK195454|Eef2|13629|eukaryotic translation elongation factor 2	AK195506|Eef2|13629|eukaryotic translation elongation factor 2	AK196079|Eef2|13629|eukaryotic translation elongation factor 2	AK196233|Eef2|13629|eukaryotic translation elongation factor 2	AK196287|Eef2|13629|eukaryotic translation elongation factor 2	AK196489|Eef2|13629|eukaryotic translation elongation factor 2	AK196549|Eef2|13629|eukaryotic translation elongation factor 2	AK196556|Eef2|13629|eukaryotic translation elongation factor 2	AK196849|Eef2|13629|eukaryotic translation elongation factor 2	AK196962|Eef2|13629|eukaryotic translation elongation factor 2	AK197222|Eef2|13629|eukaryotic translation elongation factor 2	AK197244|Eef2|13629|eukaryotic translation elongation factor 2	AK197312|Eef2|13629|eukaryotic translation elongation factor 2	AK197319|Eef2|13629|eukaryotic translation elongation factor 2	AK197355|Eef2|13629|eukaryotic translation elongation factor 2	AK197363|Eef2|13629|eukaryotic translation elongation factor 2	AK197549|Eef2|13629|eukaryotic translation elongation factor 2	AK197618|Eef2|13629|eukaryotic translation elongation factor 2	AK197705|Eef2|13629|eukaryotic translation elongation factor 2	AK197848|Eef2|13629|eukaryotic translation elongation factor 2	AK198166|Eef2|13629|eukaryotic translation elongation factor 2	AK198483|Eef2|13629|eukaryotic translation elongation factor 2	AK198569|Eef2|13629|eukaryotic translation elongation factor 2	AK198683|Eef2|13629|eukaryotic translation elongation factor 2	AK198891|Eef2|13629|eukaryotic translation elongation factor 2	AK199179|Eef2|13629|eukaryotic translation elongation factor 2	AK199404|Eef2|13629|eukaryotic translation elongation factor 2	AK199520|Eef2|13629|eukaryotic translation elongation factor 2	AK199588|Eef2|13629|eukaryotic translation elongation factor 2	AK199675|Eef2|13629|eukaryotic translation elongation factor 2	AK199703|Eef2|13629|eukaryotic translation elongation factor 2	AK199709|Eef2|13629|eukaryotic translation elongation factor 2	AK199751|Eef2|13629|eukaryotic translation elongation factor 2	AK199803|Eef2|13629|eukaryotic translation elongation factor 2	AK199810|Eef2|13629|eukaryotic translation elongation factor 2	AK200092|Eef2|13629|eukaryotic translation elongation factor 2	AK200307|Eef2|13629|eukaryotic translation elongation factor 2	AK200465|Eef2|13629|eukaryotic translation elongation factor 2	AK200510|Eef2|13629|eukaryotic translation elongation factor 2	AK200525|Eef2|13629|eukaryotic translation elongation factor 2	AK200843|Eef2|13629|eukaryotic translation elongation factor 2	AK201052|Eef2|13629|eukaryotic translation elongation factor 2	AK201117|Eef2|13629|eukaryotic translation elongation factor 2	AK201643|Eef2|13629|eukaryotic translation elongation factor 2	AK202077|Eef2|13629|eukaryotic translation elongation factor 2	AK202127|Eef2|13629|eukaryotic translation elongation factor 2	AK202201|Eef2|13629|eukaryotic translation elongation factor 2	AK202326|Eef2|13629|eukaryotic translation elongation factor 2	AK202401|Eef2|13629|eukaryotic translation elongation factor 2	AK202472|Eef2|13629|eukaryotic translation elongation factor 2	AK202485|Eef2|13629|eukaryotic translation elongation factor 2	AK202505|Eef2|13629|eukaryotic translation elongation factor 2	AK202849|Eef2|13629|eukaryotic translation elongation factor 2	AK202866|Eef2|13629|eukaryotic translation elongation factor 2	AK203391|Eef2|13629|eukaryotic translation elongation factor 2	AK204582|Eef2|13629|eukaryotic translation elongation factor 2	AK204590|Eef2|13629|eukaryotic translation elongation factor 2	AK204680|Eef2|13629|eukaryotic translation elongation factor 2	AK204768|Eef2|13629|eukaryotic translation elongation factor 2	AK204823|Eef2|13629|eukaryotic translation elongation factor 2	AK207046|Eef2|13629|eukaryotic translation elongation factor 2	AK211931|Eef2|13629|eukaryotic translation elongation factor 2	AK218458|Eef2|13629|eukaryotic translation elongation factor 2	AK192362|Eef2|13629|eukaryotic translation elongation factor 2	AK203693|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr13_+_49748707_49748855	0.408332	HOX{A6,A7,B6,B7}.p2	AK147172|Nol8|70930|nucleolar protein 8	NM_001081350|Nol8|70930|nucleolar protein 8	BC125575|Nol8|70930|nucleolar protein 8	BC125579|Nol8|70930|nucleolar protein 8	AK029961|Nol8|70930|nucleolar protein 8	BC049166|Nol8|70930|nucleolar protein 8
mm9_v1_chr6_-_58974400_58974495	0.408091	HOX{A6,A7,B6,B7}.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr2_+_162813260_162813281	0.408022	HOX{A6,A7,B6,B7}.p2	AK136559|Sgk2|27219|serum/glucocorticoid regulated kinase 2	AF169033|Sgk2|27219|serum/glucocorticoid regulated kinase 2
mm9_v1_chr9_+_21731914_21732108	0.407719	HOX{A6,A7,B6,B7}.p2	AK011114|Ccdc159|67119|coiled-coil domain containing 159	NM_001164614|Ccdc159|67119|coiled-coil domain containing 159	NM_025977|Ccdc159|67119|coiled-coil domain containing 159	BC120702|Ccdc159|67119|coiled-coil domain containing 159	BC120704|Ccdc159|67119|coiled-coil domain containing 159	BC145014|Ccdc159|67119|coiled-coil domain containing 159	AK148448|Ccdc159|67119|coiled-coil domain containing 159	AK042884|Ccdc159|67119|coiled-coil domain containing 159	AK016073|Ccdc159|67119|coiled-coil domain containing 159
mm9_v1_chr11_-_102962905_102962973	0.407661	HOX{A6,A7,B6,B7}.p2	BC031392|Plcd3|72469|phospholipase C, delta 3	AK046669|Plcd3|72469|phospholipase C, delta 3	AK164809|Plcd3|72469|phospholipase C, delta 3	AK166977|Plcd3|72469|phospholipase C, delta 3	NM_152813|Plcd3|72469|phospholipase C, delta 3
mm9_v1_chr13_-_23635220_23635312	0.407547	HOX{A6,A7,B6,B7}.p2	NM_178197|Hist1h2bh|319182|histone cluster 1, H2bh	BC092138|Hist1h2bh|319182|histone cluster 1, H2bh	AK158416|Hist1h2bh|319182|histone cluster 1, H2bh	BC132584|Hist1h2bh|319182|histone cluster 1, H2bh	BC132586|Hist1h2bh|319182|histone cluster 1, H2bh
mm9_v1_chr19_+_54003803_54003809	0.40663	HOX{A6,A7,B6,B7}.p2	AK050175|Pdcd4|18569|programmed cell death 4
mm9_v1_chr11_-_29447830_29448039	0.406614	HOX{A6,A7,B6,B7}.p2	BC002108|Rps27a|78294|ribosomal protein S27A	AK018706|Rps27a|78294|ribosomal protein S27A	NM_001033865|Rps27a|78294|ribosomal protein S27A	NM_024277|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr6_+_86354212_86354404	0.40639	HOX{A6,A7,B6,B7}.p2	NM_001164078|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_001164079|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_011585|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK144222|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK088486|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC023813|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC046812|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC027826|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	U55862|Tia1|21841|cytotoxic granule-associated RNA binding protein 1
mm9_v1_chr4_-_98787525_98787622	0.406264	HOX{A6,A7,B6,B7}.p2	NM_026082|Dock7|67299|dedicator of cytokinesis 7
mm9_v1_chr13_+_113078658_113078796	0.404848	HOX{A6,A7,B6,B7}.p2	AK039553|Ankrd55|77318|ankyrin repeat domain 55	NM_001168403|Ankrd55|77318|ankyrin repeat domain 55	NM_001168405|Ankrd55|77318|ankyrin repeat domain 55	NM_029898|Ankrd55|77318|ankyrin repeat domain 55	AK081197|Ankrd55|77318|ankyrin repeat domain 55	NM_001168404|Ankrd55|77318|ankyrin repeat domain 55	AK140417|Ankrd55|77318|ankyrin repeat domain 55
mm9_v1_chr15_-_75724910_75724923	0.404813	HOX{A6,A7,B6,B7}.p2	AK033661|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1	AY214331|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1	NM_172607|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1
mm9_v1_chr8_-_72974533_72974552	0.403863	HOX{A6,A7,B6,B7}.p2	AK188349|Klhl26|234378|kelch-like 26 (Drosophila)
mm9_v1_chr3_+_68673489_68673528	0.40384	HOX{A6,A7,B6,B7}.p2	NM_001167996|1110032F04Rik|68725|RIKEN cDNA 1110032F04 gene
mm9_v1_chr2_+_22924699_22924786	0.403689	HOX{A6,A7,B6,B7}.p2	BC084584|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr19_+_53217238_53217304	0.403636	HOX{A6,A7,B6,B7}.p2	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr14_+_60884038_60884171	0.402745	HOX{A6,A7,B6,B7}.p2	AK076218|Mtmr6|219135|myotubularin related protein 6	NM_144843|Mtmr6|219135|myotubularin related protein 6	BC020019|Mtmr6|219135|myotubularin related protein 6	AK154859|Mtmr6|219135|myotubularin related protein 6
mm9_v1_chr15_-_33617572_33617639	0.402428	HOX{A6,A7,B6,B7}.p2	AK087510|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	AK173253|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	BC079547|Tspyl5|239364|testis-specific protein, Y-encoded-like 5	NM_001085421|Tspyl5|239364|testis-specific protein, Y-encoded-like 5
mm9_v1_chr10_-_30522716_30522747	0.402318	HOX{A6,A7,B6,B7}.p2	AK144324|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr12_-_104895307_104895340	0.401835	HOX{A6,A7,B6,B7}.p2	AK145842|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr15_+_82176533_82176625	0.401497	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_115885714_115885820	0.399021	HOX{A6,A7,B6,B7}.p2	BC092300|H3f3b|15081|H3 histone, family 3B	X13605|H3f3b|15081|H3 histone, family 3B	BC021768|H3f3b|15081|H3 histone, family 3B	BC092043|H3f3b|15081|H3 histone, family 3B	BC002052|H3f3b|15081|H3 histone, family 3B	AK169620|H3f3b|15081|H3 histone, family 3B	BC037730|H3f3b|15081|H3 histone, family 3B	AK167828|H3f3b|15081|H3 histone, family 3B	AK153239|H3f3b|15081|H3 histone, family 3B	AK159615|H3f3b|15081|H3 histone, family 3B	AK166605|H3f3b|15081|H3 histone, family 3B	AK168931|H3f3b|15081|H3 histone, family 3B	AK169042|H3f3b|15081|H3 histone, family 3B	AK044933|H3f3b|15081|H3 histone, family 3B	AK151451|H3f3b|15081|H3 histone, family 3B	AK153189|H3f3b|15081|H3 histone, family 3B	AK151274|H3f3b|15081|H3 histone, family 3B	AK151336|H3f3b|15081|H3 histone, family 3B	AK152026|H3f3b|15081|H3 histone, family 3B	AK153294|H3f3b|15081|H3 histone, family 3B	AK153371|H3f3b|15081|H3 histone, family 3B	AK159338|H3f3b|15081|H3 histone, family 3B	AK169226|H3f3b|15081|H3 histone, family 3B	AK146070|H3f3b|15081|H3 histone, family 3B	AK151658|H3f3b|15081|H3 histone, family 3B	AK151661|H3f3b|15081|H3 histone, family 3B	AK151869|H3f3b|15081|H3 histone, family 3B	AK152453|H3f3b|15081|H3 histone, family 3B	AK152455|H3f3b|15081|H3 histone, family 3B	AK152911|H3f3b|15081|H3 histone, family 3B	AK161675|H3f3b|15081|H3 histone, family 3B	AK162426|H3f3b|15081|H3 histone, family 3B	AK168698|H3f3b|15081|H3 histone, family 3B	AK169039|H3f3b|15081|H3 histone, family 3B	AK163244|H3f3b|15081|H3 histone, family 3B	AK002928|H3f3b|15081|H3 histone, family 3B	AK011431|H3f3b|15081|H3 histone, family 3B	AK159807|H3f3b|15081|H3 histone, family 3B	AK159850|H3f3b|15081|H3 histone, family 3B	AK135839|H3f3b|15081|H3 histone, family 3B	AK151222|H3f3b|15081|H3 histone, family 3B	AK152623|H3f3b|15081|H3 histone, family 3B	AK153530|H3f3b|15081|H3 histone, family 3B	NM_008211|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr6_-_71773747_71773805	0.39877	HOX{A6,A7,B6,B7}.p2	AK039187|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010369|Mrpl35|66223|mitochondrial ribosomal protein L35	AK012807|Mrpl35|66223|mitochondrial ribosomal protein L35	AK004385|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010223|Mrpl35|66223|mitochondrial ribosomal protein L35	BC028750|Mrpl35|66223|mitochondrial ribosomal protein L35	NM_025430|Mrpl35|66223|mitochondrial ribosomal protein L35
mm9_v1_chr7_+_90015842_90015842	0.397805	HOX{A6,A7,B6,B7}.p2	NM_175366|Mex3b|108797|mex3 homolog B (C. elegans)
mm9_v1_chr3_-_96398053_96398112	0.396863	HOX{A6,A7,B6,B7}.p2	BC027083|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like	AK008069|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like	AK168976|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like	NM_027241|Polr3gl|69870|polymerase (RNA) III (DNA directed) polypeptide G like
mm9_v1_chr14_+_13116681_13116761	0.396666	HOX{A6,A7,B6,B7}.p2	NM_146051|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	NM_178141|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK076182|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC094456|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK089971|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC027421|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr6_-_34267413_34267508	0.396471	HOX{A6,A7,B6,B7}.p2	BC085310|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	D32250|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	L39795|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	BC004725|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	U29152|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK138000|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK028079|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK139250|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK150197|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK164682|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK145392|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	BC021655|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK153949|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK149861|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	NM_009658|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)	AK170663|Akr1b3|11677|aldo-keto reductase family 1, member B3 (aldose reductase)
mm9_v1_chrX_-_98615096_98615252	0.396002	HOX{A6,A7,B6,B7}.p2	BC042699|Zmym3|56364|zinc finger, MYM-type 3	BC050131|Zmym3|56364|zinc finger, MYM-type 3	AK033470|Zmym3|56364|zinc finger, MYM-type 3	BC108366|Zmym3|56364|zinc finger, MYM-type 3	NM_001177985|Zmym3|56364|zinc finger, MYM-type 3	NM_001177986|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr11_-_69509220_69509255	0.395899	HOX{A6,A7,B6,B7}.p2	AF030100|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr8_+_113245378_113245384	0.394779	HOX{A6,A7,B6,B7}.p2	BC060632|Mtss1l|244654|metastasis suppressor 1-like	NM_198625|Mtss1l|244654|metastasis suppressor 1-like
mm9_v1_chr15_+_79177959_79178004	0.394489	HOX{A6,A7,B6,B7}.p2	AK156896|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr17_+_74888823_74888973	0.393992	HOX{A6,A7,B6,B7}.p2	AK166347|Yipf4|67864|Yip1 domain family, member 4	AK009618|Yipf4|67864|Yip1 domain family, member 4	AK083301|Yipf4|67864|Yip1 domain family, member 4	NM_026417|Yipf4|67864|Yip1 domain family, member 4	AK017721|Yipf4|67864|Yip1 domain family, member 4	AK017722|Yipf4|67864|Yip1 domain family, member 4	AK159227|Yipf4|67864|Yip1 domain family, member 4	BC003936|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chrX_-_45866446_45866665	0.393227	HOX{A6,A7,B6,B7}.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr7_+_146434362_146434395	0.391761	HOX{A6,A7,B6,B7}.p2	BC116669|Pwwp2b|101631|PWWP domain containing 2B	NM_001033206|Pwwp2b|101631|PWWP domain containing 2B	NM_001098636|Pwwp2b|101631|PWWP domain containing 2B	AK158245|Pwwp2b|101631|PWWP domain containing 2B	BC116720|Pwwp2b|101631|PWWP domain containing 2B	AK165809|Pwwp2b|101631|PWWP domain containing 2B
mm9_v1_chr9_+_64658817_64658817	0.391425	HOX{A6,A7,B6,B7}.p2	NM_001162917|Dennd4a|102442|DENN/MADD domain containing 4A
mm9_v1_chr15_-_103260834_103260857	0.390983	HOX{A6,A7,B6,B7}.p2	AK005675|Gtsf1|74174|gametocyte specific factor 1	NM_028797|Gtsf1|74174|gametocyte specific factor 1
mm9_v1_chr2_-_58419558_58419636	0.390885	HOX{A6,A7,B6,B7}.p2	L15436|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr2_+_90585526_90585673	0.390172	HOX{A6,A7,B6,B7}.p2	NM_018828|Fnbp4|55935|formin binding protein 4	U40750|Fnbp4|55935|formin binding protein 4
mm9_v1_chr11_-_118900480_118900571	0.39014	HOX{A6,A7,B6,B7}.p2	AK051905|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)
mm9_v1_chr10_+_127669118_127669147	0.389911	HOX{A6,A7,B6,B7}.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr1_-_63260782_63260782	0.389678	HOX{A6,A7,B6,B7}.p2	BC032934|Gpr1|241070|G protein-coupled receptor 1	NM_146250|Gpr1|241070|G protein-coupled receptor 1
mm9_v1_chr5_-_30764170_30764304	0.389263	HOX{A6,A7,B6,B7}.p2	AY586513|Otof|83762|otoferlin	BC145107|Otof|83762|otoferlin	BC145108|Otof|83762|otoferlin	BC150702|Otof|83762|otoferlin	AF183183|Otof|83762|otoferlin	AF183184|Otof|83762|otoferlin	AK147256|Otof|83762|otoferlin	AK147434|Otof|83762|otoferlin	AK046460|Otof|83762|otoferlin	NM_001100395|Otof|83762|otoferlin	NM_031875|Otof|83762|otoferlin
mm9_v1_chr11_-_84338922_84339036	0.388769	HOX{A6,A7,B6,B7}.p2	Z27410|Lhx1|16869|LIM homeobox protein 1	BC092374|Lhx1|16869|LIM homeobox protein 1	NM_008498|Lhx1|16869|LIM homeobox protein 1	AK141086|Lhx1|16869|LIM homeobox protein 1
mm9_v1_chr4_-_58083082_58083145	0.388218	HOX{A6,A7,B6,B7}.p2	AK136952|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr3_+_137880725_137880770	0.388177	HOX{A6,A7,B6,B7}.p2	AK009600|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	NM_009626|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AF331802|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AF331803|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr7_-_126602780_126602785	0.387175	HOX{A6,A7,B6,B7}.p2	BC119573|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009323|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009843|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009661|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	NM_025989|Gp2|67133|glycoprotein 2 (zymogen granule membrane)
mm9_v1_chrX_-_101176600_101176631	0.386906	HOX{A6,A7,B6,B7}.p2	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr10_+_122116022_122116053	0.386572	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_13869955_13869977	0.385114	HOX{A6,A7,B6,B7}.p2	AK075829|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1
mm9_v1_chr16_+_37011839_37011930	0.384679	HOX{A6,A7,B6,B7}.p2	AY074936|Polq|77782|polymerase (DNA directed), theta	AY147862|Polq|77782|polymerase (DNA directed), theta	AY147863|Polq|77782|polymerase (DNA directed), theta	AY147864|Polq|77782|polymerase (DNA directed), theta	NM_001159369|Polq|77782|polymerase (DNA directed), theta	NM_029977|Polq|77782|polymerase (DNA directed), theta	AK020790|Polq|77782|polymerase (DNA directed), theta	BC138360|Polq|77782|polymerase (DNA directed), theta	BC157900|Polq|77782|polymerase (DNA directed), theta
mm9_v1_chr9_-_108469672_108469775	0.38338	HOX{A6,A7,B6,B7}.p2	AF235017|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	NM_023247|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	BC027513|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm9_v1_chr12_+_79849918_79849954	0.383366	HOX{A6,A7,B6,B7}.p2	NM_019579|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr2_+_150735306_150735352	0.382521	HOX{A6,A7,B6,B7}.p2	NM_001163476|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	NM_027014|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	AK013116|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	BC027537|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)
mm9_v1_chr13_+_81850415_81850532	0.382189	HOX{A6,A7,B6,B7}.p2	AK046032|Mblac2|72852|metallo-beta-lactamase domain containing 2	NM_028372|Mblac2|72852|metallo-beta-lactamase domain containing 2	AK013594|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC107207|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC114401|Mblac2|72852|metallo-beta-lactamase domain containing 2	BC107206|Mblac2|72852|metallo-beta-lactamase domain containing 2
mm9_v1_chr4_-_126645129_126645179	0.380696	HOX{A6,A7,B6,B7}.p2	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr10_+_107599100_107599283	0.38064	HOX{A6,A7,B6,B7}.p2	BC125381|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A	BC137630|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm9_v1_chr8_+_89996742_89996746	0.38003	HOX{A6,A7,B6,B7}.p2	AK144513|Gm2694|100040294|predicted gene 2694
mm9_v1_chr16_-_58928469_58928469	0.38	HOX{A6,A7,B6,B7}.p2	NM_146999|Olfr181|259001|olfactory receptor 181
mm9_v1_chr3_+_105707338_105707346	0.379227	HOX{A6,A7,B6,B7}.p2	AK154312|Adora3|11542|adenosine A3 receptor	NM_009631|Adora3|11542|adenosine A3 receptor	AK013534|Adora3|11542|adenosine A3 receptor
mm9_v1_chr14_-_58617936_58618123	0.378827	HOX{A6,A7,B6,B7}.p2	BC031373|Efha1|68514|EF hand domain family A1	AK167296|Efha1|68514|EF hand domain family A1	AK031692|Efha1|68514|EF hand domain family A1	AK049658|Efha1|68514|EF hand domain family A1	BC031172|Efha1|68514|EF hand domain family A1	NM_028643|Efha1|68514|EF hand domain family A1	AK014778|Efha1|68514|EF hand domain family A1
mm9_v1_chr13_-_49748135_49748153	0.378709	HOX{A6,A7,B6,B7}.p2	AK076577|Cenpp|66336|centromere protein P	BC094280|Cenpp|66336|centromere protein P
mm9_v1_chrX_-_99839480_99839617	0.378623	HOX{A6,A7,B6,B7}.p2	X74616|Phka1|18679|phosphorylase kinase alpha 1	AK137497|Phka1|18679|phosphorylase kinase alpha 1	AK036440|Phka1|18679|phosphorylase kinase alpha 1	AK030426|Phka1|18679|phosphorylase kinase alpha 1	NM_008832|Phka1|18679|phosphorylase kinase alpha 1	NM_173021|Phka1|18679|phosphorylase kinase alpha 1
mm9_v1_chr4_-_3761538_3761694	0.378575	HOX{A6,A7,B6,B7}.p2	AK150667|Rps20|67427|ribosomal protein S20
mm9_v1_chr4_+_19745871_19745936	0.377567	HOX{A6,A7,B6,B7}.p2	AK002431|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	AK143768|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	AK128901|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	AK165403|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	NM_028746|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	AB072352|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	BC014684|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	AJ417662|Slc7a13|74087|solute carrier family 7, (cationic amino acid transporter, y+ system) member 13
mm9_v1_chr5_+_91568624_91568640	0.375564	HOX{A6,A7,B6,B7}.p2	AK018590|Areg|11839|amphiregulin	AK020273|Areg|11839|amphiregulin	BC009138|Areg|11839|amphiregulin	NM_009704|Areg|11839|amphiregulin
mm9_v1_chr9_-_56265864_56265938	0.374237	HOX{A6,A7,B6,B7}.p2	AK090133|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene
mm9_v1_chr14_-_35123521_35123584	0.37401	HOX{A6,A7,B6,B7}.p2	AK149442|Fam35a|75698|family with sequence similarity 35, member A	AK081061|Fam35a|75698|family with sequence similarity 35, member A
mm9_v1_chr15_+_81066029_81066052	0.373823	HOX{A6,A7,B6,B7}.p2	AK134867|Mchr1|207911|melanin-concentrating hormone receptor 1
mm9_v1_chr18_-_20218005_20218135	0.373817	HOX{A6,A7,B6,B7}.p2	AK028636|Dsc2|13506|desmocollin 2	AK030333|Dsc2|13506|desmocollin 2	AK048547|Dsc2|13506|desmocollin 2	NM_013505|Dsc2|13506|desmocollin 2	AK028604|Dsc2|13506|desmocollin 2
mm9_v1_chr14_-_56503083_56503107	0.37294	HOX{A6,A7,B6,B7}.p2	BC065108|Cbln3|56410|cerebellin 3 precursor protein	NM_019820|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr11_-_99442304_99442329	0.37289	HOX{A6,A7,B6,B7}.p2	BC147095|Krtap1-5|69664|keratin associated protein 1-5	BC147096|Krtap1-5|69664|keratin associated protein 1-5	AK009782|Krtap1-5|69664|keratin associated protein 1-5	NM_027157|Krtap1-5|69664|keratin associated protein 1-5
mm9_v1_chr11_-_107331865_107332065	0.372535	HOX{A6,A7,B6,B7}.p2	BC082333|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	BC108351|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AB077281|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK153625|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171918|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK172137|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	NM_145823|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171340|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr3_-_10301182_10301182	0.372474	HOX{A6,A7,B6,B7}.p2	BC030910|Fabp12|75497|fatty acid binding protein 12	NM_029310|Fabp12|75497|fatty acid binding protein 12
mm9_v1_chr11_-_101026888_101026952	0.371554	HOX{A6,A7,B6,B7}.p2	BC024538|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr18_+_36687800_36687810	0.371529	HOX{A6,A7,B6,B7}.p2	AK143939|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085424|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK128930|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK142545|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085269|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	NM_172830|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113179|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113785|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm9_v1_chr19_+_56536126_56536129	0.371442	HOX{A6,A7,B6,B7}.p2	NM_001164263|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	NM_172641|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK036908|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK053921|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr2_-_131178551_131178627	0.371237	HOX{A6,A7,B6,B7}.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr1_+_159342882_159342921	0.371037	HOX{A6,A7,B6,B7}.p2	BC055878|2810025M15Rik|69953|RIKEN cDNA 2810025M15 gene	AK012812|2810025M15Rik|69953|RIKEN cDNA 2810025M15 gene
mm9_v1_chr17_-_66235094_66235137	0.370579	HOX{A6,A7,B6,B7}.p2	NM_009067|Ralbp1|19765|ralA binding protein 1	AK138197|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr12_-_28027272_28027439	0.370495	HOX{A6,A7,B6,B7}.p2	AB108675|Sox11|20666|SRY-box containing gene 11	BC062095|Sox11|20666|SRY-box containing gene 11	BC053503|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr6_+_43215604_43215702	0.370226	HOX{A6,A7,B6,B7}.p2	NM_133674|Arhgef5|54324|Rho guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr16_-_23127779_23127814	0.368705	HOX{A6,A7,B6,B7}.p2	AK146954|Rfc4|106344|replication factor C (activator 1) 4	AK147030|Rfc4|106344|replication factor C (activator 1) 4	BC003335|Rfc4|106344|replication factor C (activator 1) 4	NM_145480|Rfc4|106344|replication factor C (activator 1) 4
mm9_v1_chr14_-_26746646_26746735	0.368283	HOX{A6,A7,B6,B7}.p2	AK003554|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK008299|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK002342|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	NM_025311|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed
mm9_v1_chr4_-_114806556_114806590	0.368021	HOX{A6,A7,B6,B7}.p2	AK038526|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1	BC113125|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1	AJ786769|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1	NM_001003947|Cyp4x1|81906|cytochrome P450, family 4, subfamily x, polypeptide 1
mm9_v1_chr7_+_129210684_129210770	0.366935	HOX{A6,A7,B6,B7}.p2	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr3_+_95087357_95087526	0.365832	HOX{A6,A7,B6,B7}.p2	AK179473|Fam63a|75007|family with sequence similarity 63, member A	AK213538|Fam63a|75007|family with sequence similarity 63, member A	AK213681|Fam63a|75007|family with sequence similarity 63, member A	AK215508|Fam63a|75007|family with sequence similarity 63, member A	AK218735|Fam63a|75007|family with sequence similarity 63, member A	AK195238|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr10_-_88067758_88067896	0.365398	HOX{A6,A7,B6,B7}.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr8_+_113557991_113558130	0.365174	HOX{A6,A7,B6,B7}.p2	AK044451|Aars|234734|alanyl-tRNA synthetase
mm9_v1_chr4_-_49857641_49857765	0.363326	HOX{A6,A7,B6,B7}.p2	AK173314|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr2_-_156817751_156817861	0.362296	HOX{A6,A7,B6,B7}.p2	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr3_+_67178016_67178018	0.361766	HOX{A6,A7,B6,B7}.p2	AK007292|Mlf1|17349|myeloid leukemia factor 1	AK133448|Mlf1|17349|myeloid leukemia factor 1	NM_001039543|Mlf1|17349|myeloid leukemia factor 1	NM_010801|Mlf1|17349|myeloid leukemia factor 1
mm9_v1_chr6_-_6167086_6167104	0.360681	HOX{A6,A7,B6,B7}.p2	AK029020|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr10_+_19868725_19868819	0.360344	HOX{A6,A7,B6,B7}.p2	NM_001198635|Mtap7|17761|microtubule-associated protein 7	NM_008635|Mtap7|17761|microtubule-associated protein 7	BC052637|Mtap7|17761|microtubule-associated protein 7	BC042771|Mtap7|17761|microtubule-associated protein 7	BC044733|Mtap7|17761|microtubule-associated protein 7	BC046555|Mtap7|17761|microtubule-associated protein 7	AK008182|Mtap7|17761|microtubule-associated protein 7	AK014575|Mtap7|17761|microtubule-associated protein 7	AB098611|Mtap7|17761|microtubule-associated protein 7	Y15197|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr11_-_50655047_50655053	0.359871	HOX{A6,A7,B6,B7}.p2	BC118537|Zfp879|214779|zinc figer protein 879	AK036152|Zfp879|214779|zinc figer protein 879	NM_173387|Zfp879|214779|zinc figer protein 879
mm9_v1_chr19_-_45857958_45858012	0.359576	HOX{A6,A7,B6,B7}.p2	AK129188|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr11_-_115794529_115794818	0.359122	HOX{A6,A7,B6,B7}.p2	BC066176|Recql5|170472|RecQ protein-like 5	BC053086|Recql5|170472|RecQ protein-like 5	BC060070|Recql5|170472|RecQ protein-like 5	BC059000|Recql5|170472|RecQ protein-like 5	AK029060|Recql5|170472|RecQ protein-like 5	AK083513|Recql5|170472|RecQ protein-like 5
mm9_v1_chr13_-_21384553_21384554	0.358401	HOX{A6,A7,B6,B7}.p2	AK029731|Gpx5|14780|glutathione peroxidase 5	BC100749|Gpx5|14780|glutathione peroxidase 5	BC103588|Gpx5|14780|glutathione peroxidase 5	BC103589|Gpx5|14780|glutathione peroxidase 5	BC105648|Gpx5|14780|glutathione peroxidase 5	NM_010343|Gpx5|14780|glutathione peroxidase 5
mm9_v1_chrX_-_91787338_91787350	0.357276	HOX{A6,A7,B6,B7}.p2	AK220150|Maged1|94275|melanoma antigen, family D, 1	AK132248|Maged1|94275|melanoma antigen, family D, 1
mm9_v1_chr14_+_31814578_31814618	0.356766	HOX{A6,A7,B6,B7}.p2	NM_001165930|Glt8d1|76485|glycosyltransferase 8 domain containing 1	AK077388|Glt8d1|76485|glycosyltransferase 8 domain containing 1	NM_029626|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr5_-_147032490_147032561	0.355868	HOX{A6,A7,B6,B7}.p2	AK017576|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK029912|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK150269|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK152106|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr13_+_21879356_21879395	0.355478	HOX{A6,A7,B6,B7}.p2	AK076671|Hist1h2bp|319188|histone cluster 1, H2bp	BC061044|Hist1h2bp|319188|histone cluster 1, H2bp	NM_178202|Hist1h2bp|319188|histone cluster 1, H2bp	M25487|Hist1h2bp|319188|histone cluster 1, H2bp
mm9_v1_chr1_-_58558259_58558259	0.355443	HOX{A6,A7,B6,B7}.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr18_+_61085303_61085326	0.355346	HOX{A6,A7,B6,B7}.p2	BC031745|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr6_+_17616617_17616660	0.354254	HOX{A6,A7,B6,B7}.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr7_+_13097884_13097899	0.354056	HOX{A6,A7,B6,B7}.p2	AK013837|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC099547|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC087883|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	NM_028434|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene
mm9_v1_chr19_+_9052495_9052648	0.353054	HOX{A6,A7,B6,B7}.p2	AK011087|Eef1g|67160|eukaryotic translation elongation factor 1 gamma
mm9_v1_chr11_-_86539846_86539984	0.352413	HOX{A6,A7,B6,B7}.p2	AK049578|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr11_-_113511366_113511407	0.351919	HOX{A6,A7,B6,B7}.p2	AK165545|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11
mm9_v1_chr12_+_85758140_85758149	0.350214	HOX{A6,A7,B6,B7}.p2	AK009420|Rnf113a2|66381|ring finger protein 113A2	NM_025525|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr2_-_148233681_148233851	0.349951	HOX{A6,A7,B6,B7}.p2	CT010375|Thbd|21824|thrombomodulin	BC019154|Thbd|21824|thrombomodulin	X14432|Thbd|21824|thrombomodulin
mm9_v1_chrX_+_35688564_35688695	0.349665	HOX{A6,A7,B6,B7}.p2	AK004245|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr19_-_45824047_45824092	0.349649	HOX{A6,A7,B6,B7}.p2	AK011749|Npm3|18150|nucleoplasmin 3	NM_008723|Npm3|18150|nucleoplasmin 3	U64450|Npm3|18150|nucleoplasmin 3	AK146603|Npm3|18150|nucleoplasmin 3	AK171848|Npm3|18150|nucleoplasmin 3	AK157198|Npm3|18150|nucleoplasmin 3	BC048491|Npm3|18150|nucleoplasmin 3
mm9_v1_chr17_-_45705198_45705339	0.34942	HOX{A6,A7,B6,B7}.p2	AK192311|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr15_+_81065928_81066000	0.349161	HOX{A6,A7,B6,B7}.p2	NM_145132|Mchr1|207911|melanin-concentrating hormone receptor 1
mm9_v1_chr11_-_70482778_70482812	0.348727	HOX{A6,A7,B6,B7}.p2	BC046751|Spag7|216873|sperm associated antigen 7	BC055821|Spag7|216873|sperm associated antigen 7	AK077543|Spag7|216873|sperm associated antigen 7	AK042294|Spag7|216873|sperm associated antigen 7	AK166184|Spag7|216873|sperm associated antigen 7
mm9_v1_chr4_-_46562128_46562130	0.348465	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_-_35998160_35998229	0.348193	HOX{A6,A7,B6,B7}.p2	BC024607|Rpp40|208366|ribonuclease P 40 subunit (human)	BC037666|Rpp40|208366|ribonuclease P 40 subunit (human)	AK048810|Rpp40|208366|ribonuclease P 40 subunit (human)	NM_145938|Rpp40|208366|ribonuclease P 40 subunit (human)
mm9_v1_chr19_+_10059060_10059150	0.347906	HOX{A6,A7,B6,B7}.p2	AK180886|Fth1|14319|ferritin heavy chain 1
mm9_v1_chr13_+_46513668_46513668	0.347256	HOX{A6,A7,B6,B7}.p2	NM_001081425|Rbm24|666794|RNA binding motif protein 24
mm9_v1_chr17_-_80606526_80606643	0.346269	HOX{A6,A7,B6,B7}.p2	AK182977|Srsf7|225027|serine/arginine-rich splicing factor 7	BC025529|Srsf7|225027|serine/arginine-rich splicing factor 7	BC014857|Srsf7|225027|serine/arginine-rich splicing factor 7	BC027391|Srsf7|225027|serine/arginine-rich splicing factor 7	BC024865|Srsf7|225027|serine/arginine-rich splicing factor 7	AK082848|Srsf7|225027|serine/arginine-rich splicing factor 7	AK161652|Srsf7|225027|serine/arginine-rich splicing factor 7
mm9_v1_chr1_+_173155184_173155238	0.346196	HOX{A6,A7,B6,B7}.p2	NM_013474|Apoa2|11807|apolipoprotein A-II	M79361|Apoa2|11807|apolipoprotein A-II	M79362|Apoa2|11807|apolipoprotein A-II	AK145823|Apoa2|11807|apolipoprotein A-II	X62772|Apoa2|11807|apolipoprotein A-II	BC031786|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr11_+_116455000_116455029	0.345003	HOX{A6,A7,B6,B7}.p2	AF004108|Aanat|11298|arylalkylamine N-acetyltransferase	AF004110|Aanat|11298|arylalkylamine N-acetyltransferase	NM_009591|Aanat|11298|arylalkylamine N-acetyltransferase	BC116967|Aanat|11298|arylalkylamine N-acetyltransferase	BC119139|Aanat|11298|arylalkylamine N-acetyltransferase
mm9_v1_chr7_+_130267661_130267769	0.344292	HOX{A6,A7,B6,B7}.p2	AK147327|Tnrc6a|233833|trinucleotide repeat containing 6a	AK008599|Tnrc6a|233833|trinucleotide repeat containing 6a	BC026849|Tnrc6a|233833|trinucleotide repeat containing 6a	AK083848|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr11_-_69609438_69609445	0.344094	HOX{A6,A7,B6,B7}.p2	NM_009601|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)	BC023318|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr2_+_153035426_153035671	0.342965	HOX{A6,A7,B6,B7}.p2	AK194607|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK208683|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr1_-_182123596_182123618	0.342876	HOX{A6,A7,B6,B7}.p2	AJ278735|Adck3|67426|aarF domain containing kinase 3	NM_001163290|Adck3|67426|aarF domain containing kinase 3
mm9_v1_chr2_-_155949753_155949765	0.342717	HOX{A6,A7,B6,B7}.p2	AK211463|Nfs1|18041|nitrogen fixation gene 1 (S. cerevisiae)
mm9_v1_chr14_-_56254424_56254541	0.342332	HOX{A6,A7,B6,B7}.p2	AK202276|Ipo4|75751|importin 4	AF123388|Ipo4|75751|importin 4	AK018399|Ipo4|75751|importin 4	AK147086|Ipo4|75751|importin 4	AK142138|Ipo4|75751|importin 4	BC075690|Ipo4|75751|importin 4	AK171031|Ipo4|75751|importin 4	NM_024267|Ipo4|75751|importin 4	AK030490|Ipo4|75751|importin 4
mm9_v1_chr14_+_59820284_59820346	0.341762	HOX{A6,A7,B6,B7}.p2	AK017287|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr9_-_99469067_99469110	0.341473	HOX{A6,A7,B6,B7}.p2	AK078280|Armc8|74125|armadillo repeat containing 8	AK083094|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr8_-_13890244_13890296	0.340549	HOX{A6,A7,B6,B7}.p2	BC029192|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK010573|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK008882|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	NM_025556|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene
mm9_v1_chr9_+_122076647_122076688	0.339631	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr18_+_60934249_60934326	0.339332	HOX{A6,A7,B6,B7}.p2	NM_020600|Rps14|20044|ribosomal protein S14	AK028106|Rps14|20044|ribosomal protein S14	AK003148|Rps14|20044|ribosomal protein S14	AK011213|Rps14|20044|ribosomal protein S14	AK012425|Rps14|20044|ribosomal protein S14	AK012584|Rps14|20044|ribosomal protein S14	AK019233|Rps14|20044|ribosomal protein S14	AK146976|Rps14|20044|ribosomal protein S14	AK168237|Rps14|20044|ribosomal protein S14	AK146325|Rps14|20044|ribosomal protein S14	BC042940|Rps14|20044|ribosomal protein S14	BC062874|Rps14|20044|ribosomal protein S14
mm9_v1_chr3_+_59533707_59533707	0.339108	HOX{A6,A7,B6,B7}.p2	NM_001101531|Gm5538|433597|predicted gene 5538
mm9_v1_chr11_-_6171302_6171325	0.338123	HOX{A6,A7,B6,B7}.p2	AK184055|Tmed4|103694|transmembrane emp24 protein transport domain containing 4
mm9_v1_chr10_-_14465464_14465593	0.338055	HOX{A6,A7,B6,B7}.p2	AK209652|Hspa8|15481|heat shock protein 8	AK192102|Hspa8|15481|heat shock protein 8
mm9_v1_chr8_-_73905282_73905372	0.337666	HOX{A6,A7,B6,B7}.p2	L25674|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6	AK171552|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6	X76654|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6
mm9_v1_chr4_-_61179982_61180020	0.336902	HOX{A6,A7,B6,B7}.p2	X04115|Mup1|17840|major urinary protein 1
mm9_v1_chr14_-_46277274_46277306	0.335559	HOX{A6,A7,B6,B7}.p2	AK048690|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr16_+_20672770_20672837	0.3344	HOX{A6,A7,B6,B7}.p2	AK081982|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_001005331|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_145941|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr1_+_43502537_43502605	0.333985	HOX{A6,A7,B6,B7}.p2	AK051665|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	NM_010879|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	AK014949|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chrX_+_109714134_109714134	0.332821	HOX{A6,A7,B6,B7}.p2	AK038956|Zfp711|245595|zinc finger protein 711	NM_177747|Zfp711|245595|zinc finger protein 711
mm9_v1_chr3_+_103379203_103379300	0.332322	HOX{A6,A7,B6,B7}.p2	NM_018800|Syt6|54524|synaptotagmin VI	BC050760|Syt6|54524|synaptotagmin VI	AB026803|Syt6|54524|synaptotagmin VI	AB026809|Syt6|54524|synaptotagmin VI	AB026810|Syt6|54524|synaptotagmin VI
mm9_v1_chr7_+_109082609_109082687	0.332206	HOX{A6,A7,B6,B7}.p2	AK050670|Numa1|101706|nuclear mitotic apparatus protein 1	AK168399|Numa1|101706|nuclear mitotic apparatus protein 1
mm9_v1_chr17_-_35301791_35301808	0.332074	HOX{A6,A7,B6,B7}.p2	BC052630|Prrc2a|53761|proline-rich coiled-coil 2A	BC053522|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr18_+_42671130_42671146	0.331517	HOX{A6,A7,B6,B7}.p2	NM_001039474|Tcerg1|56070|transcription elongation regulator 1 (CA150)
mm9_v1_chr11_-_97914582_97914775	0.331184	HOX{A6,A7,B6,B7}.p2	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr3_+_95697820_95698061	0.329881	HOX{A6,A7,B6,B7}.p2	AK148400|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC057865|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	AK152334|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC012406|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146104|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC024111|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146134|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)
mm9_v1_chr11_+_96055747_96055756	0.329133	HOX{A6,A7,B6,B7}.p2	U57051|Hoxb13|15408|homeobox B13
mm9_v1_chr10_-_92185071_92185164	0.328848	HOX{A6,A7,B6,B7}.p2	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr16_+_34995000_34995001	0.328758	HOX{A6,A7,B6,B7}.p2	BC038902|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr2_+_34627836_34627893	0.328395	HOX{A6,A7,B6,B7}.p2	AJ002387|Hspa5|14828|heat shock protein 5	AK197258|Hspa5|14828|heat shock protein 5	AK215673|Hspa5|14828|heat shock protein 5
mm9_v1_chr15_-_81702298_81702350	0.328032	HOX{A6,A7,B6,B7}.p2	AK163247|Phf5a|68479|PHD finger protein 5A	AK143590|Phf5a|68479|PHD finger protein 5A	NM_026737|Phf5a|68479|PHD finger protein 5A	AK167955|Phf5a|68479|PHD finger protein 5A	BC025161|Phf5a|68479|PHD finger protein 5A	AK003520|Phf5a|68479|PHD finger protein 5A	AF479288|Phf5a|68479|PHD finger protein 5A	AK167932|Phf5a|68479|PHD finger protein 5A
mm9_v1_chr4_+_116381175_116381228	0.327589	HOX{A6,A7,B6,B7}.p2	AK002768|Ccdc163|68394|coiled-coil domain containing 163	AK016995|Ccdc163|68394|coiled-coil domain containing 163
mm9_v1_chr6_+_34426352_34426399	0.327439	HOX{A6,A7,B6,B7}.p2	AK037239|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK078119|Bpgm|12183|2,3-bisphosphoglycerate mutase	NM_007563|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK171685|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK211952|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr5_-_87061409_87061448	0.327344	HOX{A6,A7,B6,B7}.p2	AK029032|Tmprss11f|243083|transmembrane protease, serine 11f	AK028587|Tmprss11f|243083|transmembrane protease, serine 11f	AK028447|Tmprss11f|243083|transmembrane protease, serine 11f	AK036957|Tmprss11f|243083|transmembrane protease, serine 11f	NM_178730|Tmprss11f|243083|transmembrane protease, serine 11f
mm9_v1_chr19_-_44220840_44220957	0.326818	HOX{A6,A7,B6,B7}.p2	BC065806|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	AK010745|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	BC048500|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	AK145313|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	NM_028607|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2
mm9_v1_chr10_+_80599187_80599216	0.326302	HOX{A6,A7,B6,B7}.p2	BC138524|Zbtb7a|16969|zinc finger and BTB domain containing 7a	BC145311|Zbtb7a|16969|zinc finger and BTB domain containing 7a	BC171957|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr11_-_21901563_21901712	0.325637	HOX{A6,A7,B6,B7}.p2	BC057105|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK083671|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK050758|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK083434|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK042975|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK158588|Otx1|18423|orthodenticle homolog 1 (Drosophila)	NM_011023|Otx1|18423|orthodenticle homolog 1 (Drosophila)	AK049430|Otx1|18423|orthodenticle homolog 1 (Drosophila)
mm9_v1_chr3_-_10183884_10183884	0.325486	HOX{A6,A7,B6,B7}.p2	BC099520|Pmp2|18857|peripheral myelin protein 2	NM_001030305|Pmp2|18857|peripheral myelin protein 2
mm9_v1_chr10_-_39862004_39862094	0.324879	HOX{A6,A7,B6,B7}.p2	AK151636|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK036743|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK144135|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK151290|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK151704|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK157355|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK165240|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK165579|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	NM_001114332|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	NM_028247|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK050229|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK011813|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10
mm9_v1_chr3_-_105746659_105746682	0.324754	HOX{A6,A7,B6,B7}.p2	U29530|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr14_-_53110720_53110720	0.324641	HOX{A6,A7,B6,B7}.p2	BC119163|Olfr1507|57269|olfactory receptor 1507	BC119165|Olfr1507|57269|olfactory receptor 1507	NM_020512|Olfr1507|57269|olfactory receptor 1507
mm9_v1_chr16_-_38800293_38800318	0.324474	HOX{A6,A7,B6,B7}.p2	BC046604|Upk1b|22268|uroplakin 1B	AK083101|Upk1b|22268|uroplakin 1B	AK086926|Upk1b|22268|uroplakin 1B	AK053004|Upk1b|22268|uroplakin 1B	NM_178924|Upk1b|22268|uroplakin 1B
mm9_v1_chr17_-_40456121_40456155	0.324394	HOX{A6,A7,B6,B7}.p2	M92849|Crisp1|11571|cysteine-rich secretory protein 1	L05559|Crisp1|11571|cysteine-rich secretory protein 1	BC011150|Crisp1|11571|cysteine-rich secretory protein 1	AK009449|Crisp1|11571|cysteine-rich secretory protein 1	NM_009638|Crisp1|11571|cysteine-rich secretory protein 1
mm9_v1_chr6_-_35083605_35083717	0.323274	HOX{A6,A7,B6,B7}.p2	AK028190|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	BC048243|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	BC058778|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK144760|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK029753|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	U71269|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK009234|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK032248|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr7_+_31348317_31348374	0.322546	HOX{A6,A7,B6,B7}.p2	BC060972|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	NM_170760|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	BC051477|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	AF419339|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4
mm9_v1_chr2_+_162843166_162843193	0.322124	HOX{A6,A7,B6,B7}.p2	AK167194|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)
mm9_v1_chr8_+_28134259_28134401	0.321933	HOX{A6,A7,B6,B7}.p2	BC036333|Erlin2|244373|ER lipid raft associated 2	AK030557|Erlin2|244373|ER lipid raft associated 2	BC038374|Erlin2|244373|ER lipid raft associated 2	NM_153592|Erlin2|244373|ER lipid raft associated 2
mm9_v1_chr15_+_34236408_34236565	0.321188	HOX{A6,A7,B6,B7}.p2	AK035102|Matn2|17181|matrilin 2	NM_016762|Matn2|17181|matrilin 2	AK083151|Matn2|17181|matrilin 2	AK138211|Matn2|17181|matrilin 2	U69262|Matn2|17181|matrilin 2	AK163818|Matn2|17181|matrilin 2	AK081339|Matn2|17181|matrilin 2	BC092298|Matn2|17181|matrilin 2	BC005429|Matn2|17181|matrilin 2
mm9_v1_chr16_+_13265171_13265171	0.321158	HOX{A6,A7,B6,B7}.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr3_-_64311606_64311606	0.320736	HOX{A6,A7,B6,B7}.p2	NM_001104618|Vmn2r5|667060|vomeronasal 2, receptor 5
mm9_v1_chr6_-_35083720_35083747	0.320276	HOX{A6,A7,B6,B7}.p2	AK165997|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK075887|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164411|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164412|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164413|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164414|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_016877|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr17_-_35301810_35301835	0.320017	HOX{A6,A7,B6,B7}.p2	NM_001199044|Prrc2a|53761|proline-rich coiled-coil 2A	NM_020027|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr12_-_86447380_86447380	0.319782	HOX{A6,A7,B6,B7}.p2	AK051700|Prox2|73422|prospero homeobox 2	NM_175198|Prox2|73422|prospero homeobox 2
mm9_v1_chr10_+_13220833_13220918	0.31977	HOX{A6,A7,B6,B7}.p2	AK030320|Fuca2|66848|fucosidase, alpha-L- 2, plasma	NM_025799|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK017443|Fuca2|66848|fucosidase, alpha-L- 2, plasma	BC018181|Fuca2|66848|fucosidase, alpha-L- 2, plasma	BC004039|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK159288|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK163042|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK008653|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK002675|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK146295|Fuca2|66848|fucosidase, alpha-L- 2, plasma	BC094449|Fuca2|66848|fucosidase, alpha-L- 2, plasma
mm9_v1_chr7_+_27092187_27092219	0.319479	HOX{A6,A7,B6,B7}.p2	BC063778|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4	NM_009997|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4	BC010761|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4
mm9_v1_chr7_-_25654709_25654709	0.319014	HOX{A6,A7,B6,B7}.p2	AK077071|Lypd4|232973|Ly6/Plaur domain containing 4	NM_182785|Lypd4|232973|Ly6/Plaur domain containing 4
mm9_v1_chr3_-_87689483_87689550	0.317814	HOX{A6,A7,B6,B7}.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr12_+_112278008_112278010	0.317638	HOX{A6,A7,B6,B7}.p2	NM_198023|Rcor1|217864|REST corepressor 1	BC042731|Rcor1|217864|REST corepressor 1
mm9_v1_chr2_-_48804794_48804803	0.316869	HOX{A6,A7,B6,B7}.p2	AK145454|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr16_-_38445988_38446143	0.316673	HOX{A6,A7,B6,B7}.p2	AK003751|Adprh|11544|ADP-ribosylarginine hydrolase
mm9_v1_chr11_-_69392727_69392825	0.316653	HOX{A6,A7,B6,B7}.p2	AK077570|Wrap53|216853|WD repeat containing, antisense to TP53	AK169271|Wrap53|216853|WD repeat containing, antisense to TP53	AK145219|Wrap53|216853|WD repeat containing, antisense to TP53	BC021790|Wrap53|216853|WD repeat containing, antisense to TP53	NM_144824|Wrap53|216853|WD repeat containing, antisense to TP53
mm9_v1_chr12_+_75385267_75385319	0.315252	HOX{A6,A7,B6,B7}.p2	AK007020|1700086L19Rik|74284|RIKEN cDNA 1700086L19 gene
mm9_v1_chr1_-_74931895_74931992	0.314921	HOX{A6,A7,B6,B7}.p2	BC138435|Fev|260298|FEV (ETS oncogene family)	BC138436|Fev|260298|FEV (ETS oncogene family)	NM_153111|Fev|260298|FEV (ETS oncogene family)	AY049085|Fev|260298|FEV (ETS oncogene family)
mm9_v1_chr4_-_141402189_141402273	0.314317	HOX{A6,A7,B6,B7}.p2	AK007772|Ctrc|76701|chymotrypsin C (caldecrin)	BC103715|Ctrc|76701|chymotrypsin C (caldecrin)	BC115516|Ctrc|76701|chymotrypsin C (caldecrin)	BC115517|Ctrc|76701|chymotrypsin C (caldecrin)	NM_001033875|Ctrc|76701|chymotrypsin C (caldecrin)
mm9_v1_chr18_-_66451420_66451491	0.313584	HOX{A6,A7,B6,B7}.p2	AK039742|Ccbe1|320924|collagen and calcium binding EGF domains 1	BC103803|Ccbe1|320924|collagen and calcium binding EGF domains 1	BC152322|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK220435|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK035153|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK028377|Ccbe1|320924|collagen and calcium binding EGF domains 1	NM_178793|Ccbe1|320924|collagen and calcium binding EGF domains 1
mm9_v1_chr2_-_122011924_122011924	0.312956	HOX{A6,A7,B6,B7}.p2	AK015195|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)	NM_026251|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)
mm9_v1_chr9_-_56265833_56265857	0.312191	HOX{A6,A7,B6,B7}.p2	AK035440|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene	AK048912|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene	NM_172924|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene
mm9_v1_chr19_+_37282150_37282364	0.311388	HOX{A6,A7,B6,B7}.p2	AK007511|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132455|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132457|March5|69104|membrane-associated ring finger (C3HC4) 5	BC064752|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107215|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107214|March5|69104|membrane-associated ring finger (C3HC4) 5
mm9_v1_chr12_-_103213890_103213953	0.31132	HOX{A6,A7,B6,B7}.p2	AK156663|Gm2701|100040305|predicted gene 2701
mm9_v1_chr19_+_12040311_12040373	0.311299	HOX{A6,A7,B6,B7}.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chr3_-_130412360_130412367	0.310909	HOX{A6,A7,B6,B7}.p2	NM_025509|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr9_-_111174074_111174111	0.310648	HOX{A6,A7,B6,B7}.p2	AK038265|Mlh1|17350|mutL homolog 1 (E. coli)	NM_026810|Mlh1|17350|mutL homolog 1 (E. coli)
mm9_v1_chr11_-_30886325_30886386	0.31051	HOX{A6,A7,B6,B7}.p2	AK010914|Chac2|68044|ChaC, cation transport regulator homolog 2 (E. coli)	AK021391|Chac2|68044|ChaC, cation transport regulator homolog 2 (E. coli)	AK078993|Chac2|68044|ChaC, cation transport regulator homolog 2 (E. coli)	NM_026527|Chac2|68044|ChaC, cation transport regulator homolog 2 (E. coli)
mm9_v1_chr1_+_145586478_145586478	0.309309	HOX{A6,A7,B6,B7}.p2	AK005853|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_001038593|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr19_+_5637712_5637737	0.308561	HOX{A6,A7,B6,B7}.p2	BC003818|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr17_-_35653683_35653815	0.308216	HOX{A6,A7,B6,B7}.p2	S53376|Tcf19|106795|transcription factor 19	BC004617|Tcf19|106795|transcription factor 19	AK078697|Tcf19|106795|transcription factor 19	AK088479|Tcf19|106795|transcription factor 19	AK077414|Tcf19|106795|transcription factor 19	NM_001163763|Tcf19|106795|transcription factor 19	NM_001163764|Tcf19|106795|transcription factor 19	NM_025674|Tcf19|106795|transcription factor 19
mm9_v1_chr17_-_71948041_71948067	0.308188	HOX{A6,A7,B6,B7}.p2	AK045842|Trmt61b|68789|tRNA methyltransferase 61 homolog B (S. cerevisiae)
mm9_v1_chr15_+_35301285_35301305	0.308165	HOX{A6,A7,B6,B7}.p2	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr5_-_122822329_122822391	0.307655	HOX{A6,A7,B6,B7}.p2	BC019498|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK005211|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK150218|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr6_-_53018566_53018625	0.307623	HOX{A6,A7,B6,B7}.p2	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr2_-_22895580_22895680	0.307542	HOX{A6,A7,B6,B7}.p2	AY033645|Abi1|11308|abl-interactor 1	AK152061|Abi1|11308|abl-interactor 1	AK152184|Abi1|11308|abl-interactor 1	AK034476|Abi1|11308|abl-interactor 1	BC079642|Abi1|11308|abl-interactor 1	AK151026|Abi1|11308|abl-interactor 1	AK153130|Abi1|11308|abl-interactor 1	AK164040|Abi1|11308|abl-interactor 1
mm9_v1_chr17_-_7165497_7165525	0.307484	HOX{A6,A7,B6,B7}.p2	AF314818|Tagap1|380608|T-cell activation GTPase activating protein 1	BC119550|Tagap1|380608|T-cell activation GTPase activating protein 1	BC119551|Tagap1|380608|T-cell activation GTPase activating protein 1	BC139797|Tagap1|380608|T-cell activation GTPase activating protein 1	NM_147155|Tagap1|380608|T-cell activation GTPase activating protein 1
mm9_v1_chr10_+_79608206_79608223	0.307203	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_69609411_69609422	0.306585	HOX{A6,A7,B6,B7}.p2	AK087554|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr10_+_58834161_58834363	0.306172	HOX{A6,A7,B6,B7}.p2	AK178926|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	AK212609|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm9_v1_chrX_-_48559008_48559019	0.306084	HOX{A6,A7,B6,B7}.p2	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chrX_+_68809163_68809181	0.30595	HOX{A6,A7,B6,B7}.p2	NM_008253|Hmgb3|15354|high mobility group box 3	AK032163|Hmgb3|15354|high mobility group box 3
mm9_v1_chr3_-_144695718_144695741	0.305844	HOX{A6,A7,B6,B7}.p2	BC028343|Clca3|23844|chloride channel calcium activated 3	AB017156|Clca3|23844|chloride channel calcium activated 3	BC116318|Clca3|23844|chloride channel calcium activated 3	BC116319|Clca3|23844|chloride channel calcium activated 3	AK007466|Clca3|23844|chloride channel calcium activated 3	AK008659|Clca3|23844|chloride channel calcium activated 3	AK136476|Clca3|23844|chloride channel calcium activated 3	AK033560|Clca3|23844|chloride channel calcium activated 3	NM_017474|Clca3|23844|chloride channel calcium activated 3
mm9_v1_chr1_+_75233046_75233098	0.305757	HOX{A6,A7,B6,B7}.p2	AK171494|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	AK076061|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr1_-_74982118_74982188	0.304725	HOX{A6,A7,B6,B7}.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr15_-_11835393_11835453	0.303668	HOX{A6,A7,B6,B7}.p2	D78175|Npr3|18162|natriuretic peptide receptor 3	BC055897|Npr3|18162|natriuretic peptide receptor 3	NM_001039181|Npr3|18162|natriuretic peptide receptor 3	NM_008728|Npr3|18162|natriuretic peptide receptor 3
mm9_v1_chr15_+_3976427_3976447	0.302053	HOX{A6,A7,B6,B7}.p2	AK078086|Oxct1|67041|3-oxoacid CoA transferase 1	NM_024188|Oxct1|67041|3-oxoacid CoA transferase 1
mm9_v1_chr14_-_75530687_75530723	0.301931	HOX{A6,A7,B6,B7}.p2	BC145796|Lrrc63|70859|leucine rich repeat containing 63	NM_027581|Lrrc63|70859|leucine rich repeat containing 63
mm9_v1_chr3_+_144260300_144260351	0.301576	HOX{A6,A7,B6,B7}.p2	AK205282|Sep15|93684|selenoprotein	AK213933|Sep15|93684|selenoprotein	AK218207|Sep15|93684|selenoprotein
mm9_v1_chr7_+_87171113_87171302	0.301473	HOX{A6,A7,B6,B7}.p2	NM_175433|Zfp710|209225|zinc finger protein 710	AK155416|Zfp710|209225|zinc finger protein 710	BC060641|Zfp710|209225|zinc finger protein 710	AK083979|Zfp710|209225|zinc finger protein 710	BC058640|Zfp710|209225|zinc finger protein 710
mm9_v1_chr5_+_77380762_77380839	0.301175	HOX{A6,A7,B6,B7}.p2	AK002669|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK079282|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK166264|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK013426|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK075949|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK010462|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	BC018153|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr16_-_88878143_88878282	0.299659	HOX{A6,A7,B6,B7}.p2	AF345296|Krtap16-6|170655|keratin associated protein 16-6	AF345295|Krtap16-5|77918|keratin associated protein 16-5	BC115545|Krtap16-5|77918|keratin associated protein 16-5	BC115546|Krtap16-5|77918|keratin associated protein 16-5	AK020697|Krtap16-5|77918|keratin associated protein 16-5	NM_130857|Krtap16-5|77918|keratin associated protein 16-5
mm9_v1_chr10_-_114821398_114821490	0.299514	HOX{A6,A7,B6,B7}.p2	BC027502|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK051198|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK009162|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK018577|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK081303|Thap2|66816|THAP domain containing, apoptosis associated protein 2	NM_025780|Thap2|66816|THAP domain containing, apoptosis associated protein 2
mm9_v1_chr16_-_92605804_92605880	0.299216	HOX{A6,A7,B6,B7}.p2	AK153274|Runx1|12394|runt related transcription factor 1
mm9_v1_chr1_+_45852310_45852408	0.299144	HOX{A6,A7,B6,B7}.p2	BC085177|Wdr75|73674|WD repeat domain 75	BC117880|Wdr75|73674|WD repeat domain 75	BC117881|Wdr75|73674|WD repeat domain 75	AK010772|Wdr75|73674|WD repeat domain 75	AK152412|Wdr75|73674|WD repeat domain 75	AK168163|Wdr75|73674|WD repeat domain 75	NM_028599|Wdr75|73674|WD repeat domain 75	AK169932|Wdr75|73674|WD repeat domain 75	AK168032|Wdr75|73674|WD repeat domain 75	AK163221|Wdr75|73674|WD repeat domain 75	AK199189|Wdr75|73674|WD repeat domain 75	AK207424|Wdr75|73674|WD repeat domain 75
mm9_v1_chr19_+_5493612_5493771	0.29909	HOX{A6,A7,B6,B7}.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr16_-_38712939_38713011	0.298928	HOX{A6,A7,B6,B7}.p2	BC138870|Arhgap31|12549|Rho GTPase activating protein 31	AK170685|Arhgap31|12549|Rho GTPase activating protein 31	AK155729|Arhgap31|12549|Rho GTPase activating protein 31	AK149975|Arhgap31|12549|Rho GTPase activating protein 31	AK150109|Arhgap31|12549|Rho GTPase activating protein 31	AK045213|Arhgap31|12549|Rho GTPase activating protein 31	AK018057|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr14_+_53070067_53070067	0.298484	HOX{A6,A7,B6,B7}.p2	BC119195|Olfr1509|57271|olfactory receptor 1509	BC119199|Olfr1509|57271|olfactory receptor 1509	NM_020514|Olfr1509|57271|olfactory receptor 1509
mm9_v1_chr19_-_6235784_6235886	0.298313	HOX{A6,A7,B6,B7}.p2	AK171041|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK155872|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK171178|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	NM_198168|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK034167|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform	AK171430|Ppp2r5b|225849|protein phosphatase 2, regulatory subunit B (B56), beta isoform
mm9_v1_chr1_-_183141500_183141531	0.297545	HOX{A6,A7,B6,B7}.p2	AK075743|Wdr26|226757|WD repeat domain 26
mm9_v1_chr13_-_23790310_23790328	0.295719	HOX{A6,A7,B6,B7}.p2	BC115451|Hist1h4c|319155|histone cluster 1, H4c	BC115450|Hist1h4c|319155|histone cluster 1, H4c	BC139809|Hist1h4c|319155|histone cluster 1, H4c	NM_178208|Hist1h4c|319155|histone cluster 1, H4c
mm9_v1_chr6_-_146583036_146583144	0.295155	HOX{A6,A7,B6,B7}.p2	BC023389|Tm7sf3|67623|transmembrane 7 superfamily member 3	DQ104329|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK171111|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK154633|Tm7sf3|67623|transmembrane 7 superfamily member 3	NM_026281|Tm7sf3|67623|transmembrane 7 superfamily member 3
mm9_v1_chr1_-_130224894_130224894	0.294371	HOX{A6,A7,B6,B7}.p2	NM_001081078|Lct|226413|lactase
mm9_v1_chr4_-_22415277_22415277	0.293944	HOX{A6,A7,B6,B7}.p2	NM_008899|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr5_+_138082700_138082700	0.293649	HOX{A6,A7,B6,B7}.p2	AM275337|Sap25|751865|sin3 associated polypeptide	NM_001081962|Sap25|751865|sin3 associated polypeptide
mm9_v1_chr1_-_94076857_94076917	0.292824	HOX{A6,A7,B6,B7}.p2	AK155250|Hdac4|208727|histone deacetylase 4
mm9_v1_chr11_-_89864036_89864209	0.292662	HOX{A6,A7,B6,B7}.p2	Z50024|Pctp|18559|phosphatidylcholine transfer protein	BC053478|Pctp|18559|phosphatidylcholine transfer protein	BC071234|Pctp|18559|phosphatidylcholine transfer protein	AF151639|Pctp|18559|phosphatidylcholine transfer protein	NM_008796|Pctp|18559|phosphatidylcholine transfer protein
mm9_v1_chr11_+_20991293_20991320	0.292434	HOX{A6,A7,B6,B7}.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr10_+_127669154_127669189	0.291916	HOX{A6,A7,B6,B7}.p2	BC058641|Timeless|21853|timeless homolog (Drosophila)	BC082770|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr16_-_10395401_10395557	0.291338	HOX{A6,A7,B6,B7}.p2	AK014352|Tekt5|70426|tektin 5	BC115969|Tekt5|70426|tektin 5	NM_001099275|Tekt5|70426|tektin 5	GQ292766|Tekt5|70426|tektin 5
mm9_v1_chrY_+_347036_347061	0.291073	HOX{A6,A7,B6,B7}.p2	AK012186|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK153974|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK009448|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AJ006584|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC043656|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	NM_012011|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC031450|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm9_v1_chr6_+_11875912_11875926	0.290782	HOX{A6,A7,B6,B7}.p2	BC040236|Phf14|75725|PHD finger protein 14
mm9_v1_chr14_-_52816830_52816940	0.290209	HOX{A6,A7,B6,B7}.p2	AK158116|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)	AK148506|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)	AF323667|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)	AK146529|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)	NM_033618|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)	AK169561|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)
mm9_v1_chr3_+_88425073_88425232	0.289973	HOX{A6,A7,B6,B7}.p2	BC006589|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AB093254|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr11_+_106078232_106078424	0.289536	HOX{A6,A7,B6,B7}.p2	AK049311|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_028074|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK169816|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK021013|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK171730|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK134182|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm9_v1_chr19_+_46576137_46576194	0.289362	HOX{A6,A7,B6,B7}.p2	NM_053100|Trim8|93679|tripartite motif-containing 8	AK155303|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr11_+_120466611_120466690	0.289163	HOX{A6,A7,B6,B7}.p2	AK003684|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr4_+_155384263_155384331	0.289027	HOX{A6,A7,B6,B7}.p2	AK087335|Sdf4|20318|stromal cell derived factor 4
mm9_v1_chr17_-_42829185_42829232	0.288818	HOX{A6,A7,B6,B7}.p2	BC140980|Gpr115|78249|G protein-coupled receptor 115	AK019508|Gpr115|78249|G protein-coupled receptor 115	BC089564|Gpr115|78249|G protein-coupled receptor 115	NM_030067|Gpr115|78249|G protein-coupled receptor 115
mm9_v1_chrX_+_7305654_7305720	0.288745	HOX{A6,A7,B6,B7}.p2	BC064757|Praf2|54637|PRA1 domain family 2	AK003344|Praf2|54637|PRA1 domain family 2	AK224918|Praf2|54637|PRA1 domain family 2	NM_138602|Praf2|54637|PRA1 domain family 2	AF229636|Praf2|54637|PRA1 domain family 2
mm9_v1_chr19_+_46130978_46131205	0.288702	HOX{A6,A7,B6,B7}.p2	NM_001081214|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK147947|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK044522|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK122322|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	BC066048|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK180476|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm9_v1_chr18_+_37571327_37571327	0.288235	HOX{A6,A7,B6,B7}.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chrX_+_35548300_35548338	0.288211	HOX{A6,A7,B6,B7}.p2	AK080301|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr11_-_100355280_100355392	0.287635	HOX{A6,A7,B6,B7}.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr14_-_46277772_46277802	0.287605	HOX{A6,A7,B6,B7}.p2	AK155294|Ddhd1|114874|DDHD domain containing 1	AK170271|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr9_-_110556645_110556664	0.287254	HOX{A6,A7,B6,B7}.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr15_-_63829523_63829656	0.286858	HOX{A6,A7,B6,B7}.p2	BC011343|Fam49b|223601|family with sequence similarity 49, member B
mm9_v1_chr19_-_38199737_38199810	0.286622	HOX{A6,A7,B6,B7}.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr6_-_148894953_148895000	0.285522	HOX{A6,A7,B6,B7}.p2	BC076599|Fam60a|56306|family with sequence similarity 60, member A	NM_019643|Fam60a|56306|family with sequence similarity 60, member A	AK166569|Fam60a|56306|family with sequence similarity 60, member A	AK145384|Fam60a|56306|family with sequence similarity 60, member A
mm9_v1_chr14_+_65569108_65569182	0.285355	HOX{A6,A7,B6,B7}.p2	AK035769|Ints9|210925|integrator complex subunit 9	AK038979|Ints9|210925|integrator complex subunit 9	AK136992|Ints9|210925|integrator complex subunit 9	AK150195|Ints9|210925|integrator complex subunit 9	BC055700|Ints9|210925|integrator complex subunit 9
mm9_v1_chr7_-_125273061_125273141	0.28485	HOX{A6,A7,B6,B7}.p2	BC046792|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF133669|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF223953|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	BC010196|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152885|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK090001|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150042|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151272|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152565|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK163655|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167912|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168245|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK169191|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154644|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167872|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168172|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154355|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF172088|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167888|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	NM_019419|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr13_-_74460431_74460546	0.284648	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr13_+_78337168_78337277	0.284183	HOX{A6,A7,B6,B7}.p2	AK082108|A830082K12Rik|320174|RIKEN cDNA A830082K12 gene
mm9_v1_chr7_-_105805050_105805106	0.284174	HOX{A6,A7,B6,B7}.p2	BC066050|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC039956|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC089304|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	NM_172280|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	AK032985|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene
mm9_v1_chr19_+_30078279_30078291	0.28389	HOX{A6,A7,B6,B7}.p2	AK016450|Trpd52l3|66745|tumor protein D52-like 3	BC125314|Trpd52l3|66745|tumor protein D52-like 3	BC125316|Trpd52l3|66745|tumor protein D52-like 3	NM_025741|Trpd52l3|66745|tumor protein D52-like 3	AK016362|Trpd52l3|66745|tumor protein D52-like 3
mm9_v1_chr19_+_59532861_59532927	0.283602	HOX{A6,A7,B6,B7}.p2	AY117415|Emx2|13797|empty spiracles homolog 2 (Drosophila)
mm9_v1_chr12_+_111685516_111685575	0.282443	HOX{A6,A7,B6,B7}.p2	AK129042|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK161855|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr18_+_21230844_21230846	0.281918	HOX{A6,A7,B6,B7}.p2	AK098127|Mep1b|17288|meprin 1 beta	L15193|Mep1b|17288|meprin 1 beta	NM_008586|Mep1b|17288|meprin 1 beta	BC145979|Mep1b|17288|meprin 1 beta	BC125627|Mep1b|17288|meprin 1 beta
mm9_v1_chr11_-_113612473_113612473	0.281738	HOX{A6,A7,B6,B7}.p2	NM_020006|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr15_-_81021069_81021163	0.280461	HOX{A6,A7,B6,B7}.p2	AF532597|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	BC050941|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	BC054801|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	AK154561|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm9_v1_chr3_-_89206571_89206714	0.280335	HOX{A6,A7,B6,B7}.p2	NM_020517|Lenep|57275|lens epithelial protein	AK053703|Lenep|57275|lens epithelial protein	BC006806|Lenep|57275|lens epithelial protein
mm9_v1_chr2_-_91516101_91516113	0.279798	HOX{A6,A7,B6,B7}.p2	BC024457|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr9_-_44728790_44728826	0.278626	HOX{A6,A7,B6,B7}.p2	AK011099|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019320|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008036|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008169|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC089555|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005380|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	NM_013795|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr7_+_22880538_22880538	0.278605	HOX{A6,A7,B6,B7}.p2	NM_001122682|Vmn1r132|100043604|vomeronasal 1 receptor 132
mm9_v1_chr17_-_20185168_20185168	0.278046	HOX{A6,A7,B6,B7}.p2	NM_001104566|Vmn2r104|22313|vomeronasal 2, receptor 104
mm9_v1_chr7_+_109054350_109054514	0.27771	HOX{A6,A7,B6,B7}.p2	NM_025605|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK010247|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK013389|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC126973|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK144476|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC020142|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK003509|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC092062|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK009320|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC096412|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK019947|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK203171|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene
mm9_v1_chr2_-_91790504_91790533	0.277402	HOX{A6,A7,B6,B7}.p2	AK087503|Dgkz|104418|diacylglycerol kinase zeta	NM_001166597|Dgkz|104418|diacylglycerol kinase zeta
mm9_v1_chr7_+_108570359_108570423	0.27711	HOX{A6,A7,B6,B7}.p2	BC057029|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK159012|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr2_+_172376490_172376538	0.27682	HOX{A6,A7,B6,B7}.p2	NM_001159696|Tcfap2c|21420|transcription factor AP-2, gamma	AK145603|Tcfap2c|21420|transcription factor AP-2, gamma
mm9_v1_chr11_-_72990492_72990557	0.276643	HOX{A6,A7,B6,B7}.p2	NM_001168470|Tmem93|66048|transmembrane protein 93	BC022104|Tmem93|66048|transmembrane protein 93	AK002385|Tmem93|66048|transmembrane protein 93	AK012769|Tmem93|66048|transmembrane protein 93	AK003198|Tmem93|66048|transmembrane protein 93	AK004149|Tmem93|66048|transmembrane protein 93	NM_025318|Tmem93|66048|transmembrane protein 93
mm9_v1_chr1_-_132611151_132611152	0.276402	HOX{A6,A7,B6,B7}.p2	EU334169|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616666|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616667|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616668|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616669|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616670|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_001162416|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr4_+_111392586_111392619	0.27558	HOX{A6,A7,B6,B7}.p2	AK051574|Spata6|67946|spermatogenesis associated 6	NM_026470|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr8_+_24145593_24145599	0.275495	HOX{A6,A7,B6,B7}.p2	M84756|Ank1|11733|ankyrin 1, erythroid	BC079910|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr2_-_140215417_140215459	0.275463	HOX{A6,A7,B6,B7}.p2	BC150948|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK131753|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK132650|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_001033296|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK016809|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)
mm9_v1_chr5_-_102498929_102498975	0.274255	HOX{A6,A7,B6,B7}.p2	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr4_+_45355039_45355115	0.274167	HOX{A6,A7,B6,B7}.p2	AK157345|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK045241|Dcaf10|242418|DDB1 and CUL4 associated factor 10	BC085101|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr11_-_70501430_70501474	0.273764	HOX{A6,A7,B6,B7}.p2	AK039670|Camta2|216874|calmodulin binding transcription activator 2	BC049133|Camta2|216874|calmodulin binding transcription activator 2	BC056395|Camta2|216874|calmodulin binding transcription activator 2	AK169118|Camta2|216874|calmodulin binding transcription activator 2	AK150186|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr1_-_72920776_72921027	0.273472	HOX{A6,A7,B6,B7}.p2	X81583|Igfbp5|16011|insulin-like growth factor binding protein 5	BC054812|Igfbp5|16011|insulin-like growth factor binding protein 5	BC026805|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr9_+_95459990_95460369	0.273379	HOX{A6,A7,B6,B7}.p2	AY424298|Paqr9|75552|progestin and adipoQ receptor family member IX	NM_198414|Paqr9|75552|progestin and adipoQ receptor family member IX	AK133021|Paqr9|75552|progestin and adipoQ receptor family member IX
mm9_v1_chr7_-_110926856_110926856	0.273058	HOX{A6,A7,B6,B7}.p2	NM_013620|Olfr68|18369|olfactory receptor 68
mm9_v1_chr1_-_141755209_141755302	0.272779	HOX{A6,A7,B6,B7}.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr11_+_87551028_87551046	0.272497	HOX{A6,A7,B6,B7}.p2	BC141092|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)
mm9_v1_chr3_+_103718042_103718073	0.272364	HOX{A6,A7,B6,B7}.p2	AB101658|Rsbn1|229675|rosbin, round spermatid basic protein 1	NM_172684|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139213|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139215|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr12_+_74224693_74224793	0.272353	HOX{A6,A7,B6,B7}.p2	AK048499|Mnat1|17420|menage a trois 1	AK155859|Mnat1|17420|menage a trois 1	NM_008612|Mnat1|17420|menage a trois 1	AK008249|Mnat1|17420|menage a trois 1	BC089023|Mnat1|17420|menage a trois 1	BC115630|Mnat1|17420|menage a trois 1	BC115631|Mnat1|17420|menage a trois 1	AK157721|Mnat1|17420|menage a trois 1	AK008134|Mnat1|17420|menage a trois 1	AK053621|Mnat1|17420|menage a trois 1	AK011833|Mnat1|17420|menage a trois 1	AK029174|Mnat1|17420|menage a trois 1
mm9_v1_chr12_-_105101768_105101807	0.270998	HOX{A6,A7,B6,B7}.p2	BC057984|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr3_-_95622554_95622875	0.270013	HOX{A6,A7,B6,B7}.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chr6_-_35459327_35459385	0.269999	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_14264800_14264841	0.269894	HOX{A6,A7,B6,B7}.p2	AB183545|Gpr126|215798|G protein-coupled receptor 126	NM_001002268|Gpr126|215798|G protein-coupled receptor 126
mm9_v1_chr11_-_4999069_4999098	0.269675	HOX{A6,A7,B6,B7}.p2	AK049743|Ewsr1|14030|Ewing sarcoma breakpoint region 1	NM_007968|Ewsr1|14030|Ewing sarcoma breakpoint region 1	X79233|Ewsr1|14030|Ewing sarcoma breakpoint region 1	AK046434|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr1_+_174048400_174048426	0.269491	HOX{A6,A7,B6,B7}.p2	BC005609|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr1_-_145454821_145454855	0.269117	HOX{A6,A7,B6,B7}.p2	AK029710|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_-_174264400_174264522	0.26901	HOX{A6,A7,B6,B7}.p2	AK008370|Ctsz|64138|cathepsin Z	AF197479|Ctsz|64138|cathepsin Z	AK150329|Ctsz|64138|cathepsin Z	AK150894|Ctsz|64138|cathepsin Z	AK153147|Ctsz|64138|cathepsin Z	AK159826|Ctsz|64138|cathepsin Z	AK151440|Ctsz|64138|cathepsin Z	AK159118|Ctsz|64138|cathepsin Z	AK002710|Ctsz|64138|cathepsin Z	AK151585|Ctsz|64138|cathepsin Z	AK151994|Ctsz|64138|cathepsin Z	AK160001|Ctsz|64138|cathepsin Z	AK160028|Ctsz|64138|cathepsin Z	AK166047|Ctsz|64138|cathepsin Z	AK170963|Ctsz|64138|cathepsin Z	AK150947|Ctsz|64138|cathepsin Z	AK010912|Ctsz|64138|cathepsin Z	AK004095|Ctsz|64138|cathepsin Z	BC008619|Ctsz|64138|cathepsin Z	NM_022325|Ctsz|64138|cathepsin Z	AJ242663|Ctsz|64138|cathepsin Z	AF136277|Ctsz|64138|cathepsin Z	AK159618|Ctsz|64138|cathepsin Z	AK160354|Ctsz|64138|cathepsin Z
mm9_v1_chr11_-_98054573_98054589	0.26892	HOX{A6,A7,B6,B7}.p2	BC021440|Med1|19014|mediator complex subunit 1	BC079636|Med1|19014|mediator complex subunit 1	AK147199|Med1|19014|mediator complex subunit 1	AK005207|Med1|19014|mediator complex subunit 1
mm9_v1_chr9_-_30729990_30730036	0.267132	HOX{A6,A7,B6,B7}.p2	BC094677|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15	NM_001024139|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm9_v1_chr7_-_123586952_123586976	0.26688	HOX{A6,A7,B6,B7}.p2	AK163446|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK049609|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	U52193|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK019194|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK140908|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	NM_011083|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr15_+_35301320_35301357	0.266233	HOX{A6,A7,B6,B7}.p2	BC158052|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr9_+_51856364_51856507	0.265689	HOX{A6,A7,B6,B7}.p2	BC053417|Rdx|19684|radixin	BC026786|Rdx|19684|radixin	AK016711|Rdx|19684|radixin	AK168449|Rdx|19684|radixin	AK146423|Rdx|19684|radixin	BC002041|Rdx|19684|radixin	X60672|Rdx|19684|radixin
mm9_v1_chr14_+_54980488_54980535	0.264782	HOX{A6,A7,B6,B7}.p2	AK139484|Oxa1l|69089|oxidase assembly 1-like	AK154304|Oxa1l|69089|oxidase assembly 1-like	AK007567|Oxa1l|69089|oxidase assembly 1-like	AK087756|Oxa1l|69089|oxidase assembly 1-like	AK028379|Oxa1l|69089|oxidase assembly 1-like	AK052432|Oxa1l|69089|oxidase assembly 1-like	AK077624|Oxa1l|69089|oxidase assembly 1-like	AK154532|Oxa1l|69089|oxidase assembly 1-like	AK163101|Oxa1l|69089|oxidase assembly 1-like	AK170898|Oxa1l|69089|oxidase assembly 1-like	NM_026936|Oxa1l|69089|oxidase assembly 1-like	AK044817|Oxa1l|69089|oxidase assembly 1-like	BC027191|Oxa1l|69089|oxidase assembly 1-like
mm9_v1_chr11_-_3333979_3333985	0.264663	HOX{A6,A7,B6,B7}.p2	AK165895|Rnf185|193670|ring finger protein 185
mm9_v1_chr2_+_172266042_172266209	0.263925	HOX{A6,A7,B6,B7}.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr5_-_77543903_77543908	0.263164	HOX{A6,A7,B6,B7}.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr5_-_144775583_144775788	0.26303	HOX{A6,A7,B6,B7}.p2	AK213761|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC048077|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_177682|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK090008|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK171671|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK172392|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK146704|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK150793|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152328|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152576|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK153160|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK164888|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
mm9_v1_chr5_-_99466008_99466097	0.26285	HOX{A6,A7,B6,B7}.p2	BC113205|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK038739|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK081422|Prkg2|19092|protein kinase, cGMP-dependent, type II	NM_008926|Prkg2|19092|protein kinase, cGMP-dependent, type II
mm9_v1_chr3_-_89017811_89017848	0.262756	HOX{A6,A7,B6,B7}.p2	AK163982|Mtx1|17827|metaxin 1	AK165547|Mtx1|17827|metaxin 1	L36962|Mtx1|17827|metaxin 1	BC023071|Mtx1|17827|metaxin 1	AK159316|Mtx1|17827|metaxin 1	AK165923|Mtx1|17827|metaxin 1	L10897|Mtx1|17827|metaxin 1	AK086135|Mtx1|17827|metaxin 1
mm9_v1_chr7_+_52669049_52669064	0.262731	HOX{A6,A7,B6,B7}.p2	BC052191|Ntf5|78405|neurotrophin 5	NM_198190|Ntf5|78405|neurotrophin 5
mm9_v1_chr18_+_83084023_83084023	0.262156	HOX{A6,A7,B6,B7}.p2	NM_001177464|Zfp516|329003|zinc finger protein 516
mm9_v1_chr7_-_111001598_111001720	0.262119	HOX{A6,A7,B6,B7}.p2	V00857|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	M26897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	BC057014|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK011619|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012501|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	NM_008221|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain
mm9_v1_chr18_+_50438022_50438024	0.26207	HOX{A6,A7,B6,B7}.p2	AY692448|Fam170a|225497|family with sequence similarity 170, member A	AY692449|Fam170a|225497|family with sequence similarity 170, member A	NM_001004061|Fam170a|225497|family with sequence similarity 170, member A	BC147592|Fam170a|225497|family with sequence similarity 170, member A	BC147595|Fam170a|225497|family with sequence similarity 170, member A	BC172108|Fam170a|225497|family with sequence similarity 170, member A	BC172111|Fam170a|225497|family with sequence similarity 170, member A	BC172113|Fam170a|225497|family with sequence similarity 170, member A
mm9_v1_chr10_-_80841099_80841253	0.261997	HOX{A6,A7,B6,B7}.p2	AF083809|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	NM_019757|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK081476|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK163951|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK083686|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK155370|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK051993|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	BC006616|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK154822|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK172679|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)
mm9_v1_chr17_-_65944300_65944335	0.261986	HOX{A6,A7,B6,B7}.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr4_-_70071302_70071482	0.261797	HOX{A6,A7,B6,B7}.p2	BC086696|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK013550|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK129411|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	NM_145990|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	BC079888|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2
mm9_v1_chr9_-_100446544_100446556	0.261657	HOX{A6,A7,B6,B7}.p2	AF043259|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr17_+_35118792_35118874	0.261565	HOX{A6,A7,B6,B7}.p2	NM_001110101|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK162880|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC014288|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK151605|Lsm2|27756|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr1_-_38954933_38955026	0.2615	HOX{A6,A7,B6,B7}.p2	BC056956|Chst10|98388|carbohydrate sulfotransferase 10	AK047378|Chst10|98388|carbohydrate sulfotransferase 10	NM_145142|Chst10|98388|carbohydrate sulfotransferase 10	AK050676|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chrX_+_103382432_103382595	0.260722	HOX{A6,A7,B6,B7}.p2	NM_008828|Pgk1|18655|phosphoglycerate kinase 1	AK145846|Pgk1|18655|phosphoglycerate kinase 1	AK133877|Pgk1|18655|phosphoglycerate kinase 1	AK164440|Pgk1|18655|phosphoglycerate kinase 1	BC108372|Pgk1|18655|phosphoglycerate kinase 1	BC023819|Pgk1|18655|phosphoglycerate kinase 1	BC032167|Pgk1|18655|phosphoglycerate kinase 1	AK167441|Pgk1|18655|phosphoglycerate kinase 1	AK167459|Pgk1|18655|phosphoglycerate kinase 1	AK167710|Pgk1|18655|phosphoglycerate kinase 1	BC083355|Pgk1|18655|phosphoglycerate kinase 1	M15668|Pgk1|18655|phosphoglycerate kinase 1	EF437325|Pgk1|18655|phosphoglycerate kinase 1
mm9_v1_chr18_+_31793991_31794055	0.260612	HOX{A6,A7,B6,B7}.p2	BC066030|Sap130|269003|Sin3A associated protein	AK034401|Sap130|269003|Sin3A associated protein	AK053675|Sap130|269003|Sin3A associated protein	AK084078|Sap130|269003|Sin3A associated protein	NM_172965|Sap130|269003|Sin3A associated protein
mm9_v1_chr15_-_98748371_98748661	0.260555	HOX{A6,A7,B6,B7}.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr5_+_72594551_72594730	0.258763	HOX{A6,A7,B6,B7}.p2	AK087333|Atp10d|231287|ATPase, class V, type 10D	AJ441079|Atp10d|231287|ATPase, class V, type 10D	NM_153389|Atp10d|231287|ATPase, class V, type 10D	BC099527|Atp10d|231287|ATPase, class V, type 10D	BC141328|Atp10d|231287|ATPase, class V, type 10D
mm9_v1_chr3_-_144232768_144232936	0.255595	HOX{A6,A7,B6,B7}.p2	AF169243|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AF060178|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	BC059008|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr17_+_56301980_56301995	0.255425	HOX{A6,A7,B6,B7}.p2	AK004949|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	BC032199|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1
mm9_v1_chr2_+_120834141_120834181	0.255395	HOX{A6,A7,B6,B7}.p2	NM_010761|Ccndbp1|17151|cyclin D-type binding-protein 1	AK144883|Ccndbp1|17151|cyclin D-type binding-protein 1	AK160205|Ccndbp1|17151|cyclin D-type binding-protein 1	AK167345|Ccndbp1|17151|cyclin D-type binding-protein 1
mm9_v1_chr8_-_18741546_18741552	0.255227	HOX{A6,A7,B6,B7}.p2	AK143974|Angpt2|11601|angiopoietin 2	AK019860|Angpt2|11601|angiopoietin 2	NM_007426|Angpt2|11601|angiopoietin 2
mm9_v1_chr16_+_36277233_36277264	0.255201	HOX{A6,A7,B6,B7}.p2	NM_001082543|Stfa1|20861|stefin A1	M92417|Stfa1|20861|stefin A1
mm9_v1_chr14_-_55305438_55305460	0.255135	HOX{A6,A7,B6,B7}.p2	AK122342|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012337|Acin1|56215|apoptotic chromatin condensation inducer 1	AK050467|Acin1|56215|apoptotic chromatin condensation inducer 1	BC075691|Acin1|56215|apoptotic chromatin condensation inducer 1	AK030449|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr18_-_34784463_34784463	0.254817	HOX{A6,A7,B6,B7}.p2	NM_030147|Brd8|78656|bromodomain containing 8
mm9_v1_chr17_-_48571942_48571962	0.254745	HOX{A6,A7,B6,B7}.p2	AK009047|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2	BC027530|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm9_v1_chr7_-_64642165_64642240	0.254642	HOX{A6,A7,B6,B7}.p2	X59300|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	BC138962|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	BC138963|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	AK046263|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	NM_008074|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm9_v1_chr12_-_104895293_104895303	0.25462	HOX{A6,A7,B6,B7}.p2	BC013632|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr2_-_30952019_30952019	0.253448	HOX{A6,A7,B6,B7}.p2	AK143512|Fnbp1|14269|formin binding protein 1	NM_001177650|Fnbp1|14269|formin binding protein 1
mm9_v1_chr4_-_144376485_144376485	0.253009	HOX{A6,A7,B6,B7}.p2	NM_001126316|Gm438|329993|predicted gene 438
mm9_v1_chr5_-_115608153_115608220	0.252202	HOX{A6,A7,B6,B7}.p2	AK031525|Mlec|109154|malectin	AK075940|Mlec|109154|malectin	NM_175403|Mlec|109154|malectin
mm9_v1_chr11_-_69495447_69495585	0.251741	HOX{A6,A7,B6,B7}.p2	NM_030702|Senp3|80886|SUMO/sentrin specific peptidase 3	AK088608|Senp3|80886|SUMO/sentrin specific peptidase 3	NM_001163571|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chrX_-_39265047_39265129	0.251676	HOX{A6,A7,B6,B7}.p2	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr17_-_34257327_34257355	0.25156	HOX{A6,A7,B6,B7}.p2	NM_001025387|Brd2|14312|bromodomain containing 2	BC085251|Brd2|14312|bromodomain containing 2
mm9_v1_chr8_+_86939262_86939275	0.251458	HOX{A6,A7,B6,B7}.p2	AK147288|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_007578|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147277|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147498|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147697|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr9_-_53475167_53475249	0.251437	HOX{A6,A7,B6,B7}.p2	AK014894|Cul5|75717|cullin 5	BC037054|Cul5|75717|cullin 5
mm9_v1_chr8_+_36740640_36740782	0.251385	HOX{A6,A7,B6,B7}.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr12_+_78339071_78339134	0.249914	HOX{A6,A7,B6,B7}.p2	BC010666|Fut8|53618|fucosyltransferase 8	AK051811|Fut8|53618|fucosyltransferase 8
mm9_v1_chr13_-_113971103_113971104	0.248615	HOX{A6,A7,B6,B7}.p2	BC117981|Gzmk|14945|granzyme K	NM_008196|Gzmk|14945|granzyme K
mm9_v1_chr18_+_78021267_78021344	0.2486	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_20302299_20302462	0.246625	HOX{A6,A7,B6,B7}.p2	AK039142|Parl|381038|presenilin associated, rhomboid-like	BC083153|Parl|381038|presenilin associated, rhomboid-like	AK151652|Parl|381038|presenilin associated, rhomboid-like	NM_001005767|Parl|381038|presenilin associated, rhomboid-like	AK150980|Parl|381038|presenilin associated, rhomboid-like	AK207637|Parl|381038|presenilin associated, rhomboid-like
mm9_v1_chr2_-_105843408_105843434	0.246367	HOX{A6,A7,B6,B7}.p2	BC030072|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24	AK011571|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24
mm9_v1_chr15_+_82129383_82129413	0.246035	HOX{A6,A7,B6,B7}.p2	AK015863|Wbp2nl|74716|WBP2 N-terminal like	BC119520|Wbp2nl|74716|WBP2 N-terminal like	NM_029066|Wbp2nl|74716|WBP2 N-terminal like
mm9_v1_chr5_-_28793627_28793640	0.245581	HOX{A6,A7,B6,B7}.p2	BC063087|Shh|20423|sonic hedgehog	AK077688|Shh|20423|sonic hedgehog	NM_009170|Shh|20423|sonic hedgehog
mm9_v1_chr6_+_57652594_57652646	0.245439	HOX{A6,A7,B6,B7}.p2	BC016072|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2	AB035967|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr8_+_10006632_10006653	0.245151	HOX{A6,A7,B6,B7}.p2	AF119383|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b	AF352245|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b	NM_033622|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b	AK165081|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b	AK050384|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b	BC106840|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b	BC106841|Tnfsf13b|24099|tumor necrosis factor (ligand) superfamily, member 13b
mm9_v1_chr11_+_59918407_59918514	0.24474	HOX{A6,A7,B6,B7}.p2	BC049785|Rai1|19377|retinoic acid induced 1	NM_009021|Rai1|19377|retinoic acid induced 1
mm9_v1_chr2_-_168415690_168415866	0.244506	HOX{A6,A7,B6,B7}.p2	AF289078|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887582|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887588|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887594|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887600|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001136073|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	U36575|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	U36576|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_010899|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC064006|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK081853|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887584|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887586|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887590|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887592|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887596|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887602|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887604|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037177|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK135414|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887598|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr10_-_40602908_40602950	0.24374	HOX{A6,A7,B6,B7}.p2	AK004569|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK135411|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC061220|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK084140|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC147503|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC158078|Cdc40|71713|cell division cycle 40 homolog (yeast)	NM_027879|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr10_-_14425271_14425365	0.242093	HOX{A6,A7,B6,B7}.p2	AK009227|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	BC026752|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK002611|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	NM_025418|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK003213|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK004323|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)
mm9_v1_chr3_-_89856250_89856452	0.241363	HOX{A6,A7,B6,B7}.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr2_-_17918493_17918584	0.240684	HOX{A6,A7,B6,B7}.p2	AK018883|H2afb1|68231|H2A histone family, member B1	EU079024|H2afb1|68231|H2A histone family, member B1	BC048736|H2afb1|68231|H2A histone family, member B1	AK006586|H2afb1|68231|H2A histone family, member B1	AK018922|H2afb1|68231|H2A histone family, member B1	AK018951|H2afb1|68231|H2A histone family, member B1	AK018962|H2afb1|68231|H2A histone family, member B1	AK160415|H2afb1|68231|H2A histone family, member B1	AK015538|H2afb1|68231|H2A histone family, member B1	AK018839|H2afb1|68231|H2A histone family, member B1	NM_026627|H2afb1|68231|H2A histone family, member B1	BC061062|H2afb1|68231|H2A histone family, member B1
mm9_v1_chr3_+_58380577_58380636	0.240346	HOX{A6,A7,B6,B7}.p2	NM_001040396|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK017528|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK032838|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK047958|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC132453|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC138424|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK013022|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC019970|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK146778|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene
mm9_v1_chr11_+_77796215_77796321	0.239994	HOX{A6,A7,B6,B7}.p2	AK170155|Phf12|268448|PHD finger protein 12	AK089226|Phf12|268448|PHD finger protein 12	AK010807|Phf12|268448|PHD finger protein 12	AK155354|Phf12|268448|PHD finger protein 12	AK053787|Phf12|268448|PHD finger protein 12	NM_174852|Phf12|268448|PHD finger protein 12
mm9_v1_chrX_+_98494487_98494551	0.23968	HOX{A6,A7,B6,B7}.p2	NM_172932|Nlgn3|245537|neuroligin 3	AK039018|Nlgn3|245537|neuroligin 3
mm9_v1_chr6_+_29997972_29998071	0.239454	HOX{A6,A7,B6,B7}.p2	AK082580|Nrf1|18181|nuclear respiratory factor 1	NM_001164226|Nrf1|18181|nuclear respiratory factor 1	NM_001164227|Nrf1|18181|nuclear respiratory factor 1	NM_001164228|Nrf1|18181|nuclear respiratory factor 1	NM_001164230|Nrf1|18181|nuclear respiratory factor 1	NM_010938|Nrf1|18181|nuclear respiratory factor 1	AK029034|Nrf1|18181|nuclear respiratory factor 1	AK014494|Nrf1|18181|nuclear respiratory factor 1	AK036604|Nrf1|18181|nuclear respiratory factor 1	AK037697|Nrf1|18181|nuclear respiratory factor 1	AF098077|Nrf1|18181|nuclear respiratory factor 1	AF064728|Nrf1|18181|nuclear respiratory factor 1	AK050861|Nrf1|18181|nuclear respiratory factor 1	AK134483|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr18_-_50728323_50728377	0.23914	HOX{A6,A7,B6,B7}.p2	AK014922|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	BC048447|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	NM_026108|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	AK007231|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A
mm9_v1_chr7_+_128061257_128061281	0.23867	HOX{A6,A7,B6,B7}.p2	AK005034|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_001164096|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_025298|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr10_+_75610195_75610195	0.238325	HOX{A6,A7,B6,B7}.p2	AF251267|Slc5a4a|64452|solute carrier family 5, member 4a	NM_133184|Slc5a4a|64452|solute carrier family 5, member 4a
mm9_v1_chr16_+_20672854_20672888	0.237893	HOX{A6,A7,B6,B7}.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr10_+_20067606_20067641	0.237028	HOX{A6,A7,B6,B7}.p2	NM_027930|Fam54a|71804|family with sequence similarity 54, member A	BC019132|Fam54a|71804|family with sequence similarity 54, member A	AK011410|Fam54a|71804|family with sequence similarity 54, member A
mm9_v1_chr7_+_71537652_71537662	0.236781	HOX{A6,A7,B6,B7}.p2	BC038157|Mcee|73724|methylmalonyl CoA epimerase	NM_028626|Mcee|73724|methylmalonyl CoA epimerase	AK003511|Mcee|73724|methylmalonyl CoA epimerase
mm9_v1_chr16_-_88885333_88885333	0.236564	HOX{A6,A7,B6,B7}.p2	AF345294|Krtap16-4|170654|keratin associated protein 16-4	BC116200|Krtap16-4|170654|keratin associated protein 16-4	BC116201|Krtap16-4|170654|keratin associated protein 16-4	NM_130873|Krtap16-4|170654|keratin associated protein 16-4
mm9_v1_chr1_-_184212846_184212944	0.23629	HOX{A6,A7,B6,B7}.p2	Y08460|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK149811|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK150908|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK163404|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK077257|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	NM_007853|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK002617|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK165352|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AF466376|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	BC003751|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)
mm9_v1_chr6_-_83781657_83781701	0.235882	HOX{A6,A7,B6,B7}.p2	BC017133|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC034096|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC039969|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK173114|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK168804|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK045922|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr11_-_84729844_84729889	0.235657	HOX{A6,A7,B6,B7}.p2	BC089554|Znhit3|448850|zinc finger, HIT type 3	AK002888|Znhit3|448850|zinc finger, HIT type 3	AK003721|Znhit3|448850|zinc finger, HIT type 3	AK004259|Znhit3|448850|zinc finger, HIT type 3	NM_001005223|Znhit3|448850|zinc finger, HIT type 3	AK014350|Znhit3|448850|zinc finger, HIT type 3
mm9_v1_chr8_-_113917651_113917728	0.235347	HOX{A6,A7,B6,B7}.p2	AY660882|Fa2h|338521|fatty acid 2-hydroxylase	BC046985|Fa2h|338521|fatty acid 2-hydroxylase	BC111912|Fa2h|338521|fatty acid 2-hydroxylase	BC128080|Fa2h|338521|fatty acid 2-hydroxylase	BC128081|Fa2h|338521|fatty acid 2-hydroxylase	AK090338|Fa2h|338521|fatty acid 2-hydroxylase	AK033736|Fa2h|338521|fatty acid 2-hydroxylase	AK161502|Fa2h|338521|fatty acid 2-hydroxylase	NM_178086|Fa2h|338521|fatty acid 2-hydroxylase
mm9_v1_chr9_+_74823917_74823980	0.235034	HOX{A6,A7,B6,B7}.p2	BC031353|BC031353|235493|cDNA sequence BC031353	NM_153584|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr4_-_148800731_148800857	0.234996	HOX{A6,A7,B6,B7}.p2	AK016689|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	NM_022022|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	AF260926|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr1_+_165978346_165978413	0.234969	HOX{A6,A7,B6,B7}.p2	AK153623|Sele|20339|selectin, endothelial cell	M87862|Sele|20339|selectin, endothelial cell	NM_011345|Sele|20339|selectin, endothelial cell	BC119083|Sele|20339|selectin, endothelial cell	BC120795|Sele|20339|selectin, endothelial cell
mm9_v1_chr7_+_116077911_116077933	0.234846	HOX{A6,A7,B6,B7}.p2	AK152037|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	NM_025344|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK002778|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK003372|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK088537|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK136797|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK010333|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr18_+_37581071_37581102	0.234613	HOX{A6,A7,B6,B7}.p2	AK078189|Pcdhb11|93882|protocadherin beta 11	NM_053136|Pcdhb11|93882|protocadherin beta 11	AK160803|Pcdhb11|93882|protocadherin beta 11
mm9_v1_chr19_-_4139516_4139608	0.234513	HOX{A6,A7,B6,B7}.p2	BC029002|Cabp4|73660|calcium binding protein 4	BC053330|Cabp4|73660|calcium binding protein 4	AY039218|Cabp4|73660|calcium binding protein 4	BC049263|Cabp4|73660|calcium binding protein 4	NM_144532|Cabp4|73660|calcium binding protein 4
mm9_v1_chr3_+_95733186_95733221	0.234506	HOX{A6,A7,B6,B7}.p2	AK088401|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK012759|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK049647|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK159446|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK147888|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr4_+_49072138_49072207	0.234478	HOX{A6,A7,B6,B7}.p2	AK031416|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK034251|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK087439|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK160897|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene
mm9_v1_chr6_-_130256444_130256498	0.23433	HOX{A6,A7,B6,B7}.p2	AF204265|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204266|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204267|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204268|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	BC099861|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF074460|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF283250|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283251|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283252|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF307947|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF307948|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	NM_010646|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12
mm9_v1_chr18_+_78012690_78012763	0.234023	HOX{A6,A7,B6,B7}.p2	AK169142|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK166812|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK152054|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK160043|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK098155|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK151128|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK168198|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK151224|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK151920|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK153167|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK169308|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	BC055892|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK146797|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK150426|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK152890|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK164110|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK166709|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK169080|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK169084|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK043976|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK076572|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK151004|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK159491|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK167159|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK168369|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK168879|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK168890|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK168932|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK169105|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK169300|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK150843|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK153282|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK159540|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK159758|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK168617|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK169414|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	BC014854|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	BC020417|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	L01062|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK167863|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr6_+_120043367_120043412	0.233989	HOX{A6,A7,B6,B7}.p2	AF205634|Ninj2|29862|ninjurin 2	NM_016718|Ninj2|29862|ninjurin 2	AK138486|Ninj2|29862|ninjurin 2	AK163748|Ninj2|29862|ninjurin 2	BC116206|Ninj2|29862|ninjurin 2
mm9_v1_chr5_-_65844386_65844460	0.233672	HOX{A6,A7,B6,B7}.p2	BC029314|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene
mm9_v1_chrX_-_163820597_163820686	0.233476	HOX{A6,A7,B6,B7}.p2	AK019169|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK215156|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	BC024942|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK045007|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	NM_026662|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK029690|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK012819|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2
mm9_v1_chr6_+_73226746_73226754	0.233387	HOX{A6,A7,B6,B7}.p2	AK194483|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr2_+_180332926_180333016	0.23332	HOX{A6,A7,B6,B7}.p2	NM_009936|Col9a3|12841|collagen, type IX, alpha 3	AK030350|Col9a3|12841|collagen, type IX, alpha 3	AF349718|Col9a3|12841|collagen, type IX, alpha 3
mm9_v1_chr2_+_129419252_129419410	0.232161	HOX{A6,A7,B6,B7}.p2	Y10349|Sirpa|19261|signal-regulatory protein alpha	BC062197|Sirpa|19261|signal-regulatory protein alpha	U89694|Sirpa|19261|signal-regulatory protein alpha	AB018194|Sirpa|19261|signal-regulatory protein alpha	AF332080|Sirpa|19261|signal-regulatory protein alpha	AF332079|Sirpa|19261|signal-regulatory protein alpha	AF072543|Sirpa|19261|signal-regulatory protein alpha	AF072544|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr1_-_137155012_137155048	0.232133	HOX{A6,A7,B6,B7}.p2	BC138692|Elf3|13710|E74-like factor 3	BC145380|Elf3|13710|E74-like factor 3	AF016294|Elf3|13710|E74-like factor 3	AK143135|Elf3|13710|E74-like factor 3	NM_001163131|Elf3|13710|E74-like factor 3	NM_007921|Elf3|13710|E74-like factor 3
mm9_v1_chr4_-_4720451_4720507	0.230801	HOX{A6,A7,B6,B7}.p2	BC048776|Impad1|242291|inositol monophosphatase domain containing 1	NM_177730|Impad1|242291|inositol monophosphatase domain containing 1	AK045511|Impad1|242291|inositol monophosphatase domain containing 1
mm9_v1_chr11_+_78059210_78059318	0.229253	HOX{A6,A7,B6,B7}.p2	BC058798|Sdf2|20316|stromal cell derived factor 2	NM_009143|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr11_-_95171521_95171560	0.229068	HOX{A6,A7,B6,B7}.p2	AK078483|Myst2|217127|MYST histone acetyltransferase 2	AK166915|Myst2|217127|MYST histone acetyltransferase 2	NM_001195003|Myst2|217127|MYST histone acetyltransferase 2	NM_001195004|Myst2|217127|MYST histone acetyltransferase 2	NM_177619|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr17_-_74715708_74715816	0.229016	HOX{A6,A7,B6,B7}.p2	NM_001146222|Dpy30|66310|dpy-30 homolog (C. elegans)	BC002240|Dpy30|66310|dpy-30 homolog (C. elegans)	AK013073|Dpy30|66310|dpy-30 homolog (C. elegans)	AK077902|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_001146223|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr3_+_37211467_37211494	0.22881	HOX{A6,A7,B6,B7}.p2	NM_001008502|Bbs12|241950|Bardet-Biedl syndrome 12 (human)	AK156806|Bbs12|241950|Bardet-Biedl syndrome 12 (human)
mm9_v1_chr3_+_89862664_89862687	0.227938	HOX{A6,A7,B6,B7}.p2	BC022598|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr10_-_44178372_44178385	0.227926	HOX{A6,A7,B6,B7}.p2	AK149344|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr11_+_95720178_95720317	0.227742	HOX{A6,A7,B6,B7}.p2	AK014714|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene	AK133925|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene
mm9_v1_chr1_+_37426061_37426065	0.227406	HOX{A6,A7,B6,B7}.p2	AK035867|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC120541|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC144747|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC144748|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_172971|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr2_+_173563060_173563229	0.227401	HOX{A6,A7,B6,B7}.p2	BC048231|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	NM_019806|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	BC057123|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK050632|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK081908|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AF115504|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK160925|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK172080|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr5_+_3236388_3236389	0.226961	HOX{A6,A7,B6,B7}.p2	AK146116|Gm15772|100034726|ribosomal protein L26 pseudogene	X80699|Gm15772|100034726|ribosomal protein L26 pseudogene
mm9_v1_chr11_+_115015491_115015512	0.22673	HOX{A6,A7,B6,B7}.p2	BC050757|Rab37|58222|RAB37, member of RAS oncogene family	NM_021411|Rab37|58222|RAB37, member of RAS oncogene family	AK040216|Rab37|58222|RAB37, member of RAS oncogene family	AK039716|Rab37|58222|RAB37, member of RAS oncogene family	AK050483|Rab37|58222|RAB37, member of RAS oncogene family	BC128020|Rab37|58222|RAB37, member of RAS oncogene family	AB232633|Rab37|58222|RAB37, member of RAS oncogene family	AF233582|Rab37|58222|RAB37, member of RAS oncogene family
mm9_v1_chr5_+_145965427_145965536	0.225921	HOX{A6,A7,B6,B7}.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr9_+_66006060_66006077	0.225909	HOX{A6,A7,B6,B7}.p2	AK004350|Dapk2|13143|death-associated protein kinase 2	BC022165|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr4_+_119406425_119406450	0.225329	HOX{A6,A7,B6,B7}.p2	BC024097|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	BC049859|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr2_+_120834184_120834246	0.225303	HOX{A6,A7,B6,B7}.p2	AK154285|Ccndbp1|17151|cyclin D-type binding-protein 1	BC001984|Ccndbp1|17151|cyclin D-type binding-protein 1	AK163150|Ccndbp1|17151|cyclin D-type binding-protein 1	BC005802|Ccndbp1|17151|cyclin D-type binding-protein 1	U50734|Ccndbp1|17151|cyclin D-type binding-protein 1
mm9_v1_chr3_+_135011000_135011069	0.223738	HOX{A6,A7,B6,B7}.p2	AK029525|Nhedc1|74446|Na+/H+ exchanger domain containing 1	NM_028946|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK007064|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK015318|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK016883|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK016917|Nhedc1|74446|Na+/H+ exchanger domain containing 1	BC025002|Nhedc1|74446|Na+/H+ exchanger domain containing 1
mm9_v1_chr2_+_35904992_35905006	0.223607	HOX{A6,A7,B6,B7}.p2	BC048673|Morn5|75495|MORN repeat containing 5	NM_029309|Morn5|75495|MORN repeat containing 5	BC036965|Morn5|75495|MORN repeat containing 5	AK005808|Morn5|75495|MORN repeat containing 5
mm9_v1_chr18_+_33098914_33099011	0.222663	HOX{A6,A7,B6,B7}.p2	AK043114|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	X58995|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr3_+_90145575_90145575	0.222573	HOX{A6,A7,B6,B7}.p2	AF411837|Gatad2b|229542|GATA zinc finger domain containing 2B	BC130262|Gatad2b|229542|GATA zinc finger domain containing 2B	NM_139304|Gatad2b|229542|GATA zinc finger domain containing 2B
mm9_v1_chr6_+_113433656_113433876	0.221862	HOX{A6,A7,B6,B7}.p2	BC025932|Creld1|171508|cysteine-rich with EGF-like domains 1	AK186017|Creld1|171508|cysteine-rich with EGF-like domains 1	AK195695|Creld1|171508|cysteine-rich with EGF-like domains 1	AK208544|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr13_+_47289371_47289389	0.221453	HOX{A6,A7,B6,B7}.p2	AK052846|Rnf144b|218215|ring finger protein 144B	NM_001170643|Rnf144b|218215|ring finger protein 144B	AK040939|Rnf144b|218215|ring finger protein 144B	BC025007|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr7_+_116077936_116077945	0.221293	HOX{A6,A7,B6,B7}.p2	BC070473|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	BC083190|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr7_-_17641980_17642027	0.221192	HOX{A6,A7,B6,B7}.p2	BC120587|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	AF060194|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	NM_016868|Hif3a|53417|hypoxia inducible factor 3, alpha subunit
mm9_v1_chr9_+_108295164_108295164	0.220839	HOX{A6,A7,B6,B7}.p2	AK007115|1700102P08Rik|112418|RIKEN cDNA 1700102P08 gene	BC061048|1700102P08Rik|112418|RIKEN cDNA 1700102P08 gene	NM_053216|1700102P08Rik|112418|RIKEN cDNA 1700102P08 gene
mm9_v1_chr7_-_85722668_85722860	0.220835	HOX{A6,A7,B6,B7}.p2	AY336094|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_008746|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_182809|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	BC139764|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035399|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035400|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3
mm9_v1_chr4_+_62021728_62021759	0.220831	HOX{A6,A7,B6,B7}.p2	NM_175090|Slc31a1|20529|solute carrier family 31, member 1	AK151337|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr9_+_69837253_69837421	0.22003	HOX{A6,A7,B6,B7}.p2	AK169609|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK054288|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_016787|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK159745|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK014659|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161116|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	BC012670|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AF035207|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr1_-_108948879_108948915	0.220028	HOX{A6,A7,B6,B7}.p2	BC063756|Serpinb3a|20248|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A	NM_009126|Serpinb3a|20248|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A
mm9_v1_chr16_+_48283847_48283930	0.219479	HOX{A6,A7,B6,B7}.p2	AK033197|Dppa4|73693|developmental pluripotency associated 4	NM_001018002|Dppa4|73693|developmental pluripotency associated 4	NM_028610|Dppa4|73693|developmental pluripotency associated 4	AK010753|Dppa4|73693|developmental pluripotency associated 4	BC064754|Dppa4|73693|developmental pluripotency associated 4	AF490348|Dppa4|73693|developmental pluripotency associated 4
mm9_v1_chr2_-_113839354_113839354	0.219054	HOX{A6,A7,B6,B7}.p2	BC058595|Gjd2|14617|gap junction protein, delta 2	NM_010290|Gjd2|14617|gap junction protein, delta 2
mm9_v1_chr10_-_83996516_83996534	0.218537	HOX{A6,A7,B6,B7}.p2	AK030708|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr5_-_147396407_147396450	0.218095	HOX{A6,A7,B6,B7}.p2	D21061|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr2_+_152579905_152579917	0.217828	HOX{A6,A7,B6,B7}.p2	AF271382|Cox4i2|84682|cytochrome c oxidase subunit IV isoform 2	NM_053091|Cox4i2|84682|cytochrome c oxidase subunit IV isoform 2
mm9_v1_chr8_-_87956665_87956752	0.217792	HOX{A6,A7,B6,B7}.p2	BC050139|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK169408|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC027027|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK017512|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK014959|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	NM_025722|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr16_-_20734583_20734583	0.217734	HOX{A6,A7,B6,B7}.p2	AK047512|Thpo|21832|thrombopoietin	NM_009379|Thpo|21832|thrombopoietin
mm9_v1_chr19_+_17468498_17468584	0.216893	HOX{A6,A7,B6,B7}.p2	NM_019437|Rfk|54391|riboflavin kinase	AK002806|Rfk|54391|riboflavin kinase
mm9_v1_chr3_+_88425352_88425437	0.216834	HOX{A6,A7,B6,B7}.p2	AK167628|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK171223|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr2_+_23012016_23012208	0.216613	HOX{A6,A7,B6,B7}.p2	AK032273|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AK045141|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AF090430|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AY136287|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	BC007128|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AK079175|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	NM_013771|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AK137665|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AY136286|Yme1l1|27377|YME1-like 1 (S. cerevisiae)
mm9_v1_chr1_-_10710010_10710025	0.216404	HOX{A6,A7,B6,B7}.p2	BC119559|Cpa6|329093|carboxypeptidase A6	BC119560|Cpa6|329093|carboxypeptidase A6	AY773477|Cpa6|329093|carboxypeptidase A6	NM_177834|Cpa6|329093|carboxypeptidase A6	AK078883|Cpa6|329093|carboxypeptidase A6
mm9_v1_chr19_-_45634998_45635032	0.216378	HOX{A6,A7,B6,B7}.p2	AK133087|Poll|56626|polymerase (DNA directed), lambda	AJ131889|Poll|56626|polymerase (DNA directed), lambda	NM_020032|Poll|56626|polymerase (DNA directed), lambda
mm9_v1_chr4_-_117602074_117602133	0.216214	HOX{A6,A7,B6,B7}.p2	AK015393|Artn|11876|artemin	AK145190|Artn|11876|artemin	AK166013|Artn|11876|artemin	AK156507|Artn|11876|artemin
mm9_v1_chr1_-_67085404_67085478	0.215871	HOX{A6,A7,B6,B7}.p2	Y16518|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	BC058560|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	NM_001190984|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	Y11550|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AK146120|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AJ294535|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	NM_001190985|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	NM_021295|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1
mm9_v1_chr18_+_89141181_89141199	0.215861	HOX{A6,A7,B6,B7}.p2	AF265232|Rttn|246102|rotatin	NM_175542|Rttn|246102|rotatin	AK083016|Rttn|246102|rotatin	AK141510|Rttn|246102|rotatin
mm9_v1_chr15_-_76307654_76307703	0.215416	HOX{A6,A7,B6,B7}.p2	BC012693|Bop1|12181|block of proliferation 1	AK129058|Bop1|12181|block of proliferation 1	AK012448|Bop1|12181|block of proliferation 1	AK167829|Bop1|12181|block of proliferation 1	AK079627|Bop1|12181|block of proliferation 1	AK168127|Bop1|12181|block of proliferation 1	AK167110|Bop1|12181|block of proliferation 1	AK167225|Bop1|12181|block of proliferation 1	AK167878|Bop1|12181|block of proliferation 1	NM_013481|Bop1|12181|block of proliferation 1	U77415|Bop1|12181|block of proliferation 1	AK144095|Bop1|12181|block of proliferation 1
mm9_v1_chr4_-_43013217_43013384	0.213672	HOX{A6,A7,B6,B7}.p2	AK149931|Vcp|269523|valosin containing protein	AK151109|Vcp|269523|valosin containing protein	AK151418|Vcp|269523|valosin containing protein	AK146109|Vcp|269523|valosin containing protein	AK169140|Vcp|269523|valosin containing protein	BC043053|Vcp|269523|valosin containing protein	AK028264|Vcp|269523|valosin containing protein	AK159475|Vcp|269523|valosin containing protein	AK159177|Vcp|269523|valosin containing protein	AK153012|Vcp|269523|valosin containing protein	AK167794|Vcp|269523|valosin containing protein	BC049114|Vcp|269523|valosin containing protein	AK153249|Vcp|269523|valosin containing protein	AK159509|Vcp|269523|valosin containing protein	NM_009503|Vcp|269523|valosin containing protein
mm9_v1_chr2_-_70856430_70856434	0.21362	HOX{A6,A7,B6,B7}.p2	NM_001110512|Mettl8|228019|methyltransferase like 8	DQ230973|Mettl8|228019|methyltransferase like 8	DQ230974|Mettl8|228019|methyltransferase like 8
mm9_v1_chr2_+_22924846_22924986	0.21349	HOX{A6,A7,B6,B7}.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr14_+_54873808_54873916	0.213424	HOX{A6,A7,B6,B7}.p2	AK030250|Abhd4|105501|abhydrolase domain containing 4
mm9_v1_chr17_+_56301899_56301970	0.21341	HOX{A6,A7,B6,B7}.p2	AK090348|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	NM_025566|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK150678|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK153177|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK011245|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK136962|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1
mm9_v1_chr14_+_47502637_47502773	0.212938	HOX{A6,A7,B6,B7}.p2	NM_001037221|Samd4|74480|sterile alpha motif domain containing 4	NM_028966|Samd4|74480|sterile alpha motif domain containing 4	AK134243|Samd4|74480|sterile alpha motif domain containing 4	DQ278487|Samd4|74480|sterile alpha motif domain containing 4	AK133470|Samd4|74480|sterile alpha motif domain containing 4	BC145827|Samd4|74480|sterile alpha motif domain containing 4	BC145829|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr5_+_31500917_31501010	0.212675	HOX{A6,A7,B6,B7}.p2	AK212070|Snx17|266781|sorting nexin 17	AK212764|Snx17|266781|sorting nexin 17	AK219074|Snx17|266781|sorting nexin 17	AK219703|Snx17|266781|sorting nexin 17
mm9_v1_chr2_+_169458802_169458807	0.212562	HOX{A6,A7,B6,B7}.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr14_-_35401654_35401841	0.212322	HOX{A6,A7,B6,B7}.p2	AF228057|Ldb3|24131|LIM domain binding 3	AF228058|Ldb3|24131|LIM domain binding 3	AY206011|Ldb3|24131|LIM domain binding 3	AY206015|Ldb3|24131|LIM domain binding 3	AK172980|Ldb3|24131|LIM domain binding 3	NM_001039074|Ldb3|24131|LIM domain binding 3	BC138793|Ldb3|24131|LIM domain binding 3	BC145420|Ldb3|24131|LIM domain binding 3	AK142292|Ldb3|24131|LIM domain binding 3	AF114378|Ldb3|24131|LIM domain binding 3	AY206012|Ldb3|24131|LIM domain binding 3	AF114379|Ldb3|24131|LIM domain binding 3	AY206013|Ldb3|24131|LIM domain binding 3	BC099596|Ldb3|24131|LIM domain binding 3
mm9_v1_chr18_+_35989376_35989483	0.212319	HOX{A6,A7,B6,B7}.p2	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chr17_+_35978442_35978442	0.212164	HOX{A6,A7,B6,B7}.p2	NM_001010833|Mdc1|240087|mediator of DNA damage checkpoint 1
mm9_v1_chrX_+_130593711_130593811	0.212108	HOX{A6,A7,B6,B7}.p2	AK049971|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	AK032817|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	AF317552|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	EU616680|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	EU616681|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	EU616682|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2	BC036719|Cstf2|108062|cleavage stimulation factor, 3' pre-RNA subunit 2
mm9_v1_chr6_-_113145321_113145377	0.212028	HOX{A6,A7,B6,B7}.p2	AK220449|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	BC085130|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	AK046437|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	NM_177763|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4
mm9_v1_chr9_+_46091073_46091104	0.210535	HOX{A6,A7,B6,B7}.p2	AK038126|Bud13|215051|BUD13 homolog (yeast)	AK051047|Bud13|215051|BUD13 homolog (yeast)	AK077744|Bud13|215051|BUD13 homolog (yeast)	NM_146000|Bud13|215051|BUD13 homolog (yeast)	AK037134|Bud13|215051|BUD13 homolog (yeast)	BC025490|Bud13|215051|BUD13 homolog (yeast)
mm9_v1_chr3_-_107820705_107820751	0.210144	HOX{A6,A7,B6,B7}.p2	J03952|Gstm1|14862|glutathione S-transferase, mu 1	BC003822|Gstm1|14862|glutathione S-transferase, mu 1	BC091763|Gstm1|14862|glutathione S-transferase, mu 1	BC046758|Gstm1|14862|glutathione S-transferase, mu 1
mm9_v1_chr4_+_80556574_80556717	0.209461	HOX{A6,A7,B6,B7}.p2	NM_026821|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC030404|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC021501|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed
mm9_v1_chr17_-_86566816_86566826	0.209375	HOX{A6,A7,B6,B7}.p2	AK135560|Gm5817|545228|predicted gene 5817
mm9_v1_chr9_-_21807054_21807077	0.209269	HOX{A6,A7,B6,B7}.p2	AK021166|Ccdc151|77609|coiled-coil domain containing 151	AK031175|Ccdc151|77609|coiled-coil domain containing 151	NM_001163787|Ccdc151|77609|coiled-coil domain containing 151	NM_029939|Ccdc151|77609|coiled-coil domain containing 151
mm9_v1_chr12_+_77182878_77182935	0.208925	HOX{A6,A7,B6,B7}.p2	FJ848978|Syne2|319565|synaptic nuclear envelope 2
mm9_v1_chr2_+_130230994_130231035	0.208705	HOX{A6,A7,B6,B7}.p2	NM_029375|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC049710|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	NM_001163483|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC137914|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC137915|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene
mm9_v1_chr4_+_108534484_108534486	0.208569	HOX{A6,A7,B6,B7}.p2	AK200396|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)
mm9_v1_chr3_-_108692732_108692925	0.207649	HOX{A6,A7,B6,B7}.p2	BC111898|Fndc7|320181|fibronectin type III domain containing 7	BC113188|Fndc7|320181|fibronectin type III domain containing 7	AK053989|Fndc7|320181|fibronectin type III domain containing 7	AK054241|Fndc7|320181|fibronectin type III domain containing 7	NM_001165965|Fndc7|320181|fibronectin type III domain containing 7	NM_177091|Fndc7|320181|fibronectin type III domain containing 7
mm9_v1_chr17_-_24300592_24300754	0.207591	HOX{A6,A7,B6,B7}.p2	AK168432|Amdhd2|245847|amidohydrolase domain containing 2	AK078259|Amdhd2|245847|amidohydrolase domain containing 2	AK077584|Amdhd2|245847|amidohydrolase domain containing 2	AK159860|Amdhd2|245847|amidohydrolase domain containing 2	AK090009|Amdhd2|245847|amidohydrolase domain containing 2	AK154209|Amdhd2|245847|amidohydrolase domain containing 2	NM_172935|Amdhd2|245847|amidohydrolase domain containing 2
mm9_v1_chr8_+_24521967_24522003	0.207271	HOX{A6,A7,B6,B7}.p2	AK088868|Sfrp1|20377|secreted frizzled-related protein 1	NM_013834|Sfrp1|20377|secreted frizzled-related protein 1	BC094662|Sfrp1|20377|secreted frizzled-related protein 1	U88566|Sfrp1|20377|secreted frizzled-related protein 1	BC024495|Sfrp1|20377|secreted frizzled-related protein 1
mm9_v1_chr11_-_46503858_46503858	0.207249	HOX{A6,A7,B6,B7}.p2	AB009015|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2	NM_001161356|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr9_-_78329444_78329551	0.206821	HOX{A6,A7,B6,B7}.p2	BC092053|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC095965|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC108391|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC018223|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC018485|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC083069|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	M22432|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK162313|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166615|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK167873|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK032914|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK050635|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK151479|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK162440|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK164113|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK168467|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK003188|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK011771|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK012341|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK076696|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK081725|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK083361|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK088041|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK133725|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK135448|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK137223|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK141243|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK150798|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK151773|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK152810|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK152993|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK153387|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK153402|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK153851|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK162049|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK163799|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK164671|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK165938|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166021|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166033|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166058|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166089|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK166807|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK167843|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK168424|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	NM_010106|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr13_+_23627286_23627290	0.206745	HOX{A6,A7,B6,B7}.p2	NM_145073|Hist1h3g|97908|histone cluster 1, H3g	BC125355|Hist1h3g|97908|histone cluster 1, H3g	BC125357|Hist1h3g|97908|histone cluster 1, H3g
mm9_v1_chr4_+_132324212_132324345	0.206714	HOX{A6,A7,B6,B7}.p2	AK078006|Rpa2|19891|replication protein A2	AK169847|Rpa2|19891|replication protein A2	AK168680|Rpa2|19891|replication protein A2	NM_011284|Rpa2|19891|replication protein A2	BC004578|Rpa2|19891|replication protein A2	AK011530|Rpa2|19891|replication protein A2	D00812|Rpa2|19891|replication protein A2
mm9_v1_chr14_+_21167383_21167391	0.206625	HOX{A6,A7,B6,B7}.p2	AK031973|Fam149b|105428|family with sequence similarity 149, member B	NM_001177633|Fam149b|105428|family with sequence similarity 149, member B	NM_172379|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr4_-_33276711_33276711	0.206526	HOX{A6,A7,B6,B7}.p2	AK145296|Pm20d2|242377|peptidase M20 domain containing 2	NM_001034867|Pm20d2|242377|peptidase M20 domain containing 2
mm9_v1_chr15_+_57747523_57747567	0.206439	HOX{A6,A7,B6,B7}.p2	AK084542|Wdr67|210544|WD repeat domain 67
mm9_v1_chr15_+_96199877_96199934	0.20635	HOX{A6,A7,B6,B7}.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr11_-_106077627_106077641	0.205949	HOX{A6,A7,B6,B7}.p2	AK132273|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr5_-_122497833_122497833	0.205922	HOX{A6,A7,B6,B7}.p2	BC065113|Cux2|13048|cut-like homeobox 2	NM_007804|Cux2|13048|cut-like homeobox 2
mm9_v1_chr2_+_173902521_173902654	0.205532	HOX{A6,A7,B6,B7}.p2	AK078110|Stx16|228960|syntaxin 16	NM_001102423|Stx16|228960|syntaxin 16	NM_001102424|Stx16|228960|syntaxin 16	NM_001102425|Stx16|228960|syntaxin 16	NM_172675|Stx16|228960|syntaxin 16	BC094436|Stx16|228960|syntaxin 16	BC095989|Stx16|228960|syntaxin 16	BC138544|Stx16|228960|syntaxin 16
mm9_v1_chr16_+_93832365_93832557	0.204942	HOX{A6,A7,B6,B7}.p2	AK172896|Morc3|338467|microrchidia 3	NM_001045529|Morc3|338467|microrchidia 3	BC145705|Morc3|338467|microrchidia 3	AK144885|Morc3|338467|microrchidia 3	AK132226|Morc3|338467|microrchidia 3	BC098072|Morc3|338467|microrchidia 3
mm9_v1_chr2_-_168427037_168427156	0.204685	HOX{A6,A7,B6,B7}.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr17_-_37095420_37095443	0.204048	HOX{A6,A7,B6,B7}.p2	AK005976|Znrd1|66136|zinc ribbon domain containing, 1	AK019152|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr12_-_82669460_82669460	0.20403	HOX{A6,A7,B6,B7}.p2	AK014827|Adam21|56622|a disintegrin and metallopeptidase domain 21	NM_020330|Adam21|56622|a disintegrin and metallopeptidase domain 21
mm9_v1_chr11_-_70051346_70051356	0.203855	HOX{A6,A7,B6,B7}.p2	BC055357|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr5_+_137462888_137462891	0.20323	HOX{A6,A7,B6,B7}.p2	BC054734|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	NM_011962|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	BC043047|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr9_-_75407338_75407491	0.203018	HOX{A6,A7,B6,B7}.p2	AF237630|Tmod3|50875|tropomodulin 3	AF177172|Tmod3|50875|tropomodulin 3	BC082595|Tmod3|50875|tropomodulin 3	AK167723|Tmod3|50875|tropomodulin 3	AK017725|Tmod3|50875|tropomodulin 3	AK050372|Tmod3|50875|tropomodulin 3	AK082971|Tmod3|50875|tropomodulin 3	AK147017|Tmod3|50875|tropomodulin 3	AK169218|Tmod3|50875|tropomodulin 3	NM_016963|Tmod3|50875|tropomodulin 3
mm9_v1_chr5_+_73039034_73039056	0.201593	HOX{A6,A7,B6,B7}.p2	AK075654|Nipal1|70701|NIPA-like domain containing 1	NM_001081205|Nipal1|70701|NIPA-like domain containing 1
mm9_v1_chr15_-_101524677_101524737	0.20146	HOX{A6,A7,B6,B7}.p2	BC122884|Krt6b|16688|keratin 6B	BC124556|Krt6b|16688|keratin 6B	BC119554|Krt6b|16688|keratin 6B	BC119555|Krt6b|16688|keratin 6B	BC139807|Krt6b|16688|keratin 6B	BC064470|Krt6a|16687|keratin 6A	K02108|Krt6a|16687|keratin 6A	BC080820|Krt6a|16687|keratin 6A	NM_008476|Krt6a|16687|keratin 6A	AK009394|Krt6a|16687|keratin 6A
mm9_v1_chr5_-_23218477_23218493	0.200765	HOX{A6,A7,B6,B7}.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr3_+_88420058_88420079	0.200503	HOX{A6,A7,B6,B7}.p2	AK158232|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr1_-_135517936_135517963	0.200099	HOX{A6,A7,B6,B7}.p2	AK003350|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr11_+_120459840_120459845	0.198921	HOX{A6,A7,B6,B7}.p2	NM_001038230|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chrX_-_101866123_101866164	0.198355	HOX{A6,A7,B6,B7}.p2	AK032922|Zdhhc15|108672|zinc finger, DHHC domain containing 15	AK029137|Zdhhc15|108672|zinc finger, DHHC domain containing 15	AK160360|Zdhhc15|108672|zinc finger, DHHC domain containing 15	AK077949|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr6_-_83781704_83781750	0.19792	HOX{A6,A7,B6,B7}.p2	AK140686|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK159287|Paip2b|232164|poly(A) binding protein interacting protein 2B	NM_146169|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr13_+_21902235_21902335	0.197723	HOX{A6,A7,B6,B7}.p2	BC147161|Hist1h2ap|319171|histone cluster 1, H2ap	BC147162|Hist1h2ap|319171|histone cluster 1, H2ap	NM_001177544|Hist1h2ao|665433|histone cluster 1, H2ao	AK145443|Hist1h2ap|319171|histone cluster 1, H2ap	AK146846|Hist1h2ap|319171|histone cluster 1, H2ap	BC062251|Hist1h2ap|319171|histone cluster 1, H2ap	BC090402|Hist1h2ap|319171|histone cluster 1, H2ap	BC110626|Hist1h2ap|319171|histone cluster 1, H2ap	BC116373|Hist1h2ai|319191|histone cluster 1, H2ai	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	BC133661|Hist1h2ap|319171|histone cluster 1, H2ap	BC134370|Hist1h2ah|319168|histone cluster 1, H2ah	NM_178185|Hist1h2ap|319171|histone cluster 1, H2ap
mm9_v1_chr7_-_109835767_109835842	0.197581	HOX{A6,A7,B6,B7}.p2	BC034249|Trim68|101700|tripartite motif-containing 68	AK164544|Trim68|101700|tripartite motif-containing 68	AK089546|Trim68|101700|tripartite motif-containing 68	AK155267|Trim68|101700|tripartite motif-containing 68	NM_198012|Trim68|101700|tripartite motif-containing 68
mm9_v1_chr10_-_8605668_8605870	0.197452	HOX{A6,A7,B6,B7}.p2	AJ507736|Sash1|70097|SAM and SH3 domain containing 1	AK149872|Sash1|70097|SAM and SH3 domain containing 1	AK049453|Sash1|70097|SAM and SH3 domain containing 1	NM_175155|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr5_-_149363989_149364264	0.197275	HOX{A6,A7,B6,B7}.p2	BC025595|Ubl3|24109|ubiquitin-like 3	AK145952|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr4_-_118081793_118081882	0.197186	HOX{A6,A7,B6,B7}.p2	GU433214|Szt2|230676|seizure threshold 2	FJ998170|Szt2|230676|seizure threshold 2	NM_198170|Szt2|230676|seizure threshold 2
mm9_v1_chr13_-_24026024_24026024	0.196619	HOX{A6,A7,B6,B7}.p2	BC126923|Hist1h2ba|319177|histone cluster 1, H2ba	NM_175663|Hist1h2ba|319177|histone cluster 1, H2ba
mm9_v1_chr2_+_162843196_162843279	0.196444	HOX{A6,A7,B6,B7}.p2	AK160745|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	AK088467|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	NM_172150|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	AK144188|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	BC037708|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)
mm9_v1_chr4_+_114732112_114732131	0.195971	HOX{A6,A7,B6,B7}.p2	AK144164|Tal1|21349|T-cell acute lymphocytic leukemia 1	M59764|Tal1|21349|T-cell acute lymphocytic leukemia 1	NM_011527|Tal1|21349|T-cell acute lymphocytic leukemia 1
mm9_v1_chr2_+_26934862_26934948	0.195639	HOX{A6,A7,B6,B7}.p2	AK156991|Adamtsl2|77794|ADAMTS-like 2	AB096928|Adamtsl2|77794|ADAMTS-like 2	NM_029981|Adamtsl2|77794|ADAMTS-like 2	BC128568|Adamtsl2|77794|ADAMTS-like 2	BC129984|Adamtsl2|77794|ADAMTS-like 2
mm9_v1_chr1_+_134195202_134195202	0.194906	HOX{A6,A7,B6,B7}.p2	AK080356|Klhdc8a|213417|kelch domain containing 8A	NM_144810|Klhdc8a|213417|kelch domain containing 8A
mm9_v1_chr3_-_135354500_135354532	0.193648	HOX{A6,A7,B6,B7}.p2	BC050841|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	NM_008689|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr17_+_35196041_35196046	0.19335	HOX{A6,A7,B6,B7}.p2	AF004106|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2
mm9_v1_chr4_-_33335761_33335761	0.193146	HOX{A6,A7,B6,B7}.p2	NM_001033225|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr1_-_18255160_18255218	0.192525	HOX{A6,A7,B6,B7}.p2	DQ012028|Gm15386|654464|predicted gene 15386	NM_001040027|Gm15386|654464|predicted gene 15386	AK020304|Defb41|77673|defensin beta 41	DQ012027|Defb41|77673|defensin beta 41	NM_183124|Defb41|77673|defensin beta 41
mm9_v1_chr12_-_93087514_93087619	0.192245	HOX{A6,A7,B6,B7}.p2	AF063095|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160936|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	BC026816|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005023|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK146022|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK161546|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160420|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005544|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK220502|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_001039089|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_011344|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)
mm9_v1_chr6_-_53770406_53770488	0.191728	HOX{A6,A7,B6,B7}.p2	AK122338|Tril|66873|TLR4 interactor with leucine-rich repeats	AK033401|Tril|66873|TLR4 interactor with leucine-rich repeats	AK004681|Tril|66873|TLR4 interactor with leucine-rich repeats
mm9_v1_chr5_-_149862867_149863025	0.191651	HOX{A6,A7,B6,B7}.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr16_-_19884312_19884367	0.191188	HOX{A6,A7,B6,B7}.p2	BC053981|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene	AK153879|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene	AK086168|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr11_+_20991321_20991416	0.191116	HOX{A6,A7,B6,B7}.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr2_+_155833791_155833870	0.190734	HOX{A6,A7,B6,B7}.p2	BC057130|Ergic3|66366|ERGIC and golgi 3	AK050285|Ergic3|66366|ERGIC and golgi 3	BC043720|Ergic3|66366|ERGIC and golgi 3	AK009350|Ergic3|66366|ERGIC and golgi 3	AK013942|Ergic3|66366|ERGIC and golgi 3	NM_025516|Ergic3|66366|ERGIC and golgi 3
mm9_v1_chr17_-_71948080_71948114	0.190178	HOX{A6,A7,B6,B7}.p2	AK032413|Trmt61b|68789|tRNA methyltransferase 61 homolog B (S. cerevisiae)	AK036113|Trmt61b|68789|tRNA methyltransferase 61 homolog B (S. cerevisiae)
mm9_v1_chr12_-_99812921_99812948	0.189982	HOX{A6,A7,B6,B7}.p2	AK019376|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr4_-_14723198_14723206	0.189958	HOX{A6,A7,B6,B7}.p2	AK161371|Lrrc69|73314|leucine rich repeat containing 69	NM_028499|Lrrc69|73314|leucine rich repeat containing 69	AK006601|Lrrc69|73314|leucine rich repeat containing 69
mm9_v1_chr12_-_105011795_105011804	0.189875	HOX{A6,A7,B6,B7}.p2	AK002537|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr2_-_73613381_73613446	0.189466	HOX{A6,A7,B6,B7}.p2	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr1_-_78193381_78193710	0.189424	HOX{A6,A7,B6,B7}.p2	BC048699|Pax3|18505|paired box gene 3	AK157760|Pax3|18505|paired box gene 3	AK012493|Pax3|18505|paired box gene 3	AK014337|Pax3|18505|paired box gene 3	AK044985|Pax3|18505|paired box gene 3	AK144973|Pax3|18505|paired box gene 3	AK147919|Pax3|18505|paired box gene 3	X59358|Pax3|18505|paired box gene 3	AK048723|Pax3|18505|paired box gene 3	AK083424|Pax3|18505|paired box gene 3	AK148354|Pax3|18505|paired box gene 3	AK045018|Pax3|18505|paired box gene 3	NM_001159520|Pax3|18505|paired box gene 3	NM_008781|Pax3|18505|paired box gene 3
mm9_v1_chr17_+_87362450_87362450	0.189039	HOX{A6,A7,B6,B7}.p2	BC056363|Rhoq|104215|ras homolog gene family, member Q	NM_145491|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr4_-_115726385_115726456	0.188967	HOX{A6,A7,B6,B7}.p2	BC024628|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr2_-_4984983_4985031	0.188906	HOX{A6,A7,B6,B7}.p2	BC061185|Optn|71648|optineurin	NM_181848|Optn|71648|optineurin
mm9_v1_chr2_+_170557306_170557456	0.188238	HOX{A6,A7,B6,B7}.p2	BC066822|Dok5|76829|docking protein 5	NM_001163686|Dok5|76829|docking protein 5	NM_029761|Dok5|76829|docking protein 5	AK044148|Dok5|76829|docking protein 5	AF418208|Dok5|76829|docking protein 5
mm9_v1_chr11_-_120486280_120486339	0.187754	HOX{A6,A7,B6,B7}.p2	BC026403|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC040759|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026637|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026650|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AY251540|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK051725|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK135484|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	NM_153056|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)
mm9_v1_chr3_+_95733228_95733353	0.186974	HOX{A6,A7,B6,B7}.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr6_+_21899614_21899692	0.186691	HOX{A6,A7,B6,B7}.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr9_-_78226334_78226394	0.186205	HOX{A6,A7,B6,B7}.p2	AB283026|Ooep|67968|oocyte expressed protein homolog (dog)	BC062245|Ooep|67968|oocyte expressed protein homolog (dog)	AK133554|Ooep|67968|oocyte expressed protein homolog (dog)	AK135950|Ooep|67968|oocyte expressed protein homolog (dog)	AK136199|Ooep|67968|oocyte expressed protein homolog (dog)	AK145510|Ooep|67968|oocyte expressed protein homolog (dog)	AK010266|Ooep|67968|oocyte expressed protein homolog (dog)	AK010809|Ooep|67968|oocyte expressed protein homolog (dog)	DQ238107|Ooep|67968|oocyte expressed protein homolog (dog)	NM_026480|Ooep|67968|oocyte expressed protein homolog (dog)
mm9_v1_chr2_-_21126852_21126991	0.185397	HOX{A6,A7,B6,B7}.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr8_-_73046985_73047078	0.184173	HOX{A6,A7,B6,B7}.p2	AK155003|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK013135|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK002695|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC048938|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC053944|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	NM_029366|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene
mm9_v1_chr13_-_49748055_49748114	0.184103	HOX{A6,A7,B6,B7}.p2	AK014919|Cenpp|66336|centromere protein P	BC147207|Cenpp|66336|centromere protein P	BC147208|Cenpp|66336|centromere protein P	AK012863|Cenpp|66336|centromere protein P	NM_025495|Cenpp|66336|centromere protein P	AK006234|Cenpp|66336|centromere protein P
mm9_v1_chr8_-_66684789_66684808	0.183988	HOX{A6,A7,B6,B7}.p2	NM_009390|Tll1|21892|tolloid-like	U34042|Tll1|21892|tolloid-like	AK080919|Tll1|21892|tolloid-like
mm9_v1_chr9_-_21564723_21564737	0.183915	HOX{A6,A7,B6,B7}.p2	AK031680|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK075950|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC116238|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC116239|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_026282|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC086683|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC056965|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC098472|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr4_+_48552806_48552952	0.183629	HOX{A6,A7,B6,B7}.p2	AK075956|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145925|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK017795|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK011381|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145924|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr2_-_35904792_35904897	0.183593	HOX{A6,A7,B6,B7}.p2	BC024673|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	BC012416|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	AK002744|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	NM_026703|Ndufa8|68375|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8
mm9_v1_chr14_+_21514178_21514220	0.183488	HOX{A6,A7,B6,B7}.p2	NM_028428|Fut11|73068|fucosyltransferase 11	AJ542393|Fut11|73068|fucosyltransferase 11	AK029717|Fut11|73068|fucosyltransferase 11	AK030310|Fut11|73068|fucosyltransferase 11	AK046461|Fut11|73068|fucosyltransferase 11	BC138555|Fut11|73068|fucosyltransferase 11	BC145735|Fut11|73068|fucosyltransferase 11	AK032390|Fut11|73068|fucosyltransferase 11	AK014029|Fut11|73068|fucosyltransferase 11
mm9_v1_chr11_+_97699719_97699824	0.183333	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr9_+_3404047_3404117	0.183241	HOX{A6,A7,B6,B7}.p2	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr9_-_36954858_36954932	0.182643	HOX{A6,A7,B6,B7}.p2	NM_148950|Pknox2|208076|Pbx/knotted 1 homeobox 2
mm9_v1_chr9_+_63450444_63450525	0.182485	HOX{A6,A7,B6,B7}.p2	AK159897|Aagab|66939|alpha- and gamma-adaptin binding protein	NM_025857|Aagab|66939|alpha- and gamma-adaptin binding protein	BC027311|Aagab|66939|alpha- and gamma-adaptin binding protein	AK017714|Aagab|66939|alpha- and gamma-adaptin binding protein
mm9_v1_chr14_-_35401845_35401867	0.182306	HOX{A6,A7,B6,B7}.p2	AK084461|Ldb3|24131|LIM domain binding 3	AK137181|Ldb3|24131|LIM domain binding 3	AJ005621|Ldb3|24131|LIM domain binding 3	NM_001039071|Ldb3|24131|LIM domain binding 3	NM_001039072|Ldb3|24131|LIM domain binding 3	NM_001039073|Ldb3|24131|LIM domain binding 3	NM_001039075|Ldb3|24131|LIM domain binding 3	NM_001039076|Ldb3|24131|LIM domain binding 3	NM_011918|Ldb3|24131|LIM domain binding 3	AK004020|Ldb3|24131|LIM domain binding 3
mm9_v1_chr10_-_74495269_74495330	0.181963	HOX{A6,A7,B6,B7}.p2	BC147792|Rtdr1|71236|rhabdoid tumor deletion region gene 1	BC147801|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163534|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163535|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK017008|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK077078|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163533|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_027730|Rtdr1|71236|rhabdoid tumor deletion region gene 1
mm9_v1_chr19_+_41904459_41904605	0.181856	HOX{A6,A7,B6,B7}.p2	NM_008043|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	AK015680|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	BC140987|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	U58974|Frat1|14296|frequently rearranged in advanced T-cell lymphomas
mm9_v1_chr4_+_116393559_116393581	0.181772	HOX{A6,A7,B6,B7}.p2	AK047755|Tesk2|230661|testis-specific kinase 2	NM_146151|Tesk2|230661|testis-specific kinase 2	AK031814|Tesk2|230661|testis-specific kinase 2	AK053368|Tesk2|230661|testis-specific kinase 2	BC029766|Tesk2|230661|testis-specific kinase 2
mm9_v1_chr5_+_93112640_93112650	0.181539	HOX{A6,A7,B6,B7}.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr7_-_116875215_116875245	0.180953	HOX{A6,A7,B6,B7}.p2	AJ277605|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	AB046448|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104347|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104346|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	NM_020051|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)
mm9_v1_chr3_+_28704357_28704400	0.180809	HOX{A6,A7,B6,B7}.p2	BC120716|Rpl22l1|68028|ribosomal protein L22 like 1	BC120718|Rpl22l1|68028|ribosomal protein L22 like 1
mm9_v1_chr11_+_78156930_78157077	0.180462	HOX{A6,A7,B6,B7}.p2	AF030169|Unc119|22248|unc-119 homolog (C. elegans)	AK131955|Unc119|22248|unc-119 homolog (C. elegans)	BC001990|Unc119|22248|unc-119 homolog (C. elegans)	NM_011676|Unc119|22248|unc-119 homolog (C. elegans)
mm9_v1_chr3_+_103636523_103636782	0.180013	HOX{A6,A7,B6,B7}.p2	AF014453|Bcl2l15|229672|BCLl2-like 15	BC117780|Bcl2l15|229672|BCLl2-like 15	BC117781|Bcl2l15|229672|BCLl2-like 15	BC128505|Bcl2l15|229672|BCLl2-like 15	BC128506|Bcl2l15|229672|BCLl2-like 15	NM_001142959|Bcl2l15|229672|BCLl2-like 15	NM_001142960|Bcl2l15|229672|BCLl2-like 15	BC052523|Bcl2l15|229672|BCLl2-like 15	BC027668|Bcl2l15|229672|BCLl2-like 15
mm9_v1_chr4_-_131885399_131885463	0.179658	HOX{A6,A7,B6,B7}.p2	AK152986|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	BC048840|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	BC005795|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	BC055454|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	AK003534|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1	NM_027925|Trnau1ap|71787|tRNA selenocysteine 1 associated protein 1
mm9_v1_chr7_-_38804503_38804582	0.179553	HOX{A6,A7,B6,B7}.p2	AK160558|C80913|19777|expressed sequence C80913	AK155994|C80913|19777|expressed sequence C80913	AK166566|C80913|19777|expressed sequence C80913	AK170929|C80913|19777|expressed sequence C80913	NM_011274|C80913|19777|expressed sequence C80913
mm9_v1_chr11_-_70051361_70051426	0.179285	HOX{A6,A7,B6,B7}.p2	AK169173|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK170380|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK003842|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177601|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177603|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177606|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177607|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_026757|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_145758|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr10_-_41738158_41738199	0.177658	HOX{A6,A7,B6,B7}.p2	AK011447|Armc2|213402|armadillo repeat containing 2	NM_001034858|Armc2|213402|armadillo repeat containing 2
mm9_v1_chr11_-_101285982_101286065	0.177625	HOX{A6,A7,B6,B7}.p2	BC141198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr13_+_56805028_56805028	0.177461	HOX{A6,A7,B6,B7}.p2	AK082997|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164042|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chr4_+_124377942_124377978	0.176105	HOX{A6,A7,B6,B7}.p2	NM_010213|Fhl3|14201|four and a half LIM domains 3	AF114382|Fhl3|14201|four and a half LIM domains 3	BC144903|Fhl3|14201|four and a half LIM domains 3	BC145939|Fhl3|14201|four and a half LIM domains 3
mm9_v1_chr16_+_37868511_37868587	0.176033	HOX{A6,A7,B6,B7}.p2	AK147818|Lrrc58|320184|leucine rich repeat containing 58	BC141007|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr17_+_37095536_37095635	0.175642	HOX{A6,A7,B6,B7}.p2	BC027007|Znrd1as|76416|ZNRD1 antisense RNA	NM_029602|Znrd1as|76416|ZNRD1 antisense RNA	AK006236|Znrd1as|76416|ZNRD1 antisense RNA	AK161503|Znrd1as|76416|ZNRD1 antisense RNA
mm9_v1_chr7_-_5962611_5962611	0.175273	HOX{A6,A7,B6,B7}.p2	AF324870|Vmn1r65|81013|vomeronasal 1 receptor 65	NM_030738|Vmn1r65|81013|vomeronasal 1 receptor 65
mm9_v1_chr1_+_75232981_75232997	0.175159	HOX{A6,A7,B6,B7}.p2	NM_001159883|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_001159884|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_020266|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	NM_178055|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr6_-_113481340_113481484	0.175072	HOX{A6,A7,B6,B7}.p2	AK206599|Tmem111|66087|transmembrane protein 111	AK213319|Tmem111|66087|transmembrane protein 111	AK218418|Tmem111|66087|transmembrane protein 111	AK167819|Tmem111|66087|transmembrane protein 111
mm9_v1_chr8_-_85856284_85856386	0.174753	HOX{A6,A7,B6,B7}.p2	AK041137|Elmod2|244548|ELMO domain containing 2	AK165222|Elmod2|244548|ELMO domain containing 2	AK036746|Elmod2|244548|ELMO domain containing 2	BC079654|Elmod2|244548|ELMO domain containing 2	AK029044|Elmod2|244548|ELMO domain containing 2	AK036607|Elmod2|244548|ELMO domain containing 2	AK084950|Elmod2|244548|ELMO domain containing 2	NM_001170691|Elmod2|244548|ELMO domain containing 2	NM_178736|Elmod2|244548|ELMO domain containing 2
mm9_v1_chr17_+_36131397_36131470	0.174101	HOX{A6,A7,B6,B7}.p2	AK078380|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK020860|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK142942|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	BC055918|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene
mm9_v1_chr7_+_148068262_148068416	0.173546	HOX{A6,A7,B6,B7}.p2	AK075936|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	NM_011875|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK081160|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK163017|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK051078|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK167169|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK171504|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139184|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139187|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK145654|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AF107838|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC029989|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK206994|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm9_v1_chr12_-_119437515_119437515	0.173546	HOX{A6,A7,B6,B7}.p2	AF183144|Dnahc11|13411|dynein, axonemal, heavy chain 11	NM_010060|Dnahc11|13411|dynein, axonemal, heavy chain 11
mm9_v1_chr14_+_69647294_69647485	0.173457	HOX{A6,A7,B6,B7}.p2	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr1_-_82583400_82583423	0.172856	HOX{A6,A7,B6,B7}.p2	AK164732|Col4a4|12829|collagen, type IV, alpha 4	NM_007735|Col4a4|12829|collagen, type IV, alpha 4
mm9_v1_chr11_+_115425756_115425843	0.172687	HOX{A6,A7,B6,B7}.p2	NM_001002929|Nup85|445007|nucleoporin 85	BC079856|Nup85|445007|nucleoporin 85	AK017632|Nup85|445007|nucleoporin 85	AF498263|Nup85|445007|nucleoporin 85
mm9_v1_chr9_+_108362848_108362907	0.172581	HOX{A6,A7,B6,B7}.p2	NM_133744|Ccdc71|72454|coiled-coil domain containing 71	AK085544|Ccdc71|72454|coiled-coil domain containing 71	AK079333|Ccdc71|72454|coiled-coil domain containing 71	AK011229|Ccdc71|72454|coiled-coil domain containing 71	AK044601|Ccdc71|72454|coiled-coil domain containing 71	AK086560|Ccdc71|72454|coiled-coil domain containing 71	AK149878|Ccdc71|72454|coiled-coil domain containing 71	AK136982|Ccdc71|72454|coiled-coil domain containing 71	BC018518|Ccdc71|72454|coiled-coil domain containing 71
mm9_v1_chr17_+_57201623_57201743	0.172007	HOX{A6,A7,B6,B7}.p2	AK077528|Crb3|224912|crumbs homolog 3 (Drosophila)	AK167279|Crb3|224912|crumbs homolog 3 (Drosophila)	BC024462|Crb3|224912|crumbs homolog 3 (Drosophila)	NM_177638|Crb3|224912|crumbs homolog 3 (Drosophila)
mm9_v1_chr7_-_17613079_17613266	0.171551	HOX{A6,A7,B6,B7}.p2	U12204|Ppp5c|19060|protein phosphatase 5, catalytic subunit	BC003744|Ppp5c|19060|protein phosphatase 5, catalytic subunit	AF018262|Ppp5c|19060|protein phosphatase 5, catalytic subunit	NM_011155|Ppp5c|19060|protein phosphatase 5, catalytic subunit
mm9_v1_chr14_+_68334187_68334420	0.171523	HOX{A6,A7,B6,B7}.p2	AK087312|Kctd9|105440|potassium channel tetramerisation domain containing 9	AK166501|Kctd9|105440|potassium channel tetramerisation domain containing 9	BC011302|Kctd9|105440|potassium channel tetramerisation domain containing 9
mm9_v1_chr14_-_56290697_56290758	0.17113	HOX{A6,A7,B6,B7}.p2	D10918|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK147080|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	BC004625|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK146732|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	NM_008683|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8
mm9_v1_chr1_-_63160764_63160840	0.170952	HOX{A6,A7,B6,B7}.p2	AK049468|Ino80d|227195|INO80 complex subunit D	NM_001081436|Ino80d|227195|INO80 complex subunit D	NM_001114609|Ino80d|227195|INO80 complex subunit D
mm9_v1_chr11_-_47192793_47192803	0.170567	HOX{A6,A7,B6,B7}.p2	BC130019|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)	AK040974|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)	NM_011891|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm9_v1_chr1_-_88255804_88255941	0.170268	HOX{A6,A7,B6,B7}.p2	AK181817|Ncl|17975|nucleolin	AK215976|Ncl|17975|nucleolin	BC005460|Ncl|17975|nucleolin	BC012657|Ncl|17975|nucleolin	BC014285|Ncl|17975|nucleolin	AK168579|Ncl|17975|nucleolin	AK163275|Ncl|17975|nucleolin	AK011201|Ncl|17975|nucleolin	AK028681|Ncl|17975|nucleolin	AK029128|Ncl|17975|nucleolin	AK088402|Ncl|17975|nucleolin	AK144894|Ncl|17975|nucleolin	AK161597|Ncl|17975|nucleolin	AK165167|Ncl|17975|nucleolin	AK166681|Ncl|17975|nucleolin	AK168623|Ncl|17975|nucleolin	AF318184|Ncl|17975|nucleolin
mm9_v1_chr1_+_75371871_75371871	0.16946	HOX{A6,A7,B6,B7}.p2	AF215896|Speg|11790|SPEG complex locus	NM_007463|Speg|11790|SPEG complex locus
mm9_v1_chr13_-_55464135_55464143	0.168868	HOX{A6,A7,B6,B7}.p2	BC055327|Lman2|66890|lectin, mannose-binding 2	NM_025828|Lman2|66890|lectin, mannose-binding 2
mm9_v1_chrX_+_98624989_98625073	0.168813	HOX{A6,A7,B6,B7}.p2	NM_023144|Nono|53610|non-POU-domain-containing, octamer binding protein	AK161152|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169303|Nono|53610|non-POU-domain-containing, octamer binding protein	AK145179|Nono|53610|non-POU-domain-containing, octamer binding protein	AK028338|Nono|53610|non-POU-domain-containing, octamer binding protein	AK004830|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169202|Nono|53610|non-POU-domain-containing, octamer binding protein	AK165855|Nono|53610|non-POU-domain-containing, octamer binding protein	BC005465|Nono|53610|non-POU-domain-containing, octamer binding protein	S64860|Nono|53610|non-POU-domain-containing, octamer binding protein	AK167297|Nono|53610|non-POU-domain-containing, octamer binding protein	AK033201|Nono|53610|non-POU-domain-containing, octamer binding protein	AK013444|Nono|53610|non-POU-domain-containing, octamer binding protein
mm9_v1_chr8_+_67471046_67471202	0.168112	HOX{A6,A7,B6,B7}.p2	AK013998|Tmem192|73067|transmembrane protein 192	NM_001163747|Tmem192|73067|transmembrane protein 192	NM_028427|Tmem192|73067|transmembrane protein 192	AK168146|Tmem192|73067|transmembrane protein 192	AK046181|Tmem192|73067|transmembrane protein 192	AK132619|Tmem192|73067|transmembrane protein 192	BC020157|Tmem192|73067|transmembrane protein 192
mm9_v1_chr4_-_126002442_126002551	0.167886	HOX{A6,A7,B6,B7}.p2	AB027138|Tekt2|24084|tektin 2	NM_011902|Tekt2|24084|tektin 2	BC008140|Tekt2|24084|tektin 2
mm9_v1_chr4_-_49562400_49562417	0.167352	HOX{A6,A7,B6,B7}.p2	AK168997|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr17_+_49071906_49072030	0.16673	HOX{A6,A7,B6,B7}.p2	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr13_-_23712946_23712992	0.166273	HOX{A6,A7,B6,B7}.p2	AK049948|Hist1h2be|319179|histone cluster 1, H2be	NM_001177653|Hist1h2be|319179|histone cluster 1, H2be	AK030546|Hist1h2be|319179|histone cluster 1, H2be	NM_178194|Hist1h2be|319179|histone cluster 1, H2be
mm9_v1_chr13_+_12487614_12487700	0.166061	HOX{A6,A7,B6,B7}.p2	AK087792|Heatr1|217995|HEAT repeat containing 1	AK165890|Heatr1|217995|HEAT repeat containing 1	NM_144835|Heatr1|217995|HEAT repeat containing 1	AK044969|Heatr1|217995|HEAT repeat containing 1	AK172508|Heatr1|217995|HEAT repeat containing 1	AK143958|Heatr1|217995|HEAT repeat containing 1	AK163223|Heatr1|217995|HEAT repeat containing 1	AK165368|Heatr1|217995|HEAT repeat containing 1
mm9_v1_chr9_+_30234620_30234695	0.165972	HOX{A6,A7,B6,B7}.p2	AK163810|Snx19|102607|sorting nexin 19	AK122231|Snx19|102607|sorting nexin 19	BC051164|Snx19|102607|sorting nexin 19
mm9_v1_chr14_+_58417049_58417112	0.165523	HOX{A6,A7,B6,B7}.p2	AK144904|Sap18|20220|Sin3-associated polypeptide 18	AK146928|Sap18|20220|Sin3-associated polypeptide 18	NM_001142441|Gm10094|100041953|predicted gene 10094	BC006625|Sap18|20220|Sin3-associated polypeptide 18	AK006647|Sap18|20220|Sin3-associated polypeptide 18	AK085992|Sap18|20220|Sin3-associated polypeptide 18	Z97062|Sap18|20220|Sin3-associated polypeptide 18	BC099480|Sap18|20220|Sin3-associated polypeptide 18	AK133619|Sap18|20220|Sin3-associated polypeptide 18	AK005189|Sap18|20220|Sin3-associated polypeptide 18
mm9_v1_chr7_-_134005318_134005413	0.165512	HOX{A6,A7,B6,B7}.p2	AK135531|Ino80e|233875|INO80 complex subunit E	BC025527|Ino80e|233875|INO80 complex subunit E	AK040862|Ino80e|233875|INO80 complex subunit E
mm9_v1_chr12_+_79850007_79850054	0.165251	HOX{A6,A7,B6,B7}.p2	AF199008|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC138624|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr10_-_60215512_60215513	0.16428	HOX{A6,A7,B6,B7}.p2	BC137864|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	BC144983|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3
mm9_v1_chr3_+_94641626_94641643	0.163882	HOX{A6,A7,B6,B7}.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr5_+_20388263_20388316	0.163877	HOX{A6,A7,B6,B7}.p2	NM_177601|Tmem60|212090|transmembrane protein 60	AK041036|Tmem60|212090|transmembrane protein 60
mm9_v1_chr11_-_70043222_70043264	0.163185	HOX{A6,A7,B6,B7}.p2	AB011665|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	BC090998|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	AK156733|Bcl6b|12029|B-cell CLL/lymphoma 6, member B
mm9_v1_chr10_-_30562434_30562625	0.1628	HOX{A6,A7,B6,B7}.p2	AK031506|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AB093589|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103575|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105651|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC103576|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	BC105652|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF173902|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF232240|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AK158000|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AF172287|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	AJ271867|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2	NM_013904|Hey2|15214|hairy/enhancer-of-split related with YRPW motif 2
mm9_v1_chr6_-_113433154_113433156	0.162392	HOX{A6,A7,B6,B7}.p2	AK033890|Il17rc|171095|interleukin 17 receptor C	AK040950|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr11_+_75007300_75007314	0.162348	HOX{A6,A7,B6,B7}.p2	BC030471|Rtn4rl1|237847|reticulon 4 receptor-like 1
mm9_v1_chr10_-_86955909_86956078	0.162168	HOX{A6,A7,B6,B7}.p2	M95603|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	BC055748|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)
mm9_v1_chr11_+_83286587_83286623	0.162118	HOX{A6,A7,B6,B7}.p2	AK011843|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK078205|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK051568|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_027427|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK166550|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_-_103545641_103545788	0.162078	HOX{A6,A7,B6,B7}.p2	AK159746|Hipk1|15257|homeodomain interacting protein kinase 1	AK076611|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr12_-_119539840_119539861	0.161916	HOX{A6,A7,B6,B7}.p2	U62522|Sp4|20688|trans-acting transcription factor 4	BC076630|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr14_+_31362306_31362551	0.161117	HOX{A6,A7,B6,B7}.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chrX_-_133268136_133268249	0.160824	HOX{A6,A7,B6,B7}.p2	AK211563|Morf4l2|56397|mortality factor 4 like 2	AK211831|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr13_-_21902031_21902067	0.160521	HOX{A6,A7,B6,B7}.p2	BC115792|Hist1h2bj|319183|histone cluster 1, H2bj	BC011440|Hist1h2br|665622|histone cluster 1 H2br	AK036389|Hist1h2br|665622|histone cluster 1 H2br	NM_001097979|Hist1h2bq|665596|histone cluster 1, H2bq	NM_001110555|Hist1h2br|665622|histone cluster 1 H2br
mm9_v1_chr15_-_78685925_78685959	0.160405	HOX{A6,A7,B6,B7}.p2	BC027504|Lgals2|107753|lectin, galactose-binding, soluble 2	AK007364|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008607|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008423|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008636|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008648|Lgals2|107753|lectin, galactose-binding, soluble 2	NM_025622|Lgals2|107753|lectin, galactose-binding, soluble 2
mm9_v1_chr10_-_7382974_7383127	0.160206	HOX{A6,A7,B6,B7}.p2	BC040750|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	D38023|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	M60320|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	AK006162|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	BC058966|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	BC049613|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm9_v1_chr1_-_72258684_72258880	0.158381	HOX{A6,A7,B6,B7}.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr19_+_4878667_4878752	0.158116	HOX{A6,A7,B6,B7}.p2	NM_001168516|Zdhhc24|70605|zinc finger, DHHC domain containing 24	NM_027476|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK171568|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK170706|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK170233|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK172151|Zdhhc24|70605|zinc finger, DHHC domain containing 24	NM_001168517|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK047235|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK017737|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK028164|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK169337|Zdhhc24|70605|zinc finger, DHHC domain containing 24	AK043923|Zdhhc24|70605|zinc finger, DHHC domain containing 24	BC056621|Zdhhc24|70605|zinc finger, DHHC domain containing 24	BC071194|Zdhhc24|70605|zinc finger, DHHC domain containing 24
mm9_v1_chr11_+_102146273_102146324	0.158041	HOX{A6,A7,B6,B7}.p2	AK132118|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	NM_028076|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK157408|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	BC016187|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK008158|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2
mm9_v1_chr1_+_60237433_60237478	0.157915	HOX{A6,A7,B6,B7}.p2	NM_173444|Nbeal1|269198|neurobeachin like 1
mm9_v1_chrX_-_91457942_91457985	0.157843	HOX{A6,A7,B6,B7}.p2	BC036993|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AJ006587|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr12_-_88729144_88729282	0.15738	HOX{A6,A7,B6,B7}.p2	U27455|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	X95642|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK089019|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK008871|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK044917|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK159346|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	NM_011479|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	BC003227|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK057644|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2
mm9_v1_chr12_+_76409299_76409440	0.15689	HOX{A6,A7,B6,B7}.p2	AK166409|Rhoj|80837|ras homolog gene family, member J	AK166480|Rhoj|80837|ras homolog gene family, member J	NM_023275|Rhoj|80837|ras homolog gene family, member J	BC054464|Rhoj|80837|ras homolog gene family, member J	BC043719|Rhoj|80837|ras homolog gene family, member J	AK159385|Rhoj|80837|ras homolog gene family, member J	AB060651|Rhoj|80837|ras homolog gene family, member J	AK042583|Rhoj|80837|ras homolog gene family, member J	AK003482|Rhoj|80837|ras homolog gene family, member J	AK003490|Rhoj|80837|ras homolog gene family, member J	AK156619|Rhoj|80837|ras homolog gene family, member J	AK171636|Rhoj|80837|ras homolog gene family, member J	AK157518|Rhoj|80837|ras homolog gene family, member J	BC024626|Rhoj|80837|ras homolog gene family, member J	BC060193|Rhoj|80837|ras homolog gene family, member J	AK185821|Rhoj|80837|ras homolog gene family, member J	AF309564|Rhoj|80837|ras homolog gene family, member J
mm9_v1_chr2_-_132073389_132073439	0.156683	HOX{A6,A7,B6,B7}.p2	BC080755|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene
mm9_v1_chr2_-_155937623_155937702	0.156319	HOX{A6,A7,B6,B7}.p2	AK220288|Cpne1|266692|copine I	BC052473|Rbm12|75710|RNA binding motif protein 12	BC057554|Cpne1|266692|copine I	AK035014|Rbm12|75710|RNA binding motif protein 12	AK080772|Rbm12|75710|RNA binding motif protein 12	AF393215|Rbm12|75710|RNA binding motif protein 12	AF393216|Rbm12|75710|RNA binding motif protein 12	AK028882|Cpne1|266692|copine I	AK152323|Cpne1|266692|copine I	NM_029397|Rbm12|75710|RNA binding motif protein 12	NM_170588|Cpne1|266692|copine I	NM_170590|Cpne1|266692|copine I	NM_170598|Rbm12|75710|RNA binding motif protein 12
mm9_v1_chr18_-_35658485_35658600	0.156141	HOX{A6,A7,B6,B7}.p2	BC028488|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AJ297884|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AK170415|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016466|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016119|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	NM_030749|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm9_v1_chr5_-_136254107_136254254	0.156068	HOX{A6,A7,B6,B7}.p2	BC045148|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	AK005858|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	AK005599|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	AK161310|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	NM_029659|Styxl1|76571|serine/threonine/tyrosine interacting-like 1
mm9_v1_chr15_-_98558560_98558628	0.156058	HOX{A6,A7,B6,B7}.p2	BC021345|Fkbp11|66120|FK506 binding protein 11	BC037596|Fkbp11|66120|FK506 binding protein 11	AK019132|Fkbp11|66120|FK506 binding protein 11	BC002311|Fkbp11|66120|FK506 binding protein 11	BC022900|Fkbp11|66120|FK506 binding protein 11	AK007813|Fkbp11|66120|FK506 binding protein 11	AK003331|Fkbp11|66120|FK506 binding protein 11	NM_024169|Fkbp11|66120|FK506 binding protein 11
mm9_v1_chr2_+_103962925_103962966	0.155608	HOX{A6,A7,B6,B7}.p2	AK020874|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene	NM_026634|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene	AK006944|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene	BC048438|A930018P22Rik|68243|RIKEN cDNA A930018P22 gene
mm9_v1_chr6_-_106698941_106699030	0.1556	HOX{A6,A7,B6,B7}.p2	AK138923|Il5ra|16192|interleukin 5 receptor, alpha	D90205|Il5ra|16192|interleukin 5 receptor, alpha	NM_008370|Il5ra|16192|interleukin 5 receptor, alpha
mm9_v1_chr19_+_8893890_8893890	0.155161	HOX{A6,A7,B6,B7}.p2	NM_001081196|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr11_-_6171453_6171670	0.155073	HOX{A6,A7,B6,B7}.p2	AK003613|Tmed4|103694|transmembrane emp24 protein transport domain containing 4
mm9_v1_chr4_-_147278927_147279021	0.154803	HOX{A6,A7,B6,B7}.p2	NM_133201|Mfn2|170731|mitofusin 2
mm9_v1_chr16_+_90738780_90738808	0.15469	HOX{A6,A7,B6,B7}.p2	AY079153|Mrap|77037|melanocortin 2 receptor accessory protein	AY079154|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chrX_+_98469429_98469601	0.154275	HOX{A6,A7,B6,B7}.p2	BC090654|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)	NM_021521|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)
mm9_v1_chr18_-_78375872_78375910	0.15424	HOX{A6,A7,B6,B7}.p2	AF367359|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_001110273|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr7_-_134757946_134757946	0.154216	HOX{A6,A7,B6,B7}.p2	BC067053|Zfp629|320683|zinc finger protein 629	NM_177226|Zfp629|320683|zinc finger protein 629
mm9_v1_chr4_-_151526315_151526315	0.153477	HOX{A6,A7,B6,B7}.p2	AF239886|Espn|56226|espin	NM_207687|Espn|56226|espin
mm9_v1_chr10_+_74980789_74980840	0.152883	HOX{A6,A7,B6,B7}.p2	BC011510|Snrpd3|67332|small nuclear ribonucleoprotein D3
mm9_v1_chr12_-_57446800_57446880	0.15275	HOX{A6,A7,B6,B7}.p2	AK077125|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK154318|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK171164|Mbip|217588|MAP3K12 binding inhibitory protein 1	BC002277|Mbip|217588|MAP3K12 binding inhibitory protein 1	NM_145442|Mbip|217588|MAP3K12 binding inhibitory protein 1
mm9_v1_chr15_-_34372832_34373030	0.152728	HOX{A6,A7,B6,B7}.p2	BC092137|Rpl30|19946|ribosomal protein L30	BC069949|Rpl30|19946|ribosomal protein L30	BC086890|Rpl30|19946|ribosomal protein L30	AK002988|Rpl30|19946|ribosomal protein L30	AK137031|Rpl30|19946|ribosomal protein L30	BC086891|Rpl30|19946|ribosomal protein L30	BC100608|Rpl30|19946|ribosomal protein L30	NM_009083|Rpl30|19946|ribosomal protein L30	NM_001163485|Rpl30|19946|ribosomal protein L30
mm9_v1_chr5_+_88237145_88237179	0.152183	HOX{A6,A7,B6,B7}.p2	AK164767|Csn1s2b|12992|casein alpha s2-like B	AK085744|Csn1s2b|12992|casein alpha s2-like B	NM_009973|Csn1s2b|12992|casein alpha s2-like B	AK164763|Csn1s2b|12992|casein alpha s2-like B	AK021343|Csn1s2b|12992|casein alpha s2-like B	AK052780|Csn1s2b|12992|casein alpha s2-like B	AK052789|Csn1s2b|12992|casein alpha s2-like B	AK085747|Csn1s2b|12992|casein alpha s2-like B	AK164768|Csn1s2b|12992|casein alpha s2-like B	AK021337|Csn1s2b|12992|casein alpha s2-like B	AK164795|Csn1s2b|12992|casein alpha s2-like B	BC002084|Csn1s2b|12992|casein alpha s2-like B	J00379|Csn1s2b|12992|casein alpha s2-like B	V00740|Csn1s2b|12992|casein alpha s2-like B
mm9_v1_chr16_-_97985323_97985396	0.152031	HOX{A6,A7,B6,B7}.p2	BC057871|Ripk4|72388|receptor-interacting serine-threonine kinase 4	AK145203|Ripk4|72388|receptor-interacting serine-threonine kinase 4	AF302127|Ripk4|72388|receptor-interacting serine-threonine kinase 4	NM_023663|Ripk4|72388|receptor-interacting serine-threonine kinase 4	AK010133|Ripk4|72388|receptor-interacting serine-threonine kinase 4
mm9_v1_chr7_-_31377960_31377960	0.151863	HOX{A6,A7,B6,B7}.p2	NM_021397|Zbtb32|58206|zinc finger and BTB domain containing 32
mm9_v1_chr11_+_120459734_120459836	0.150718	HOX{A6,A7,B6,B7}.p2	NM_025389|Anapc11|66156|anaphase promoting complex subunit 11	AK158224|Anapc11|66156|anaphase promoting complex subunit 11	AK003612|Anapc11|66156|anaphase promoting complex subunit 11	AK045408|Anapc11|66156|anaphase promoting complex subunit 11	AK003244|Anapc11|66156|anaphase promoting complex subunit 11	AK136358|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr16_-_84735425_84735537	0.150606	HOX{A6,A7,B6,B7}.p2	BC012274|Mrpl39|27393|mitochondrial ribosomal protein L39	NM_017404|Mrpl39|27393|mitochondrial ribosomal protein L39	AF239728|Mrpl39|27393|mitochondrial ribosomal protein L39	AK031942|Mrpl39|27393|mitochondrial ribosomal protein L39	BC016561|Mrpl39|27393|mitochondrial ribosomal protein L39	BC036276|Mrpl39|27393|mitochondrial ribosomal protein L39	AK007681|Mrpl39|27393|mitochondrial ribosomal protein L39
mm9_v1_chr4_+_136833403_136833549	0.14941	HOX{A6,A7,B6,B7}.p2	AK012727|Wnt4|22417|wingless-related MMTV integration site 4	BC101962|Wnt4|22417|wingless-related MMTV integration site 4	BC103560|Wnt4|22417|wingless-related MMTV integration site 4	BC103561|Wnt4|22417|wingless-related MMTV integration site 4	BC103562|Wnt4|22417|wingless-related MMTV integration site 4	M89797|Wnt4|22417|wingless-related MMTV integration site 4	NM_009523|Wnt4|22417|wingless-related MMTV integration site 4
mm9_v1_chr19_-_6067723_6067866	0.14889	HOX{A6,A7,B6,B7}.p2	AF480070|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK039028|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK155475|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK014166|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK134512|Tm7sf2|73166|transmembrane 7 superfamily member 2	BC014769|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK037325|Tm7sf2|73166|transmembrane 7 superfamily member 2	NM_028454|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK040016|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK043687|Tm7sf2|73166|transmembrane 7 superfamily member 2
mm9_v1_chr15_+_10930475_10930567	0.148651	HOX{A6,A7,B6,B7}.p2	AK029155|Slc45a2|22293|solute carrier family 45, member 2	NM_053077|Slc45a2|22293|solute carrier family 45, member 2	AK148207|Slc45a2|22293|solute carrier family 45, member 2	BC125376|Slc45a2|22293|solute carrier family 45, member 2	BC132429|Slc45a2|22293|solute carrier family 45, member 2	AK089932|Slc45a2|22293|solute carrier family 45, member 2	AY034377|Slc45a2|22293|solute carrier family 45, member 2	AF360357|Slc45a2|22293|solute carrier family 45, member 2
mm9_v1_chr13_-_23515682_23515773	0.14864	HOX{A6,A7,B6,B7}.p2	AB021860|Abt1|30946|activator of basal transcription 1	AK019220|Abt1|30946|activator of basal transcription 1	AK019221|Abt1|30946|activator of basal transcription 1	BC082609|Abt1|30946|activator of basal transcription 1	AK009557|Abt1|30946|activator of basal transcription 1	AK029222|Abt1|30946|activator of basal transcription 1	NM_013924|Abt1|30946|activator of basal transcription 1
mm9_v1_chr4_+_99768392_99768410	0.148628	HOX{A6,A7,B6,B7}.p2	AK049369|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	NM_013845|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	BC138794|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	BC138810|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr16_+_32271553_32271694	0.147971	HOX{A6,A7,B6,B7}.p2	AK009281|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene	NM_183283|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene
mm9_v1_chr11_+_3964839_3964931	0.147896	HOX{A6,A7,B6,B7}.p2	NM_001029937|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC138982|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC138985|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC145485|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)
mm9_v1_chrX_+_10876382_10876382	0.14703	HOX{A6,A7,B6,B7}.p2	BC087913|Gm14483|100042922|predicted gene 14483	NM_001111037|Gm14483|100042922|predicted gene 14483
mm9_v1_chr2_-_148233853_148233923	0.146491	HOX{A6,A7,B6,B7}.p2	AK044928|Thbd|21824|thrombomodulin	AK089479|Thbd|21824|thrombomodulin	NM_009378|Thbd|21824|thrombomodulin
mm9_v1_chr7_-_22813915_22813915	0.146074	HOX{A6,A7,B6,B7}.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr7_+_4289325_4289370	0.144867	HOX{A6,A7,B6,B7}.p2	AK079401|Ncr1|17086|natural cytotoxicity triggering receptor 1	BC115364|Ncr1|17086|natural cytotoxicity triggering receptor 1	NM_010746|Ncr1|17086|natural cytotoxicity triggering receptor 1	AJ223765|Ncr1|17086|natural cytotoxicity triggering receptor 1	BC042788|Ncr1|17086|natural cytotoxicity triggering receptor 1	AK172251|Ncr1|17086|natural cytotoxicity triggering receptor 1
mm9_v1_chr6_+_64992810_64992853	0.144451	HOX{A6,A7,B6,B7}.p2	AK134442|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK011724|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK122454|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr17_-_27889845_27889920	0.144352	HOX{A6,A7,B6,B7}.p2	AK081219|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	AK082788|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed
mm9_v1_chr6_+_83299439_83299497	0.144211	HOX{A6,A7,B6,B7}.p2	BC116947|Bola3|78653|bolA-like 3 (E. coli)	BC116949|Bola3|78653|bolA-like 3 (E. coli)	AK131950|Bola3|78653|bolA-like 3 (E. coli)	AK160488|Bola3|78653|bolA-like 3 (E. coli)	AK028102|Bola3|78653|bolA-like 3 (E. coli)	NM_175277|Bola3|78653|bolA-like 3 (E. coli)
mm9_v1_chrX_-_140261954_140261960	0.144094	HOX{A6,A7,B6,B7}.p2	NM_007603|Capn6|12338|calpain 6	AK145116|Capn6|12338|calpain 6
mm9_v1_chr2_-_153051118_153051176	0.143905	HOX{A6,A7,B6,B7}.p2	BC058340|Tspyl3|241732|TSPY-like 3	AK148882|Tspyl3|241732|TSPY-like 3	AK167722|Tspyl3|241732|TSPY-like 3	AK134522|Tspyl3|241732|TSPY-like 3	NM_198617|Tspyl3|241732|TSPY-like 3
mm9_v1_chr8_+_109867910_109868036	0.143878	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr7_-_35048648_35048654	0.143747	HOX{A6,A7,B6,B7}.p2	AK129125|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr9_+_99512920_99512920	0.14366	HOX{A6,A7,B6,B7}.p2	AK136425|A4gnt|333424|alpha-1,4-N-acetylglucosaminyltransferase	NM_001077424|A4gnt|333424|alpha-1,4-N-acetylglucosaminyltransferase
mm9_v1_chr11_+_116532973_116533009	0.143418	HOX{A6,A7,B6,B7}.p2	AK007675|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK013681|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK037979|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	BC055707|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK088915|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene
mm9_v1_chr18_-_42421635_42421796	0.142658	HOX{A6,A7,B6,B7}.p2	AK166827|Lars|107045|leucyl-tRNA synthetase	AK129337|Lars|107045|leucyl-tRNA synthetase	BC052715|Lars|107045|leucyl-tRNA synthetase	NM_134137|Lars|107045|leucyl-tRNA synthetase	AK009823|Lars|107045|leucyl-tRNA synthetase	AK010041|Lars|107045|leucyl-tRNA synthetase
mm9_v1_chr2_-_130985746_130985825	0.142425	HOX{A6,A7,B6,B7}.p2	AK003406|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	NM_026091|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	BC071212|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene	AK006622|1700037H04Rik|67326|RIKEN cDNA 1700037H04 gene
mm9_v1_chr11_-_77997042_77997098	0.142121	HOX{A6,A7,B6,B7}.p2	BC026656|Rpl23a|268449|ribosomal protein L23A	BC096637|Rpl23a|268449|ribosomal protein L23A	AF452721|Rpl23a|268449|ribosomal protein L23A	BC029892|Rpl23a|268449|ribosomal protein L23A	AK028387|Rpl23a|268449|ribosomal protein L23A	AK152095|Rpl23a|268449|ribosomal protein L23A	BC086884|Rpl23a|268449|ribosomal protein L23A	BC086883|Rpl23a|268449|ribosomal protein L23A	BC125640|Rpl23a|268449|ribosomal protein L23A	BC125642|Rpl23a|268449|ribosomal protein L23A	NM_207523|Rpl23a|268449|ribosomal protein L23A
mm9_v1_chr15_-_97817202_97817217	0.141347	HOX{A6,A7,B6,B7}.p2	AK028295|Col2a1|12824|collagen, type II, alpha 1
mm9_v1_chrX_-_98615554_98615567	0.140796	HOX{A6,A7,B6,B7}.p2	AK082075|Zmym3|56364|zinc finger, MYM-type 3	NM_001177988|Zmym3|56364|zinc finger, MYM-type 3	NM_019831|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr17_-_32524703_32524761	0.139135	HOX{A6,A7,B6,B7}.p2	AB255388|Wiz|22404|widely-interspaced zinc finger motifs	NM_212438|Wiz|22404|widely-interspaced zinc finger motifs
mm9_v1_chrX_+_23270168_23270195	0.138865	HOX{A6,A7,B6,B7}.p2	AK041211|Wdr44|72404|WD repeat domain 44
mm9_v1_chr6_-_112897259_112897274	0.138751	HOX{A6,A7,B6,B7}.p2	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr15_+_8059306_8059370	0.138698	HOX{A6,A7,B6,B7}.p2	NM_133227|Nup155|170762|nucleoporin 155	AK044109|Nup155|170762|nucleoporin 155	AF322375|Nup155|170762|nucleoporin 155	AK045334|Nup155|170762|nucleoporin 155	AK145717|Nup155|170762|nucleoporin 155	AK086426|Nup155|170762|nucleoporin 155	AK036575|Nup155|170762|nucleoporin 155	AK129217|Nup155|170762|nucleoporin 155	BC050919|Nup155|170762|nucleoporin 155
mm9_v1_chr5_+_52581905_52581999	0.138341	HOX{A6,A7,B6,B7}.p2	AK163067|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene	AK136375|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene	AK079034|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene	AK050940|9230114K14Rik|414108|RIKEN cDNA 9230114K14 gene
mm9_v1_chr19_-_5758532_5758585	0.138212	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_-_98054597_98054606	0.138168	HOX{A6,A7,B6,B7}.p2	AK049203|Med1|19014|mediator complex subunit 1	AK054437|Med1|19014|mediator complex subunit 1	NM_001080118|Med1|19014|mediator complex subunit 1	NM_134027|Med1|19014|mediator complex subunit 1
mm9_v1_chr7_-_107007401_107007437	0.138022	HOX{A6,A7,B6,B7}.p2	AK077510|Spcs2|66624|signal peptidase complex subunit 2 homolog (S. cerevisiae)	BC050150|Spcs2|66624|signal peptidase complex subunit 2 homolog (S. cerevisiae)	AK014310|Spcs2|66624|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm9_v1_chr7_-_52147751_52147803	0.137609	HOX{A6,A7,B6,B7}.p2	AK090026|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK158238|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	BC071206|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK149867|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK165760|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	BC031138|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK148368|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm9_v1_chr1_+_74708306_74708411	0.137443	HOX{A6,A7,B6,B7}.p2	BC085151|Ttll4|67534|tubulin tyrosine ligase-like family, member 4	NM_001014974|Ttll4|67534|tubulin tyrosine ligase-like family, member 4
mm9_v1_chr1_-_184271729_184271762	0.137324	HOX{A6,A7,B6,B7}.p2	BC094542|Fbxo28|67948|F-box protein 28	NM_175127|Fbxo28|67948|F-box protein 28	AK076211|Fbxo28|67948|F-box protein 28	AK077653|Fbxo28|67948|F-box protein 28
mm9_v1_chr3_+_95733163_95733182	0.13702	HOX{A6,A7,B6,B7}.p2	AK172146|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	NM_023210|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr1_+_83113340_83113380	0.136993	HOX{A6,A7,B6,B7}.p2	AK079862|Ccl20|20297|chemokine (C-C motif) ligand 20	NM_001159738|Ccl20|20297|chemokine (C-C motif) ligand 20	NM_016960|Ccl20|20297|chemokine (C-C motif) ligand 20	AB015136|Ccl20|20297|chemokine (C-C motif) ligand 20	AF053313|Ccl20|20297|chemokine (C-C motif) ligand 20	AF099052|Ccl20|20297|chemokine (C-C motif) ligand 20	BC028504|Ccl20|20297|chemokine (C-C motif) ligand 20	AJ222694|Ccl20|20297|chemokine (C-C motif) ligand 20
mm9_v1_chr4_-_14753720_14753733	0.136704	HOX{A6,A7,B6,B7}.p2	NM_152812|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr12_+_85758189_85758266	0.136581	HOX{A6,A7,B6,B7}.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr11_-_45768992_45769003	0.136356	HOX{A6,A7,B6,B7}.p2	BC115560|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC115561|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK010876|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_001080969|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr17_-_24607134_24607257	0.136228	HOX{A6,A7,B6,B7}.p2	AK014798|4833447I15Rik|74844|RIKEN cDNA 4833447I15 gene	AK077014|E4f1|13560|E4F transcription factor 1
mm9_v1_chr2_+_90780646_90780662	0.135779	HOX{A6,A7,B6,B7}.p2	AK143698|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr7_-_21288567_21288567	0.135411	HOX{A6,A7,B6,B7}.p2	NM_001167154|Gm8693|667543|predicted gene 8693	NM_001167155|Gm4144|100042980|predicted gene 4144
mm9_v1_chr14_+_48740495_48740543	0.135328	HOX{A6,A7,B6,B7}.p2	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
mm9_v1_chr8_-_87364463_87364577	0.135235	HOX{A6,A7,B6,B7}.p2	X92410|Rad23a|19358|RAD23a homolog (S. cerevisiae)	BC138684|Rad23a|19358|RAD23a homolog (S. cerevisiae)	BC145372|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK009733|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK038300|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK161875|Rad23a|19358|RAD23a homolog (S. cerevisiae)	NM_009010|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK045224|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK165467|Rad23a|19358|RAD23a homolog (S. cerevisiae)
mm9_v1_chrX_+_23270202_23270284	0.134588	HOX{A6,A7,B6,B7}.p2	AK049071|Wdr44|72404|WD repeat domain 44	AK088885|Wdr44|72404|WD repeat domain 44	BC068151|Wdr44|72404|WD repeat domain 44	NM_175180|Wdr44|72404|WD repeat domain 44	BC049191|Wdr44|72404|WD repeat domain 44	AK011669|Wdr44|72404|WD repeat domain 44
mm9_v1_chr4_+_33219530_33219530	0.134569	HOX{A6,A7,B6,B7}.p2	AF024620|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1	NM_008075|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1
mm9_v1_chr19_+_46576203_46576224	0.134223	HOX{A6,A7,B6,B7}.p2	BC029283|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr2_-_132078946_132078953	0.133838	HOX{A6,A7,B6,B7}.p2	AK151411|Pcna|18538|proliferating cell nuclear antigen
mm9_v1_chr13_-_60278447_60278547	0.133568	HOX{A6,A7,B6,B7}.p2	BC055747|Gas1|14451|growth arrest specific 1
mm9_v1_chr3_+_136333793_136333805	0.133392	HOX{A6,A7,B6,B7}.p2	BC096652|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr1_-_72921098_72921102	0.133231	HOX{A6,A7,B6,B7}.p2	L12447|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chrX_-_99266499_99266645	0.13249	HOX{A6,A7,B6,B7}.p2	BC132391|Rgag4|331474|retrotransposon gag domain containing 4	BC137795|Rgag4|331474|retrotransposon gag domain containing 4	AK032151|Rgag4|331474|retrotransposon gag domain containing 4	AK220436|Rgag4|331474|retrotransposon gag domain containing 4	NM_183318|Rgag4|331474|retrotransposon gag domain containing 4
mm9_v1_chr4_+_111392628_111392648	0.132247	HOX{A6,A7,B6,B7}.p2	AK132771|Spata6|67946|spermatogenesis associated 6	AK053170|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr3_+_121234528_121234590	0.13212	HOX{A6,A7,B6,B7}.p2	AK040725|A530020G20Rik|319839|RIKEN cDNA A530020G20 gene	AK040960|A530020G20Rik|319839|RIKEN cDNA A530020G20 gene
mm9_v1_chr11_+_29426434_29426502	0.131945	HOX{A6,A7,B6,B7}.p2	AK136344|Mtif2|76784|mitochondrial translational initiation factor 2	AK160724|Mtif2|76784|mitochondrial translational initiation factor 2	AK019087|Mtif2|76784|mitochondrial translational initiation factor 2	AK010766|Mtif2|76784|mitochondrial translational initiation factor 2	AK146961|Mtif2|76784|mitochondrial translational initiation factor 2	NM_133767|Mtif2|76784|mitochondrial translational initiation factor 2	BC016590|Mtif2|76784|mitochondrial translational initiation factor 2	BC066819|Mtif2|76784|mitochondrial translational initiation factor 2
mm9_v1_chr17_-_37095181_37095245	0.1319	HOX{A6,A7,B6,B7}.p2	AF230339|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr11_-_115397455_115397592	0.131619	HOX{A6,A7,B6,B7}.p2	BC083326|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK085238|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	BC017522|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	BC095930|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	L79948|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK132213|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK012619|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	NM_133354|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK167308|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK160404|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK160418|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)
mm9_v1_chr11_-_65981945_65982052	0.131547	HOX{A6,A7,B6,B7}.p2	AK082443|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK030981|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK044263|Dnahc9|237806|dynein, axonemal, heavy chain 9	NM_001099633|Dnahc9|237806|dynein, axonemal, heavy chain 9
mm9_v1_chr1_+_75233043_75233043	0.131379	HOX{A6,A7,B6,B7}.p2	BC011090|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr17_+_46565890_46565899	0.131333	HOX{A6,A7,B6,B7}.p2	AF367970|Crip3|114570|cysteine-rich protein 3	AF367971|Crip3|114570|cysteine-rich protein 3	BC116360|Crip3|114570|cysteine-rich protein 3	BC116361|Crip3|114570|cysteine-rich protein 3	NM_053250|Crip3|114570|cysteine-rich protein 3	NM_181664|Crip3|114570|cysteine-rich protein 3	AK080272|Crip3|114570|cysteine-rich protein 3	AY555745|Crip3|114570|cysteine-rich protein 3
mm9_v1_chr12_+_81891598_81891755	0.13084	HOX{A6,A7,B6,B7}.p2	AK129100|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chrX_+_7184223_7184271	0.130798	HOX{A6,A7,B6,B7}.p2	BC057653|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	NM_019582|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	AF192497|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	AK044695|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	BC051413|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	BC043482|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	AJ579852|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit
mm9_v1_chr1_-_109174947_109174947	0.13063	HOX{A6,A7,B6,B7}.p2	AK003650|Serpinb3c|381286|serine (or cysteine) peptidase inhibitor, clade B, member 3C	NM_201363|Serpinb3c|381286|serine (or cysteine) peptidase inhibitor, clade B, member 3C
mm9_v1_chr13_+_22036962_22036998	0.130578	HOX{A6,A7,B6,B7}.p2	BC053084|Zfp184|193452|zinc finger protein 184 (Kruppel-like)	NM_183014|Zfp184|193452|zinc finger protein 184 (Kruppel-like)	AK036164|Zfp184|193452|zinc finger protein 184 (Kruppel-like)
mm9_v1_chr2_+_156393681_156393681	0.13041	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr10_-_6980199_6980474	0.130324	HOX{A6,A7,B6,B7}.p2	AK042973|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	NM_133485|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AK047607|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AK085997|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c	AF407167|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr3_+_128916849_128916891	0.130301	HOX{A6,A7,B6,B7}.p2	AK034846|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_001042502|Pitx2|18741|paired-like homeodomain transcription factor 2	AF048724|Pitx2|18741|paired-like homeodomain transcription factor 2	AJ243597|Pitx2|18741|paired-like homeodomain transcription factor 2
mm9_v1_chr16_+_20672890_20672931	0.130048	HOX{A6,A7,B6,B7}.p2	AK150050|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066103|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC079675|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr6_-_58385838_58385887	0.130015	HOX{A6,A7,B6,B7}.p2	NM_134177|Vmn1r30|171195|vomeronasal 1 receptor 30	BC138075|Vmn1r30|171195|vomeronasal 1 receptor 30	BC138078|Vmn1r30|171195|vomeronasal 1 receptor 30
mm9_v1_chr2_+_32426348_32426407	0.129718	HOX{A6,A7,B6,B7}.p2	BC008256|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	NM_010073|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AK002468|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AK086634|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AK004241|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AB013360|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2
mm9_v1_chr12_+_101350539_101350540	0.129704	HOX{A6,A7,B6,B7}.p2	U39302|Psmc1|19179|protease (prosome, macropain) 26S subunit, ATPase 1	NM_008947|Psmc1|19179|protease (prosome, macropain) 26S subunit, ATPase 1
mm9_v1_chr19_-_41281263_41281324	0.128654	HOX{A6,A7,B6,B7}.p2	BC132537|Tll2|24087|tolloid-like 2	BC145132|Tll2|24087|tolloid-like 2	NM_011904|Tll2|24087|tolloid-like 2	AF073526|Tll2|24087|tolloid-like 2
mm9_v1_chr1_-_172797866_172797977	0.128096	HOX{A6,A7,B6,B7}.p2	AK020270|Atf6|226641|activating transcription factor 6	AK087000|Atf6|226641|activating transcription factor 6	AK036106|Atf6|226641|activating transcription factor 6	BC141028|Atf6|226641|activating transcription factor 6	AK036335|Atf6|226641|activating transcription factor 6	NM_001081304|Atf6|226641|activating transcription factor 6
mm9_v1_chr5_+_93327023_93327086	0.127679	HOX{A6,A7,B6,B7}.p2	NM_001077596|Shroom3|27428|shroom family member 3	AK147493|Shroom3|27428|shroom family member 3
mm9_v1_chr8_+_113406022_113406076	0.127541	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr3_+_88425294_88425344	0.127512	HOX{A6,A7,B6,B7}.p2	NM_001198912|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	NM_001198913|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr1_-_181734145_181734145	0.127432	HOX{A6,A7,B6,B7}.p2	NM_026375|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr4_+_49072327_49072465	0.127129	HOX{A6,A7,B6,B7}.p2	AK053451|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK087514|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AY345342|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	NM_178756|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	BC096762|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK047614|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK043762|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene
mm9_v1_chr2_-_4544898_4544915	0.126938	HOX{A6,A7,B6,B7}.p2	BC019370|Prpf18|67229|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm9_v1_chr13_-_35011860_35011863	0.126645	HOX{A6,A7,B6,B7}.p2	NM_027967|1700026J04Rik|71864|RIKEN cDNA 1700026J04 gene	AK139828|1700026J04Rik|71864|RIKEN cDNA 1700026J04 gene
mm9_v1_chr14_-_21212709_21212791	0.125911	HOX{A6,A7,B6,B7}.p2	AK019243|Mrps16|66242|mitochondrial ribosomal protein S16	BC024656|Mrps16|66242|mitochondrial ribosomal protein S16	AK005206|Mrps16|66242|mitochondrial ribosomal protein S16	NM_025440|Mrps16|66242|mitochondrial ribosomal protein S16
mm9_v1_chr2_+_74549973_74550049	0.125559	HOX{A6,A7,B6,B7}.p2	AK138525|Hoxd3|15434|homeobox D3	AK164120|1700109F18Rik|73429|RIKEN cDNA 1700109F18 gene	NM_010468|Hoxd3|15434|homeobox D3
mm9_v1_chr11_-_106649652_106649810	0.124429	HOX{A6,A7,B6,B7}.p2	BC108369|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK203495|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129873|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129874|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC086320|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC046554|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	X65627|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC062916|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK044792|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK076018|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK088887|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK129022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK135173|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK166045|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	NM_007840|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr16_-_87496048_87496148	0.124354	HOX{A6,A7,B6,B7}.p2	BC009007|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK168465|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK172867|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145661|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145754|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK075711|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK075880|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK159969|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK147038|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	NM_009840|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK010882|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145918|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	Z37164|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)
mm9_v1_chr7_-_107731579_107731643	0.124173	HOX{A6,A7,B6,B7}.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr6_+_38553293_38553312	0.123769	HOX{A6,A7,B6,B7}.p2	AK138070|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr4_-_106850812_106850984	0.123741	HOX{A6,A7,B6,B7}.p2	AK008694|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	BC028321|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	AK011991|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	AK008715|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	NM_025617|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene
mm9_v1_chr7_-_123586905_123586945	0.123155	HOX{A6,A7,B6,B7}.p2	AK142284|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK013614|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr14_+_58417025_58417046	0.122295	HOX{A6,A7,B6,B7}.p2	NM_009119|Sap18|20220|Sin3-associated polypeptide 18
mm9_v1_chr5_+_122734363_122734418	0.122208	HOX{A6,A7,B6,B7}.p2	AK135118|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK083481|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK078914|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	BC068149|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_177242|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)
mm9_v1_chr4_-_43013187_43013207	0.121868	HOX{A6,A7,B6,B7}.p2	Z14044|Vcp|269523|valosin containing protein	AK160889|Vcp|269523|valosin containing protein	AK030751|Vcp|269523|valosin containing protein
mm9_v1_chr3_+_51219882_51219968	0.121405	HOX{A6,A7,B6,B7}.p2	NM_053089|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr7_-_3581429_3581535	0.121073	HOX{A6,A7,B6,B7}.p2	BC024356|Tfpt|69714|TCF3 (E2A) fusion partner	AF267988|Tfpt|69714|TCF3 (E2A) fusion partner	NM_023524|Tfpt|69714|TCF3 (E2A) fusion partner	AK155925|Tfpt|69714|TCF3 (E2A) fusion partner
mm9_v1_chr12_-_103981869_103981884	0.120503	HOX{A6,A7,B6,B7}.p2	NM_001142937|Moap1|64113|modulator of apoptosis 1	NM_022323|Moap1|64113|modulator of apoptosis 1
mm9_v1_chr11_-_113612629_113612637	0.119781	HOX{A6,A7,B6,B7}.p2	AB035088|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr4_+_140857147_140857182	0.118795	HOX{A6,A7,B6,B7}.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr4_-_133810011_133810020	0.118684	HOX{A6,A7,B6,B7}.p2	AK012898|Grrp1|72690|glycine/arginine rich protein 1	BC048704|Grrp1|72690|glycine/arginine rich protein 1	NM_001099296|Grrp1|72690|glycine/arginine rich protein 1
mm9_v1_chr1_-_121545158_121545240	0.118399	HOX{A6,A7,B6,B7}.p2	BC003937|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chrY_+_1855008_1855008	0.118096	HOX{A6,A7,B6,B7}.p2	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr4_+_138433841_138433860	0.117991	HOX{A6,A7,B6,B7}.p2	AK148187|Pla2g2e|26970|phospholipase A2, group IIE	AF112984|Pla2g2e|26970|phospholipase A2, group IIE	NM_012044|Pla2g2e|26970|phospholipase A2, group IIE	AF166098|Pla2g2e|26970|phospholipase A2, group IIE
mm9_v1_chr6_+_72253241_72253241	0.117985	HOX{A6,A7,B6,B7}.p2	NM_147779|Sftpb|20388|surfactant associated protein B
mm9_v1_chr7_+_91040481_91040625	0.117255	HOX{A6,A7,B6,B7}.p2	NM_023403|Mesdc2|67943|mesoderm development candidate 2
mm9_v1_chr18_-_46901117_46901234	0.117255	HOX{A6,A7,B6,B7}.p2	BC070470|Atg12|67526|autophagy-related 12 (yeast)	AB066216|Atg12|67526|autophagy-related 12 (yeast)	AK167027|Atg12|67526|autophagy-related 12 (yeast)	AK008698|Atg12|67526|autophagy-related 12 (yeast)	AK016474|Atg12|67526|autophagy-related 12 (yeast)	AK039278|Atg12|67526|autophagy-related 12 (yeast)	AK039546|Atg12|67526|autophagy-related 12 (yeast)	AK005405|Atg12|67526|autophagy-related 12 (yeast)	NM_026217|Atg12|67526|autophagy-related 12 (yeast)
mm9_v1_chr14_-_55545586_55545624	0.116661	HOX{A6,A7,B6,B7}.p2	NM_010112|Efs|13644|embryonal Fyn-associated substrate
mm9_v1_chr6_+_17586971_17587041	0.116599	HOX{A6,A7,B6,B7}.p2	U16741|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK150751|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK031551|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr12_-_32244833_32244833	0.116533	HOX{A6,A7,B6,B7}.p2	AF167411|Slc26a4|23985|solute carrier family 26, member 4	NM_011867|Slc26a4|23985|solute carrier family 26, member 4
mm9_v1_chr7_+_91040751_91040937	0.116527	HOX{A6,A7,B6,B7}.p2	AK031949|Mesdc2|67943|mesoderm development candidate 2	AK076760|Mesdc2|67943|mesoderm development candidate 2	AK172009|Mesdc2|67943|mesoderm development candidate 2	AK076773|Mesdc2|67943|mesoderm development candidate 2	AK008735|Mesdc2|67943|mesoderm development candidate 2	BC014742|Mesdc2|67943|mesoderm development candidate 2	AK204742|Mesdc2|67943|mesoderm development candidate 2
mm9_v1_chr10_+_22364816_22364969	0.116187	HOX{A6,A7,B6,B7}.p2	AJ549317|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	NM_178934|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK143263|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK028970|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC096454|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK031659|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AY230881|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK035972|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC116315|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC116314|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC138316|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC138317|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12
mm9_v1_chr18_+_56591785_56591811	0.115886	HOX{A6,A7,B6,B7}.p2	NM_026240|Gramd3|107022|GRAM domain containing 3	AK018691|Gramd3|107022|GRAM domain containing 3	AK164050|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr4_-_71861756_71861911	0.115733	HOX{A6,A7,B6,B7}.p2	BC057573|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)	AK048515|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)	AK082499|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)	AK046402|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)	AY155196|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm9_v1_chr3_-_68808386_68808491	0.11566	HOX{A6,A7,B6,B7}.p2	BC034101|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK042231|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK129339|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK147305|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	NM_026641|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)
mm9_v1_chr6_-_87300891_87300908	0.115631	HOX{A6,A7,B6,B7}.p2	BC099446|Gkn1|66283|gastrokine 1	BC132540|Gkn1|66283|gastrokine 1	BC132542|Gkn1|66283|gastrokine 1	AK008640|Gkn1|66283|gastrokine 1	AK008647|Gkn1|66283|gastrokine 1	AK008722|Gkn1|66283|gastrokine 1	AK008956|Gkn1|66283|gastrokine 1	AK009145|Gkn1|66283|gastrokine 1	AK028136|Gkn1|66283|gastrokine 1	AK008622|Gkn1|66283|gastrokine 1	AK008641|Gkn1|66283|gastrokine 1	AK008745|Gkn1|66283|gastrokine 1	AK008933|Gkn1|66283|gastrokine 1	AK008990|Gkn1|66283|gastrokine 1	AK019050|Gkn1|66283|gastrokine 1	AY456960|Gkn1|66283|gastrokine 1	NM_025466|Gkn1|66283|gastrokine 1
mm9_v1_chr6_+_133055256_133055343	0.115234	HOX{A6,A7,B6,B7}.p2	BC053418|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	NM_001163445|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK031684|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK077261|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK076076|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK050460|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK170805|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK005205|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene
mm9_v1_chr7_-_52147628_52147748	0.115036	HOX{A6,A7,B6,B7}.p2	AK209813|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK089940|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	NM_029365|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm9_v1_chr17_+_47873941_47874206	0.114401	HOX{A6,A7,B6,B7}.p2	NM_001161722|Tcfeb|21425|transcription factor EB	AK078755|Tcfeb|21425|transcription factor EB
mm9_v1_chr7_-_16859040_16859040	0.11404	HOX{A6,A7,B6,B7}.p2	NM_001136270|Prr24|66300|proline rich 24
mm9_v1_chr18_-_56721902_56721984	0.114031	HOX{A6,A7,B6,B7}.p2	BC012407|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1	NM_138600|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chrX_+_42444080_42444121	0.113438	HOX{A6,A7,B6,B7}.p2	BC060289|1110059M19Rik|68800|RIKEN cDNA 1110059M19 gene	NM_026841|1110059M19Rik|68800|RIKEN cDNA 1110059M19 gene	BC094615|1110059M19Rik|68800|RIKEN cDNA 1110059M19 gene
mm9_v1_chr2_+_30271550_30271576	0.113097	HOX{A6,A7,B6,B7}.p2	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr11_+_96891270_96891328	0.112665	HOX{A6,A7,B6,B7}.p2	AK075869|Scrn2|217140|secernin 2	BC021346|Scrn2|217140|secernin 2	BC010784|Scrn2|217140|secernin 2
mm9_v1_chr7_+_22617369_22617369	0.112319	HOX{A6,A7,B6,B7}.p2	NM_001166747|Vmn1r135|667404|vomeronasal 1 receptor 135	NM_001166755|Vmn1r163|667586|vomeronasal 1 receptor 163
mm9_v1_chr11_-_98190774_98191090	0.112079	HOX{A6,A7,B6,B7}.p2	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr3_-_90195440_90195485	0.111826	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr11_+_3189157_3189283	0.111234	HOX{A6,A7,B6,B7}.p2	AK018372|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC055947|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr5_+_100408033_100408079	0.111147	HOX{A6,A7,B6,B7}.p2	AK015886|4930524J08Rik|75129|RIKEN cDNA 4930524J08 gene
mm9_v1_chr2_+_90780665_90780699	0.110956	HOX{A6,A7,B6,B7}.p2	BC021393|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr11_-_86900220_86900252	0.110516	HOX{A6,A7,B6,B7}.p2	AK031106|1200011M11Rik|74133|RIKEN cDNA 1200011M11 gene
mm9_v1_chr11_+_88835235_88835270	0.110461	HOX{A6,A7,B6,B7}.p2	NM_016706|Coil|12812|coilin	AK146366|Coil|12812|coilin	AF208663|Coil|12812|coilin
mm9_v1_chr9_-_21564742_21564759	0.110204	HOX{A6,A7,B6,B7}.p2	AK153185|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK011728|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK167877|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr14_+_120674886_120674908	0.109613	HOX{A6,A7,B6,B7}.p2	NM_175341|Mbnl2|105559|muscleblind-like 2	NM_207515|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr7_-_30954705_30954770	0.109284	HOX{A6,A7,B6,B7}.p2	AJ224763|Zfp146|26465|zinc finger protein 146	AK047696|Zfp146|26465|zinc finger protein 146	NM_011980|Zfp146|26465|zinc finger protein 146	AK037311|Zfp146|26465|zinc finger protein 146
mm9_v1_chr10_+_127774872_127774973	0.108317	HOX{A6,A7,B6,B7}.p2	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr2_-_152169650_152169795	0.10825	HOX{A6,A7,B6,B7}.p2	AK146421|Trib3|228775|tribbles homolog 3 (Drosophila)	AK089931|Trib3|228775|tribbles homolog 3 (Drosophila)	AK144752|Trib3|228775|tribbles homolog 3 (Drosophila)	AJ514260|Trib3|228775|tribbles homolog 3 (Drosophila)	AK146340|Trib3|228775|tribbles homolog 3 (Drosophila)	AK132257|Trib3|228775|tribbles homolog 3 (Drosophila)	AK159760|Trib3|228775|tribbles homolog 3 (Drosophila)	AF358868|Trib3|228775|tribbles homolog 3 (Drosophila)	BC012955|Trib3|228775|tribbles homolog 3 (Drosophila)	AK160099|Trib3|228775|tribbles homolog 3 (Drosophila)	NM_175093|Trib3|228775|tribbles homolog 3 (Drosophila)
mm9_v1_chr8_+_87213145_87213176	0.107993	HOX{A6,A7,B6,B7}.p2	NM_001164559|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_001164560|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_198020|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	BC027404|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr18_+_12287232_12287358	0.107971	HOX{A6,A7,B6,B7}.p2	AK167309|Riok3|66878|RIO kinase 3 (yeast)	AK004748|Riok3|66878|RIO kinase 3 (yeast)	AK134327|Riok3|66878|RIO kinase 3 (yeast)	AK170882|Riok3|66878|RIO kinase 3 (yeast)	AK054308|Riok3|66878|RIO kinase 3 (yeast)	BC033271|Riok3|66878|RIO kinase 3 (yeast)	AK131635|Riok3|66878|RIO kinase 3 (yeast)	AK147074|Riok3|66878|RIO kinase 3 (yeast)	NM_024182|Riok3|66878|RIO kinase 3 (yeast)
mm9_v1_chr2_+_103867951_103868054	0.107882	HOX{A6,A7,B6,B7}.p2	NM_020593|Fbxo3|57443|F-box protein 3	NM_212433|Fbxo3|57443|F-box protein 3	AK028048|Fbxo3|57443|F-box protein 3	AK031428|Fbxo3|57443|F-box protein 3	AK049870|Fbxo3|57443|F-box protein 3	BC058253|Fbxo3|57443|F-box protein 3	AK085686|Fbxo3|57443|F-box protein 3	BC050758|Fbxo3|57443|F-box protein 3	AK004544|Fbxo3|57443|F-box protein 3	AK050195|Fbxo3|57443|F-box protein 3	AK150097|Fbxo3|57443|F-box protein 3	AK151130|Fbxo3|57443|F-box protein 3	AK151857|Fbxo3|57443|F-box protein 3	AK152780|Fbxo3|57443|F-box protein 3	AK207976|Fbxo3|57443|F-box protein 3	AK215292|Fbxo3|57443|F-box protein 3	AK215501|Fbxo3|57443|F-box protein 3	AF233226|Fbxo3|57443|F-box protein 3	AK019550|Fbxo3|57443|F-box protein 3	AK031185|Fbxo3|57443|F-box protein 3	AK009024|Fbxo3|57443|F-box protein 3	AK167075|Fbxo3|57443|F-box protein 3	BC010212|Fbxo3|57443|F-box protein 3
mm9_v1_chr3_+_63100101_63100109	0.107522	HOX{A6,A7,B6,B7}.p2	AK033824|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr7_+_19766490_19766570	0.107041	HOX{A6,A7,B6,B7}.p2	NM_001162996|Eml2|72205|echinoderm microtubule associated protein like 2	NM_028153|Eml2|72205|echinoderm microtubule associated protein like 2	BC055476|Eml2|72205|echinoderm microtubule associated protein like 2	AK005562|Eml2|72205|echinoderm microtubule associated protein like 2
mm9_v1_chr10_+_128258826_128258995	0.106891	HOX{A6,A7,B6,B7}.p2	NM_025364|Sarnp|66118|SAP domain containing ribonucleoprotein	AK146248|Sarnp|66118|SAP domain containing ribonucleoprotein	AK018773|Sarnp|66118|SAP domain containing ribonucleoprotein	BC157909|Sarnp|66118|SAP domain containing ribonucleoprotein	BC158023|Sarnp|66118|SAP domain containing ribonucleoprotein	BC172063|Sarnp|66118|SAP domain containing ribonucleoprotein	AK003453|Sarnp|66118|SAP domain containing ribonucleoprotein	AK088266|Sarnp|66118|SAP domain containing ribonucleoprotein	BC027510|Sarnp|66118|SAP domain containing ribonucleoprotein	BC094393|Sarnp|66118|SAP domain containing ribonucleoprotein	AK212934|Sarnp|66118|SAP domain containing ribonucleoprotein
mm9_v1_chr14_-_102008407_102008407	0.106774	HOX{A6,A7,B6,B7}.p2	AK039337|Tbc1d4|210789|TBC1 domain family, member 4	NM_001081278|Tbc1d4|210789|TBC1 domain family, member 4
mm9_v1_chr14_+_122874625_122874656	0.106578	HOX{A6,A7,B6,B7}.p2	D70848|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr14_-_31166671_31166671	0.106366	HOX{A6,A7,B6,B7}.p2	AK147415|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_001083616|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr5_-_31829101_31829134	0.105763	HOX{A6,A7,B6,B7}.p2	AK047063|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like	AK144989|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like	NM_028150|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like
mm9_v1_chrX_-_54756877_54756933	0.104691	HOX{A6,A7,B6,B7}.p2	AK138185|Gpr101|245424|G protein-coupled receptor 101	DQ198079|Gpr101|245424|G protein-coupled receptor 101	AK138370|Gpr101|245424|G protein-coupled receptor 101	NM_001033360|Gpr101|245424|G protein-coupled receptor 101
mm9_v1_chr5_+_111308801_111308858	0.104605	HOX{A6,A7,B6,B7}.p2	NM_024477|Ttc28|209683|tetratricopeptide repeat domain 28	AK009368|Ttc28|209683|tetratricopeptide repeat domain 28
mm9_v1_chr17_+_27993426_27993458	0.103936	HOX{A6,A7,B6,B7}.p2	AK089790|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK144200|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK220293|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	NM_001080769|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1
mm9_v1_chr17_-_80295336_80295462	0.103848	HOX{A6,A7,B6,B7}.p2	AK135988|Atl2|56298|atlastin GTPase 2	BC060501|Atl2|56298|atlastin GTPase 2	NM_019717|Atl2|56298|atlastin GTPase 2	AK038697|Atl2|56298|atlastin GTPase 2	AK043907|Atl2|56298|atlastin GTPase 2	AK008381|Atl2|56298|atlastin GTPase 2	NM_178050|Atl2|56298|atlastin GTPase 2
mm9_v1_chr2_-_120796395_120796492	0.103194	HOX{A6,A7,B6,B7}.p2	AF061555|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1	NM_009461|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr16_-_55843956_55843970	0.103079	HOX{A6,A7,B6,B7}.p2	AK034283|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr8_+_107821562_107821689	0.102787	HOX{A6,A7,B6,B7}.p2	BC026649|E2f4|104394|E2F transcription factor 4	NM_148952|E2f4|104394|E2F transcription factor 4	BC027048|E2f4|104394|E2F transcription factor 4	AK145950|E2f4|104394|E2F transcription factor 4	AK157028|E2f4|104394|E2F transcription factor 4	BC023859|E2f4|104394|E2F transcription factor 4	AK183880|E2f4|104394|E2F transcription factor 4
mm9_v1_chr12_-_77923303_77923517	0.102553	HOX{A6,A7,B6,B7}.p2	AB232610|Rab15|104886|RAB15, member RAS oncogene family	AK158637|Rab15|104886|RAB15, member RAS oncogene family	BC013790|Rab15|104886|RAB15, member RAS oncogene family	AK158768|Rab15|104886|RAB15, member RAS oncogene family	BC027769|Rab15|104886|RAB15, member RAS oncogene family	NM_134050|Rab15|104886|RAB15, member RAS oncogene family
mm9_v1_chr7_+_22296798_22296798	0.102514	HOX{A6,A7,B6,B7}.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr1_+_173259275_173259328	0.102178	HOX{A6,A7,B6,B7}.p2	NM_001128609|Dedd|21945|death effector domain-containing	NM_011615|Dedd|21945|death effector domain-containing	AK157609|Dedd|21945|death effector domain-containing
mm9_v1_chr19_-_45857542_45857780	0.10123	HOX{A6,A7,B6,B7}.p2	AF132214|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC020093|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC054821|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	NM_023799|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr1_-_78485413_78485452	0.101033	HOX{A6,A7,B6,B7}.p2	AK168923|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK045432|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	NM_011811|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	BC002313|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK076607|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK134799|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK010271|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK012154|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK165645|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK167945|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK169621|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	BC016428|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit
mm9_v1_chr11_-_120479218_120479273	0.100943	HOX{A6,A7,B6,B7}.p2	AK166319|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK140458|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK144544|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine
mm9_v1_chr17_-_35372703_35372759	0.100818	HOX{A6,A7,B6,B7}.p2	AK133517|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC013269|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF095902|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_010909|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
mm9_v1_chr1_+_154246959_154247050	0.100801	HOX{A6,A7,B6,B7}.p2	AK085716|Glt25d2|269132|glycosyltransferase 25 domain containing 2	AK052838|Glt25d2|269132|glycosyltransferase 25 domain containing 2	NM_177756|Glt25d2|269132|glycosyltransferase 25 domain containing 2	AK134084|Glt25d2|269132|glycosyltransferase 25 domain containing 2	BC068118|Glt25d2|269132|glycosyltransferase 25 domain containing 2
mm9_v1_chr10_-_60215524_60215546	0.100703	HOX{A6,A7,B6,B7}.p2	AK034133|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	AF326986|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	AK157868|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	NM_023596|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	AK051317|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3
mm9_v1_chrX_+_96133407_96133568	0.100429	HOX{A6,A7,B6,B7}.p2	AK045453|Yipf6|77929|Yip1 domain family, member 6	BC048712|Yipf6|77929|Yip1 domain family, member 6	AK079683|Yipf6|77929|Yip1 domain family, member 6	AK020780|Yipf6|77929|Yip1 domain family, member 6	AK143152|Yipf6|77929|Yip1 domain family, member 6
mm9_v1_chrX_+_50265390_50265552	0.100316	HOX{A6,A7,B6,B7}.p2	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr16_-_85901362_85901374	0.100087	HOX{A6,A7,B6,B7}.p2	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr12_-_101121613_101121712	0.099713	HOX{A6,A7,B6,B7}.p2	BC049109|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK035051|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011836|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011507|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	NM_030172|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK132473|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene
mm9_v1_chr12_-_85489188_85489438	0.0996826	HOX{A6,A7,B6,B7}.p2	BC116688|Pnma1|70481|paraneoplastic antigen MA1	BC116687|Pnma1|70481|paraneoplastic antigen MA1	AK017476|Pnma1|70481|paraneoplastic antigen MA1	AK028331|Pnma1|70481|paraneoplastic antigen MA1	AK136933|Pnma1|70481|paraneoplastic antigen MA1	NM_027438|Pnma1|70481|paraneoplastic antigen MA1
mm9_v1_chr11_-_45768976_45768987	0.0996659	HOX{A6,A7,B6,B7}.p2	BC092541|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK017532|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr16_+_14705932_14706066	0.0995506	HOX{A6,A7,B6,B7}.p2	AK133968|Snai2|20583|snail homolog 2 (Drosophila)	BC062164|Snai2|20583|snail homolog 2 (Drosophila)	NM_011415|Snai2|20583|snail homolog 2 (Drosophila)	U79550|Snai2|20583|snail homolog 2 (Drosophila)	U97059|Snai2|20583|snail homolog 2 (Drosophila)
mm9_v1_chr3_+_117278144_117278545	0.0995302	HOX{A6,A7,B6,B7}.p2	AK032034|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK082692|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	BC031879|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK076176|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	NM_029425|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK014763|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene	AK043629|4833424O15Rik|75769|RIKEN cDNA 4833424O15 gene
mm9_v1_chr3_-_53461276_53461276	0.0993121	HOX{A6,A7,B6,B7}.p2	AB236662|Frem2|242022|Fras1 related extracellular matrix protein 2	NM_172862|Frem2|242022|Fras1 related extracellular matrix protein 2
mm9_v1_chr4_-_41411865_41411961	0.0991897	HOX{A6,A7,B6,B7}.p2	AK050683|Kif24|109242|kinesin family member 24	AK016916|Kif24|109242|kinesin family member 24	BC067395|Kif24|109242|kinesin family member 24	AK084967|Kif24|109242|kinesin family member 24	AK135307|Kif24|109242|kinesin family member 24	NM_024241|Kif24|109242|kinesin family member 24	AK020445|Kif24|109242|kinesin family member 24
mm9_v1_chr11_-_106077657_106077682	0.0991485	HOX{A6,A7,B6,B7}.p2	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr11_+_79902901_79902965	0.0990959	HOX{A6,A7,B6,B7}.p2	NM_001029856|Atad5|237877|ATPase family, AAA domain containing 5	BC038279|Atad5|237877|ATPase family, AAA domain containing 5	AK053857|Atad5|237877|ATPase family, AAA domain containing 5	AK085211|Atad5|237877|ATPase family, AAA domain containing 5	AY557610|Atad5|237877|ATPase family, AAA domain containing 5	AK165945|Atad5|237877|ATPase family, AAA domain containing 5	AK048355|Atad5|237877|ATPase family, AAA domain containing 5	AK032814|Atad5|237877|ATPase family, AAA domain containing 5
mm9_v1_chr5_-_101103051_101103304	0.0990907	HOX{A6,A7,B6,B7}.p2	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr7_-_4966268_4966339	0.0990649	HOX{A6,A7,B6,B7}.p2	AK142205|Fiz1|23877|Flt3 interacting zinc finger protein 1	NM_001110328|Fiz1|23877|Flt3 interacting zinc finger protein 1	NM_001110329|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chr3_+_88420105_88420182	0.0988009	HOX{A6,A7,B6,B7}.p2	NM_001198911|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK144972|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr11_-_96168185_96168223	0.0987935	HOX{A6,A7,B6,B7}.p2	AK002860|0610040B09Rik|75395|RIKEN cDNA 0610040B09 gene
mm9_v1_chr15_-_54903657_54903709	0.0985075	HOX{A6,A7,B6,B7}.p2	BC147638|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC151079|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK147903|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001081288|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr6_-_87622057_87622161	0.0980654	HOX{A6,A7,B6,B7}.p2	BC002179|Aplf|72103|aprataxin and PNKP like factor	AK078805|Aplf|72103|aprataxin and PNKP like factor	AK034191|Aplf|72103|aprataxin and PNKP like factor	AK008513|Aplf|72103|aprataxin and PNKP like factor	NM_001170489|Aplf|72103|aprataxin and PNKP like factor	NM_024251|Aplf|72103|aprataxin and PNKP like factor
mm9_v1_chr7_+_75097142_75097267	0.0980145	HOX{A6,A7,B6,B7}.p2	NM_010513|Igf1r|16001|insulin-like growth factor I receptor
mm9_v1_chr16_-_36562219_36562219	0.0979244	HOX{A6,A7,B6,B7}.p2	AF110178|Casr|12374|calcium-sensing receptor	AF110179|Casr|12374|calcium-sensing receptor	NM_013803|Casr|12374|calcium-sensing receptor
mm9_v1_chr9_-_21806980_21807039	0.0977059	HOX{A6,A7,B6,B7}.p2	BC057069|Ccdc151|77609|coiled-coil domain containing 151	BC051179|Ccdc151|77609|coiled-coil domain containing 151
mm9_v1_chr9_-_37421173_37421309	0.097295	HOX{A6,A7,B6,B7}.p2	AK005571|Spa17|20686|sperm autoantigenic protein 17	BC059727|Spa17|20686|sperm autoantigenic protein 17	NM_011449|Spa17|20686|sperm autoantigenic protein 17	Z46299|Spa17|20686|sperm autoantigenic protein 17
mm9_v1_chr4_-_43038575_43038674	0.0966706	HOX{A6,A7,B6,B7}.p2	AK220315|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC141058|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	AB038560|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	NM_020035|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC092394|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC036977|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	AK050819|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O
mm9_v1_chr5_-_108026906_108026906	0.0966412	HOX{A6,A7,B6,B7}.p2	AK034160|Glmn|170823|glomulin, FKBP associated protein	NM_001161738|Glmn|170823|glomulin, FKBP associated protein
mm9_v1_chr3_+_88425011_88425071	0.0965929	HOX{A6,A7,B6,B7}.p2	NM_008487|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK156379|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AF177032|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	U28495|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr5_-_124804583_124804698	0.0964489	HOX{A6,A7,B6,B7}.p2	BC083075|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	NM_013812|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	AK004852|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr12_+_79849976_79850002	0.0963108	HOX{A6,A7,B6,B7}.p2	AK032731|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK162014|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC075698|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK014444|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr18_+_37493599_37493681	0.0962703	HOX{A6,A7,B6,B7}.p2	BC150716|Pcdhb6|93877|protocadherin beta 6	AY013788|Pcdhb6|93877|protocadherin beta 6	NM_053131|Pcdhb6|93877|protocadherin beta 6
mm9_v1_chr16_+_56477956_56478012	0.0962006	HOX{A6,A7,B6,B7}.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr19_+_4139744_4139808	0.0955524	HOX{A6,A7,B6,B7}.p2	AK044225|Gpr152|269053|G protein-coupled receptor 152	AK044366|Gpr152|269053|G protein-coupled receptor 152	BC099681|Gpr152|269053|G protein-coupled receptor 152	NM_206973|Gpr152|269053|G protein-coupled receptor 152
mm9_v1_chr8_+_47254909_47254909	0.0955438	HOX{A6,A7,B6,B7}.p2	BC058092|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	NM_025747|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene
mm9_v1_chr17_+_88929523_88929634	0.0954168	HOX{A6,A7,B6,B7}.p2	BC137673|Klraq1|73825|KLRAQ motif containing 1	AK170254|Klraq1|73825|KLRAQ motif containing 1	BC106118|Klraq1|73825|KLRAQ motif containing 1	AK028185|Klraq1|73825|KLRAQ motif containing 1	AK155094|Klraq1|73825|KLRAQ motif containing 1
mm9_v1_chr14_-_76956664_76956695	0.095147	HOX{A6,A7,B6,B7}.p2	BC100483|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	BC115492|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	BC115493|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2
mm9_v1_chr14_+_52898820_52898820	0.0946941	HOX{A6,A7,B6,B7}.p2	NM_023434|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr11_+_87861165_87861225	0.0946578	HOX{A6,A7,B6,B7}.p2	AK150535|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_001078167|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_173374|Srsf1|110809|serine/arginine-rich splicing factor 1	AK053674|Srsf1|110809|serine/arginine-rich splicing factor 1	AK018176|Srsf1|110809|serine/arginine-rich splicing factor 1	BC058627|Srsf1|110809|serine/arginine-rich splicing factor 1	AK078715|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169203|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169623|Srsf1|110809|serine/arginine-rich splicing factor 1	AK190745|Srsf1|110809|serine/arginine-rich splicing factor 1
mm9_v1_chr11_+_108256590_108256640	0.0942044	HOX{A6,A7,B6,B7}.p2	Y11356|Apoh|11818|apolipoprotein H	NM_013475|Apoh|11818|apolipoprotein H	BC011037|Apoh|11818|apolipoprotein H	BC019811|Apoh|11818|apolipoprotein H	AK010926|Apoh|11818|apolipoprotein H	S70439|Apoh|11818|apolipoprotein H	BC053338|Apoh|11818|apolipoprotein H	D10056|Apoh|11818|apolipoprotein H
mm9_v1_chr15_-_79913763_79913849	0.0940169	HOX{A6,A7,B6,B7}.p2	BC094059|Rpl3|27367|ribosomal protein L3	BC083134|Rpl3|27367|ribosomal protein L3	Y00225|Rpl3|27367|ribosomal protein L3	BC009655|Rpl3|27367|ribosomal protein L3	BC085495|Rpl3|27367|ribosomal protein L3	AK166433|Rpl3|27367|ribosomal protein L3	AK169321|Rpl3|27367|ribosomal protein L3	AK168126|Rpl3|27367|ribosomal protein L3	AK168224|Rpl3|27367|ribosomal protein L3	AK168744|Rpl3|27367|ribosomal protein L3	AK168040|Rpl3|27367|ribosomal protein L3	AK168059|Rpl3|27367|ribosomal protein L3	AK168128|Rpl3|27367|ribosomal protein L3	AK170819|Rpl3|27367|ribosomal protein L3	AK088993|Rpl3|27367|ribosomal protein L3	AK144518|Rpl3|27367|ribosomal protein L3	AK144816|Rpl3|27367|ribosomal protein L3	AK146502|Rpl3|27367|ribosomal protein L3	AK149494|Rpl3|27367|ribosomal protein L3	AK151057|Rpl3|27367|ribosomal protein L3	AK151084|Rpl3|27367|ribosomal protein L3	AK151142|Rpl3|27367|ribosomal protein L3	AK151426|Rpl3|27367|ribosomal protein L3	AK151596|Rpl3|27367|ribosomal protein L3	AK151740|Rpl3|27367|ribosomal protein L3	AK166825|Rpl3|27367|ribosomal protein L3	AK167787|Rpl3|27367|ribosomal protein L3	AK167947|Rpl3|27367|ribosomal protein L3	AK169060|Rpl3|27367|ribosomal protein L3	AK169235|Rpl3|27367|ribosomal protein L3	AK172280|Rpl3|27367|ribosomal protein L3	BC158039|Rpl3|27367|ribosomal protein L3	NM_013762|Rpl3|27367|ribosomal protein L3
mm9_v1_chr11_-_94183188_94183309	0.0939487	HOX{A6,A7,B6,B7}.p2	AK014362|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	BC009092|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	NM_026313|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK078090|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK151228|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK151839|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)	AK019464|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)
mm9_v1_chrX_+_46823626_46823742	0.0937208	HOX{A6,A7,B6,B7}.p2	NM_001081123|Arhgap36|75404|Rho GTPase activating protein 36	BC145645|Arhgap36|75404|Rho GTPase activating protein 36	AK048167|Arhgap36|75404|Rho GTPase activating protein 36
mm9_v1_chr7_-_7230911_7230973	0.093144	HOX{A6,A7,B6,B7}.p2	AK046541|Vmn2r29|76229|vomeronasal 2, receptor 29	AK084962|Vmn2r29|76229|vomeronasal 2, receptor 29	BC096375|Vmn2r29|76229|vomeronasal 2, receptor 29	AK018294|Vmn2r29|76229|vomeronasal 2, receptor 29
mm9_v1_chr17_-_45736533_45736548	0.0930008	HOX{A6,A7,B6,B7}.p2	AK050089|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr11_+_69805051_69805216	0.0925857	HOX{A6,A7,B6,B7}.p2	BC002126|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC024621|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AK002879|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AF161587|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC029329|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AK011731|Gabarap|56486|gamma-aminobutyric acid receptor associated protein
mm9_v1_chr8_-_87186691_87186755	0.0924555	HOX{A6,A7,B6,B7}.p2	AK172332|Ier2|15936|immediate early response 2	BC002067|Ier2|15936|immediate early response 2	AK170433|Ier2|15936|immediate early response 2	AK032692|Ier2|15936|immediate early response 2	AK144601|Ier2|15936|immediate early response 2	AK150860|Ier2|15936|immediate early response 2	AK152747|Ier2|15936|immediate early response 2	M31042|Ier2|15936|immediate early response 2	NM_010499|Ier2|15936|immediate early response 2	M59821|Ier2|15936|immediate early response 2
mm9_v1_chr18_-_42434831_42434856	0.0924343	HOX{A6,A7,B6,B7}.p2	AK018420|8430416G17Rik|71469|RIKEN cDNA 8430416G17 gene	BC038171|8430416G17Rik|71469|RIKEN cDNA 8430416G17 gene
mm9_v1_chr11_-_97561650_97561666	0.0919481	HOX{A6,A7,B6,B7}.p2	D90085|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr9_+_95855159_95855287	0.091736	HOX{A6,A7,B6,B7}.p2	AK162932|Xrn1|24127|5'-3' exoribonuclease 1	NM_011916|Xrn1|24127|5'-3' exoribonuclease 1	X91617|Xrn1|24127|5'-3' exoribonuclease 1	AK142311|Xrn1|24127|5'-3' exoribonuclease 1	AK162848|Xrn1|24127|5'-3' exoribonuclease 1	AK163245|Xrn1|24127|5'-3' exoribonuclease 1	AK143400|Xrn1|24127|5'-3' exoribonuclease 1	BC054108|Xrn1|24127|5'-3' exoribonuclease 1	BC100578|Xrn1|24127|5'-3' exoribonuclease 1	D88026|Xrn1|24127|5'-3' exoribonuclease 1
mm9_v1_chr17_-_46168654_46168719	0.0916891	HOX{A6,A7,B6,B7}.p2	AY707864|Vegfa|22339|vascular endothelial growth factor A	AY750956|Vegfa|22339|vascular endothelial growth factor A	AY750957|Vegfa|22339|vascular endothelial growth factor A	EF028705|Vegfa|22339|vascular endothelial growth factor A	BC061468|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr5_+_67651890_67652024	0.0915064	HOX{A6,A7,B6,B7}.p2	AK012413|Tmem33|67878|transmembrane protein 33	NM_028975|Tmem33|67878|transmembrane protein 33	NM_030108|Tmem33|67878|transmembrane protein 33	AK032555|Tmem33|67878|transmembrane protein 33	AK005493|Tmem33|67878|transmembrane protein 33	AK007750|Tmem33|67878|transmembrane protein 33	AK017281|Tmem33|67878|transmembrane protein 33	AK153441|Tmem33|67878|transmembrane protein 33	AK007607|Tmem33|67878|transmembrane protein 33	BC005562|Tmem33|67878|transmembrane protein 33	AK165369|Tmem33|67878|transmembrane protein 33
mm9_v1_chr1_-_37921651_37921692	0.0914216	HOX{A6,A7,B6,B7}.p2	AK170053|Tsga10|211484|testis specific 10
mm9_v1_chr9_+_39955706_39955790	0.0910996	HOX{A6,A7,B6,B7}.p2	AK006538|Tmem225|75667|transmembrane protein 225	NM_029379|Tmem225|75667|transmembrane protein 225	BC116869|Tmem225|75667|transmembrane protein 225	BC116871|Tmem225|75667|transmembrane protein 225
mm9_v1_chr7_-_147164587_147164653	0.0907047	HOX{A6,A7,B6,B7}.p2	BC025923|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC145460|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC145461|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC145730|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	BC171930|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	AK164921|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	AK131789|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene	NM_001033465|6430531B16Rik|381933|RIKEN cDNA 6430531B16 gene
mm9_v1_chr5_+_91503642_91503677	0.0906416	HOX{A6,A7,B6,B7}.p2	NM_007950|Ereg|13874|epiregulin	D30782|Ereg|13874|epiregulin	BC027838|Ereg|13874|epiregulin
mm9_v1_chr3_-_144233091_144233106	0.0902557	HOX{A6,A7,B6,B7}.p2	BC025443|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr8_+_114062242_114062242	0.0900642	HOX{A6,A7,B6,B7}.p2	NM_001168623|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr11_+_4604650_4604703	0.0900365	HOX{A6,A7,B6,B7}.p2	AK051823|Zmat5|67178|zinc finger, matrin type 5	AK012098|Zmat5|67178|zinc finger, matrin type 5	NM_026015|Zmat5|67178|zinc finger, matrin type 5	AK003361|Zmat5|67178|zinc finger, matrin type 5	AK007565|Zmat5|67178|zinc finger, matrin type 5	AK013415|Zmat5|67178|zinc finger, matrin type 5	BC031796|Zmat5|67178|zinc finger, matrin type 5
mm9_v1_chr7_-_86887995_86888016	0.0899837	HOX{A6,A7,B6,B7}.p2	AK076776|Pex11a|18631|peroxisomal biogenesis factor 11 alpha
mm9_v1_chr11_-_94410463_94410520	0.0899103	HOX{A6,A7,B6,B7}.p2	BC139274|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC139276|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC145594|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK148401|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK046706|Rsad1|237926|radical S-adenosyl methionine domain containing 1	NM_001013381|Rsad1|237926|radical S-adenosyl methionine domain containing 1
mm9_v1_chr7_+_53496356_53496372	0.0896116	HOX{A6,A7,B6,B7}.p2	NM_013624|Otog|18419|otogelin	U96411|Otog|18419|otogelin	AK165831|Otog|18419|otogelin
mm9_v1_chr7_-_53121804_53122050	0.0889007	HOX{A6,A7,B6,B7}.p2	AB154244|Grin2d|14814|glutamate receptor, ionotropic, NMDA2D (epsilon 4)	AB154245|Grin2d|14814|glutamate receptor, ionotropic, NMDA2D (epsilon 4)	D12822|Grin2d|14814|glutamate receptor, ionotropic, NMDA2D (epsilon 4)	NM_008172|Grin2d|14814|glutamate receptor, ionotropic, NMDA2D (epsilon 4)
mm9_v1_chr6_+_17587046_17587119	0.0886219	HOX{A6,A7,B6,B7}.p2	AK150587|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	BC082589|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	NM_007604|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK007550|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AY544984|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK008204|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr9_-_110003513_110003552	0.0884412	HOX{A6,A7,B6,B7}.p2	BC016202|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr7_+_134005943_134005961	0.0883912	HOX{A6,A7,B6,B7}.p2	AK135526|Hirip3|233876|HIRA interacting protein 3	AK045122|Hirip3|233876|HIRA interacting protein 3	AK161657|Hirip3|233876|HIRA interacting protein 3
mm9_v1_chr18_+_39152852_39152929	0.0883216	HOX{A6,A7,B6,B7}.p2	AK129176|Arhgap26|71302|Rho GTPase activating protein 26	BC141394|Arhgap26|71302|Rho GTPase activating protein 26
mm9_v1_chrX_-_34625145_34625200	0.0872473	HOX{A6,A7,B6,B7}.p2	AK150955|Rpl39|67248|ribosomal protein L39	BC094645|Rpl39|67248|ribosomal protein L39	BC039092|Rpl39|67248|ribosomal protein L39	BC139247|Rpl39|67248|ribosomal protein L39	BC139249|Rpl39|67248|ribosomal protein L39	AK002591|Rpl39|67248|ribosomal protein L39	AK008853|Rpl39|67248|ribosomal protein L39	AK168773|Rpl39|67248|ribosomal protein L39	AK028139|Rpl39|67248|ribosomal protein L39	AK005511|Rpl39|67248|ribosomal protein L39	AK088761|Rpl39|67248|ribosomal protein L39	NM_026055|Rpl39|67248|ribosomal protein L39	AK007821|Rpl39|67248|ribosomal protein L39	AK013381|Rpl39|67248|ribosomal protein L39	AK146772|Rpl39|67248|ribosomal protein L39
mm9_v1_chr3_+_85888818_85888835	0.0871304	HOX{A6,A7,B6,B7}.p2	BC028254|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chrX_+_9829439_9829558	0.0868705	HOX{A6,A7,B6,B7}.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr12_-_105011807_105011857	0.0865626	HOX{A6,A7,B6,B7}.p2	NM_009246|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr13_+_17787239_17787293	0.086449	HOX{A6,A7,B6,B7}.p2	AK030630|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	NM_025479|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK012770|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK011919|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	AK141333|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	BC139338|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene	BC139341|2810021B07Rik|66308|RIKEN cDNA 2810021B07 gene
mm9_v1_chr6_-_83522410_83522497	0.0860873	HOX{A6,A7,B6,B7}.p2	AK136961|Stambp|70527|STAM binding protein	AK220541|Stambp|70527|STAM binding protein	BC006939|Stambp|70527|STAM binding protein	BC003497|Stambp|70527|STAM binding protein	BC025111|Stambp|70527|STAM binding protein	AB010123|Stambp|70527|STAM binding protein	AK019907|Stambp|70527|STAM binding protein	AK046995|Stambp|70527|STAM binding protein	AK017600|Stambp|70527|STAM binding protein	AK168810|Stambp|70527|STAM binding protein	AK139391|Stambp|70527|STAM binding protein	NM_024239|Stambp|70527|STAM binding protein
mm9_v1_chr5_-_151468105_151468189	0.0857811	HOX{A6,A7,B6,B7}.p2	AK038740|N4bp2l2|381695|NEDD4 binding protein 2-like 2	BC037393|N4bp2l2|381695|NEDD4 binding protein 2-like 2	NM_201369|N4bp2l2|381695|NEDD4 binding protein 2-like 2
mm9_v1_chr8_-_49075884_49075954	0.0855042	HOX{A6,A7,B6,B7}.p2	AK147648|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	BC067050|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	NM_133791|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	AB045323|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chrX_-_132619793_132619793	0.0853003	HOX{A6,A7,B6,B7}.p2	AB178899|Nxf3|245610|nuclear RNA export factor 3	NM_001024141|Nxf3|245610|nuclear RNA export factor 3
mm9_v1_chrX_+_148237785_148237953	0.0850989	HOX{A6,A7,B6,B7}.p2	AK163416|Huwe1|59026|HECT, UBA and WWE domain containing 1	NM_021523|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK049460|Huwe1|59026|HECT, UBA and WWE domain containing 1	DQ097265|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK045183|Huwe1|59026|HECT, UBA and WWE domain containing 1	AY772010|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165140|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165648|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK031374|Huwe1|59026|HECT, UBA and WWE domain containing 1
mm9_v1_chr11_+_102051080_102051165	0.0850829	HOX{A6,A7,B6,B7}.p2	AK165395|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	AY186239|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr10_+_59465552_59465606	0.0850393	HOX{A6,A7,B6,B7}.p2	AK053811|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	BC030905|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	NM_026937|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK144614|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK171958|Ascc1|69090|activating signal cointegrator 1 complex subunit 1
mm9_v1_chr15_-_91022165_91022189	0.0848888	HOX{A6,A7,B6,B7}.p2	BC019187|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr15_-_58220798_58220828	0.0842778	HOX{A6,A7,B6,B7}.p2	BC013521|Anxa13|69787|annexin A13	AJ306451|Anxa13|69787|annexin A13	NM_027211|Anxa13|69787|annexin A13
mm9_v1_chr18_-_61008391_61008636	0.0841	HOX{A6,A7,B6,B7}.p2	U81030|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AF001794|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC057342|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC060105|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC046608|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC052669|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AK089518|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC021514|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_001198984|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_011552|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog
mm9_v1_chr18_+_32227377_32227461	0.0839196	HOX{A6,A7,B6,B7}.p2	NM_173441|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK033013|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK041691|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK028247|Iws1|73473|IWS1 homolog (S. cerevisiae)	AK163972|Iws1|73473|IWS1 homolog (S. cerevisiae)	BC068184|Iws1|73473|IWS1 homolog (S. cerevisiae)
mm9_v1_chr2_+_122564227_122564360	0.0826882	HOX{A6,A7,B6,B7}.p2	AK147116|Pldn|18457|pallidin	NM_019788|Pldn|18457|pallidin	BC016554|Pldn|18457|pallidin	AK172571|Pldn|18457|pallidin	AK077720|Pldn|18457|pallidin	AK038381|Pldn|18457|pallidin	BC085260|Pldn|18457|pallidin	AK160580|Pldn|18457|pallidin	AK170964|Pldn|18457|pallidin
mm9_v1_chr5_-_76792766_76792812	0.0824977	HOX{A6,A7,B6,B7}.p2	BC125545|Nmu|56183|neuromedin U	BC138071|Nmu|56183|neuromedin U	BC145135|Nmu|56183|neuromedin U	AF203444|Nmu|56183|neuromedin U	NM_019515|Nmu|56183|neuromedin U	AK077478|Nmu|56183|neuromedin U
mm9_v1_chrX_-_96665980_96666083	0.0823615	HOX{A6,A7,B6,B7}.p2	AK005373|Pja1|18744|praja1, RING-H2 motif containing	BC037616|Pja1|18744|praja1, RING-H2 motif containing	AK181060|Pja1|18744|praja1, RING-H2 motif containing	AK181628|Pja1|18744|praja1, RING-H2 motif containing	AK188149|Pja1|18744|praja1, RING-H2 motif containing	BC025975|Pja1|18744|praja1, RING-H2 motif containing	AK145943|Pja1|18744|praja1, RING-H2 motif containing	AF335250|Pja1|18744|praja1, RING-H2 motif containing	AF335251|Pja1|18744|praja1, RING-H2 motif containing	AF335252|Pja1|18744|praja1, RING-H2 motif containing	AK135382|Pja1|18744|praja1, RING-H2 motif containing	NM_001083110|Pja1|18744|praja1, RING-H2 motif containing	NM_008853|Pja1|18744|praja1, RING-H2 motif containing
mm9_v1_chr11_-_68825972_68825998	0.0819962	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr15_-_98661877_98661941	0.0817702	HOX{A6,A7,B6,B7}.p2	AK159583|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	BC086660|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	AK138324|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	AF036535|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	NM_016781|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit
mm9_v1_chr7_+_56044372_56044374	0.0813162	HOX{A6,A7,B6,B7}.p2	AK010382|Zdhhc13|243983|zinc finger, DHHC domain containing 13	NM_028031|Zdhhc13|243983|zinc finger, DHHC domain containing 13
mm9_v1_chr7_-_133727793_133727820	0.0812818	HOX{A6,A7,B6,B7}.p2	NM_001146311|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC047120|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr8_+_93594010_93594012	0.0812083	HOX{A6,A7,B6,B7}.p2	AK160027|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr14_+_105658112_105658180	0.0808878	HOX{A6,A7,B6,B7}.p2	BC117075|Ndfip2|76273|Nedd4 family interacting protein 2	BC119092|Ndfip2|76273|Nedd4 family interacting protein 2	AK013250|Ndfip2|76273|Nedd4 family interacting protein 2	AF411608|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr12_+_79849894_79849915	0.0805045	HOX{A6,A7,B6,B7}.p2	AK133187|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC067404|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr3_-_117571853_117571885	0.0804637	HOX{A6,A7,B6,B7}.p2	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr5_+_22940294_22940297	0.0803298	HOX{A6,A7,B6,B7}.p2	BC103801|Mll5|69188|myeloid/lymphoid or mixed-lineage leukemia 5
mm9_v1_chr4_-_116480186_116480196	0.0803013	HOX{A6,A7,B6,B7}.p2	AK046576|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr9_+_103207488_103207656	0.0803012	HOX{A6,A7,B6,B7}.p2	AK085031|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK129104|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084654|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084869|Topbp1|235559|topoisomerase (DNA) II binding protein 1	BC049797|Topbp1|235559|topoisomerase (DNA) II binding protein 1	NM_176979|Topbp1|235559|topoisomerase (DNA) II binding protein 1
mm9_v1_chr2_-_112099427_112099447	0.0802783	HOX{A6,A7,B6,B7}.p2	BC125332|BC125332|213765|cDNA sequence BC125332	BC125334|BC125332|213765|cDNA sequence BC125332	AK077049|BC125332|213765|cDNA sequence BC125332	NM_172521|BC125332|213765|cDNA sequence BC125332
mm9_v1_chr17_-_28536455_28536544	0.0802031	HOX{A6,A7,B6,B7}.p2	AK199818|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr1_-_36614370_36614401	0.0800386	HOX{A6,A7,B6,B7}.p2	AK173247|Sema4c|20353|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C	AK090073|Sema4c|20353|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm9_v1_chr5_+_31543235_31543349	0.0799792	HOX{A6,A7,B6,B7}.p2	AK077440|Nrbp1|192292|nuclear receptor binding protein 1	AK170501|Nrbp1|192292|nuclear receptor binding protein 1	AF302138|Nrbp1|192292|nuclear receptor binding protein 1	NM_147201|Nrbp1|192292|nuclear receptor binding protein 1	AK046142|Nrbp1|192292|nuclear receptor binding protein 1	BC018463|Nrbp1|192292|nuclear receptor binding protein 1	BC004756|Nrbp1|192292|nuclear receptor binding protein 1	AK191367|Nrbp1|192292|nuclear receptor binding protein 1
mm9_v1_chr12_-_105011767_105011793	0.0797766	HOX{A6,A7,B6,B7}.p2	M75718|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr17_-_35975148_35975258	0.0797679	HOX{A6,A7,B6,B7}.p2	BC003825|Tubb5|22154|tubulin, beta 5	AK076196|Tubb5|22154|tubulin, beta 5	AK148978|Tubb5|22154|tubulin, beta 5	AK167808|Tubb5|22154|tubulin, beta 5	AK168271|Tubb5|22154|tubulin, beta 5	AK169123|Tubb5|22154|tubulin, beta 5	AK011263|Tubb5|22154|tubulin, beta 5	AK165249|Tubb5|22154|tubulin, beta 5	AK169210|Tubb5|22154|tubulin, beta 5	AK010960|Tubb5|22154|tubulin, beta 5	AK011765|Tubb5|22154|tubulin, beta 5	AK012350|Tubb5|22154|tubulin, beta 5	AK017806|Tubb5|22154|tubulin, beta 5	AK051164|Tubb5|22154|tubulin, beta 5	AK051393|Tubb5|22154|tubulin, beta 5	AK083327|Tubb5|22154|tubulin, beta 5	AK146567|Tubb5|22154|tubulin, beta 5	AK151215|Tubb5|22154|tubulin, beta 5	AK151670|Tubb5|22154|tubulin, beta 5	AK160225|Tubb5|22154|tubulin, beta 5	AK161575|Tubb5|22154|tubulin, beta 5	AK167691|Tubb5|22154|tubulin, beta 5	AK167779|Tubb5|22154|tubulin, beta 5	AK167926|Tubb5|22154|tubulin, beta 5	AK169295|Tubb5|22154|tubulin, beta 5	AK169606|Tubb5|22154|tubulin, beta 5	NM_011655|Tubb5|22154|tubulin, beta 5
mm9_v1_chr18_-_35114004_35114004	0.0796882	HOX{A6,A7,B6,B7}.p2	BC052727|Hspa9|15526|heat shock protein 9	BC057343|Hspa9|15526|heat shock protein 9	NM_010481|Hspa9|15526|heat shock protein 9
mm9_v1_chr19_-_7877065_7877081	0.0796446	HOX{A6,A7,B6,B7}.p2	AJ132857|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr8_-_87370795_87370829	0.0795183	HOX{A6,A7,B6,B7}.p2	NM_007591|Calr|12317|calreticulin
mm9_v1_chr9_-_44773594_44773682	0.0794918	HOX{A6,A7,B6,B7}.p2	BC025043|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028721|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC006649|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC021406|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028850|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK172893|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	NM_145400|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm9_v1_chr2_-_70893583_70893669	0.079195	HOX{A6,A7,B6,B7}.p2	BC004636|Mettl8|228019|methyltransferase like 8	AK087927|Mettl8|228019|methyltransferase like 8	BC057960|Mettl8|228019|methyltransferase like 8	AK039461|Mettl8|228019|methyltransferase like 8	AK042669|Mettl8|228019|methyltransferase like 8	DQ093357|Mettl8|228019|methyltransferase like 8	DQ093358|Mettl8|228019|methyltransferase like 8	NM_145524|Mettl8|228019|methyltransferase like 8
mm9_v1_chr6_+_125046576_125046586	0.0790197	HOX{A6,A7,B6,B7}.p2	AK020564|Chd4|107932|chromodomain helicase DNA binding protein 4
mm9_v1_chr17_+_34053120_34053173	0.0787464	HOX{A6,A7,B6,B7}.p2	NM_020625|Zbtb22|81630|zinc finger and BTB domain containing 22	AK157161|Zbtb22|81630|zinc finger and BTB domain containing 22	AK159082|Zbtb22|81630|zinc finger and BTB domain containing 22	AK159789|Zbtb22|81630|zinc finger and BTB domain containing 22	AK155199|Zbtb22|81630|zinc finger and BTB domain containing 22	BC026964|Zbtb22|81630|zinc finger and BTB domain containing 22	BC052154|Zbtb22|81630|zinc finger and BTB domain containing 22
mm9_v1_chr17_+_85357297_85357373	0.0784429	HOX{A6,A7,B6,B7}.p2	AK050170|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK136077|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	NM_001159496|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	NM_011151|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK160653|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK167176|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AK163283|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AJ271836|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform	AJ271833|Ppm1b|19043|protein phosphatase 1B, magnesium dependent, beta isoform
mm9_v1_chr13_-_55463928_55463990	0.0783344	HOX{A6,A7,B6,B7}.p2	AK014384|Lman2|66890|lectin, mannose-binding 2	BC049221|Lman2|66890|lectin, mannose-binding 2	AK129028|Lman2|66890|lectin, mannose-binding 2	AK169401|Lman2|66890|lectin, mannose-binding 2	AK004952|Lman2|66890|lectin, mannose-binding 2	AK028452|Lman2|66890|lectin, mannose-binding 2	AK150383|Lman2|66890|lectin, mannose-binding 2	AK083442|Lman2|66890|lectin, mannose-binding 2	AK166953|Lman2|66890|lectin, mannose-binding 2
mm9_v1_chr8_+_55635683_55635717	0.0781366	HOX{A6,A7,B6,B7}.p2	AK003770|Asb5|76294|ankyrin repeat and SOCs box-containing 5	NM_029569|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC120851|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC132007|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr2_-_157835086_157835095	0.0779964	HOX{A6,A7,B6,B7}.p2	AF332067|Tti1|75425|Tel2 interacting protein 1 homolog (S. pombe)	AF332068|Tti1|75425|Tel2 interacting protein 1 homolog (S. pombe)	BC053067|Tti1|75425|Tel2 interacting protein 1 homolog (S. pombe)	NM_029282|Tti1|75425|Tel2 interacting protein 1 homolog (S. pombe)
mm9_v1_chr5_-_138086925_138086941	0.0777283	HOX{A6,A7,B6,B7}.p2	AK040947|Irs3|16369|insulin receptor substrate 3	AK030311|Irs3|16369|insulin receptor substrate 3	NM_010571|Irs3|16369|insulin receptor substrate 3
mm9_v1_chr5_-_23950969_23951097	0.0775907	HOX{A6,A7,B6,B7}.p2	BC013547|Fastk|66587|Fas-activated serine/threonine kinase	AK052667|Fastk|66587|Fas-activated serine/threonine kinase	AK002552|Fastk|66587|Fas-activated serine/threonine kinase	AK038596|Fastk|66587|Fas-activated serine/threonine kinase	AK151859|Fastk|66587|Fas-activated serine/threonine kinase	AK159751|Fastk|66587|Fas-activated serine/threonine kinase	AK166508|Fastk|66587|Fas-activated serine/threonine kinase	AK167346|Fastk|66587|Fas-activated serine/threonine kinase	AK139374|Fastk|66587|Fas-activated serine/threonine kinase	AK164317|Fastk|66587|Fas-activated serine/threonine kinase	AK152369|Fastk|66587|Fas-activated serine/threonine kinase	NM_023229|Fastk|66587|Fas-activated serine/threonine kinase
mm9_v1_chr3_+_94778652_94778663	0.0774777	HOX{A6,A7,B6,B7}.p2	BC079846|Pi4kb|107650|phosphatidylinositol 4-kinase, catalytic, beta polypeptide	NM_175356|Pi4kb|107650|phosphatidylinositol 4-kinase, catalytic, beta polypeptide	AK053614|Pi4kb|107650|phosphatidylinositol 4-kinase, catalytic, beta polypeptide	AK172074|Pi4kb|107650|phosphatidylinositol 4-kinase, catalytic, beta polypeptide
mm9_v1_chr6_-_21802087_21802170	0.0766015	HOX{A6,A7,B6,B7}.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr8_+_91220965_91221031	0.0764546	HOX{A6,A7,B6,B7}.p2	AK147426|Cyld|74256|cylindromatosis (turban tumor syndrome)	BC042438|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK039054|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr1_+_75518349_75518365	0.0760009	HOX{A6,A7,B6,B7}.p2	AK171989|Stk11ip|71728|serine/threonine kinase 11 interacting protein	BC042403|Stk11ip|71728|serine/threonine kinase 11 interacting protein
mm9_v1_chr11_+_94515080_94515111	0.0759226	HOX{A6,A7,B6,B7}.p2	AK143575|Mrpl27|94064|mitochondrial ribosomal protein L27	BC030074|Mrpl27|94064|mitochondrial ribosomal protein L27	NM_053161|Mrpl27|94064|mitochondrial ribosomal protein L27	BC096568|Mrpl27|94064|mitochondrial ribosomal protein L27	AB049648|Mrpl27|94064|mitochondrial ribosomal protein L27	AK080324|Mrpl27|94064|mitochondrial ribosomal protein L27	AK080329|Mrpl27|94064|mitochondrial ribosomal protein L27
mm9_v1_chr11_-_20612281_20612323	0.0758417	HOX{A6,A7,B6,B7}.p2	AK150458|Aftph|216549|aftiphilin	AK152308|Aftph|216549|aftiphilin	AK152487|Aftph|216549|aftiphilin	AK161532|Aftph|216549|aftiphilin
mm9_v1_chr7_+_117911625_117911719	0.0756583	HOX{A6,A7,B6,B7}.p2	D85596|Ampd3|11717|adenosine monophosphate deaminase 3
mm9_v1_chr5_+_114870772_114870878	0.0756511	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr14_-_55479326_55479326	0.0755645	HOX{A6,A7,B6,B7}.p2	BC094669|Homez|239099|homeodomain leucine zipper-encoding gene	NM_183174|Homez|239099|homeodomain leucine zipper-encoding gene
mm9_v1_chr11_+_116976475_116976498	0.0752823	HOX{A6,A7,B6,B7}.p2	AK047396|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166506|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166507|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_028777|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr1_+_172574662_172574663	0.0751421	HOX{A6,A7,B6,B7}.p2	AK042424|Olfml2b|320078|olfactomedin-like 2B	NM_177068|Olfml2b|320078|olfactomedin-like 2B
mm9_v1_chr11_+_121168199_121168276	0.0746574	HOX{A6,A7,B6,B7}.p2	AK004247|Foxk2|68837|forkhead box K2
mm9_v1_chrX_+_10889059_10889059	0.0744239	HOX{A6,A7,B6,B7}.p2	BC049545|Gm14484|547160|predicted gene 14484	NM_001025260|Gm14484|547160|predicted gene 14484
mm9_v1_chr5_+_137463234_137463356	0.0742138	HOX{A6,A7,B6,B7}.p2	AK053320|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK013195|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK033360|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK157741|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr19_+_42056244_42056262	0.0738499	HOX{A6,A7,B6,B7}.p2	NM_145500|Ubtd1|226122|ubiquitin domain containing 1	AK078479|Ubtd1|226122|ubiquitin domain containing 1
mm9_v1_chr3_-_153573930_153573930	0.0731031	HOX{A6,A7,B6,B7}.p2	NM_001163479|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit
mm9_v1_chr2_+_29917372_29917400	0.0725027	HOX{A6,A7,B6,B7}.p2	AK172327|Set|56086|SET nuclear oncogene	AK014291|Set|56086|SET nuclear oncogene	AK031561|Set|56086|SET nuclear oncogene
mm9_v1_chr2_-_156218547_156218745	0.0720242	HOX{A6,A7,B6,B7}.p2	AK013851|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene	AK136079|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene	AK077867|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene
mm9_v1_chr19_+_46576230_46576286	0.0719355	HOX{A6,A7,B6,B7}.p2	BC082298|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr3_-_97672147_97672234	0.0717991	HOX{A6,A7,B6,B7}.p2	AK141917|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_177145|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr11_+_121282686_121282751	0.0716213	HOX{A6,A7,B6,B7}.p2	NM_181420|Fn3krp|238024|fructosamine 3 kinase related protein	AY360466|Fn3krp|238024|fructosamine 3 kinase related protein	AK034934|Fn3krp|238024|fructosamine 3 kinase related protein	BC032265|Fn3krp|238024|fructosamine 3 kinase related protein
mm9_v1_chr11_+_102050933_102051034	0.0715029	HOX{A6,A7,B6,B7}.p2	AK002966|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	BC069959|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	NM_175935|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr7_+_80885223_80885308	0.0714694	HOX{A6,A7,B6,B7}.p2	BC034069|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr10_+_97069816_97069972	0.0709613	HOX{A6,A7,B6,B7}.p2	AK086197|Kera|16545|keratocan	NM_008438|Kera|16545|keratocan	AF022256|Kera|16545|keratocan	BC114980|Kera|16545|keratocan
mm9_v1_chr1_+_187251960_187252031	0.0707478	HOX{A6,A7,B6,B7}.p2	AK166460|Eprs|107508|glutamyl-prolyl-tRNA synthetase
mm9_v1_chr10_+_80102813_80103107	0.0706345	HOX{A6,A7,B6,B7}.p2	AK180542|Csnk1g2|103236|casein kinase 1, gamma 2	AK182278|Csnk1g2|103236|casein kinase 1, gamma 2	AK184141|Csnk1g2|103236|casein kinase 1, gamma 2	AK184876|Csnk1g2|103236|casein kinase 1, gamma 2	AK013192|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr3_-_116365414_116365594	0.0700873	HOX{A6,A7,B6,B7}.p2	AK135865|Hiat1|15247|hippocampus abundant gene transcript 1	BC118047|Hiat1|15247|hippocampus abundant gene transcript 1	D88315|Hiat1|15247|hippocampus abundant gene transcript 1	AK004779|Hiat1|15247|hippocampus abundant gene transcript 1	AK169626|Hiat1|15247|hippocampus abundant gene transcript 1	AK158838|Hiat1|15247|hippocampus abundant gene transcript 1	NM_008246|Hiat1|15247|hippocampus abundant gene transcript 1
mm9_v1_chr11_+_4537719_4537795	0.0698697	HOX{A6,A7,B6,B7}.p2	AK051387|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK048876|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK148105|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	BC013537|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	NM_029291|Ascc2|75452|activating signal cointegrator 1 complex subunit 2
mm9_v1_chrX_-_50622974_50623027	0.069566	HOX{A6,A7,B6,B7}.p2	AK036417|Fam122b|78755|family with sequence similarity 122, member B	AK044896|Fam122b|78755|family with sequence similarity 122, member B	NM_001166365|Fam122b|78755|family with sequence similarity 122, member B	NM_001166583|Fam122b|78755|family with sequence similarity 122, member B	NM_030167|Fam122b|78755|family with sequence similarity 122, member B
mm9_v1_chr16_-_38713106_38713149	0.0693912	HOX{A6,A7,B6,B7}.p2	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr1_+_75233028_75233040	0.0693013	HOX{A6,A7,B6,B7}.p2	AK156083|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	BC085162|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr19_-_6996189_6996331	0.0692239	HOX{A6,A7,B6,B7}.p2	BC034165|Esrra|26379|estrogen related receptor, alpha	BC138586|Esrra|26379|estrogen related receptor, alpha	BC171958|Esrra|26379|estrogen related receptor, alpha	U85259|Esrra|26379|estrogen related receptor, alpha	AK019222|Esrra|26379|estrogen related receptor, alpha	AK046588|Esrra|26379|estrogen related receptor, alpha	AK156371|Esrra|26379|estrogen related receptor, alpha	NM_007953|Esrra|26379|estrogen related receptor, alpha	BC039774|Esrra|26379|estrogen related receptor, alpha
mm9_v1_chr4_-_108251843_108251953	0.0688895	HOX{A6,A7,B6,B7}.p2	BC025853|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	BC139277|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	BC139305|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	AK169741|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	BC024734|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	AK075925|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	NM_172697|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm9_v1_chr11_-_29447745_29447783	0.0685055	HOX{A6,A7,B6,B7}.p2	BC081446|Rps27a|78294|ribosomal protein S27A	BC096392|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr12_-_92828896_92828926	0.0684074	HOX{A6,A7,B6,B7}.p2	BC117829|Gtf2a1|83602|general transcription factor II A, 1	BC117830|Gtf2a1|83602|general transcription factor II A, 1	AK048711|Gtf2a1|83602|general transcription factor II A, 1	NM_175335|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr10_-_127838240_127838284	0.067755	HOX{A6,A7,B6,B7}.p2	BC028990|Slc39a5|72002|solute carrier family 39 (metal ion transporter), member 5	NM_001136237|Slc39a5|72002|solute carrier family 39 (metal ion transporter), member 5
mm9_v1_chr7_-_97089575_97089723	0.0677401	HOX{A6,A7,B6,B7}.p2	BC083330|l7Rn6|67669|lethal, Chr 7, Rinchik 6	BC003916|l7Rn6|67669|lethal, Chr 7, Rinchik 6	AK012166|l7Rn6|67669|lethal, Chr 7, Rinchik 6	DQ196315|l7Rn6|67669|lethal, Chr 7, Rinchik 6	DQ196316|l7Rn6|67669|lethal, Chr 7, Rinchik 6	AK002306|l7Rn6|67669|lethal, Chr 7, Rinchik 6	NM_026304|l7Rn6|67669|lethal, Chr 7, Rinchik 6	AK003324|l7Rn6|67669|lethal, Chr 7, Rinchik 6	AK008604|l7Rn6|67669|lethal, Chr 7, Rinchik 6
mm9_v1_chr12_-_40764554_40764600	0.0676868	HOX{A6,A7,B6,B7}.p2	NM_001039515|Arl4a|11861|ADP-ribosylation factor-like 4A	AK161281|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr5_+_31191224_31191333	0.0673709	HOX{A6,A7,B6,B7}.p2	AK029676|Agbl5|231093|ATP/GTP binding protein-like 5	NM_174849|Agbl5|231093|ATP/GTP binding protein-like 5	AK044195|Agbl5|231093|ATP/GTP binding protein-like 5	AK083656|Agbl5|231093|ATP/GTP binding protein-like 5
mm9_v1_chr1_-_192803077_192803174	0.0667003	HOX{A6,A7,B6,B7}.p2	BC024141|Vash2|226841|vasohibin 2	AK163193|Vash2|226841|vasohibin 2	AK045261|Vash2|226841|vasohibin 2	AK078596|Vash2|226841|vasohibin 2
mm9_v1_chr1_-_55084321_55084327	0.0666047	HOX{A6,A7,B6,B7}.p2	NM_031179|Sf3b1|81898|splicing factor 3b, subunit 1	AB037890|Sf3b1|81898|splicing factor 3b, subunit 1	AK165992|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr8_+_114061310_114061413	0.0652068	HOX{A6,A7,B6,B7}.p2	AK078819|Znrf1|170737|zinc and ring finger 1	AK076756|Znrf1|170737|zinc and ring finger 1	AK216619|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr11_-_70501586_70501625	0.0649354	HOX{A6,A7,B6,B7}.p2	NM_001190376|Camta2|216874|calmodulin binding transcription activator 2	NM_001190378|Camta2|216874|calmodulin binding transcription activator 2	NM_001190379|Camta2|216874|calmodulin binding transcription activator 2	NM_178116|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr5_-_138125909_138125964	0.0647549	HOX{A6,A7,B6,B7}.p2	BC003330|Agfg2|231801|ArfGAP with FG repeats 2	NM_145566|Agfg2|231801|ArfGAP with FG repeats 2	AK171048|Agfg2|231801|ArfGAP with FG repeats 2
mm9_v1_chr14_-_122864879_122864880	0.0646297	HOX{A6,A7,B6,B7}.p2	NM_022987|Zic5|65100|zinc finger protein of the cerebellum 5	AB042155|Zic5|65100|zinc finger protein of the cerebellum 5
mm9_v1_chr9_+_92437056_92437289	0.0645029	HOX{A6,A7,B6,B7}.p2	AK046364|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_001142916|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_011961|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK033363|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK157207|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK042433|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	BC021352|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AF080572|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr15_+_80085923_80086003	0.0644951	HOX{A6,A7,B6,B7}.p2	AK146193|Atf4|11911|activating transcription factor 4	AK144777|Atf4|11911|activating transcription factor 4	AK155254|Atf4|11911|activating transcription factor 4	AK138657|Atf4|11911|activating transcription factor 4	AK150231|Atf4|11911|activating transcription factor 4	X61507|Atf4|11911|activating transcription factor 4	AK156298|Atf4|11911|activating transcription factor 4	M94087|Atf4|11911|activating transcription factor 4	BC031542|Atf4|11911|activating transcription factor 4	AK157839|Atf4|11911|activating transcription factor 4	AK195416|Atf4|11911|activating transcription factor 4
mm9_v1_chr14_-_33278035_33278035	0.0640716	HOX{A6,A7,B6,B7}.p2	AK158592|Slc18a3|20508|solute carrier family 18 (vesicular monoamine), member 3	NM_021712|Slc18a3|20508|solute carrier family 18 (vesicular monoamine), member 3
mm9_v1_chr17_-_40379205_40379215	0.063957	HOX{A6,A7,B6,B7}.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr16_-_21947543_21947585	0.0637474	HOX{A6,A7,B6,B7}.p2	AK160292|Tmem41a|66664|transmembrane protein 41a	BC019770|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr18_-_3299475_3299553	0.0637107	HOX{A6,A7,B6,B7}.p2	AK076797|Crem|12916|cAMP responsive element modulator	NM_001110853|Crem|12916|cAMP responsive element modulator	AK016156|Crem|12916|cAMP responsive element modulator	AK015641|Crem|12916|cAMP responsive element modulator
mm9_v1_chr17_-_57199014_57199114	0.0636098	HOX{A6,A7,B6,B7}.p2	AK206310|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AK158821|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr5_-_115608123_115608152	0.0631753	HOX{A6,A7,B6,B7}.p2	BC058245|Mlec|109154|malectin	BC035300|Mlec|109154|malectin
mm9_v1_chr12_+_56404272_56404278	0.0628875	HOX{A6,A7,B6,B7}.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr2_-_6466116_6466118	0.0628228	HOX{A6,A7,B6,B7}.p2	AK134815|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr6_+_120314442_120314515	0.0627427	HOX{A6,A7,B6,B7}.p2	BC080691|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK133589|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK154025|Kdm5a|214899|lysine (K)-specific demethylase 5A	BC010717|Kdm5a|214899|lysine (K)-specific demethylase 5A
mm9_v1_chr5_+_138635541_138635706	0.0627001	HOX{A6,A7,B6,B7}.p2	AK049381|Mblac1|330216|metallo-beta-lactamase domain containing 1	NM_177878|Mblac1|330216|metallo-beta-lactamase domain containing 1	BC038925|Mblac1|330216|metallo-beta-lactamase domain containing 1
mm9_v1_chr8_-_113783097_113783143	0.0624328	HOX{A6,A7,B6,B7}.p2	BC021306|Glg1|20340|golgi apparatus protein 1	NM_009149|Glg1|20340|golgi apparatus protein 1	X84037|Glg1|20340|golgi apparatus protein 1	AK154581|Glg1|20340|golgi apparatus protein 1
mm9_v1_chr11_-_106077568_106077625	0.0623487	HOX{A6,A7,B6,B7}.p2	BC120502|Ccdc47|67163|coiled-coil domain containing 47	BC137681|Ccdc47|67163|coiled-coil domain containing 47	AK011882|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr18_+_35713033_35713097	0.0621456	HOX{A6,A7,B6,B7}.p2	AK012754|Matr3|17184|matrin 3	AK041908|Matr3|17184|matrin 3	AK080350|Matr3|17184|matrin 3
mm9_v1_chr12_-_29320801_29320817	0.0620033	HOX{A6,A7,B6,B7}.p2	NM_011300|Rps7|20115|ribosomal protein S7
mm9_v1_chr1_-_31006599_31006606	0.0616557	HOX{A6,A7,B6,B7}.p2	AK148288|Ptp4a1|19243|protein tyrosine phosphatase 4a1	NM_011200|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr1_-_13364092_13364163	0.0616344	HOX{A6,A7,B6,B7}.p2	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chr5_-_24606229_24606247	0.0613426	HOX{A6,A7,B6,B7}.p2	BC015283|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr4_+_148478290_148478305	0.061246	HOX{A6,A7,B6,B7}.p2	AK079634|Dffa|13347|DNA fragmentation factor, alpha subunit	BC058213|Dffa|13347|DNA fragmentation factor, alpha subunit
mm9_v1_chr13_-_21494549_21494625	0.0612395	HOX{A6,A7,B6,B7}.p2	BC007473|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK031286|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK031080|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK050028|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK028902|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	NM_001145778|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	NM_023685|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3
mm9_v1_chr10_-_117732093_117732093	0.0610478	HOX{A6,A7,B6,B7}.p2	AJ249492|Iltifb|116849|interleukin 10-related T cell-derived inducible factor beta	NM_054079|Iltifb|116849|interleukin 10-related T cell-derived inducible factor beta
mm9_v1_chr2_+_69560861_69560899	0.0606136	HOX{A6,A7,B6,B7}.p2	BC016126|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC048905|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr2_-_32306938_32306989	0.0606001	HOX{A6,A7,B6,B7}.p2	BC037109|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK132204|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK082756|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK049392|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164357|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_146118|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr8_+_48072271_48072307	0.0604979	HOX{A6,A7,B6,B7}.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr8_+_113142480_113142625	0.0604788	HOX{A6,A7,B6,B7}.p2	AK084520|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171577|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK031952|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK043319|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK140191|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171883|Vac14|234729|Vac14 homolog (S. cerevisiae)	BC052199|Vac14|234729|Vac14 homolog (S. cerevisiae)	NM_146216|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK046826|Vac14|234729|Vac14 homolog (S. cerevisiae)
mm9_v1_chr9_-_21889841_21889883	0.0604727	HOX{A6,A7,B6,B7}.p2	BC004583|Ecsit|26940|ECSIT homolog (Drosophila)	AK007564|Ecsit|26940|ECSIT homolog (Drosophila)	AK012835|Ecsit|26940|ECSIT homolog (Drosophila)
mm9_v1_chr1_-_109057687_109057690	0.0601631	HOX{A6,A7,B6,B7}.p2	BC099584|Serpinb3b|383548|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B	AK003220|Serpinb3b|383548|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B	NM_198680|Serpinb3b|383548|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B
mm9_v1_chr9_-_44059496_44059546	0.0601083	HOX{A6,A7,B6,B7}.p2	AF334612|Pdzd3|170761|PDZ domain containing 3	AK052748|Pdzd3|170761|PDZ domain containing 3	NM_133226|Pdzd3|170761|PDZ domain containing 3
mm9_v1_chr10_+_128184908_128185017	0.0594373	HOX{A6,A7,B6,B7}.p2	NM_030100|Wibg|78428|within bgcn homolog (Drosophila)	AK020702|Wibg|78428|within bgcn homolog (Drosophila)	AJ459407|Wibg|78428|within bgcn homolog (Drosophila)
mm9_v1_chr2_-_80287781_80287882	0.0592004	HOX{A6,A7,B6,B7}.p2	U91905|Frzb|20378|frizzled-related protein
mm9_v1_chr3_+_89070473_89070560	0.0580082	HOX{A6,A7,B6,B7}.p2	AK003223|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	NM_026767|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	BC037761|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3
mm9_v1_chr7_-_23628623_23628623	0.0578169	HOX{A6,A7,B6,B7}.p2	NM_001166758|Vmn1r159|670857|vomeronasal 1 receptor 159
mm9_v1_chr15_+_80541675_80541764	0.057755	HOX{A6,A7,B6,B7}.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr4_+_48292631_48292673	0.0576939	HOX{A6,A7,B6,B7}.p2	AK040307|Invs|16348|inversin	AK019896|Invs|16348|inversin	AK158766|Invs|16348|inversin	NM_010569|Invs|16348|inversin
mm9_v1_chr12_+_56404242_56404258	0.0576496	HOX{A6,A7,B6,B7}.p2	AK031144|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene	AK045434|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr11_+_101017197_101017233	0.0569134	HOX{A6,A7,B6,B7}.p2	NM_134028|Tubg2|103768|tubulin, gamma 2	BC019652|Tubg2|103768|tubulin, gamma 2	BC078446|Tubg2|103768|tubulin, gamma 2
mm9_v1_chr8_+_93593971_93593997	0.056614	HOX{A6,A7,B6,B7}.p2	AK155256|Rbl2|19651|retinoblastoma-like 2	NM_011250|Rbl2|19651|retinoblastoma-like 2	AK142172|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr19_-_29887442_29887463	0.0563524	HOX{A6,A7,B6,B7}.p2	BC056759|Ranbp6|240614|RAN binding protein 6	AK044143|Ranbp6|240614|RAN binding protein 6	BC139395|Ranbp6|240614|RAN binding protein 6	BC139396|Ranbp6|240614|RAN binding protein 6	NM_177721|Ranbp6|240614|RAN binding protein 6
mm9_v1_chr1_+_184339297_184339311	0.056218	HOX{A6,A7,B6,B7}.p2	NM_173378|Trp53bp2|209456|transformation related protein 53 binding protein 2
mm9_v1_chrX_-_54646073_54646213	0.0561772	HOX{A6,A7,B6,B7}.p2	AK207357|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237846|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237847|Rbmx|19655|RNA binding motif protein, X chromosome	AK165006|Rbmx|19655|RNA binding motif protein, X chromosome	BC003710|Rbmx|19655|RNA binding motif protein, X chromosome	AK083899|Rbmx|19655|RNA binding motif protein, X chromosome	AK135164|Rbmx|19655|RNA binding motif protein, X chromosome	NM_001166623|Rbmx|19655|RNA binding motif protein, X chromosome	NM_011252|Rbmx|19655|RNA binding motif protein, X chromosome
mm9_v1_chr5_-_102093635_102093729	0.0560907	HOX{A6,A7,B6,B7}.p2	BC138019|Nkx6-1|18096|NK6 homeobox 1	BC138020|Nkx6-1|18096|NK6 homeobox 1	AF357883|Nkx6-1|18096|NK6 homeobox 1	NM_144955|Nkx6-1|18096|NK6 homeobox 1
mm9_v1_chr11_-_69495203_69495445	0.0560469	HOX{A6,A7,B6,B7}.p2	AY008764|Senp3|80886|SUMO/sentrin specific peptidase 3	BC037014|Senp3|80886|SUMO/sentrin specific peptidase 3	AK045071|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr8_+_93594007_93594009	0.0560023	HOX{A6,A7,B6,B7}.p2	BC020528|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr5_-_39267928_39268050	0.0559515	HOX{A6,A7,B6,B7}.p2	BC125637|Clnk|27278|cytokine-dependent hematopoietic cell linker	BC125639|Clnk|27278|cytokine-dependent hematopoietic cell linker	AF187819|Clnk|27278|cytokine-dependent hematopoietic cell linker	NM_013748|Clnk|27278|cytokine-dependent hematopoietic cell linker	AB021220|Clnk|27278|cytokine-dependent hematopoietic cell linker
mm9_v1_chr6_-_30846696_30846797	0.055317	HOX{A6,A7,B6,B7}.p2	AF205065|Copg2|54160|coatomer protein complex, subunit gamma 2	AK079599|Copg2|54160|coatomer protein complex, subunit gamma 2	AK178636|Copg2|54160|coatomer protein complex, subunit gamma 2	AK186993|Copg2|54160|coatomer protein complex, subunit gamma 2	AK149462|Copg2|54160|coatomer protein complex, subunit gamma 2	BC145898|Copg2|54160|coatomer protein complex, subunit gamma 2	BC145900|Copg2|54160|coatomer protein complex, subunit gamma 2	AK147943|Copg2|54160|coatomer protein complex, subunit gamma 2	BC049178|Copg2|54160|coatomer protein complex, subunit gamma 2	NM_017478|Copg2|54160|coatomer protein complex, subunit gamma 2	AK163668|Copg2|54160|coatomer protein complex, subunit gamma 2	AJ251067|Copg2|54160|coatomer protein complex, subunit gamma 2	AK088492|Copg2|54160|coatomer protein complex, subunit gamma 2
mm9_v1_chr4_-_155243505_155243560	0.0549397	HOX{A6,A7,B6,B7}.p2	AK089229|Gltpd1|79554|glycolipid transfer protein domain containing 1	AK040664|Gltpd1|79554|glycolipid transfer protein domain containing 1	NM_024472|Gltpd1|79554|glycolipid transfer protein domain containing 1
mm9_v1_chr9_-_110848570_110848661	0.0549359	HOX{A6,A7,B6,B7}.p2	M87321|Tdgf1|21667|teratocarcinoma-derived growth factor 1	BC052646|Tdgf1|21667|teratocarcinoma-derived growth factor 1	AK133730|Tdgf1|21667|teratocarcinoma-derived growth factor 1	AK163969|Tdgf1|21667|teratocarcinoma-derived growth factor 1	NM_011562|Tdgf1|21667|teratocarcinoma-derived growth factor 1
mm9_v1_chr3_+_88357635_88357640	0.0545122	HOX{A6,A7,B6,B7}.p2	AB040050|Ubqln4|94232|ubiquilin 4	NM_033526|Ubqln4|94232|ubiquilin 4
mm9_v1_chr9_+_44446796_44446798	0.0540675	HOX{A6,A7,B6,B7}.p2	AK156303|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr19_+_5637459_5637550	0.0540079	HOX{A6,A7,B6,B7}.p2	AK155321|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK158072|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	BC094053|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	NM_009045|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chrX_-_91457986_91458033	0.0535807	HOX{A6,A7,B6,B7}.p2	AK128949|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK171317|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC063755|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139234|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139235|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	NM_012010|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK165866|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK150095|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK146900|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr7_-_134160841_134160854	0.0533851	HOX{A6,A7,B6,B7}.p2	AK013840|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr11_-_75236012_75236016	0.0526341	HOX{A6,A7,B6,B7}.p2	D87975|Serpinf1|20317|serine (or cysteine) peptidase inhibitor, clade F, member 1	AF036164|Serpinf1|20317|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm9_v1_chrX_-_16896428_16896493	0.0524583	HOX{A6,A7,B6,B7}.p2	BC120659|Efhc2|74405|EF-hand domain (C-terminal) containing 2	BC125625|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK016714|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK029501|Efhc2|74405|EF-hand domain (C-terminal) containing 2	NM_028916|Efhc2|74405|EF-hand domain (C-terminal) containing 2
mm9_v1_chr14_-_55236828_55236864	0.0522222	HOX{A6,A7,B6,B7}.p2	AF060091|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	NM_011186|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AB003304|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	BC106144|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	BC012246|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AK088367|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AK010441|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AK133839|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5
mm9_v1_chr2_+_127680363_127680363	0.0516929	HOX{A6,A7,B6,B7}.p2	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr2_-_9981155_9981246	0.0511877	HOX{A6,A7,B6,B7}.p2	AK187037|Atp5c1|11949|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
mm9_v1_chr14_+_118536326_118536519	0.0509113	HOX{A6,A7,B6,B7}.p2	NM_021434|Gpr180|58245|G protein-coupled receptor 180	AK169908|Gpr180|58245|G protein-coupled receptor 180	AB041545|Gpr180|58245|G protein-coupled receptor 180	AK170316|Gpr180|58245|G protein-coupled receptor 180	BC055726|Gpr180|58245|G protein-coupled receptor 180	AK053422|Gpr180|58245|G protein-coupled receptor 180	BC069981|Gpr180|58245|G protein-coupled receptor 180	AK212055|Gpr180|58245|G protein-coupled receptor 180
mm9_v1_chr13_-_36209100_36209228	0.050773	HOX{A6,A7,B6,B7}.p2	BC080772|Lyrm4|380840|LYR motif containing 4	BC034664|Lyrm4|380840|LYR motif containing 4	AK050553|Lyrm4|380840|LYR motif containing 4	NM_201358|Lyrm4|380840|LYR motif containing 4
mm9_v1_chr8_+_95198187_95198300	0.0503644	HOX{A6,A7,B6,B7}.p2	AK035140|Irx6|64379|Iroquois related homeobox 6 (Drosophila)	AK053729|Irx6|64379|Iroquois related homeobox 6 (Drosophila)	NM_022428|Irx6|64379|Iroquois related homeobox 6 (Drosophila)
mm9_v1_chr19_-_5424856_5425071	0.0501651	HOX{A6,A7,B6,B7}.p2	BC002090|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	NM_024176|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	AK010152|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm9_v1_chr5_-_87997908_87998005	0.0499026	HOX{A6,A7,B6,B7}.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chrX_+_97821403_97821491	0.0497992	HOX{A6,A7,B6,B7}.p2	NM_008446|Kif4|16571|kinesin family member 4	AK084837|Kif4|16571|kinesin family member 4	AK135179|Kif4|16571|kinesin family member 4	BC050946|Kif4|16571|kinesin family member 4	BC054537|Kif4|16571|kinesin family member 4	AK171938|Kif4|16571|kinesin family member 4
mm9_v1_chr18_-_35113903_35113993	0.0496876	HOX{A6,A7,B6,B7}.p2	AK002634|Hspa9|15526|heat shock protein 9	AK004946|Hspa9|15526|heat shock protein 9	AK137109|Hspa9|15526|heat shock protein 9	D17556|Hspa9|15526|heat shock protein 9	L06896|Hspa9|15526|heat shock protein 9	D11089|Hspa9|15526|heat shock protein 9
mm9_v1_chr11_+_103828032_103828117	0.049151	HOX{A6,A7,B6,B7}.p2	AK042977|Arf2|11841|ADP-ribosylation factor 2	AK077591|Arf2|11841|ADP-ribosylation factor 2	AK167653|Arf2|11841|ADP-ribosylation factor 2	AK167601|Arf2|11841|ADP-ribosylation factor 2	AK167133|Arf2|11841|ADP-ribosylation factor 2	AK169094|Arf2|11841|ADP-ribosylation factor 2	AK169412|Arf2|11841|ADP-ribosylation factor 2	D87899|Arf2|11841|ADP-ribosylation factor 2	AK031259|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chrX_-_91787317_91787335	0.0490808	HOX{A6,A7,B6,B7}.p2	BC016438|Maged1|94275|melanoma antigen, family D, 1	AK017275|Maged1|94275|melanoma antigen, family D, 1	AK145872|Maged1|94275|melanoma antigen, family D, 1
mm9_v1_chrX_-_45944937_45944938	0.0489854	HOX{A6,A7,B6,B7}.p2	BC051397|Zfp280c|208968|zinc finger protein 280C	NM_001166650|Zfp280c|208968|zinc finger protein 280C	BC028839|Zfp280c|208968|zinc finger protein 280C
mm9_v1_chr5_-_115608087_115608107	0.0489838	HOX{A6,A7,B6,B7}.p2	AK129066|Mlec|109154|malectin
mm9_v1_chr17_+_88929444_88929477	0.0488982	HOX{A6,A7,B6,B7}.p2	NM_028658|Klraq1|73825|KLRAQ motif containing 1
mm9_v1_chr1_-_64784316_64784324	0.0487492	HOX{A6,A7,B6,B7}.p2	AK039402|Fzd5|14367|frizzled homolog 5 (Drosophila)	NM_001042659|Fzd5|14367|frizzled homolog 5 (Drosophila)	NM_022721|Fzd5|14367|frizzled homolog 5 (Drosophila)	AK030111|Fzd5|14367|frizzled homolog 5 (Drosophila)
mm9_v1_chr4_+_97439255_97439362	0.0486182	HOX{A6,A7,B6,B7}.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr2_+_163051189_163051200	0.0483619	HOX{A6,A7,B6,B7}.p2	NM_001098799|Tox2|269389|TOX high mobility group box family member 2
mm9_v1_chr4_-_99495806_99495876	0.0482631	HOX{A6,A7,B6,B7}.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr17_+_47522341_47522420	0.0481921	HOX{A6,A7,B6,B7}.p2	BC031916|Guca1b|107477|guanylate cyclase activator 1B	NM_146079|Guca1b|107477|guanylate cyclase activator 1B	BC033358|Guca1b|107477|guanylate cyclase activator 1B	BC018480|Guca1b|107477|guanylate cyclase activator 1B	AK033052|Guca1b|107477|guanylate cyclase activator 1B	BC031367|Guca1b|107477|guanylate cyclase activator 1B	BC033383|Guca1b|107477|guanylate cyclase activator 1B	BC024810|Guca1b|107477|guanylate cyclase activator 1B	BC029661|Guca1b|107477|guanylate cyclase activator 1B	BC033380|Guca1b|107477|guanylate cyclase activator 1B	BC034595|Guca1b|107477|guanylate cyclase activator 1B	BC033423|Guca1b|107477|guanylate cyclase activator 1B	BC033348|Guca1b|107477|guanylate cyclase activator 1B	BC033364|Guca1b|107477|guanylate cyclase activator 1B	BC033396|Guca1b|107477|guanylate cyclase activator 1B	BC034331|Guca1b|107477|guanylate cyclase activator 1B	BC029017|Guca1b|107477|guanylate cyclase activator 1B	BC018258|Guca1b|107477|guanylate cyclase activator 1B
mm9_v1_chr5_+_48374328_48374415	0.0480598	HOX{A6,A7,B6,B7}.p2	AK053182|Slit2|20563|slit homolog 2 (Drosophila)	AK053913|Slit2|20563|slit homolog 2 (Drosophila)	AK144573|Slit2|20563|slit homolog 2 (Drosophila)	NM_178804|Slit2|20563|slit homolog 2 (Drosophila)	AK084012|Slit2|20563|slit homolog 2 (Drosophila)	AK084293|Slit2|20563|slit homolog 2 (Drosophila)
mm9_v1_chr3_+_94778667_94778675	0.0479531	HOX{A6,A7,B6,B7}.p2	AK028974|Pi4kb|107650|phosphatidylinositol 4-kinase, catalytic, beta polypeptide
mm9_v1_chr3_-_132754703_132754778	0.0475869	HOX{A6,A7,B6,B7}.p2	BC047136|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	NM_026231|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	AK044441|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	AK033409|Gstcd|67553|glutathione S-transferase, C-terminal domain containing	AK037169|Gstcd|67553|glutathione S-transferase, C-terminal domain containing
mm9_v1_chr11_+_114588725_114588725	0.047537	HOX{A6,A7,B6,B7}.p2	NM_001034878|Dnaic2|432611|dynein, axonemal, intermediate chain 2
mm9_v1_chr18_-_35113995_35113999	0.0473679	HOX{A6,A7,B6,B7}.p2	AK030299|Hspa9|15526|heat shock protein 9	AK145965|Hspa9|15526|heat shock protein 9	AK167856|Hspa9|15526|heat shock protein 9
mm9_v1_chr12_+_3426883_3427022	0.0471156	HOX{A6,A7,B6,B7}.p2	AK080679|Asxl2|75302|additional sex combs like 2 (Drosophila)	NM_172421|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK036839|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK142135|Asxl2|75302|additional sex combs like 2 (Drosophila)	BC141140|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chr11_-_75268137_75268225	0.0470969	HOX{A6,A7,B6,B7}.p2	NM_138950|Wdr81|192652|WD repeat domain 81
mm9_v1_chr3_+_89195758_89195785	0.0469364	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chr16_-_4879787_4879850	0.0465308	HOX{A6,A7,B6,B7}.p2	BC013706|Fam100a|207740|family with sequence similarity 100, member A	BC064081|Fam100a|207740|family with sequence similarity 100, member A	BC056472|Fam100a|207740|family with sequence similarity 100, member A	AK005316|Fam100a|207740|family with sequence similarity 100, member A	NM_145359|Fam100a|207740|family with sequence similarity 100, member A
mm9_v1_chr11_+_97888237_97888268	0.0464649	HOX{A6,A7,B6,B7}.p2	NM_009078|Rpl19|19921|ribosomal protein L19	AK168232|Rpl19|19921|ribosomal protein L19	AK168481|Rpl19|19921|ribosomal protein L19
mm9_v1_chr15_-_76476688_76476767	0.0461411	HOX{A6,A7,B6,B7}.p2	AK028994|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr7_-_28835041_28835115	0.045503	HOX{A6,A7,B6,B7}.p2	BC012708|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167041|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	BC092265|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	L76223|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK150989|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160718|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167528|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169224|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK077507|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160644|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169244|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK050677|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK153991|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	NM_011874|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm9_v1_chr16_-_78576914_78576958	0.0454316	HOX{A6,A7,B6,B7}.p2	AK044670|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr4_+_33397279_33397404	0.0453056	HOX{A6,A7,B6,B7}.p2	AK151463|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	NM_011884|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK150497|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160007|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK002922|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK079488|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK142016|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160706|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	BC043657|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK169305|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF034568|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF025653|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase
mm9_v1_chr9_-_24578197_24578288	0.0452789	HOX{A6,A7,B6,B7}.p2	AJ277486|Tbx20|57246|T-box 20
mm9_v1_chr2_+_172298047_172298053	0.0450278	HOX{A6,A7,B6,B7}.p2	AK006503|1700029J11Rik|76426|RIKEN cDNA 1700029J11 gene	BC137932|1700029J11Rik|76426|RIKEN cDNA 1700029J11 gene	BC137933|1700029J11Rik|76426|RIKEN cDNA 1700029J11 gene	NM_029608|1700029J11Rik|76426|RIKEN cDNA 1700029J11 gene
mm9_v1_chr9_-_119002573_119002594	0.0448214	HOX{A6,A7,B6,B7}.p2	BC015249|Plcd1|18799|phospholipase C, delta 1	BC025798|Plcd1|18799|phospholipase C, delta 1
mm9_v1_chr11_+_43287820_43287845	0.0447113	HOX{A6,A7,B6,B7}.p2	NM_026979|C1qtnf2|69183|C1q and tumor necrosis factor related protein 2
mm9_v1_chr15_-_80390899_80390899	0.0446858	HOX{A6,A7,B6,B7}.p2	BC158112|Enthd1|383075|ENTH domain containing 1	NM_001163189|Enthd1|383075|ENTH domain containing 1
mm9_v1_chr17_-_36106668_36106727	0.0443971	HOX{A6,A7,B6,B7}.p2	BC046965|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	BC032250|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	BC063094|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	NM_013854|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	AK077741|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1
mm9_v1_chr12_-_70891641_70891693	0.0443679	HOX{A6,A7,B6,B7}.p2	BC115909|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	BC118055|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	AK016781|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)	NM_183294|Cdkl1|71091|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm9_v1_chr9_-_104028940_104028972	0.0441109	HOX{A6,A7,B6,B7}.p2	BC110556|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	BC140999|Ccrl1|252837|chemokine (C-C motif) receptor-like 1	NM_145700|Ccrl1|252837|chemokine (C-C motif) receptor-like 1
mm9_v1_chr8_-_91568060_91568092	0.0439245	HOX{A6,A7,B6,B7}.p2	BC062937|Sall1|58198|sal-like 1 (Drosophila)	NM_021390|Sall1|58198|sal-like 1 (Drosophila)
mm9_v1_chr11_+_109511476_109511595	0.0438885	HOX{A6,A7,B6,B7}.p2	AK158562|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha
mm9_v1_chr4_-_149112082_149112163	0.0437693	HOX{A6,A7,B6,B7}.p2	AK079157|Tmem201|230917|transmembrane protein 201	AK078532|Tmem201|230917|transmembrane protein 201	AK039221|Tmem201|230917|transmembrane protein 201	BC072645|Tmem201|230917|transmembrane protein 201	NM_001025106|Tmem201|230917|transmembrane protein 201	NM_177672|Tmem201|230917|transmembrane protein 201	AK086543|Tmem201|230917|transmembrane protein 201	AK153631|Tmem201|230917|transmembrane protein 201
mm9_v1_chr9_+_113885162_113885169	0.0434884	HOX{A6,A7,B6,B7}.p2	AK087783|Ubp1|22221|upstream binding protein 1
mm9_v1_chr18_+_39152776_39152837	0.0434881	HOX{A6,A7,B6,B7}.p2	AK011368|Arhgap26|71302|Rho GTPase activating protein 26	NM_175164|Arhgap26|71302|Rho GTPase activating protein 26
mm9_v1_chr13_+_91062722_91062758	0.0434743	HOX{A6,A7,B6,B7}.p2	NM_024175|Rps23|66475|ribosomal protein S23	AK166994|Rps23|66475|ribosomal protein S23	AK010667|Rps23|66475|ribosomal protein S23
mm9_v1_chr18_-_35114000_35114003	0.0433454	HOX{A6,A7,B6,B7}.p2	AK165958|Hspa9|15526|heat shock protein 9
mm9_v1_chr15_-_95485136_95485201	0.0432211	HOX{A6,A7,B6,B7}.p2	AK034882|Dbx2|223843|developing brain homeobox 2	NM_207533|Dbx2|223843|developing brain homeobox 2
mm9_v1_chr4_+_128404814_128404885	0.0431477	HOX{A6,A7,B6,B7}.p2	NM_001195083|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC051657|Phc2|54383|polyhomeotic-like 2 (Drosophila)	AB062362|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC071246|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr13_+_59686602_59686637	0.0430547	HOX{A6,A7,B6,B7}.p2	AK021042|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chrX_+_99044723_99044723	0.0430543	HOX{A6,A7,B6,B7}.p2	AK142977|Nhsl2|100042480|NHS-like 2	NM_001163610|Nhsl2|100042480|NHS-like 2
mm9_v1_chr7_+_138703898_138703948	0.042794	HOX{A6,A7,B6,B7}.p2	AK088534|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK138004|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	NM_009774|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	U67327|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	BC086790|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK190618|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr17_-_32487506_32487542	0.0425738	HOX{A6,A7,B6,B7}.p2	BC046801|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	AB028921|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	BC062877|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	BC051015|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	NM_017476|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	AK011325|Akap8l|54194|A kinase (PRKA) anchor protein 8-like	AK166526|Akap8l|54194|A kinase (PRKA) anchor protein 8-like
mm9_v1_chr3_+_103718466_103718512	0.042076	HOX{A6,A7,B6,B7}.p2	AK138603|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC069993|Rsbn1|229675|rosbin, round spermatid basic protein 1	AK122577|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC094667|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr11_-_99982369_99982477	0.0417892	HOX{A6,A7,B6,B7}.p2	AK009677|Krt13|16663|keratin 13	X03492|Krt13|16663|keratin 13
mm9_v1_chr5_+_111759771_111759826	0.0416955	HOX{A6,A7,B6,B7}.p2	AK028235|Pitpnb|56305|phosphatidylinositol transfer protein, beta	NM_019640|Pitpnb|56305|phosphatidylinositol transfer protein, beta	U46934|Pitpnb|56305|phosphatidylinositol transfer protein, beta	BC034676|Pitpnb|56305|phosphatidylinositol transfer protein, beta
mm9_v1_chr5_+_31829364_31829413	0.0416025	HOX{A6,A7,B6,B7}.p2	AK149108|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	NM_009206|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	AK160250|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	BC072588|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	AK138398|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein
mm9_v1_chr14_+_55045740_55045780	0.0415741	HOX{A6,A7,B6,B7}.p2	AK004194|Mrpl52|68836|mitochondrial ribosomal protein L52	NM_026851|Mrpl52|68836|mitochondrial ribosomal protein L52	AK150806|Mrpl52|68836|mitochondrial ribosomal protein L52	AK151615|Mrpl52|68836|mitochondrial ribosomal protein L52	AK164629|Mrpl52|68836|mitochondrial ribosomal protein L52	AK081551|Mrpl52|68836|mitochondrial ribosomal protein L52	BC028522|Mrpl52|68836|mitochondrial ribosomal protein L52	AK152876|Mrpl52|68836|mitochondrial ribosomal protein L52
mm9_v1_chr13_-_29947456_29947544	0.0413972	HOX{A6,A7,B6,B7}.p2	BC016073|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	NM_144536|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK158546|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK041864|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK018346|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK169761|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK082629|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK045506|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1
mm9_v1_chr11_+_98308333_98308404	0.0411381	HOX{A6,A7,B6,B7}.p2	AK145996|Grb7|14786|growth factor receptor bound protein 7	BC081547|Grb7|14786|growth factor receptor bound protein 7	AK168438|Grb7|14786|growth factor receptor bound protein 7	AK220277|Grb7|14786|growth factor receptor bound protein 7	BC003295|Grb7|14786|growth factor receptor bound protein 7
mm9_v1_chr2_+_152512797_152512937	0.0406269	HOX{A6,A7,B6,B7}.p2	AK010255|Mcts2|66405|malignant T cell amplified sequence 2	NM_025543|Mcts2|66405|malignant T cell amplified sequence 2	BC027507|Mcts2|66405|malignant T cell amplified sequence 2	AK002563|Mcts2|66405|malignant T cell amplified sequence 2	AK028001|Mcts2|66405|malignant T cell amplified sequence 2
mm9_v1_chr5_-_148211881_148212064	0.0405906	HOX{A6,A7,B6,B7}.p2	AK149292|Flt3|14255|FMS-like tyrosine kinase 3	AK045865|Flt3|14255|FMS-like tyrosine kinase 3	X59398|Flt3|14255|FMS-like tyrosine kinase 3	AK163640|Flt3|14255|FMS-like tyrosine kinase 3	NM_010229|Flt3|14255|FMS-like tyrosine kinase 3
mm9_v1_chr7_-_74790088_74790121	0.0405094	HOX{A6,A7,B6,B7}.p2	AK004904|Lrrc28|67867|leucine rich repeat containing 28	AK008713|Lrrc28|67867|leucine rich repeat containing 28	AK159417|Lrrc28|67867|leucine rich repeat containing 28	AK050154|Lrrc28|67867|leucine rich repeat containing 28	AK077270|Lrrc28|67867|leucine rich repeat containing 28	NM_027413|Lrrc28|67867|leucine rich repeat containing 28	NM_175124|Lrrc28|67867|leucine rich repeat containing 28
mm9_v1_chr14_+_105657949_105657967	0.0402646	HOX{A6,A7,B6,B7}.p2	AK132235|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr6_+_127396847_127396857	0.0401996	HOX{A6,A7,B6,B7}.p2	AK151393|Parp11|101187|poly (ADP-ribose) polymerase family, member 11
mm9_v1_chr4_+_45696460_45696460	0.0400841	HOX{A6,A7,B6,B7}.p2	AK147771|Gm829|329839|predicted gene 829	NM_001033412|Gm829|329839|predicted gene 829
mm9_v1_chr18_-_43952520_43952536	0.0399449	HOX{A6,A7,B6,B7}.p2	BC147098|Gm94|225443|predicted gene 94	BC147099|Gm94|225443|predicted gene 94	BC171995|Gm94|225443|predicted gene 94	AK131908|Gm94|225443|predicted gene 94	AK131907|Gm94|225443|predicted gene 94	NM_001033280|Gm94|225443|predicted gene 94
mm9_v1_chr4_+_100449274_100449299	0.0397951	HOX{A6,A7,B6,B7}.p2	AK080923|Cachd1|320508|cache domain containing 1	BC058676|Cachd1|320508|cache domain containing 1	NM_198037|Cachd1|320508|cache domain containing 1
mm9_v1_chr16_-_21947587_21947627	0.0396995	HOX{A6,A7,B6,B7}.p2	AK013518|Tmem41a|66664|transmembrane protein 41a	BC011512|Tmem41a|66664|transmembrane protein 41a	AK007685|Tmem41a|66664|transmembrane protein 41a	NM_025693|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr2_-_130250376_130250436	0.0396028	HOX{A6,A7,B6,B7}.p2	NM_001114541|Fam113a|319513|family with sequence similarity 113, member A	BC064802|Fam113a|319513|family with sequence similarity 113, member A	AK031469|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr4_-_25208902_25208983	0.0393928	HOX{A6,A7,B6,B7}.p2	AK032663|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC058809|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK129211|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK007993|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK076206|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC132195|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC138153|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK132697|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC080203|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC099529|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	NM_026194|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene
mm9_v1_chr9_+_44580978_44581111	0.0393788	HOX{A6,A7,B6,B7}.p2	AJ249981|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)	AK005360|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)	AK032880|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)	NM_023831|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)
mm9_v1_chr7_-_110920107_110920107	0.0392519	HOX{A6,A7,B6,B7}.p2	NM_013621|Olfr69|18370|olfactory receptor 69
mm9_v1_chr15_-_99288178_99288178	0.0389172	HOX{A6,A7,B6,B7}.p2	BC072572|Nckap5l|380969|NCK-associated protein 5-like	NM_001001884|Nckap5l|380969|NCK-associated protein 5-like
mm9_v1_chr15_+_80085613_80085722	0.0387858	HOX{A6,A7,B6,B7}.p2	AK003001|Atf4|11911|activating transcription factor 4	NM_009716|Atf4|11911|activating transcription factor 4	BC085169|Atf4|11911|activating transcription factor 4
mm9_v1_chr14_+_55502261_55502285	0.0385458	HOX{A6,A7,B6,B7}.p2	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr1_-_31006461_31006538	0.0384877	HOX{A6,A7,B6,B7}.p2	BC094447|Ptp4a1|19243|protein tyrosine phosphatase 4a1	BC003761|Ptp4a1|19243|protein tyrosine phosphatase 4a1	BC031734|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr8_+_24168730_24168785	0.0384583	HOX{A6,A7,B6,B7}.p2	AK147483|Ank1|11733|ankyrin 1, erythroid	NM_031158|Ank1|11733|ankyrin 1, erythroid	X69063|Ank1|11733|ankyrin 1, erythroid	AK147597|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr1_-_60155312_60155400	0.0377714	HOX{A6,A7,B6,B7}.p2	AB041608|Wdr12|57750|WD repeat domain 12	NM_001199060|Wdr12|57750|WD repeat domain 12
mm9_v1_chr10_-_80363606_80363713	0.0369697	HOX{A6,A7,B6,B7}.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr10_-_92544356_92544371	0.0367546	HOX{A6,A7,B6,B7}.p2	BC115566|4930485B16Rik|380654|RIKEN cDNA 4930485B16 gene	AK053219|4930485B16Rik|380654|RIKEN cDNA 4930485B16 gene	BC115567|4930485B16Rik|380654|RIKEN cDNA 4930485B16 gene
mm9_v1_chr15_-_12669677_12669687	0.0367121	HOX{A6,A7,B6,B7}.p2	AK159017|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr9_-_86775488_86775559	0.0364856	HOX{A6,A7,B6,B7}.p2	AK051176|Snap91|20616|synaptosomal-associated protein 91
mm9_v1_chr17_-_43639675_43639721	0.0363832	HOX{A6,A7,B6,B7}.p2	AK143906|Mep1a|17287|meprin 1 alpha	AK164734|Mep1a|17287|meprin 1 alpha	AK093914|Mep1a|17287|meprin 1 alpha	M74897|Mep1a|17287|meprin 1 alpha	BC015258|Mep1a|17287|meprin 1 alpha	NM_008585|Mep1a|17287|meprin 1 alpha
mm9_v1_chr1_+_158488917_158488917	0.035465	HOX{A6,A7,B6,B7}.p2	NM_001136104|Abl2|11352|v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)	NM_009595|Abl2|11352|v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)
mm9_v1_chr14_-_56503058_56503074	0.0349661	HOX{A6,A7,B6,B7}.p2	AK081085|Cbln3|56410|cerebellin 3 precursor protein	AF218379|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr2_+_163470487_163470585	0.0348346	HOX{A6,A7,B6,B7}.p2	AK002842|0610039K10Rik|68386|RIKEN cDNA 0610039K10 gene
mm9_v1_chr1_-_133421746_133421916	0.0347886	HOX{A6,A7,B6,B7}.p2	BC158055|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC151081|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC151082|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC172152|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2
mm9_v1_chr4_+_22284682_22284762	0.0345991	HOX{A6,A7,B6,B7}.p2	AK028786|Fbxl4|269514|F-box and leucine-rich repeat protein 4	AK032391|Fbxl4|269514|F-box and leucine-rich repeat protein 4	NM_172988|Fbxl4|269514|F-box and leucine-rich repeat protein 4	AK083661|Fbxl4|269514|F-box and leucine-rich repeat protein 4	AK051429|Fbxl4|269514|F-box and leucine-rich repeat protein 4	BC033265|Fbxl4|269514|F-box and leucine-rich repeat protein 4
mm9_v1_chr11_+_70376359_70376411	0.034477	HOX{A6,A7,B6,B7}.p2	NM_001045959|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_001045964|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_016713|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_176893|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB035697|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB041925|Mink1|50932|misshapen-like kinase 1 (zebrafish)
mm9_v1_chr1_+_89110472_89110608	0.0343044	HOX{A6,A7,B6,B7}.p2	AK032965|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	NM_001039170|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	NM_023314|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK018516|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK017221|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	NM_001039169|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	BC049077|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	U01137|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK138055|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK150495|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	BC045153|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AF068116|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2
mm9_v1_chr5_+_150821249_150821339	0.0341352	HOX{A6,A7,B6,B7}.p2	AF346501|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	NM_080468|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC120741|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144802|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144803|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	AK034592|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2
mm9_v1_chr7_+_13063673_13063734	0.0340816	HOX{A6,A7,B6,B7}.p2	AK044645|Zfp606|67370|zinc finger protein 606	AK143200|Zfp606|67370|zinc finger protein 606	AK021179|Zfp606|67370|zinc finger protein 606	AK039817|Zfp606|67370|zinc finger protein 606	AK173278|Zfp606|67370|zinc finger protein 606	AK165095|Zfp606|67370|zinc finger protein 606	BC052747|Zfp606|67370|zinc finger protein 606
mm9_v1_chrX_+_159198302_159198437	0.0338006	HOX{A6,A7,B6,B7}.p2	NM_009031|Rbbp7|245688|retinoblastoma binding protein 7	AK146439|Rbbp7|245688|retinoblastoma binding protein 7	AK147062|Rbbp7|245688|retinoblastoma binding protein 7	AK153913|Rbbp7|245688|retinoblastoma binding protein 7	AK148852|Rbbp7|245688|retinoblastoma binding protein 7	U35142|Rbbp7|245688|retinoblastoma binding protein 7	BC003785|Rbbp7|245688|retinoblastoma binding protein 7	AK076016|Rbbp7|245688|retinoblastoma binding protein 7	AK135779|Rbbp7|245688|retinoblastoma binding protein 7	AK135956|Rbbp7|245688|retinoblastoma binding protein 7	AK078349|Rbbp7|245688|retinoblastoma binding protein 7	AK082892|Rbbp7|245688|retinoblastoma binding protein 7	AK136110|Rbbp7|245688|retinoblastoma binding protein 7	AK145531|Rbbp7|245688|retinoblastoma binding protein 7	AK146014|Rbbp7|245688|retinoblastoma binding protein 7	AK146904|Rbbp7|245688|retinoblastoma binding protein 7	AK146967|Rbbp7|245688|retinoblastoma binding protein 7	AK160023|Rbbp7|245688|retinoblastoma binding protein 7	AK132101|Rbbp7|245688|retinoblastoma binding protein 7	AK145651|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr18_+_84257471_84257589	0.0336709	HOX{A6,A7,B6,B7}.p2	AK083082|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	AK047559|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	AK081988|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	BC116427|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	BC116428|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	NM_146090|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2
mm9_v1_chr3_+_37319188_37319238	0.0334964	HOX{A6,A7,B6,B7}.p2	NM_001163511|Spata5|57815|spermatogenesis associated 5	NM_021343|Spata5|57815|spermatogenesis associated 5	AF049099|Spata5|57815|spermatogenesis associated 5	BC145302|Spata5|57815|spermatogenesis associated 5	BC145309|Spata5|57815|spermatogenesis associated 5	AK011111|Spata5|57815|spermatogenesis associated 5
mm9_v1_chr2_-_151566988_151567015	0.0334802	HOX{A6,A7,B6,B7}.p2	AK078867|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	BC012260|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK032644|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK045891|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK078035|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1
mm9_v1_chr5_-_31829057_31829098	0.0333548	HOX{A6,A7,B6,B7}.p2	BC031447|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like	AK012134|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like
mm9_v1_chrX_-_154036606_154036649	0.032976	HOX{A6,A7,B6,B7}.p2	AK148325|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	NM_172307|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr1_+_20941706_20941814	0.0326351	HOX{A6,A7,B6,B7}.p2	NM_027974|Efhc1|71877|EF-hand domain (C-terminal) containing 1	AK006489|Efhc1|71877|EF-hand domain (C-terminal) containing 1	EU520262|Efhc1|71877|EF-hand domain (C-terminal) containing 1
mm9_v1_chr11_-_101285951_101285970	0.0321138	HOX{A6,A7,B6,B7}.p2	BC057970|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	AK004415|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr2_-_25877230_25877291	0.0319943	HOX{A6,A7,B6,B7}.p2	BC021811|Ubac1|98766|ubiquitin associated domain containing 1	NM_133835|Ubac1|98766|ubiquitin associated domain containing 1
mm9_v1_chr11_-_116167956_116168087	0.0319871	HOX{A6,A7,B6,B7}.p2	AF014461|Exoc7|53413|exocyst complex component 7	AK140450|Exoc7|53413|exocyst complex component 7	BC053710|Exoc7|53413|exocyst complex component 7	BC028927|Exoc7|53413|exocyst complex component 7	AK167769|Exoc7|53413|exocyst complex component 7	AK162868|Exoc7|53413|exocyst complex component 7	AK169928|Exoc7|53413|exocyst complex component 7	AK087601|Exoc7|53413|exocyst complex component 7	NM_001162872|Exoc7|53413|exocyst complex component 7	NM_016857|Exoc7|53413|exocyst complex component 7
mm9_v1_chr1_+_138362933_138362977	0.0317609	HOX{A6,A7,B6,B7}.p2	AK087451|Kif14|381293|kinesin family member 14
mm9_v1_chr15_-_3421486_3421486	0.0315904	HOX{A6,A7,B6,B7}.p2	M31680|Ghr|14600|growth hormone receptor	M33324|Ghr|14600|growth hormone receptor	NM_001048147|Ghr|14600|growth hormone receptor
mm9_v1_chr7_-_134160864_134160869	0.031477	HOX{A6,A7,B6,B7}.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr2_+_29917543_29917687	0.0314513	HOX{A6,A7,B6,B7}.p2	BC018255|Set|56086|SET nuclear oncogene	NM_023871|Set|56086|SET nuclear oncogene	AB044937|Set|56086|SET nuclear oncogene	AK011630|Set|56086|SET nuclear oncogene	BC103791|Set|56086|SET nuclear oncogene
mm9_v1_chr7_+_133920438_133920526	0.0311336	HOX{A6,A7,B6,B7}.p2	AK003371|Ypel3|66090|yippee-like 3 (Drosophila)	NM_025347|Ypel3|66090|yippee-like 3 (Drosophila)	NM_026875|Ypel3|66090|yippee-like 3 (Drosophila)	AF523353|Ypel3|66090|yippee-like 3 (Drosophila)	AK002925|Ypel3|66090|yippee-like 3 (Drosophila)	BC009171|Ypel3|66090|yippee-like 3 (Drosophila)
mm9_v1_chr3_+_63100128_63100144	0.0310804	HOX{A6,A7,B6,B7}.p2	AK040730|Mme|17380|membrane metallo endopeptidase	AK080202|Mme|17380|membrane metallo endopeptidase	BC034092|Mme|17380|membrane metallo endopeptidase
mm9_v1_chrX_+_34666757_34666828	0.0310078	HOX{A6,A7,B6,B7}.p2	NM_025937|Nkap|67050|NFKB activating protein	BC026774|Nkap|67050|NFKB activating protein	AK011492|Nkap|67050|NFKB activating protein	AY388959|Nkap|67050|NFKB activating protein	AK038344|Nkap|67050|NFKB activating protein	AK076125|Nkap|67050|NFKB activating protein	AK012826|Nkap|67050|NFKB activating protein	AK089943|Nkap|67050|NFKB activating protein
mm9_v1_chr19_+_5038825_5038950	0.0308036	HOX{A6,A7,B6,B7}.p2	AK158899|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_175383|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK050347|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC069927|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK083857|B3gnt1|108902|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
mm9_v1_chr11_-_57982024_57982049	0.0306986	HOX{A6,A7,B6,B7}.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr11_-_6130124_6130247	0.0306349	HOX{A6,A7,B6,B7}.p2	BC131788|Npc1l1|237636|NPC1-like 1	AY437866|Npc1l1|237636|NPC1-like 1	BC131789|Npc1l1|237636|NPC1-like 1	AK078947|Npc1l1|237636|NPC1-like 1	NM_207242|Npc1l1|237636|NPC1-like 1
mm9_v1_chr3_-_129534201_129534313	0.0299515	HOX{A6,A7,B6,B7}.p2	BC021873|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	BC048685|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	NM_026578|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr16_+_33518680_33518680	0.0299428	HOX{A6,A7,B6,B7}.p2	BC030926|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001083902|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8
mm9_v1_chr7_-_134530626_134530679	0.0294531	HOX{A6,A7,B6,B7}.p2	AK020267|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	BC031466|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	AK035847|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	NM_030226|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene
mm9_v1_chr11_-_54080751_54080780	0.0294397	HOX{A6,A7,B6,B7}.p2	DQ788721|Il3|16187|interleukin 3	BC125552|Il3|16187|interleukin 3	BC125554|Il3|16187|interleukin 3	K01668|Il3|16187|interleukin 3	K01850|Il3|16187|interleukin 3	AK153634|Il3|16187|interleukin 3	NM_010556|Il3|16187|interleukin 3
mm9_v1_chrX_+_33868347_33868594	0.0294048	HOX{A6,A7,B6,B7}.p2	AK167341|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK016522|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK147751|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	NM_028894|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120688|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120690|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK030866|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3
mm9_v1_chr2_-_26150076_26150076	0.0293933	HOX{A6,A7,B6,B7}.p2	AK077032|4932418E24Rik|329366|RIKEN cDNA 4932418E24 gene	NM_177841|4932418E24Rik|329366|RIKEN cDNA 4932418E24 gene
mm9_v1_chr3_-_141832171_141832181	0.029372	HOX{A6,A7,B6,B7}.p2	AK086130|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	Z23143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr14_+_105657968_105657981	0.0289347	HOX{A6,A7,B6,B7}.p2	BC071237|Ndfip2|76273|Nedd4 family interacting protein 2	BC106125|Ndfip2|76273|Nedd4 family interacting protein 2	AK078939|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr8_+_97125835_97125965	0.0287093	HOX{A6,A7,B6,B7}.p2	NM_026274|Rspry1|67610|ring finger and SPRY domain containing 1	BC054121|Rspry1|67610|ring finger and SPRY domain containing 1	AK150941|Rspry1|67610|ring finger and SPRY domain containing 1	AK152435|Rspry1|67610|ring finger and SPRY domain containing 1	AK172461|Rspry1|67610|ring finger and SPRY domain containing 1	AK166167|Rspry1|67610|ring finger and SPRY domain containing 1	AK151018|Rspry1|67610|ring finger and SPRY domain containing 1	AK152024|Rspry1|67610|ring finger and SPRY domain containing 1	AK156697|Rspry1|67610|ring finger and SPRY domain containing 1	AK146028|Rspry1|67610|ring finger and SPRY domain containing 1	AK172567|Rspry1|67610|ring finger and SPRY domain containing 1	AK032416|Rspry1|67610|ring finger and SPRY domain containing 1	AK141443|Rspry1|67610|ring finger and SPRY domain containing 1
mm9_v1_chr11_+_83116262_83116315	0.0287017	HOX{A6,A7,B6,B7}.p2	AK004975|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit
mm9_v1_chr16_+_90831052_90831391	0.0280935	HOX{A6,A7,B6,B7}.p2	AK037486|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC132305|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC144751|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC157969|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC100350|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	NM_027627|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	AF358257|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene
mm9_v1_chr1_-_135557461_135557461	0.0280415	HOX{A6,A7,B6,B7}.p2	AK144981|Zbed6|667118|zinc finger, BED domain containing 6	NM_001166552|Zbed6|667118|zinc finger, BED domain containing 6
mm9_v1_chr4_-_133794246_133794313	0.0279981	HOX{A6,A7,B6,B7}.p2	AK145910|Cnksr1|194231|connector enhancer of kinase suppressor of Ras 1	BC113805|Cnksr1|194231|connector enhancer of kinase suppressor of Ras 1	BC113956|Cnksr1|194231|connector enhancer of kinase suppressor of Ras 1	NM_001081047|Cnksr1|194231|connector enhancer of kinase suppressor of Ras 1
mm9_v1_chr5_-_110815980_110816158	0.0279466	HOX{A6,A7,B6,B7}.p2	BC151196|Fbrsl1|381668|fibrosin-like 1	AK031967|Fbrsl1|381668|fibrosin-like 1	NM_028596|Fbrsl1|381668|fibrosin-like 1
mm9_v1_chr8_-_108224992_108225001	0.0278037	HOX{A6,A7,B6,B7}.p2	NM_001012638|Acd|497652|adrenocortical dysplasia	AK170606|Acd|497652|adrenocortical dysplasia
mm9_v1_chr2_+_58419708_58419797	0.0277936	HOX{A6,A7,B6,B7}.p2	AK087904|Upp2|76654|uridine phosphorylase 2	AK161816|Upp2|76654|uridine phosphorylase 2	AK044005|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr17_-_35299913_35299918	0.0277443	HOX{A6,A7,B6,B7}.p2	AK220526|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr2_+_121782185_121782265	0.0277185	HOX{A6,A7,B6,B7}.p2	AK033382|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	NM_212450|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK169248|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK044805|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK053513|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC066219|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK030085|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK041422|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK049463|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK160431|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC052660|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr12_-_76836549_76836721	0.0275138	HOX{A6,A7,B6,B7}.p2	AF415215|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	BC037592|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	BC026814|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AF247177|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AK154116|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AK043586|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AK149860|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	NM_030750|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1
mm9_v1_chr18_-_42110847_42110895	0.0275011	HOX{A6,A7,B6,B7}.p2	BC119251|Prelid2|77619|PRELI domain containing 2	BC120711|Prelid2|77619|PRELI domain containing 2	BC145035|Prelid2|77619|PRELI domain containing 2	NM_029942|Prelid2|77619|PRELI domain containing 2	AK021193|Prelid2|77619|PRELI domain containing 2
mm9_v1_chr9_-_21889810_21889832	0.0274809	HOX{A6,A7,B6,B7}.p2	BC016424|Ecsit|26940|ECSIT homolog (Drosophila)	AF182510|Ecsit|26940|ECSIT homolog (Drosophila)	NM_012029|Ecsit|26940|ECSIT homolog (Drosophila)
mm9_v1_chr3_+_93123668_93123671	0.0273661	HOX{A6,A7,B6,B7}.p2	AK041026|Hrnr|68723|hornerin	NM_133698|Hrnr|68723|hornerin
mm9_v1_chr2_-_27102239_27102352	0.0273462	HOX{A6,A7,B6,B7}.p2	BC003456|Sardh|192166|sarcosine dehydrogenase	NM_138665|Sardh|192166|sarcosine dehydrogenase	AK163515|Sardh|192166|sarcosine dehydrogenase
mm9_v1_chr15_-_102455844_102455918	0.0271281	HOX{A6,A7,B6,B7}.p2	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr14_+_59820064_59820146	0.0270847	HOX{A6,A7,B6,B7}.p2	NM_027764|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK089923|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK088299|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	BC067005|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK033501|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr4_+_118081908_118082012	0.0269751	HOX{A6,A7,B6,B7}.p2	AK011080|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_020000|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_173719|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK147032|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK005422|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK148025|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC051683|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK008759|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC021870|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AB041805|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm9_v1_chr8_+_109580775_109580831	0.026658	HOX{A6,A7,B6,B7}.p2	AK003739|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_001164472|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_025391|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	BC003972|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK006057|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK014290|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)
mm9_v1_chr18_+_34490797_34490849	0.0265415	HOX{A6,A7,B6,B7}.p2	AK004118|Srp19|66384|signal recognition particle 19	AK037009|Srp19|66384|signal recognition particle 19	NM_025527|Srp19|66384|signal recognition particle 19	AK010760|Srp19|66384|signal recognition particle 19	AK152322|Srp19|66384|signal recognition particle 19	AK135508|Srp19|66384|signal recognition particle 19	AK162107|Srp19|66384|signal recognition particle 19	BC051932|Srp19|66384|signal recognition particle 19	AK009412|Srp19|66384|signal recognition particle 19
mm9_v1_chr13_-_23854226_23854257	0.0264474	HOX{A6,A7,B6,B7}.p2	AK006742|Hist1h3a|360198|histone cluster 1, H3a	BC115816|Hist1h3a|360198|histone cluster 1, H3a	AK018952|Hist1h3a|360198|histone cluster 1, H3a	NM_013550|Hist1h3a|360198|histone cluster 1, H3a
mm9_v1_chr14_-_70999625_70999666	0.0262144	HOX{A6,A7,B6,B7}.p2	NM_194345|Fam160b2|239170|family with sequence similarity 160, member B2	BC050861|Fam160b2|239170|family with sequence similarity 160, member B2
mm9_v1_chr7_-_52104247_52104292	0.0261731	HOX{A6,A7,B6,B7}.p2	BC035449|Tbc1d17|233204|TBC1 domain family, member 17	AK081318|Tbc1d17|233204|TBC1 domain family, member 17	AK149917|Tbc1d17|233204|TBC1 domain family, member 17	AK153732|Tbc1d17|233204|TBC1 domain family, member 17	AK170821|Tbc1d17|233204|TBC1 domain family, member 17	AK039566|Tbc1d17|233204|TBC1 domain family, member 17	AK083153|Tbc1d17|233204|TBC1 domain family, member 17	AK136705|Tbc1d17|233204|TBC1 domain family, member 17	AK087754|Tbc1d17|233204|TBC1 domain family, member 17	AK046883|Tbc1d17|233204|TBC1 domain family, member 17
mm9_v1_chr11_-_17853850_17853896	0.0260083	HOX{A6,A7,B6,B7}.p2	BC028916|Etaa1|68145|Ewing's tumor-associated antigen 1	AK034138|Etaa1|68145|Ewing's tumor-associated antigen 1	AK019965|Etaa1|68145|Ewing's tumor-associated antigen 1	NM_026576|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr11_+_104411976_104411976	0.0257503	HOX{A6,A7,B6,B7}.p2	BC048485|Myl4|17896|myosin, light polypeptide 4	NM_010858|Myl4|17896|myosin, light polypeptide 4
mm9_v1_chr3_+_53267587_53267689	0.0256242	HOX{A6,A7,B6,B7}.p2	AK034174|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr9_-_123893240_123893240	0.025451	HOX{A6,A7,B6,B7}.p2	BC127143|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	BC128466|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	NM_007718|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1
mm9_v1_chr7_+_52676315_52676315	0.0254147	HOX{A6,A7,B6,B7}.p2	NM_008497|Lhb|16866|luteinizing hormone beta
mm9_v1_chr19_+_5474686_5474769	0.0252749	HOX{A6,A7,B6,B7}.p2	NM_021474|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AK075585|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	NM_001164352|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AF109122|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm9_v1_chr4_+_115457560_115457648	0.0251141	HOX{A6,A7,B6,B7}.p2	BC044874|Atpaf1|230649|ATP synthase mitochondrial F1 complex assembly factor 1	NM_181040|Atpaf1|230649|ATP synthase mitochondrial F1 complex assembly factor 1
mm9_v1_chr5_+_16078748_16078768	0.0243684	HOX{A6,A7,B6,B7}.p2	AK164241|Hgf|15234|hepatocyte growth factor
mm9_v1_chr2_-_30270970_30271290	0.0241918	HOX{A6,A7,B6,B7}.p2	X85983|Crat|12908|carnitine acetyltransferase	BC006668|Crat|12908|carnitine acetyltransferase	AK041431|Crat|12908|carnitine acetyltransferase	AK170740|Crat|12908|carnitine acetyltransferase	NM_007760|Crat|12908|carnitine acetyltransferase	AK132179|Crat|12908|carnitine acetyltransferase
mm9_v1_chr3_-_144233110_144233181	0.0240109	HOX{A6,A7,B6,B7}.p2	AK165112|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AK088698|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	NM_011828|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr3_+_80840337_80840337	0.023556	HOX{A6,A7,B6,B7}.p2	AF266467|Pdgfc|54635|platelet-derived growth factor, C polypeptide	NM_019971|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr11_-_54674080_54674223	0.0234212	HOX{A6,A7,B6,B7}.p2	NM_029327|Lyrm7|75530|LYR motif containing 7	BC139403|Lyrm7|75530|LYR motif containing 7	BC139406|Lyrm7|75530|LYR motif containing 7
mm9_v1_chr4_+_62186402_62186402	0.0229684	HOX{A6,A7,B6,B7}.p2	AK077205|4933430I17Rik|214106|RIKEN cDNA 4933430I17 gene	BC116650|4933430I17Rik|214106|RIKEN cDNA 4933430I17 gene	NM_177607|4933430I17Rik|214106|RIKEN cDNA 4933430I17 gene
mm9_v1_chr9_-_19976012_19976012	0.0228446	HOX{A6,A7,B6,B7}.p2	NM_146904|Olfr870|57251|olfactory receptor 870
mm9_v1_chr3_+_137581449_137581573	0.0227896	HOX{A6,A7,B6,B7}.p2	AK151432|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AK088454|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AF082526|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	NM_019920|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AK159450|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AK162102|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	BC016417|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	BC083155|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
mm9_v1_chr11_+_59120429_59120467	0.0227428	HOX{A6,A7,B6,B7}.p2	AK087490|Wnt9a|216795|wingless-type MMTV integration site 9A	NM_139298|Wnt9a|216795|wingless-type MMTV integration site 9A	BC066165|Wnt9a|216795|wingless-type MMTV integration site 9A	AB072311|Wnt9a|216795|wingless-type MMTV integration site 9A
mm9_v1_chr11_-_68666432_68666614	0.0227149	HOX{A6,A7,B6,B7}.p2	AK011168|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	AF290472|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	AK146029|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	BC046796|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr3_+_41408529_41408643	0.0225717	HOX{A6,A7,B6,B7}.p2	BC038026|Phf17|269424|PHD finger protein 17
mm9_v1_chr1_-_173987681_173987726	0.0221894	HOX{A6,A7,B6,B7}.p2	M82874|Nhlh1|18071|nescient helix loop helix 1	BC051018|Nhlh1|18071|nescient helix loop helix 1	BC054760|Nhlh1|18071|nescient helix loop helix 1	AK149315|Nhlh1|18071|nescient helix loop helix 1	NM_010916|Nhlh1|18071|nescient helix loop helix 1
mm9_v1_chr17_-_36394771_36394836	0.0221404	HOX{A6,A7,B6,B7}.p2	AK003455|Rpp21|67676|ribonuclease P 21 subunit (human)	AK002780|Rpp21|67676|ribonuclease P 21 subunit (human)	NM_026308|Rpp21|67676|ribonuclease P 21 subunit (human)	AJ504717|Rpp21|67676|ribonuclease P 21 subunit (human)	AY251016|Rpp21|67676|ribonuclease P 21 subunit (human)	AY251017|Rpp21|67676|ribonuclease P 21 subunit (human)	BC028491|Rpp21|67676|ribonuclease P 21 subunit (human)
mm9_v1_chr2_+_120229988_120230073	0.0217827	HOX{A6,A7,B6,B7}.p2	BC058197|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chr6_+_30459848_30459899	0.0213922	HOX{A6,A7,B6,B7}.p2	AK006038|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	NM_027073|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	BC049755|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr17_+_27110101_27110235	0.02139	HOX{A6,A7,B6,B7}.p2	BC049933|Zbtb9|474156|zinc finger and BTB domain containing 9	NM_001005916|Zbtb9|474156|zinc finger and BTB domain containing 9	AK154850|Zbtb9|474156|zinc finger and BTB domain containing 9	AK030262|Zbtb9|474156|zinc finger and BTB domain containing 9
mm9_v1_chrX_-_154036557_154036600	0.0211397	HOX{A6,A7,B6,B7}.p2	BC038343|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK036071|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK164486|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK047841|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr4_+_135728188_135728308	0.0211122	HOX{A6,A7,B6,B7}.p2	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr3_+_87946259_87946350	0.0210227	HOX{A6,A7,B6,B7}.p2	AK155778|Mef2d|17261|myocyte enhancer factor 2D	NM_133665|Mef2d|17261|myocyte enhancer factor 2D	AK141270|Mef2d|17261|myocyte enhancer factor 2D	BC011070|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr8_-_74967581_74967676	0.0207137	HOX{A6,A7,B6,B7}.p2	AB206786|Calr3|73316|calreticulin 3	AK006582|Calr3|73316|calreticulin 3	NM_028500|Calr3|73316|calreticulin 3
mm9_v1_chr3_-_7613335_7613426	0.0206568	HOX{A6,A7,B6,B7}.p2	BC110553|Il7|16196|interleukin 7	AK041307|Il7|16196|interleukin 7	NM_008371|Il7|16196|interleukin 7
mm9_v1_chr6_-_83071414_83071464	0.0205043	HOX{A6,A7,B6,B7}.p2	U40825|Wbp1|22377|WW domain binding protein 1	AK170907|Wbp1|22377|WW domain binding protein 1	NM_001083922|Wbp1|22377|WW domain binding protein 1	NM_001083923|Wbp1|22377|WW domain binding protein 1	NM_016757|Wbp1|22377|WW domain binding protein 1	AK152822|Wbp1|22377|WW domain binding protein 1
mm9_v1_chr1_-_9289810_9289957	0.0203706	HOX{A6,A7,B6,B7}.p2	NM_027671|Sntg1|71096|syntrophin, gamma 1	AK038698|Sntg1|71096|syntrophin, gamma 1
mm9_v1_chr5_-_115223373_115223529	0.0200968	HOX{A6,A7,B6,B7}.p2	AF148693|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK005365|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK017943|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC043062|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC056993|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077360|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_019834|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK220323|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077359|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK148029|Git2|26431|G protein-coupled receptor kinase-interactor 2
mm9_v1_chr3_-_51081286_51081359	0.020073	HOX{A6,A7,B6,B7}.p2	AF256218|Elf2|69257|E74-like factor 2	AF256219|Elf2|69257|E74-like factor 2
mm9_v1_chr13_+_74258962_74258962	0.019835	HOX{A6,A7,B6,B7}.p2	NM_001081060|Slc9a3|105243|solute carrier family 9 (sodium/hydrogen exchanger), member 3
mm9_v1_chrX_+_35542969_35543017	0.0197606	HOX{A6,A7,B6,B7}.p2	NM_001079513|Zbtb33|56805|zinc finger and BTB domain containing 33	NM_020256|Zbtb33|56805|zinc finger and BTB domain containing 33	AK087417|Zbtb33|56805|zinc finger and BTB domain containing 33	AK089423|Zbtb33|56805|zinc finger and BTB domain containing 33	AF097416|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr19_+_59017874_59017915	0.0197118	HOX{A6,A7,B6,B7}.p2	NM_178689|Eno4|226265|enolase 4	AK032395|Eno4|226265|enolase 4
mm9_v1_chr5_-_109224353_109224381	0.019541	HOX{A6,A7,B6,B7}.p2	BC132664|Tmed11|67366|transmembrane emp24 protein transport domain containing	BC132666|Tmed11|67366|transmembrane emp24 protein transport domain containing	AK019032|Tmed11|67366|transmembrane emp24 protein transport domain containing	AK007381|Tmed11|67366|transmembrane emp24 protein transport domain containing	NM_026109|Tmed11|67366|transmembrane emp24 protein transport domain containing
mm9_v1_chr5_-_144984420_144984479	0.0192676	HOX{A6,A7,B6,B7}.p2	AK032858|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK034020|Tecpr1|70381|tectonin beta-propeller repeat containing 1	BC046968|Tecpr1|70381|tectonin beta-propeller repeat containing 1	NM_027410|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK163522|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr3_-_51081421_51081435	0.0189929	HOX{A6,A7,B6,B7}.p2	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr5_+_107860567_107860567	0.0189446	HOX{A6,A7,B6,B7}.p2	AK014940|Lpcat2b|70902|lysophosphatidylcholine acyltransferase 2B	AK029548|Lpcat2b|70902|lysophosphatidylcholine acyltransferase 2B	NM_027599|Lpcat2b|70902|lysophosphatidylcholine acyltransferase 2B
mm9_v1_chr11_+_106649938_106649986	0.0188745	HOX{A6,A7,B6,B7}.p2	AK089185|Ccdc45|320162|coiled-coil domain containing 45	AK084665|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr7_-_52714483_52714532	0.0188052	HOX{A6,A7,B6,B7}.p2	AK012690|Ftl1|14325|ferritin light chain 1
mm9_v1_chr11_+_101594342_101594372	0.0186841	HOX{A6,A7,B6,B7}.p2	AK170616|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr11_+_69139759_69139835	0.0181369	HOX{A6,A7,B6,B7}.p2	AK049316|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK083134|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	NM_010599|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK046194|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK031806|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK044102|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	BC017518|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3
mm9_v1_chr7_+_25421551_25421577	0.0180031	HOX{A6,A7,B6,B7}.p2	BC094282|Lypd3|72434|Ly6/Plaur domain containing 3	AK009998|Lypd3|72434|Ly6/Plaur domain containing 3
mm9_v1_chr1_-_137210293_137210334	0.0179999	HOX{A6,A7,B6,B7}.p2	AF106620|Timm17a|21854|translocase of inner mitochondrial membrane 17a	BC010830|Timm17a|21854|translocase of inner mitochondrial membrane 17a	BC098216|Timm17a|21854|translocase of inner mitochondrial membrane 17a	AK003114|Timm17a|21854|translocase of inner mitochondrial membrane 17a	AK003129|Timm17a|21854|translocase of inner mitochondrial membrane 17a	NM_011590|Timm17a|21854|translocase of inner mitochondrial membrane 17a
mm9_v1_chr5_-_77738960_77739110	0.0179712	HOX{A6,A7,B6,B7}.p2	AK139955|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK172681|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AB041537|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK017793|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK128920|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	BC017154|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK163935|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK019975|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK011533|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK157246|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	NM_019836|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene
mm9_v1_chr1_+_135206360_135206408	0.0178908	HOX{A6,A7,B6,B7}.p2	AY707855|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	BC024448|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK002581|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK141378|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	NM_026680|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)
mm9_v1_chr7_-_27944870_27944933	0.0178617	HOX{A6,A7,B6,B7}.p2	AK179611|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr8_+_125748717_125748786	0.0177804	HOX{A6,A7,B6,B7}.p2	NM_194444|Cdk10|234854|cyclin-dependent kinase 10	NM_194446|Cdk10|234854|cyclin-dependent kinase 10	DQ288857|Cdk10|234854|cyclin-dependent kinase 10	BC017131|Cdk10|234854|cyclin-dependent kinase 10	AK144801|Cdk10|234854|cyclin-dependent kinase 10	AK170594|Cdk10|234854|cyclin-dependent kinase 10	BC052096|Cdk10|234854|cyclin-dependent kinase 10	BC023736|Cdk10|234854|cyclin-dependent kinase 10	AK133918|Cdk10|234854|cyclin-dependent kinase 10
mm9_v1_chr2_+_74714444_74714447	0.0176673	HOX{A6,A7,B6,B7}.p2	AK212919|Mtx2|53375|metaxin 2
mm9_v1_chr9_+_25060152_25060278	0.0174526	HOX{A6,A7,B6,B7}.p2	NM_009859|Sept7|235072|septin 7	BC058587|Sept7|235072|septin 7	AK141572|Sept7|235072|septin 7	AK147986|Sept7|235072|septin 7	AK088997|Sept7|235072|septin 7	AK144127|Sept7|235072|septin 7	AK220447|Sept7|235072|septin 7
mm9_v1_chr5_-_137971968_137971994	0.01726	HOX{A6,A7,B6,B7}.p2	U34960|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	BC029077|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2
mm9_v1_chr7_+_105987354_105987515	0.0172199	HOX{A6,A7,B6,B7}.p2	NM_009519|Wnt11|22411|wingless-related MMTV integration site 11	X70800|Wnt11|22411|wingless-related MMTV integration site 11	BC125482|Wnt11|22411|wingless-related MMTV integration site 11	BC125484|Wnt11|22411|wingless-related MMTV integration site 11	BC144947|Wnt11|22411|wingless-related MMTV integration site 11	AK031573|Wnt11|22411|wingless-related MMTV integration site 11
mm9_v1_chr8_-_67171805_67171871	0.0171853	HOX{A6,A7,B6,B7}.p2	AK047891|Cpe|12876|carboxypeptidase E	BC010197|Cpe|12876|carboxypeptidase E	NM_013494|Cpe|12876|carboxypeptidase E	AK160097|Cpe|12876|carboxypeptidase E
mm9_v1_chr2_+_5766274_5766351	0.0170534	HOX{A6,A7,B6,B7}.p2	BC049595|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5	AK018345|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5	BC004571|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm9_v1_chr11_+_76057230_76057299	0.0170121	HOX{A6,A7,B6,B7}.p2	AK132643|Rnmtl1|67390|RNA methyltransferase like 1	NM_183263|Rnmtl1|67390|RNA methyltransferase like 1	AK041163|Rnmtl1|67390|RNA methyltransferase like 1	AK147805|Rnmtl1|67390|RNA methyltransferase like 1	BC090975|Rnmtl1|67390|RNA methyltransferase like 1	AK012200|Rnmtl1|67390|RNA methyltransferase like 1	AK014739|Rnmtl1|67390|RNA methyltransferase like 1	BC038288|Rnmtl1|67390|RNA methyltransferase like 1
mm9_v1_chr8_-_113370626_113370708	0.0169012	HOX{A6,A7,B6,B7}.p2	BC042580|Sf3b3|101943|splicing factor 3b, subunit 3	AK209554|Sf3b3|101943|splicing factor 3b, subunit 3	BC011412|Sf3b3|101943|splicing factor 3b, subunit 3	AK017529|Sf3b3|101943|splicing factor 3b, subunit 3	AK040625|Sf3b3|101943|splicing factor 3b, subunit 3	AK088268|Sf3b3|101943|splicing factor 3b, subunit 3	AK046845|Sf3b3|101943|splicing factor 3b, subunit 3	AK128988|Sf3b3|101943|splicing factor 3b, subunit 3	AK147914|Sf3b3|101943|splicing factor 3b, subunit 3	AK164199|Sf3b3|101943|splicing factor 3b, subunit 3	NM_133953|Sf3b3|101943|splicing factor 3b, subunit 3
mm9_v1_chr4_+_48553291_48553370	0.0167282	HOX{A6,A7,B6,B7}.p2	BC052696|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK013199|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_028137|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr14_-_65059694_65059876	0.0166978	HOX{A6,A7,B6,B7}.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr2_+_31615444_31615539	0.0165748	HOX{A6,A7,B6,B7}.p2	K03228|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	NM_009594|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK090095|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	J02995|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK194745|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase
mm9_v1_chrX_+_149993135_149993155	0.0162098	HOX{A6,A7,B6,B7}.p2	AK005674|Cypt3|69361|cysteine-rich perinuclear theca 3	BC048527|Cypt3|69361|cysteine-rich perinuclear theca 3	NM_173367|Cypt3|69361|cysteine-rich perinuclear theca 3	AM040452|Cypt3|69361|cysteine-rich perinuclear theca 3	AF463500|Cypt3|69361|cysteine-rich perinuclear theca 3
mm9_v1_chr1_-_91911151_91911240	0.0161564	HOX{A6,A7,B6,B7}.p2	AY057054|Asb18|208372|ankyrin repeat and SOCS box-containing 18	BC107370|Asb18|208372|ankyrin repeat and SOCS box-containing 18	BC107371|Asb18|208372|ankyrin repeat and SOCS box-containing 18	BC127152|Asb18|208372|ankyrin repeat and SOCS box-containing 18	NM_139152|Asb18|208372|ankyrin repeat and SOCS box-containing 18	BC141295|Asb18|208372|ankyrin repeat and SOCS box-containing 18	BC145621|Asb18|208372|ankyrin repeat and SOCS box-containing 18
mm9_v1_chr6_+_113408650_113408888	0.0159093	HOX{A6,A7,B6,B7}.p2	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr14_-_103746016_103746030	0.0158196	HOX{A6,A7,B6,B7}.p2	AK149225|Mycbp2|105689|MYC binding protein 2	NM_207215|Mycbp2|105689|MYC binding protein 2	AK048441|Mycbp2|105689|MYC binding protein 2	AK081652|Mycbp2|105689|MYC binding protein 2
mm9_v1_chr1_+_53370483_53370609	0.0157942	HOX{A6,A7,B6,B7}.p2	BC030671|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	BC058172|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK045669|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	NM_028091|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK137332|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK011265|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK137402|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1
mm9_v1_chr9_-_119002601_119002619	0.0150786	HOX{A6,A7,B6,B7}.p2	AF133125|Plcd1|18799|phospholipase C, delta 1	AK082890|Plcd1|18799|phospholipase C, delta 1	NM_019676|Plcd1|18799|phospholipase C, delta 1	U85711|Plcd1|18799|phospholipase C, delta 1	AK028749|Plcd1|18799|phospholipase C, delta 1
mm9_v1_chrX_-_98254969_98254977	0.0148373	HOX{A6,A7,B6,B7}.p2	AK082794|Tex11|83558|testis expressed gene 11	BC116709|Tex11|83558|testis expressed gene 11	AF285572|Tex11|83558|testis expressed gene 11	AK029799|Tex11|83558|testis expressed gene 11	NM_001167997|Tex11|83558|testis expressed gene 11	NM_031384|Tex11|83558|testis expressed gene 11
mm9_v1_chr12_-_84938063_84938077	0.0147279	HOX{A6,A7,B6,B7}.p2	AK090334|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr11_+_101594269_101594313	0.0145842	HOX{A6,A7,B6,B7}.p2	AK153829|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_144831|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC132445|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK220485|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chrX_+_97800835_97800900	0.0144205	HOX{A6,A7,B6,B7}.p2	NM_133205|Arr3|170735|arrestin 3, retinal	AF156979|Arr3|170735|arrestin 3, retinal	BC017145|Arr3|170735|arrestin 3, retinal
mm9_v1_chr2_+_121986435_121986443	0.0143901	HOX{A6,A7,B6,B7}.p2	AF334958|Trim69|70928|tripartite motif-containing 69	NM_080510|Trim69|70928|tripartite motif-containing 69	AK014923|Trim69|70928|tripartite motif-containing 69	BC050815|Trim69|70928|tripartite motif-containing 69
mm9_v1_chr11_-_69182891_69182931	0.0142598	HOX{A6,A7,B6,B7}.p2	AK045449|Chd3|216848|chromodomain helicase DNA binding protein 3	NM_146019|Chd3|216848|chromodomain helicase DNA binding protein 3
mm9_v1_chr9_+_57369044_57369118	0.0140616	HOX{A6,A7,B6,B7}.p2	BC003831|Cox5a|12858|cytochrome c oxidase, subunit Va	BC034302|Cox5a|12858|cytochrome c oxidase, subunit Va	AK018723|Cox5a|12858|cytochrome c oxidase, subunit Va	X15963|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr12_+_86337250_86337338	0.0138052	HOX{A6,A7,B6,B7}.p2	AK044440|Ylpm1|56531|YLP motif containing 1	NM_178363|Ylpm1|56531|YLP motif containing 1	BC031541|Ylpm1|56531|YLP motif containing 1	AK087500|Ylpm1|56531|YLP motif containing 1	AB033168|Ylpm1|56531|YLP motif containing 1
mm9_v1_chr9_-_86465373_86465470	0.0137468	HOX{A6,A7,B6,B7}.p2	BC138700|Pgm3|109785|phosphoglucomutase 3	AK051706|Pgm3|109785|phosphoglucomutase 3	AK032776|Pgm3|109785|phosphoglucomutase 3	AK049337|Pgm3|109785|phosphoglucomutase 3	AK169141|Pgm3|109785|phosphoglucomutase 3	AK169082|Pgm3|109785|phosphoglucomutase 3	AK169787|Pgm3|109785|phosphoglucomutase 3	AK165513|Pgm3|109785|phosphoglucomutase 3	AK013402|Pgm3|109785|phosphoglucomutase 3	AK036561|Pgm3|109785|phosphoglucomutase 3	AK049758|Pgm3|109785|phosphoglucomutase 3	AK028066|Pgm3|109785|phosphoglucomutase 3	AK160913|Pgm3|109785|phosphoglucomutase 3	AK043547|Pgm3|109785|phosphoglucomutase 3	NM_001163746|Pgm3|109785|phosphoglucomutase 3	NM_028352|Pgm3|109785|phosphoglucomutase 3
mm9_v1_chr6_-_17980373_17980444	0.0133523	HOX{A6,A7,B6,B7}.p2	NM_023653|Wnt2|22413|wingless-related MMTV integration site 2
mm9_v1_chr9_+_7692089_7692096	0.0132073	HOX{A6,A7,B6,B7}.p2	L36244|Mmp7|17393|matrix metallopeptidase 7	AK144515|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr3_-_91927868_91927868	0.0130127	HOX{A6,A7,B6,B7}.p2	AK079463|Prr9|109314|proline rich 9	NM_175424|Prr9|109314|proline rich 9
mm9_v1_chr19_+_60887452_60887529	0.01295	HOX{A6,A7,B6,B7}.p2	NM_001167829|Fam45a|67894|family with sequence similarity 45, member A	NM_026437|Fam45a|67894|family with sequence similarity 45, member A	AK004643|Fam45a|67894|family with sequence similarity 45, member A	AK168474|Fam45a|67894|family with sequence similarity 45, member A	AK171767|Fam45a|67894|family with sequence similarity 45, member A	AK145769|Fam45a|67894|family with sequence similarity 45, member A	AK007867|Fam45a|67894|family with sequence similarity 45, member A	BC013514|Fam45a|67894|family with sequence similarity 45, member A	AK202624|Fam45a|67894|family with sequence similarity 45, member A
mm9_v1_chr10_+_84085091_84085181	0.0129145	HOX{A6,A7,B6,B7}.p2	AK039366|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	AK039244|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	BC068143|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	NM_027423|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B
mm9_v1_chr11_+_82577835_82577869	0.0129024	HOX{A6,A7,B6,B7}.p2	AK008475|Zfp830|66983|zinc finger protein 830	AK132497|Zfp830|66983|zinc finger protein 830	NM_025884|Zfp830|66983|zinc finger protein 830	AK148058|Zfp830|66983|zinc finger protein 830	AK050043|Zfp830|66983|zinc finger protein 830	AK010353|Zfp830|66983|zinc finger protein 830	AK167656|Zfp830|66983|zinc finger protein 830	BC024340|Zfp830|66983|zinc finger protein 830	AK168417|Zfp830|66983|zinc finger protein 830	AK017640|Zfp830|66983|zinc finger protein 830
mm9_v1_chr4_+_43591798_43591856	0.0123798	HOX{A6,A7,B6,B7}.p2	BC086614|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)	AK170117|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)	AK129103|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)	AK089288|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)
mm9_v1_chr6_-_6832067_6832086	0.0123138	HOX{A6,A7,B6,B7}.p2	AF072452|Dlx5|13395|distal-less homeobox 5	AF072453|Dlx5|13395|distal-less homeobox 5	NM_010056|Dlx5|13395|distal-less homeobox 5	NM_198854|Dlx5|13395|distal-less homeobox 5	AK158121|Dlx5|13395|distal-less homeobox 5	U67840|Dlx5|13395|distal-less homeobox 5
mm9_v1_chr12_+_60167873_60167985	0.0122569	HOX{A6,A7,B6,B7}.p2	NM_008891|Pnn|18949|pinin	AK051640|Pnn|18949|pinin	AK009055|Pnn|18949|pinin	AK085295|Pnn|18949|pinin	AK050669|Pnn|18949|pinin	AK157587|Pnn|18949|pinin	AK028219|Pnn|18949|pinin	AK161109|Pnn|18949|pinin	AK160616|Pnn|18949|pinin	BC132571|Pnn|18949|pinin	BC138014|Pnn|18949|pinin	Y08701|Pnn|18949|pinin	AK030978|Pnn|18949|pinin
mm9_v1_chr2_+_120229945_120229959	0.0120231	HOX{A6,A7,B6,B7}.p2	BC075687|Ganc|76051|glucosidase, alpha; neutral C	AK135218|Ganc|76051|glucosidase, alpha; neutral C	AK220303|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chr8_-_87604530_87604644	0.0118753	HOX{A6,A7,B6,B7}.p2	BC034842|Wdr83|67836|WD repeat domain containing 83	BC019369|Wdr83|67836|WD repeat domain containing 83	BC094624|Wdr83|67836|WD repeat domain containing 83	AK005790|Wdr83|67836|WD repeat domain containing 83	BC005587|Wdr83|67836|WD repeat domain containing 83	AK020654|Wdr83|67836|WD repeat domain containing 83	AY365434|Wdr83|67836|WD repeat domain containing 83	NM_026399|Wdr83|67836|WD repeat domain containing 83
mm9_v1_chr7_+_13063644_13063667	0.0118718	HOX{A6,A7,B6,B7}.p2	AK032301|Zfp606|67370|zinc finger protein 606	AK139269|Zfp606|67370|zinc finger protein 606	NM_001039951|Zfp606|67370|zinc finger protein 606	NM_026112|Zfp606|67370|zinc finger protein 606	AK010575|Zfp606|67370|zinc finger protein 606
mm9_v1_chr16_+_87354429_87354497	0.0117293	HOX{A6,A7,B6,B7}.p2	AY456393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_001159331|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_026366|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116394|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK160298|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK145617|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC098330|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK012019|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AY536887|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm9_v1_chr8_+_87213209_87213224	0.0116159	HOX{A6,A7,B6,B7}.p2	AK032945|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr14_+_63761507_63761880	0.0116014	HOX{A6,A7,B6,B7}.p2	AK201025|Ctsb|13030|cathepsin B	AK201162|Ctsb|13030|cathepsin B	AF062526|Ctsb|13030|cathepsin B
mm9_v1_chr11_+_102977638_102977680	0.0115773	HOX{A6,A7,B6,B7}.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr13_-_53024983_53025057	0.0112842	HOX{A6,A7,B6,B7}.p2	BC026525|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK134886|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK019978|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003219|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003929|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK169661|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	BC049597|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	NM_016709|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK147855|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase
mm9_v1_chrY_+_234230_234474	0.0110575	HOX{A6,A7,B6,B7}.p2	AK047790|Kdm5d|20592|lysine (K)-specific demethylase 5D	NM_011419|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK141096|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK140971|Kdm5d|20592|lysine (K)-specific demethylase 5D	BC060077|Kdm5d|20592|lysine (K)-specific demethylase 5D	AF127244|Kdm5d|20592|lysine (K)-specific demethylase 5D	AB221607|Kdm5d|20592|lysine (K)-specific demethylase 5D	Z29652|Kdm5d|20592|lysine (K)-specific demethylase 5D
mm9_v1_chr7_+_3596861_3596991	0.0108158	HOX{A6,A7,B6,B7}.p2	AK172439|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	NM_146176|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK141718|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK044755|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	AK031774|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC030332|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr19_-_34821529_34821600	0.0103682	HOX{A6,A7,B6,B7}.p2	AK028284|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	AK029076|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	NM_172838|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm9_v1_chr9_+_22280158_22280205	0.00996946	HOX{A6,A7,B6,B7}.p2	BC046426|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	NM_178415|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	NM_181316|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK166297|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK086114|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK144730|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK028200|Bbs9|319845|Bardet-Biedl syndrome 9 (human)
mm9_v1_chr14_-_76510534_76510637	0.00920161	HOX{A6,A7,B6,B7}.p2	AK173238|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	BC029731|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK004707|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK082912|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	NM_026177|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK016681|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene
mm9_v1_chr10_+_127740390_127740482	0.00879964	HOX{A6,A7,B6,B7}.p2	AK089001|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	NM_133992|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC075686|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK004773|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK048418|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK153343|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC079841|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK161547|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK047887|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK157800|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC020158|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC008521|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK034635|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr18_+_36720238_36720319	0.00831058	HOX{A6,A7,B6,B7}.p2	NM_175375|Ankhd1|108857|ankyrin repeat and KH domain containing 1	AK080941|Ankhd1|108857|ankyrin repeat and KH domain containing 1
mm9_v1_chr14_-_61979128_61979283	0.00802879	HOX{A6,A7,B6,B7}.p2	AK019140|Ebpl|68177|emopamil binding protein-like	AK044618|Ebpl|68177|emopamil binding protein-like	AF243434|Ebpl|68177|emopamil binding protein-like	AK011237|Ebpl|68177|emopamil binding protein-like	AK163371|Ebpl|68177|emopamil binding protein-like	AK032534|Ebpl|68177|emopamil binding protein-like	BC027422|Ebpl|68177|emopamil binding protein-like	AK019963|Ebpl|68177|emopamil binding protein-like	NM_026598|Ebpl|68177|emopamil binding protein-like
mm9_v1_chr9_-_95758738_95758738	0.00802664	HOX{A6,A7,B6,B7}.p2	BC053441|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	NM_028533|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene
mm9_v1_chr5_+_121654495_121654559	0.00795332	HOX{A6,A7,B6,B7}.p2	AK153208|Rpl6|19988|ribosomal protein L6	NM_011290|Rpl6|19988|ribosomal protein L6	AK150540|Rpl6|19988|ribosomal protein L6	AK151344|Rpl6|19988|ribosomal protein L6	AK151759|Rpl6|19988|ribosomal protein L6	AK151022|Rpl6|19988|ribosomal protein L6	AK153507|Rpl6|19988|ribosomal protein L6	AK167439|Rpl6|19988|ribosomal protein L6	AK135175|Rpl6|19988|ribosomal protein L6	AK148479|Rpl6|19988|ribosomal protein L6	AK002248|Rpl6|19988|ribosomal protein L6	AK002648|Rpl6|19988|ribosomal protein L6
mm9_v1_chrX_-_106029678_106029693	0.00794873	HOX{A6,A7,B6,B7}.p2	AK050539|Brwd3|382236|bromodomain and WD repeat domain containing 3	AK163354|Brwd3|382236|bromodomain and WD repeat domain containing 3	NM_001081477|Brwd3|382236|bromodomain and WD repeat domain containing 3
mm9_v1_chr19_+_7568529_7568529	0.00790663	HOX{A6,A7,B6,B7}.p2	NM_001163505|Atl3|109168|atlastin GTPase 3
mm9_v1_chr9_+_25289110_25289167	0.00786888	HOX{A6,A7,B6,B7}.p2	AK173239|Eepd1|67484|endonuclease/exonuclease/phosphatase family domain containing 1	BC025571|Eepd1|67484|endonuclease/exonuclease/phosphatase family domain containing 1
mm9_v1_chrX_+_6645338_6645368	0.00775568	HOX{A6,A7,B6,B7}.p2	NM_001042542|Akap4|11643|A kinase (PRKA) anchor protein 4	U07423|Akap4|11643|A kinase (PRKA) anchor protein 4
mm9_v1_chr5_+_120566489_120566582	0.00769153	HOX{A6,A7,B6,B7}.p2	AK146493|Rbm19|74111|RNA binding motif protein 19	AK053511|Rbm19|74111|RNA binding motif protein 19	BC025619|Rbm19|74111|RNA binding motif protein 19	NM_028762|Rbm19|74111|RNA binding motif protein 19	AK167100|Rbm19|74111|RNA binding motif protein 19	BC034010|Rbm19|74111|RNA binding motif protein 19
mm9_v1_chr11_+_83286635_83286647	0.0075127	HOX{A6,A7,B6,B7}.p2	BC137591|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK146331|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr7_-_53965879_53966065	0.00738406	HOX{A6,A7,B6,B7}.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr15_-_101381089_101381097	0.00731842	HOX{A6,A7,B6,B7}.p2	BC108971|Krt82|114566|keratin 82	NM_053249|Krt82|114566|keratin 82	AY028606|Krt82|114566|keratin 82
mm9_v1_chr14_+_105658009_105658029	0.00721278	HOX{A6,A7,B6,B7}.p2	AK049678|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr10_+_127759512_127759609	0.00709105	HOX{A6,A7,B6,B7}.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr1_+_157882793_157883024	0.00686645	HOX{A6,A7,B6,B7}.p2	NM_172843|Tor1aip2|240832|torsin A interacting protein 2	AK150117|Tor1aip2|240832|torsin A interacting protein 2	NM_001160180|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr15_+_34425046_34425096	0.00674588	HOX{A6,A7,B6,B7}.p2	NM_026340|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	NM_152894|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	AK016547|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	BC034742|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	AK018297|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
mm9_v1_chr10_-_59465725_59465794	0.00671125	HOX{A6,A7,B6,B7}.p2	AK012280|Anapc16|52717|anaphase promoting complex subunit 16
mm9_v1_chr6_+_83958578_83958628	0.00663733	HOX{A6,A7,B6,B7}.p2	NM_001077694|Dysf|26903|dysferlin	EF041824|Dysf|26903|dysferlin
mm9_v1_chr9_+_20970150_20970317	0.00648721	HOX{A6,A7,B6,B7}.p2	AK153657|Pde4a|18577|phosphodiesterase 4A, cAMP specific	NM_183408|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139405|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139408|Pde4a|18577|phosphodiesterase 4A, cAMP specific
mm9_v1_chr15_-_76554119_76554177	0.00643902	HOX{A6,A7,B6,B7}.p2	AK186599|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene
mm9_v1_chr7_+_52151432_52151509	0.00627925	HOX{A6,A7,B6,B7}.p2	NM_027376|Fuz|70300|fuzzy homolog (Drosophila)	AK134650|Fuz|70300|fuzzy homolog (Drosophila)	AK168939|Fuz|70300|fuzzy homolog (Drosophila)	AK045745|Fuz|70300|fuzzy homolog (Drosophila)	AK033247|Fuz|70300|fuzzy homolog (Drosophila)	BC045601|Fuz|70300|fuzzy homolog (Drosophila)	AK011195|Fuz|70300|fuzzy homolog (Drosophila)
mm9_v1_chr6_+_34730847_34730979	0.00619862	HOX{A6,A7,B6,B7}.p2	AK029798|Agbl3|76223|ATP/GTP binding protein-like 3	AK030378|Agbl3|76223|ATP/GTP binding protein-like 3	AK047649|Agbl3|76223|ATP/GTP binding protein-like 3	BC087897|Agbl3|76223|ATP/GTP binding protein-like 3	BC028521|Agbl3|76223|ATP/GTP binding protein-like 3	BC139065|Agbl3|76223|ATP/GTP binding protein-like 3
mm9_v1_chr8_+_109394141_109394246	0.00588225	HOX{A6,A7,B6,B7}.p2	NM_008217|Has3|15118|hyaluronan synthase 3	U86408|Has3|15118|hyaluronan synthase 3	BC138152|Has3|15118|hyaluronan synthase 3	BC138161|Has3|15118|hyaluronan synthase 3
mm9_v1_chr9_-_72833159_72833188	0.00579609	HOX{A6,A7,B6,B7}.p2	BC099568|Gm5918|546143|predicted gene 5918	BC048630|Gm5918|546143|predicted gene 5918	NM_001198789|Gm5918|546143|predicted gene 5918	AK145722|Gm5918|546143|predicted gene 5918
mm9_v1_chr9_+_44581115_44581158	0.0055526	HOX{A6,A7,B6,B7}.p2	BC080764|Ift46|76568|intraflagellar transport 46 homolog (Chlamydomonas)
mm9_v1_chr16_+_36694063_36694080	0.0052833	HOX{A6,A7,B6,B7}.p2	AK136284|Ildr1|106347|immunoglobulin-like domain containing receptor 1	BC057644|Ildr1|106347|immunoglobulin-like domain containing receptor 1
mm9_v1_chr6_-_40949477_40949477	0.00526061	HOX{A6,A7,B6,B7}.p2	NM_001102660|Gm2663|100040208|predicted gene 2663
mm9_v1_chr3_-_97672119_97672138	0.00493222	HOX{A6,A7,B6,B7}.p2	AK083867|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	AK051209|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr18_-_40378992_40378996	0.00477153	HOX{A6,A7,B6,B7}.p2	BC055301|Yipf5|67180|Yip1 domain family, member 5
mm9_v1_chr11_-_103558971_103559046	0.00476618	HOX{A6,A7,B6,B7}.p2	AF007550|Gosr2|56494|golgi SNAP receptor complex member 2	BC051253|Gosr2|56494|golgi SNAP receptor complex member 2	AK005697|Gosr2|56494|golgi SNAP receptor complex member 2	AK002556|Gosr2|56494|golgi SNAP receptor complex member 2	BC008525|Gosr2|56494|golgi SNAP receptor complex member 2	AK013052|Gosr2|56494|golgi SNAP receptor complex member 2	AK150004|Gosr2|56494|golgi SNAP receptor complex member 2	NM_019650|Gosr2|56494|golgi SNAP receptor complex member 2
mm9_v1_chrY_-_1976583_1976583	0.00471899	HOX{A6,A7,B6,B7}.p2	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr1_+_182837982_182838044	0.00439863	HOX{A6,A7,B6,B7}.p2	AK187139|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr4_-_147818818_147818893	0.00411312	HOX{A6,A7,B6,B7}.p2	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr8_-_119098475_119098517	0.00407399	HOX{A6,A7,B6,B7}.p2	
mm9_v1_chrX_+_58962671_58962790	0.00392758	HOX{A6,A7,B6,B7}.p2	AK137057|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	BC052689|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	NM_001018087|Ldoc1|434784|leucine zipper, down-regulated in cancer 1
mm9_v1_chr5_+_36807807_36807839	0.00391196	HOX{A6,A7,B6,B7}.p2	AK161688|Grpel1|17713|GrpE-like 1, mitochondrial	AK048732|Grpel1|17713|GrpE-like 1, mitochondrial	NM_024478|Grpel1|17713|GrpE-like 1, mitochondrial	AK089113|Grpel1|17713|GrpE-like 1, mitochondrial	AK050445|Grpel1|17713|GrpE-like 1, mitochondrial
mm9_v1_chr6_+_71493841_71493983	0.00373021	HOX{A6,A7,B6,B7}.p2	AK083562|Vps24|66700|vacuolar protein sorting 24 (yeast)	NM_025783|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK018611|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK014818|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK016677|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC049964|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK009414|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC027441|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC039759|Vps24|66700|vacuolar protein sorting 24 (yeast)
mm9_v1_chr11_+_4086804_4086893	0.00364426	HOX{A6,A7,B6,B7}.p2	AK140872|Tbc1d10a|103724|TBC1 domain family, member 10a	AK220243|Tbc1d10a|103724|TBC1 domain family, member 10a	BC018300|Tbc1d10a|103724|TBC1 domain family, member 10a	NM_134023|Tbc1d10a|103724|TBC1 domain family, member 10a	AK153677|Tbc1d10a|103724|TBC1 domain family, member 10a	BC037230|Tbc1d10a|103724|TBC1 domain family, member 10a
mm9_v1_chr9_-_50369372_50369429	0.00345042	HOX{A6,A7,B6,B7}.p2	BC048458|Tex12|66654|testis expressed gene 12	NM_025687|Tex12|66654|testis expressed gene 12	AK006285|Tex12|66654|testis expressed gene 12	AF285582|Tex12|66654|testis expressed gene 12	AK017776|Tex12|66654|testis expressed gene 12	BC061081|Tex12|66654|testis expressed gene 12	AK014896|Tex12|66654|testis expressed gene 12
mm9_v1_chr6_+_64992861_64992872	0.00320992	HOX{A6,A7,B6,B7}.p2	AK147884|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr6_-_100621086_100621167	0.00311509	HOX{A6,A7,B6,B7}.p2	BC052657|Shq1|72171|SHQ1 homolog (S. cerevisiae)	AK012978|Shq1|72171|SHQ1 homolog (S. cerevisiae)	NM_181590|Shq1|72171|SHQ1 homolog (S. cerevisiae)
mm9_v1_chr12_-_53129049_53129152	0.00306362	HOX{A6,A7,B6,B7}.p2	AF045766|Gpr33|14762|G protein-coupled receptor 33	BC064084|Gpr33|14762|G protein-coupled receptor 33	NM_008159|Gpr33|14762|G protein-coupled receptor 33	GQ981323|Gpr33|14762|G protein-coupled receptor 33	GQ981327|Gpr33|14762|G protein-coupled receptor 33
mm9_v1_chr2_+_32143769_32143812	0.00290812	HOX{A6,A7,B6,B7}.p2	AK077516|Golga2|99412|golgi autoantigen, golgin subfamily a, 2	NM_001080968|Golga2|99412|golgi autoantigen, golgin subfamily a, 2	NM_133852|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr15_+_75824198_75824279	0.00288149	HOX{A6,A7,B6,B7}.p2	BC048082|Mapk15|332110|mitogen-activated protein kinase 15	NM_177922|Mapk15|332110|mitogen-activated protein kinase 15
mm9_v1_chr4_+_108507258_108507370	0.00278519	HOX{A6,A7,B6,B7}.p2	BC006857|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_025334|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)	AK002862|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)	AK003481|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)	AY548113|Txndc12|66073|thioredoxin domain containing 12 (endoplasmic reticulum)
mm9_v1_chr9_-_7387992_7388025	0.00261543	HOX{A6,A7,B6,B7}.p2	AJ278461|Mmp1b|83996|matrix metallopeptidase 1b (interstitial collagenase)	NM_032007|Mmp1b|83996|matrix metallopeptidase 1b (interstitial collagenase)
mm9_v1_chrX_+_34335651_34335798	0.00248203	HOX{A6,A7,B6,B7}.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr7_-_86887849_86887946	0.00224585	HOX{A6,A7,B6,B7}.p2	BC023439|Pex11a|18631|peroxisomal biogenesis factor 11 alpha	AK149387|Pex11a|18631|peroxisomal biogenesis factor 11 alpha	AF093669|Pex11a|18631|peroxisomal biogenesis factor 11 alpha	NM_011068|Pex11a|18631|peroxisomal biogenesis factor 11 alpha
mm9_v1_chr11_-_22760335_22760479	0.00212075	HOX{A6,A7,B6,B7}.p2	BC009075|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	NM_001169114|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
mm9_v1_chr9_-_58160966_58161035	0.00211758	HOX{A6,A7,B6,B7}.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr11_-_48630854_48630892	0.00190566	HOX{A6,A7,B6,B7}.p2	BC041780|Trim41|211007|tripartite motif-containing 41	BC031905|Trim41|211007|tripartite motif-containing 41	NM_145377|Trim41|211007|tripartite motif-containing 41
mm9_v1_chr17_-_32458048_32458134	0.00174896	HOX{A6,A7,B6,B7}.p2	BC078448|Akap8|56399|A kinase (PRKA) anchor protein 8	BC060170|Akap8|56399|A kinase (PRKA) anchor protein 8	BC042602|Akap8|56399|A kinase (PRKA) anchor protein 8	BC125521|Akap8|56399|A kinase (PRKA) anchor protein 8	BC137746|Akap8|56399|A kinase (PRKA) anchor protein 8	AK143300|Akap8|56399|A kinase (PRKA) anchor protein 8	AB028920|Akap8|56399|A kinase (PRKA) anchor protein 8	AK004801|Akap8|56399|A kinase (PRKA) anchor protein 8	BC054433|Akap8|56399|A kinase (PRKA) anchor protein 8	AK089092|Akap8|56399|A kinase (PRKA) anchor protein 8	NM_019774|Akap8|56399|A kinase (PRKA) anchor protein 8
mm9_v1_chr17_-_32458143_32458182	0.00174831	HOX{A6,A7,B6,B7}.p2	BC060209|Akap8|56399|A kinase (PRKA) anchor protein 8
mm9_v1_chr11_+_97888023_97888023	0.00129066	HOX{A6,A7,B6,B7}.p2	NM_001159483|Rpl19|19921|ribosomal protein L19
mm9_v1_chr2_+_57090045_57090088	0.00128714	HOX{A6,A7,B6,B7}.p2	AK144716|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	NM_001145820|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial
mm9_v1_chr10_-_127986030_127986175	0.0012809	HOX{A6,A7,B6,B7}.p2	U93862|Rpl41|67945|ribosomal protein L41	BC099380|Rpl41|67945|ribosomal protein L41	BC081450|Rpl41|67945|ribosomal protein L41	BC083066|Rpl41|67945|ribosomal protein L41	BC092010|Rpl41|67945|ribosomal protein L41	AK019178|Rpl41|67945|ribosomal protein L41	AK010564|Rpl41|67945|ribosomal protein L41	AK002503|Rpl41|67945|ribosomal protein L41	AK008901|Rpl41|67945|ribosomal protein L41	AK010585|Rpl41|67945|ribosomal protein L41	AK012252|Rpl41|67945|ribosomal protein L41	AK012487|Rpl41|67945|ribosomal protein L41	AK028126|Rpl41|67945|ribosomal protein L41	AK028263|Rpl41|67945|ribosomal protein L41	AK168485|Rpl41|67945|ribosomal protein L41	AK168653|Rpl41|67945|ribosomal protein L41	AK168719|Rpl41|67945|ribosomal protein L41	BC089572|Rpl41|67945|ribosomal protein L41	AK012476|Rpl41|67945|ribosomal protein L41	AK151566|Rpl41|67945|ribosomal protein L41	AK007874|Rpl41|67945|ribosomal protein L41	AK009548|Rpl41|67945|ribosomal protein L41	AK010246|Rpl41|67945|ribosomal protein L41	AK010317|Rpl41|67945|ribosomal protein L41	AK010482|Rpl41|67945|ribosomal protein L41	AK010509|Rpl41|67945|ribosomal protein L41	AK010583|Rpl41|67945|ribosomal protein L41	AK013324|Rpl41|67945|ribosomal protein L41	AK019049|Rpl41|67945|ribosomal protein L41	AK150502|Rpl41|67945|ribosomal protein L41	AK160588|Rpl41|67945|ribosomal protein L41	AK168107|Rpl41|67945|ribosomal protein L41	BC089573|Rpl41|67945|ribosomal protein L41	BC100592|Rpl41|67945|ribosomal protein L41	BC145727|Rpl41|67945|ribosomal protein L41	BC145729|Rpl41|67945|ribosomal protein L41	AK012450|Rpl41|67945|ribosomal protein L41	AK028231|Rpl41|67945|ribosomal protein L41
mm9_v1_chr1_+_162125349_162125420	0.00123911	HOX{A6,A7,B6,B7}.p2	AK007673|Mrps14|64659|mitochondrial ribosomal protein S14	AK010242|Mrps14|64659|mitochondrial ribosomal protein S14	AK144195|Mrps14|64659|mitochondrial ribosomal protein S14	AK083352|Mrps14|64659|mitochondrial ribosomal protein S14	NM_025474|Mrps14|64659|mitochondrial ribosomal protein S14	BC044057|Mrps14|64659|mitochondrial ribosomal protein S14
mm9_v1_chr5_-_31482270_31482315	0.00116654	HOX{A6,A7,B6,B7}.p2	AK083636|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	BC034369|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK151300|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK035792|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK043944|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK152439|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK149771|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK159938|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK088596|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK138760|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK004895|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK154056|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta
mm9_v1_chr8_+_124474475_124474479	0.00114888	HOX{A6,A7,B6,B7}.p2	AK170884|Banp|53325|BTG3 associated nuclear protein	AF091234|Banp|53325|BTG3 associated nuclear protein	AF235503|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr7_-_109082300_109082407	0.00112862	HOX{A6,A7,B6,B7}.p2	AK005758|Lrrc51|69358|leucine rich repeat containing 51	NM_001162973|Lrrc51|69358|leucine rich repeat containing 51	NM_027053|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr7_+_53651811_53651938	0.00111337	HOX{A6,A7,B6,B7}.p2	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr2_+_157105002_157105058	0.00108581	HOX{A6,A7,B6,B7}.p2	AK161624|Rpn2|20014|ribophorin II	AK166778|Rpn2|20014|ribophorin II	AK167864|Rpn2|20014|ribophorin II	AK167866|Rpn2|20014|ribophorin II	AK168221|Rpn2|20014|ribophorin II
mm9_v1_chr2_+_179805287_179805329	0.0010296	HOX{A6,A7,B6,B7}.p2	AK163448|Gtpbp5|52856|GTP binding protein 5	AK040689|Gtpbp5|52856|GTP binding protein 5	NM_001083328|Gtpbp5|52856|GTP binding protein 5	NM_001083329|Gtpbp5|52856|GTP binding protein 5	NM_028422|Gtpbp5|52856|GTP binding protein 5	NM_181424|Gtpbp5|52856|GTP binding protein 5	AK013710|Gtpbp5|52856|GTP binding protein 5	BC025144|Gtpbp5|52856|GTP binding protein 5
mm9_v1_chr4_+_148478238_148478288	0.00096471	HOX{A6,A7,B6,B7}.p2	AK039227|Dffa|13347|DNA fragmentation factor, alpha subunit	NM_001025296|Dffa|13347|DNA fragmentation factor, alpha subunit	NM_010044|Dffa|13347|DNA fragmentation factor, alpha subunit	AK154488|Dffa|13347|DNA fragmentation factor, alpha subunit
mm9_v1_chr3_-_108365251_108365316	0.000828844	HOX{A6,A7,B6,B7}.p2	AK046697|Tmem167b|67495|transmembrane protein 167B	BC050932|Tmem167b|67495|transmembrane protein 167B	AK008415|Tmem167b|67495|transmembrane protein 167B	BC055449|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr2_+_31543895_31544075	0.000782329	HOX{A6,A7,B6,B7}.p2	AK083248|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK166210|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK090247|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK166028|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	AK088252|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase	NM_001112703|Abl1|11350|c-abl oncogene 1, non-receptor tyrosine kinase
mm9_v1_chr8_-_108224931_108224989	0.000701786	HOX{A6,A7,B6,B7}.p2	AK171345|Acd|497652|adrenocortical dysplasia	AK160599|Acd|497652|adrenocortical dysplasia	BC138694|Acd|497652|adrenocortical dysplasia	BC138695|Acd|497652|adrenocortical dysplasia	BC145384|Acd|497652|adrenocortical dysplasia	AK032683|Acd|497652|adrenocortical dysplasia	AK145959|Acd|497652|adrenocortical dysplasia	AK171458|Acd|497652|adrenocortical dysplasia	AK052768|Acd|497652|adrenocortical dysplasia
mm9_v1_chr3_+_138189154_138189154	0.000527278	HOX{A6,A7,B6,B7}.p2	NM_007917|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr10_-_79785786_79785871	0.000516203	HOX{A6,A7,B6,B7}.p2	BC052535|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chr7_+_126705221_126705245	0.000377214	HOX{A6,A7,B6,B7}.p2	AK057650|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_001177978|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_146197|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK165353|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK143757|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK165401|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	BC031140|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2
mm9_v1_chr3_-_117571789_117571835	0.000368545	HOX{A6,A7,B6,B7}.p2	AK170966|Snx7|76561|sorting nexin 7	AK052487|Snx7|76561|sorting nexin 7	AK011015|Snx7|76561|sorting nexin 7
mm9_v1_chr12_-_86039703_86039802	0.000334593	HOX{A6,A7,B6,B7}.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr11_+_98273930_98273964	0.000177974	HOX{A6,A7,B6,B7}.p2	AK031099|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK083669|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr5_-_144984391_144984416	0.000138854	HOX{A6,A7,B6,B7}.p2	AK169888|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK170108|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AB093295|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr4_-_108251718_108251734	6.15411e-05	HOX{A6,A7,B6,B7}.p2	CT010186|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm9_v1_chr2_+_26865431_26865598	4.44242e-05	HOX{A6,A7,B6,B7}.p2	AK020041|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK034046|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK039867|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK083582|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK052562|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	NM_029862|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK038728|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK043562|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK040379|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene	AK169470|5930434B04Rik|381356|RIKEN cDNA 5930434B04 gene
mm9_v1_chr1_-_173275736_173275801	8.951e-06	HOX{A6,A7,B6,B7}.p2	AK004988|Nit1|27045|nitrilase 1	BC021634|Nit1|27045|nitrilase 1	AF069988|Nit1|27045|nitrilase 1	AK002269|Nit1|27045|nitrilase 1	AK032189|Nit1|27045|nitrilase 1	NM_012049|Nit1|27045|nitrilase 1
